Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490910 | XP_003598458.2 | 97.120 | 625 | 17 | 1 | 1 | 625 | 1 | 624 | 0.0 | 1262 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490910 | sp|Q0WVD6|ANM3_ARATH | 54.517 | 631 | 217 | 11 | 22 | 624 | 13 | 601 | 0.0 | 639 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490910 | G7IYP7 | 97.120 | 625 | 17 | 1 | 1 | 625 | 1 | 624 | 0.0 | 1262 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0137550 | Msa0490910 | 0.802463 | 5.543829e-49 | -8.615850e-47 |
| Msa0375310 | Msa0490910 | 0.836206 | 1.072043e-56 | -8.615850e-47 |
| Msa0395890 | Msa0490910 | 0.923485 | 2.495092e-89 | -8.615850e-47 |
| Msa0421500 | Msa0490910 | 0.839726 | 1.333620e-57 | -8.615850e-47 |
| Msa0490910 | Msa0513990 | 0.804736 | 1.871964e-49 | -8.615850e-47 |
| Msa0490910 | Msa0945990 | 0.857816 | 1.261668e-62 | -8.615850e-47 |
| Msa0490910 | Msa1213480 | 0.812165 | 4.863561e-51 | -8.615850e-47 |
| Msa0490910 | Msa1300380 | 0.809471 | 1.861747e-50 | -8.615850e-47 |
| Msa0490910 | Msa1418690 | 0.813945 | 1.979640e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490910 | MtrunA17_Chr3g0082021 | 97.120 | 625 | 17 | 1 | 1 | 625 | 1 | 624 | 0.0 | 1262 |
| Msa0490910 | MtrunA17_Chr1g0165131 | 40.312 | 320 | 149 | 8 | 256 | 561 | 78 | 369 | 1.10e-61 | 210 |
| Msa0490910 | MtrunA17_Chr6g0488051 | 38.462 | 312 | 154 | 9 | 257 | 565 | 65 | 341 | 2.12e-58 | 201 |
| Msa0490910 | MtrunA17_Chr2g0306801 | 33.728 | 338 | 166 | 13 | 256 | 566 | 25 | 331 | 3.47e-40 | 150 |
| Msa0490910 | MtrunA17_Chr1g0211591 | 32.292 | 288 | 146 | 9 | 277 | 544 | 1 | 259 | 5.07e-34 | 130 |
| Msa0490910 | MtrunA17_Chr4g0067351 | 31.073 | 354 | 194 | 12 | 229 | 566 | 109 | 428 | 1.40e-33 | 135 |
| Msa0490910 | MtrunA17_Chr2g0295951 | 31.761 | 318 | 178 | 10 | 257 | 566 | 144 | 430 | 7.57e-33 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490910 | AT3G12270.1 | 54.517 | 631 | 217 | 11 | 22 | 624 | 13 | 601 | 0.0 | 639 |
| Msa0490910 | AT2G19670.1 | 38.728 | 346 | 173 | 10 | 257 | 599 | 48 | 357 | 5.43e-64 | 215 |
| Msa0490910 | AT4G29510.1 | 40.385 | 312 | 148 | 9 | 257 | 565 | 72 | 348 | 7.96e-63 | 213 |
| Msa0490910 | AT3G20020.1 | 39.412 | 340 | 144 | 7 | 256 | 561 | 82 | 393 | 1.14e-62 | 214 |
| Msa0490910 | AT3G20020.3 | 39.412 | 340 | 144 | 7 | 256 | 561 | 82 | 393 | 2.30e-62 | 213 |
| Msa0490910 | AT3G20020.2 | 36.765 | 340 | 131 | 7 | 256 | 561 | 82 | 371 | 1.75e-54 | 191 |
| Msa0490910 | AT1G04870.2 | 31.122 | 392 | 193 | 14 | 257 | 617 | 35 | 380 | 5.77e-42 | 156 |
| Msa0490910 | AT3G06930.1 | 32.390 | 318 | 176 | 10 | 257 | 566 | 148 | 434 | 8.07e-35 | 139 |
| Msa0490910 | AT3G06930.2 | 32.390 | 318 | 176 | 10 | 257 | 566 | 148 | 434 | 8.24e-35 | 139 |
| Msa0490910 | AT5G49020.2 | 31.464 | 321 | 175 | 10 | 257 | 566 | 149 | 435 | 7.39e-34 | 136 |
| Msa0490910 | AT5G49020.1 | 31.464 | 321 | 175 | 10 | 257 | 566 | 151 | 437 | 7.92e-34 | 136 |
| Msa0490910 | AT1G04870.1 | 27.273 | 297 | 153 | 12 | 352 | 617 | 13 | 277 | 7.09e-20 | 90.9 |
Find 143 sgRNAs with CRISPR-Local
Find 469 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAATCATCTTGCATAAA+AGG | 0.183353 | 3_4:+12781667 | None:intergenic |
| CCACTTCTACGACTCCTTTC+TGG | 0.198892 | 3_4:+12780182 | None:intergenic |
| AAAGTTAATGAAAGTTATTT+TGG | 0.207730 | 3_4:-12781346 | Msa0490910:CDS |
| TTTCACCGCAACAGCTTCTT+TGG | 0.219398 | 3_4:-12777857 | Msa0490910:CDS |
| CTATAGTTTGTTGCAGGATT+TGG | 0.222527 | 3_4:-12778256 | Msa0490910:intron |
| CACAGACAATCTTAACTTTC+CGG | 0.225094 | 3_4:-12777678 | Msa0490910:CDS |
| GAACCCATTGCCATTGGATT+TGG | 0.227276 | 3_4:-12777655 | Msa0490910:CDS |
| CCTTCAGTGCCAATTGTTTC+CGG | 0.228262 | 3_4:+12777613 | None:intergenic |
| AACCCATTGCCATTGGATTT+GGG | 0.279768 | 3_4:-12777654 | Msa0490910:CDS |
| GGAAGTGCAGGAACTGAAAT+TGG | 0.286446 | 3_4:+12784474 | None:intergenic |
| TCACAAACGTTCTCCCAAAA+TGG | 0.294956 | 3_4:+12778214 | None:intergenic |
| GAGGTACAAGTCTTCCATTT+TGG | 0.302479 | 3_4:-12778228 | Msa0490910:CDS |
| TACCAGTTCCACTATTCTTC+AGG | 0.304524 | 3_4:-12778104 | Msa0490910:intron |
| TTTGGGTCTTACAGTTCATT+TGG | 0.315617 | 3_4:-12781328 | Msa0490910:CDS |
| AAGAATCCCTCTCTGCTAAA+TGG | 0.326618 | 3_4:-12781114 | Msa0490910:CDS |
| TTTCTTCTATAGTTTGTTGC+AGG | 0.327172 | 3_4:-12778262 | Msa0490910:intron |
| CAGCTCAAGCAGGGGCTTCA+AGG | 0.336862 | 3_4:-12780402 | Msa0490910:CDS |
| ATCCAATGGCAATGGGTTCC+CGG | 0.357682 | 3_4:+12777659 | None:intergenic |
| ATCACATTGCAACACATATT+AGG | 0.362480 | 3_4:-12781369 | Msa0490910:CDS |
| GCTAAATGGTGCTGTGGTTA+TGG | 0.363146 | 3_4:-12781100 | Msa0490910:CDS |
| TGACATCAACTATAGGATAT+CGG | 0.365527 | 3_4:+12778146 | None:intergenic |
| GTGATTCTGCAAATCATGTT+TGG | 0.365703 | 3_4:+12781753 | None:intergenic |
| ACAGACAATCTTAACTTTCC+GGG | 0.373070 | 3_4:-12777677 | Msa0490910:CDS |
| TCTATCCTGTTGTGTTAGTT+TGG | 0.374526 | 3_4:-12777322 | Msa0490910:three_prime_UTR |
| AAAACATGTTGCTGGTGTTA+TGG | 0.377230 | 3_4:-12777799 | Msa0490910:CDS |
| GATTTGAAAGACGCAATTTA+CGG | 0.384974 | 3_4:-12781571 | Msa0490910:CDS |
| ACTTATCGATTACAATTAAG+AGG | 0.386604 | 3_4:+12777265 | None:intergenic |
| ATGGACGTCGGCTGTGGAAC+TGG | 0.403171 | 3_4:-12781081 | Msa0490910:CDS |
| GTTGTCCTATGGTTTGATAC+TGG | 0.404254 | 3_4:-12777775 | Msa0490910:CDS |
| CGTGACCGGTATTTGAAGCC+TGG | 0.407812 | 3_4:-12780031 | Msa0490910:CDS |
| AATATGTTCGGCAGTAAAAC+AGG | 0.418992 | 3_4:+12777408 | None:intergenic |
| TCAGATAAGGAACTTGTTAA+CGG | 0.428239 | 3_4:-12781466 | Msa0490910:CDS |
| ATCCACTTCATGGTGCTTCA+TGG | 0.428328 | 3_4:+12777879 | None:intergenic |
| CATGATGTAACTGACTTCAA+TGG | 0.431414 | 3_4:-12781727 | Msa0490910:CDS |
| AACTGGTAACTAAATCTTGA+TGG | 0.438792 | 3_4:+12778119 | None:intergenic |
| TTGGATTTGGGGAAGAAAAC+GGG | 0.442610 | 3_4:-12777642 | Msa0490910:CDS |
| AGATGCCACTGCTGCCATCT+TGG | 0.443421 | 3_4:+12780357 | None:intergenic |
| AAGAACAACAATGGGACGAT+TGG | 0.443965 | 3_4:-12784549 | Msa0490910:CDS |
| TCAATGGGATTAAGCCTTTG+TGG | 0.447033 | 3_4:-12781711 | Msa0490910:CDS |
| TGTTCTTGTTCAACTGTGTA+TGG | 0.447784 | 3_4:+12784601 | None:intergenic |
| GATGGCAGCAGTGGCATCTC+AGG | 0.448831 | 3_4:-12780353 | Msa0490910:intron |
| ATTGGATTTGGGGAAGAAAA+CGG | 0.449649 | 3_4:-12777643 | Msa0490910:CDS |
| CAATGGGATTAAGCCTTTGT+GGG | 0.450013 | 3_4:-12781710 | Msa0490910:CDS |
| GTGACCGGTATTTGAAGCCT+GGG | 0.451630 | 3_4:-12780030 | Msa0490910:CDS |
| TTCCGGGAACCCATTGCCAT+TGG | 0.454934 | 3_4:-12777661 | Msa0490910:CDS |
| AGTTGCTGTGTCGGGAAGAA+TGG | 0.455428 | 3_4:+12780003 | None:intergenic |
| CAAGTGCGTCTCCGACCATC+AGG | 0.460891 | 3_4:+12777496 | None:intergenic |
| GGGACAAAACCGGAAACAAT+TGG | 0.463028 | 3_4:-12777622 | Msa0490910:CDS |
| AACCTGAAGAATAGTGGAAC+TGG | 0.464724 | 3_4:+12778102 | None:intergenic |
| CGCAAATCAATCTTCACAGC+AGG | 0.465652 | 3_4:+12777586 | None:intergenic |
| TGGTCTATGACATCAACTAT+AGG | 0.466424 | 3_4:+12778139 | None:intergenic |
| GACATCAACTATAGGATATC+GGG | 0.467340 | 3_4:+12778147 | None:intergenic |
| AGACGAAGAAGAACAACAAT+GGG | 0.468141 | 3_4:-12784557 | Msa0490910:CDS |
| GGAAGAAAACGGGACAAAAC+CGG | 0.471450 | 3_4:-12777632 | Msa0490910:CDS |
| CAGATAAGGAACTTGTTAAC+GGG | 0.472965 | 3_4:-12781465 | Msa0490910:CDS |
| TTTGTTGCAGGATTTGGAAA+AGG | 0.474514 | 3_4:-12778250 | Msa0490910:CDS |
| AGGCTAGAATGGATGCTTAC+GGG | 0.475663 | 3_4:-12781149 | Msa0490910:CDS |
| AAAATTCTAAAACATGTTGC+TGG | 0.477619 | 3_4:-12777807 | Msa0490910:CDS |
| TTTGACCAAACTAACACAAC+AGG | 0.478061 | 3_4:+12777317 | None:intergenic |
| TCGAGAGATGTTAAGTGATA+AGG | 0.479049 | 3_4:-12781299 | Msa0490910:intron |
| TCCCCAAATCCAATGGCAAT+GGG | 0.479745 | 3_4:+12777652 | None:intergenic |
| TTGCGGTGAAATCCACTTCA+TGG | 0.482299 | 3_4:+12777869 | None:intergenic |
| AAAAGCGAAACTAGAGTCAA+TGG | 0.482482 | 3_4:-12780208 | Msa0490910:CDS |
| CTGATGGTCGGAGACGCACT+TGG | 0.483332 | 3_4:-12777495 | Msa0490910:CDS |
| ATTGATAAGAATCGAGAAGA+AGG | 0.483613 | 3_4:-12781415 | Msa0490910:CDS |
| TTCCCCAAATCCAATGGCAA+TGG | 0.484968 | 3_4:+12777651 | None:intergenic |
| TTGATGTATTGTTAAGTGAA+TGG | 0.485877 | 3_4:-12780105 | Msa0490910:CDS |
| AACTTTGGTGAATTTGAAGA+AGG | 0.486916 | 3_4:-12781637 | Msa0490910:CDS |
| TTGCTATATGAATCCATGCT+TGG | 0.487442 | 3_4:-12780070 | Msa0490910:CDS |
| CTCACAATAGTTGCTGTGTC+GGG | 0.491195 | 3_4:+12779995 | None:intergenic |
| ACTTACACCAGCAGCTTCCA+TGG | 0.492375 | 3_4:+12777519 | None:intergenic |
| TGTTAGAAATTCTCTCAACT+TGG | 0.496020 | 3_4:-12784407 | Msa0490910:CDS |
| CTTGCCTAGTTCCTCAGATA+AGG | 0.496629 | 3_4:-12781479 | Msa0490910:CDS |
| GATTCATTGCTGTACAACTT+TGG | 0.498902 | 3_4:-12781652 | Msa0490910:CDS |
| AGAACAACAATGGGACGATT+GGG | 0.501820 | 3_4:-12784548 | Msa0490910:CDS |
| GCTGTGGAACTGGCATCCTC+AGG | 0.503024 | 3_4:-12781071 | Msa0490910:intron |
| GAGAGCAGATGTTGGAGTTG+TGG | 0.503025 | 3_4:-12781790 | Msa0490910:CDS |
| CGTAGAAGTGGTTCATGGTA+TGG | 0.506163 | 3_4:-12780170 | Msa0490910:CDS |
| GGTGTTATGGAGTTGTCCTA+TGG | 0.510283 | 3_4:-12777786 | Msa0490910:CDS |
| TAGGCTAGAATGGATGCTTA+CGG | 0.510366 | 3_4:-12781150 | Msa0490910:CDS |
| GATTTACAACTAGATTCTGC+CGG | 0.516034 | 3_4:-12777753 | Msa0490910:CDS |
| GGGGATGTTGACAGCACAGC+TGG | 0.518510 | 3_4:+12777724 | None:intergenic |
| GTGGTTATGGACGTCGGCTG+TGG | 0.518806 | 3_4:-12781087 | Msa0490910:CDS |
| AGCTCAAGCAGGGGCTTCAA+GGG | 0.522466 | 3_4:-12780401 | Msa0490910:CDS |
| GGCACAAACCTGAAGAATAG+TGG | 0.525375 | 3_4:+12778096 | None:intergenic |
| GGAGTCGTAGAAGTGGTTCA+TGG | 0.526179 | 3_4:-12780175 | Msa0490910:CDS |
| CCGGAAACAATTGGCACTGA+AGG | 0.532793 | 3_4:-12777613 | Msa0490910:CDS |
| GATGAAGAGAAGCACAATGT+TGG | 0.533797 | 3_4:+12784446 | None:intergenic |
| ATGATGTAACTGACTTCAAT+GGG | 0.536664 | 3_4:-12781726 | Msa0490910:CDS |
| CATTAACTATATTCGTTCCA+AGG | 0.537597 | 3_4:-12784362 | Msa0490910:intron |
| TGTATTGTTAAGTGAATGGA+TGG | 0.541095 | 3_4:-12780101 | Msa0490910:CDS |
| ATCCTACCAGACCTTTGACT+TGG | 0.543164 | 3_4:-12777905 | Msa0490910:intron |
| GACATTTCCATGGAAGCTGC+TGG | 0.547329 | 3_4:-12777526 | Msa0490910:CDS |
| TCGCAGCATTGACATTTCCA+TGG | 0.548287 | 3_4:-12777536 | Msa0490910:CDS |
| ACAGCACAGCTGGTGTATCC+CGG | 0.549263 | 3_4:+12777734 | None:intergenic |
| TTACAATTAAGAGGCAAAAG+AGG | 0.552055 | 3_4:+12777274 | None:intergenic |
| ACCCATTGCCATTGGATTTG+GGG | 0.554541 | 3_4:-12777653 | Msa0490910:CDS |
| ACTCACAATAGTTGCTGTGT+CGG | 0.555220 | 3_4:+12779994 | None:intergenic |
| CAGTGCTTTATGCACGTGAC+CGG | 0.559254 | 3_4:-12780045 | Msa0490910:CDS |
| TGACATGTCTTGCATTGGGG+AGG | 0.560880 | 3_4:-12778188 | Msa0490910:CDS |
| CTCTCTGCTAAATGGTGCTG+TGG | 0.560984 | 3_4:-12781106 | Msa0490910:CDS |
| AGTTGAGGCTAGTGCCAAGA+TGG | 0.562069 | 3_4:-12780371 | Msa0490910:CDS |
| AGAGTCAATGGCAACCAGAA+AGG | 0.562757 | 3_4:-12780196 | Msa0490910:CDS |
| ATGTTGGAACAAGGAAGTGC+AGG | 0.564814 | 3_4:+12784462 | None:intergenic |
| TAAATCCAGTATCAAACCAT+AGG | 0.566573 | 3_4:+12777770 | None:intergenic |
| TTCAAGGGTCATTGCAGTTG+AGG | 0.568402 | 3_4:-12780386 | Msa0490910:CDS |
| ATTTACAACTAGATTCTGCC+GGG | 0.570970 | 3_4:-12777752 | Msa0490910:CDS |
| AGTTCCTTATCTGAGGAACT+AGG | 0.571202 | 3_4:+12781475 | None:intergenic |
| GCTGCTGGTGTAAGTCCTGA+TGG | 0.574483 | 3_4:-12777511 | Msa0490910:CDS |
| AAGACGAAGAAGAACAACAA+TGG | 0.579780 | 3_4:-12784558 | Msa0490910:CDS |
| GTTAACAAGTTCCTTATCTG+AGG | 0.586317 | 3_4:+12781468 | None:intergenic |
| CCTCACAAGATCTTCATCCA+TGG | 0.589189 | 3_4:+12781594 | None:intergenic |
| AGATGAAGAAACTTCAACCA+TGG | 0.589472 | 3_4:-12781611 | Msa0490910:CDS |
| TAGTGCCAAGATGGCAGCAG+TGG | 0.596391 | 3_4:-12780362 | Msa0490910:CDS |
| ACAGCACCATTTAGCAGAGA+GGG | 0.596424 | 3_4:+12781108 | None:intergenic |
| GTTGCAGGATTTGGAAAAGG+AGG | 0.599248 | 3_4:-12778247 | Msa0490910:CDS |
| TGCTGCGATGCTCAGTAGAA+CGG | 0.600832 | 3_4:+12777551 | None:intergenic |
| TGACCGGTATTTGAAGCCTG+GGG | 0.601711 | 3_4:-12780029 | Msa0490910:CDS |
| CTGGTGTAAGTCCTGATGGT+CGG | 0.603021 | 3_4:-12777507 | Msa0490910:CDS |
| AGGTGGCAGAGAGCAGATGT+TGG | 0.604238 | 3_4:-12781798 | Msa0490910:CDS |
| TTGATAAGAATCGAGAAGAA+GGG | 0.611350 | 3_4:-12781414 | Msa0490910:CDS |
| CCATGGATGAAGATCTTGTG+AGG | 0.612648 | 3_4:-12781594 | Msa0490910:CDS |
| TGGTTCCAAAGAAGCTGTTG+CGG | 0.612908 | 3_4:+12777852 | None:intergenic |
| CCAGAAAGGAGTCGTAGAAG+TGG | 0.615028 | 3_4:-12780182 | Msa0490910:CDS |
| TACCATGAAGCACCATGAAG+TGG | 0.618767 | 3_4:-12777881 | Msa0490910:CDS |
| GACAGAATATCAAGTACATG+TGG | 0.624027 | 3_4:+12777356 | None:intergenic |
| TAAGGAACTTGTTAACGGGA+AGG | 0.625119 | 3_4:-12781461 | Msa0490910:CDS |
| CTTCATGGTAGCCAAGTCAA+AGG | 0.631303 | 3_4:+12777894 | None:intergenic |
| CTTACACTCCGAAAACACAT+TGG | 0.636031 | 3_4:-12777702 | Msa0490910:CDS |
| CATGGATGAAGATCTTGTGA+GGG | 0.645841 | 3_4:-12781593 | Msa0490910:CDS |
| TGTGTTGCAATGTGATTCTG+AGG | 0.646033 | 3_4:+12781376 | None:intergenic |
| AGAAGCACAATGTTGGAACA+AGG | 0.650060 | 3_4:+12784453 | None:intergenic |
| TATCACTTAACATCTCTCGA+TGG | 0.658911 | 3_4:+12781302 | None:intergenic |
| ATAAAGCACTGAGCCAAGCA+TGG | 0.659169 | 3_4:+12780057 | None:intergenic |
| TATTTATCGTCGTCCCACAA+AGG | 0.660086 | 3_4:+12781697 | None:intergenic |
| CACAGCACCATTTAGCAGAG+AGG | 0.673529 | 3_4:+12781107 | None:intergenic |
| GCAAATCAATCTTCACAGCA+GGG | 0.679118 | 3_4:+12777587 | None:intergenic |
| AACAATACATCAACACTGTG+AGG | 0.681464 | 3_4:+12780115 | None:intergenic |
| GGTGCTGTGGTTATGGACGT+CGG | 0.684795 | 3_4:-12781093 | Msa0490910:CDS |
| GTTAACGGGAAGGACTCAAG+AGG | 0.689762 | 3_4:-12781451 | Msa0490910:CDS |
| GACCGGTATTTGAAGCCTGG+GGG | 0.694447 | 3_4:-12780028 | Msa0490910:CDS |
| GACGATTGGGAAGAAAACGA+AGG | 0.726813 | 3_4:-12784535 | Msa0490910:CDS |
| GTATTGTTAAGTGAATGGAT+GGG | 0.772028 | 3_4:-12780100 | Msa0490910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTACTATATTATAAATTT+CGG | - | chr3_4:12780049-12780068 | Msa0490910:CDS | 10.0% |
| !!! | AATTAAATTGTATGTTTTAT+AGG | + | chr3_4:12782885-12782904 | None:intergenic | 10.0% |
| !! | GATATATAAAAAAAAAATAG+AGG | - | chr3_4:12783082-12783101 | Msa0490910:intron | 10.0% |
| !!! | GGATTTTAATTAAAATATTA+AGG | - | chr3_4:12783113-12783132 | Msa0490910:intron | 10.0% |
| !!! | TGGTTTTTATTTTTATTTAT+CGG | - | chr3_4:12784551-12784570 | Msa0490910:CDS | 10.0% |
| !! | AAATACAAAAACTATCAAAA+GGG | + | chr3_4:12777612-12777631 | None:intergenic | 15.0% |
| !! | AAAATACAAAAACTATCAAA+AGG | + | chr3_4:12777613-12777632 | None:intergenic | 15.0% |
| !!! | TTCTAGAATTGAAAATTTAT+TGG | - | chr3_4:12778609-12778628 | Msa0490910:intron | 15.0% |
| !!! | TATTTTCAAACATAGAAAAA+TGG | + | chr3_4:12778741-12778760 | None:intergenic | 15.0% |
| !! | AAATGAAAGAGATAAAAAAA+TGG | - | chr3_4:12779001-12779020 | Msa0490910:intron | 15.0% |
| !!! | CAAATTAAGAATATTTTTGT+TGG | - | chr3_4:12779413-12779432 | Msa0490910:intron | 15.0% |
| !!! | TTTTGTGCTTTATAAATTTA+AGG | - | chr3_4:12779440-12779459 | Msa0490910:intron | 15.0% |
| !! | AAGCAGAAAAATATAAAAAA+TGG | - | chr3_4:12779847-12779866 | Msa0490910:intron | 15.0% |
| !!! | AAAGTTAATGAAAGTTATTT+TGG | - | chr3_4:12780591-12780610 | Msa0490910:intron | 15.0% |
| !!! | AAGTTAATGAAAGTTATTTT+GGG | - | chr3_4:12780592-12780611 | Msa0490910:intron | 15.0% |
| !!! | TTTTCTTCAAATTTTAATTC+AGG | - | chr3_4:12781677-12781696 | Msa0490910:CDS | 15.0% |
| !!! | AAAAATTAAATAGTTCTAGA+TGG | + | chr3_4:12781984-12782003 | None:intergenic | 15.0% |
| !! | AAATTACAATTAGAATAAGA+TGG | + | chr3_4:12782276-12782295 | None:intergenic | 15.0% |
| !! | TAAATGTAAAATGACATAAA+AGG | - | chr3_4:12782617-12782636 | Msa0490910:intron | 15.0% |
| !! | TAACAAATTTATTCACTAAA+AGG | - | chr3_4:12782654-12782673 | Msa0490910:intron | 15.0% |
| !!! | ATATTTTTTTAATTGATGGA+TGG | - | chr3_4:12782736-12782755 | Msa0490910:intron | 15.0% |
| !! | AGTAGAAATATTAAAATGAT+TGG | + | chr3_4:12782769-12782788 | None:intergenic | 15.0% |
| !! | ATTTACTCAACTAATATAAT+AGG | - | chr3_4:12782817-12782836 | Msa0490910:intron | 15.0% |
| !!! | ATAGGAAACTTTTTTTTTAA+AGG | - | chr3_4:12782835-12782854 | Msa0490910:intron | 15.0% |
| !!! | TTTATTTTCAATTTCTCATT+GGG | + | chr3_4:12783024-12783043 | None:intergenic | 15.0% |
| !!! | TTTTATTTTCAATTTCTCAT+TGG | + | chr3_4:12783025-12783044 | None:intergenic | 15.0% |
| !! | TTTATTACTGTTGTATAAAA+GGG | + | chr3_4:12783410-12783429 | None:intergenic | 15.0% |
| !! | AAAATAAAAACCAATATGTT+CGG | + | chr3_4:12784544-12784563 | None:intergenic | 15.0% |
| !!! | TTTTATAATCCGTAACAAAT+GGG | + | chr3_4:12777674-12777693 | None:intergenic | 20.0% |
| !!! | TTTTTATAATCCGTAACAAA+TGG | + | chr3_4:12777675-12777694 | None:intergenic | 20.0% |
| !! | TATTATTCATAAGCTTATCA+AGG | + | chr3_4:12777914-12777933 | None:intergenic | 20.0% |
| !!! | TATCCAAAATCAATTTTACA+TGG | + | chr3_4:12778966-12778985 | None:intergenic | 20.0% |
| !!! | TTTTATCTCTTTCATTTTCT+CGG | + | chr3_4:12778998-12779017 | None:intergenic | 20.0% |
| !!! | AATAAGTGTATTTTGATGTT+GGG | - | chr3_4:12779024-12779043 | Msa0490910:intron | 20.0% |
| !!! | TTTGTGCTTTTATCAATTTA+AGG | - | chr3_4:12779158-12779177 | Msa0490910:intron | 20.0% |
| !! | AAATACTTATTGTGTATGTT+TGG | - | chr3_4:12779265-12779284 | Msa0490910:intron | 20.0% |
| !!! | CTAAAATTGATTTTGACATT+TGG | + | chr3_4:12779742-12779761 | None:intergenic | 20.0% |
| !!! | CAAATGTCAAAATCAATTTT+AGG | - | chr3_4:12779740-12779759 | Msa0490910:intron | 20.0% |
| !!! | ATTAACTACCAATTTTTTCA+CGG | + | chr3_4:12780406-12780425 | None:intergenic | 20.0% |
| !!! | AAAATGTACTTCTCATTTTT+TGG | - | chr3_4:12780664-12780683 | Msa0490910:intron | 20.0% |
| !!! | AGTTACAACTATTTTTATGT+AGG | - | chr3_4:12780768-12780787 | Msa0490910:intron | 20.0% |
| !! | ATATAGTAACCTATCAATTT+GGG | + | chr3_4:12781349-12781368 | None:intergenic | 20.0% |
| !! | TATATAGTAACCTATCAATT+TGG | + | chr3_4:12781350-12781369 | None:intergenic | 20.0% |
| !!! | TTCTTATGTTAGTTGATTTT+AGG | - | chr3_4:12781373-12781392 | Msa0490910:CDS | 20.0% |
| !!! | ATGAAGTACATTTAATCTTT+TGG | - | chr3_4:12781425-12781444 | Msa0490910:CDS | 20.0% |
| !!! | TGAAGTACATTTAATCTTTT+GGG | - | chr3_4:12781426-12781445 | Msa0490910:CDS | 20.0% |
| !!! | TTTTTCAAGTAAAAAACACT+TGG | - | chr3_4:12782234-12782253 | Msa0490910:intron | 20.0% |
| !! | AAAAAAAACTGAAACATTGA+TGG | - | chr3_4:12782985-12783004 | Msa0490910:intron | 20.0% |
| !! | GTTTATTACTGTTGTATAAA+AGG | + | chr3_4:12783411-12783430 | None:intergenic | 20.0% |
| !!! | GATTTTTCTGATATTTTGTT+CGG | - | chr3_4:12783592-12783611 | Msa0490910:intron | 20.0% |
| !!! | ATTTTTCTGATATTTTGTTC+GGG | - | chr3_4:12783593-12783612 | Msa0490910:intron | 20.0% |
| !! | ATATAAGAAAATAAGATCAC+AGG | + | chr3_4:12783624-12783643 | None:intergenic | 20.0% |
| !! | ACATATTTACATTACACAAA+GGG | + | chr3_4:12783865-12783884 | None:intergenic | 20.0% |
| !! | AACATATTTACATTACACAA+AGG | + | chr3_4:12783866-12783885 | None:intergenic | 20.0% |
| !! | CATACAGTTAATTATCAAAA+AGG | + | chr3_4:12783918-12783937 | None:intergenic | 20.0% |
| !!! | TGATTTTGATGCTTATTTGT+TGG | - | chr3_4:12777698-12777717 | Msa0490910:CDS | 25.0% |
| !!! | TGACTAGTTTTAATCACTTA+TGG | + | chr3_4:12777994-12778013 | None:intergenic | 25.0% |
| !!! | CACATTTTTTAGTTGGTTTT+AGG | - | chr3_4:12778014-12778033 | Msa0490910:intron | 25.0% |
| ! | ATAAGTTGTTTATCGAAACA+GGG | + | chr3_4:12778040-12778059 | None:intergenic | 25.0% |
| ! | AATAAGTTGTTTATCGAAAC+AGG | + | chr3_4:12778041-12778060 | None:intergenic | 25.0% |
| !! | CTTGATTTTATCTTTCTCTA+TGG | + | chr3_4:12778122-12778141 | None:intergenic | 25.0% |
| ! | AAAAACCCTTTAATGTTTAG+CGG | - | chr3_4:12778309-12778328 | Msa0490910:intron | 25.0% |
| ! | AAAGAAAACAACAGAATTTG+TGG | - | chr3_4:12778372-12778391 | Msa0490910:intron | 25.0% |
| ! | ACAAATACTTAGTGTATGTT+TGG | - | chr3_4:12778448-12778467 | Msa0490910:intron | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | - | chr3_4:12778515-12778534 | Msa0490910:intron | 25.0% |
| ! | CAAGTTAAAATCAATTCTGT+AGG | + | chr3_4:12778566-12778585 | None:intergenic | 25.0% |
| !!! | TTTAACTTGAAGCTAGAAAT+TGG | - | chr3_4:12778577-12778596 | Msa0490910:intron | 25.0% |
| !!! | TTAATTTGTGTATGTTGGAT+TGG | - | chr3_4:12778688-12778707 | Msa0490910:intron | 25.0% |
| !!! | AATGTTTGAATGAGTTGATA+TGG | - | chr3_4:12778883-12778902 | Msa0490910:intron | 25.0% |
| ! | AACAAAACACACAATTTGTA+TGG | + | chr3_4:12778910-12778929 | None:intergenic | 25.0% |
| !!! | GAATAAGTGTATTTTGATGT+TGG | - | chr3_4:12779023-12779042 | Msa0490910:intron | 25.0% |
| !!! | TATTTTGATGTTGGGATTTT+GGG | - | chr3_4:12779032-12779051 | Msa0490910:intron | 25.0% |
| ! | GTCAATAGAAATGAAATTGA+AGG | - | chr3_4:12779070-12779089 | Msa0490910:intron | 25.0% |
| ! | TAAGGATTGAATGATTCAAT+AGG | - | chr3_4:12779458-12779477 | Msa0490910:intron | 25.0% |
| !! | ATGTTTGGTTTCAATTTCAT+GGG | + | chr3_4:12779787-12779806 | None:intergenic | 25.0% |
| !! | TATGTTTGGTTTCAATTTCA+TGG | + | chr3_4:12779788-12779807 | None:intergenic | 25.0% |
| ! | TATTATAAATTTCGGTTGAC+TGG | - | chr3_4:12780057-12780076 | Msa0490910:CDS | 25.0% |
| ! | AATGAATCATCTTGCATAAA+AGG | + | chr3_4:12780273-12780292 | None:intergenic | 25.0% |
| !!! | TATTTTTATGTAGGCTAGAA+TGG | - | chr3_4:12780777-12780796 | Msa0490910:intron | 25.0% |
| ! | TAAAAGCCAGAATAATACAT+GGG | + | chr3_4:12781258-12781277 | None:intergenic | 25.0% |
| ! | ATAAAAGCCAGAATAATACA+TGG | + | chr3_4:12781259-12781278 | None:intergenic | 25.0% |
| !!! | ATTATTCTGGCTTTTATTAG+TGG | - | chr3_4:12781262-12781281 | Msa0490910:intron | 25.0% |
| !! | GAAGTACATTTAATCTTTTG+GGG | - | chr3_4:12781427-12781446 | Msa0490910:CDS | 25.0% |
| ! | AAAGATTGAGCAATCAAATA+TGG | + | chr3_4:12781468-12781487 | None:intergenic | 25.0% |
| ! | TTGATGTATTGTTAAGTGAA+TGG | - | chr3_4:12781832-12781851 | Msa0490910:intron | 25.0% |
| !!! | ACATTAAAATTTTAAGGCTG+TGG | - | chr3_4:12782186-12782205 | Msa0490910:intron | 25.0% |
| ! | TATACAACAACAATAAACGA+GGG | - | chr3_4:12782342-12782361 | Msa0490910:intron | 25.0% |
| !! | TATAAGCTAATTGAAGTGTT+TGG | - | chr3_4:12782570-12782589 | Msa0490910:intron | 25.0% |
| ! | AAAAAAATAGAGGGTAAAAG+TGG | - | chr3_4:12783092-12783111 | Msa0490910:intron | 25.0% |
| !! | TTTTTCTGATATTTTGTTCG+GGG | - | chr3_4:12783594-12783613 | Msa0490910:intron | 25.0% |
| ! | ACAAACTATAGAAGAAAAAC+TGG | + | chr3_4:12783672-12783691 | None:intergenic | 25.0% |
| !!! | AAAATTCTAAAACATGTTGC+TGG | - | chr3_4:12784130-12784149 | Msa0490910:intron | 25.0% |
| TGTTAGAAATTCTCTCAACT+TGG | - | chr3_4:12777530-12777549 | Msa0490910:CDS | 30.0% | |
| CATTAACTATATTCGTTCCA+AGG | - | chr3_4:12777575-12777594 | Msa0490910:CDS | 30.0% | |
| !!! | GCTTATTTGTTGGTTTTAGT+TGG | - | chr3_4:12777708-12777727 | Msa0490910:CDS | 30.0% |
| ATAAGCTGTTTATCCAAACA+GGG | + | chr3_4:12777741-12777760 | None:intergenic | 30.0% | |
| TATAAGCTGTTTATCCAAAC+AGG | + | chr3_4:12777742-12777761 | None:intergenic | 30.0% | |
| TATAGCACAAACACTTAAGA+CGG | - | chr3_4:12777758-12777777 | Msa0490910:CDS | 30.0% | |
| !!! | CTAGTCACACATTTTTTAGT+TGG | - | chr3_4:12778007-12778026 | Msa0490910:intron | 30.0% |
| !! | ATGCTATAAGCTGTTTTCAT+AGG | - | chr3_4:12778159-12778178 | Msa0490910:CDS | 30.0% |
| ATCTATTTGAGCTTATCTAC+TGG | + | chr3_4:12778283-12778302 | None:intergenic | 30.0% | |
| ! | GCTAAACATTAAAGGGTTTT+TGG | + | chr3_4:12778310-12778329 | None:intergenic | 30.0% |
| AGTGAGAGAAAATGAAAGAA+AGG | - | chr3_4:12778349-12778368 | Msa0490910:intron | 30.0% | |
| !! | GAGTTTGATGATGAGATTAT+GGG | - | chr3_4:12778394-12778413 | Msa0490910:intron | 30.0% |
| !!! | AATTTTGGTTACTCCAAAAG+TGG | + | chr3_4:12778476-12778495 | None:intergenic | 30.0% |
| ! | GTAACCAAAATTGATTCTAG+AGG | - | chr3_4:12778484-12778503 | Msa0490910:intron | 30.0% |
| !!! | TACACCTCTAGAATCAATTT+TGG | + | chr3_4:12778491-12778510 | None:intergenic | 30.0% |
| ! | ATGAGCTAAAATTGATTCCA+CGG | + | chr3_4:12778669-12778688 | None:intergenic | 30.0% |
| !! | GCTCATTAATTTGTGTATGT+TGG | - | chr3_4:12778683-12778702 | Msa0490910:intron | 30.0% |
| AGCATATAGCATGCAAATTT+AGG | - | chr3_4:12778826-12778845 | Msa0490910:intron | 30.0% | |
| GCATATAGCATGCAAATTTA+GGG | - | chr3_4:12778827-12778846 | Msa0490910:intron | 30.0% | |
| !! | CAAATTGTGTGTTTTGTTCT+TGG | - | chr3_4:12778912-12778931 | Msa0490910:intron | 30.0% |
| !! | GAGCCATGTAAAATTGATTT+TGG | - | chr3_4:12778960-12778979 | Msa0490910:intron | 30.0% |
| !!! | GTATTTTGATGTTGGGATTT+TGG | - | chr3_4:12779031-12779050 | Msa0490910:intron | 30.0% |
| !! | ATTTTGATGTTGGGATTTTG+GGG | - | chr3_4:12779033-12779052 | Msa0490910:intron | 30.0% |
| !! | TTCTATTGACTCAATTTCCT+AGG | + | chr3_4:12779060-12779079 | None:intergenic | 30.0% |
| AGTACTTAGCATGCAAATTT+AGG | - | chr3_4:12779119-12779138 | Msa0490910:intron | 30.0% | |
| GTACTTAGCATGCAAATTTA+GGG | - | chr3_4:12779120-12779139 | Msa0490910:intron | 30.0% | |
| GCAAATTTAGGGATTTATGT+TGG | - | chr3_4:12779131-12779150 | Msa0490910:intron | 30.0% | |
| CTTATTGTGTATGTTTGGAT+TGG | - | chr3_4:12779270-12779289 | Msa0490910:intron | 30.0% | |
| !! | AAGTGATTTTGGTGAAATCA+TGG | - | chr3_4:12779293-12779312 | Msa0490910:intron | 30.0% |
| TAGCTTCTTAGTTAGAACTT+AGG | - | chr3_4:12779675-12779694 | Msa0490910:intron | 30.0% | |
| !! | CATTGCTTTTGACTCTAAAA+TGG | + | chr3_4:12779703-12779722 | None:intergenic | 30.0% |
| AAAGGTCAGAACAAGTAAAT+TGG | + | chr3_4:12779971-12779990 | None:intergenic | 30.0% | |
| TTGCTAGCTGAAAATGAAAA+AGG | + | chr3_4:12779989-12780008 | None:intergenic | 30.0% | |
| ! | ATGATGTAACTGACTTCAAT+GGG | - | chr3_4:12780211-12780230 | Msa0490910:CDS | 30.0% |
| AACTTTGGTGAATTTGAAGA+AGG | - | chr3_4:12780300-12780319 | Msa0490910:intron | 30.0% | |
| GATTTGAAAGACGCAATTTA+CGG | - | chr3_4:12780366-12780385 | Msa0490910:CDS | 30.0% | |
| !! | TCAGATAAGGAACTTGTTAA+CGG | - | chr3_4:12780471-12780490 | Msa0490910:intron | 30.0% |
| ATTGATAAGAATCGAGAAGA+AGG | - | chr3_4:12780522-12780541 | Msa0490910:intron | 30.0% | |
| TTGATAAGAATCGAGAAGAA+GGG | - | chr3_4:12780523-12780542 | Msa0490910:intron | 30.0% | |
| ATCACATTGCAACACATATT+AGG | - | chr3_4:12780568-12780587 | Msa0490910:intron | 30.0% | |
| !!! | ACTTCTCATTTTTTGGTTTC+AGG | - | chr3_4:12780671-12780690 | Msa0490910:intron | 30.0% |
| !! | TTGGTTTCAGGTTTGAATAA+AGG | - | chr3_4:12780683-12780702 | Msa0490910:intron | 30.0% |
| TCTTCCAAACAAATTAACCA+AGG | - | chr3_4:12780969-12780988 | Msa0490910:intron | 30.0% | |
| !! | AACACCTTGGTTAATTTGTT+TGG | + | chr3_4:12780976-12780995 | None:intergenic | 30.0% |
| TATATTTCTCAGAAACACCT+TGG | + | chr3_4:12780989-12781008 | None:intergenic | 30.0% | |
| TTATTGAAAATACCGAGAAC+AGG | - | chr3_4:12781037-12781056 | Msa0490910:intron | 30.0% | |
| !!! | GTAATTTTTTCTCCTGTTCT+CGG | + | chr3_4:12781052-12781071 | None:intergenic | 30.0% |
| GAGAAAAAATTACAGTCCAA+GGG | - | chr3_4:12781059-12781078 | Msa0490910:intron | 30.0% | |
| ATTACTGTGGTCTAAATAAC+TGG | + | chr3_4:12781156-12781175 | None:intergenic | 30.0% | |
| ATTACAGTTAGAGTCTACAA+GGG | + | chr3_4:12781195-12781214 | None:intergenic | 30.0% | |
| AATTACAGTTAGAGTCTACA+AGG | + | chr3_4:12781196-12781215 | None:intergenic | 30.0% | |
| CCATACAATAAGTCAAAACA+GGG | + | chr3_4:12781288-12781307 | None:intergenic | 30.0% | |
| ACCATACAATAAGTCAAAAC+AGG | + | chr3_4:12781289-12781308 | None:intergenic | 30.0% | |
| ! | CTATCAATTTGGGTTTGTAT+AGG | + | chr3_4:12781339-12781358 | None:intergenic | 30.0% |
| CTATACAAACCCAAATTGAT+AGG | - | chr3_4:12781337-12781356 | Msa0490910:CDS | 30.0% | |
| GAAGAAAAACAAAGTTAGCA+AGG | + | chr3_4:12781665-12781684 | None:intergenic | 30.0% | |
| !! | ATTCAGGTTGCCAAAAATAA+CGG | - | chr3_4:12781693-12781712 | Msa0490910:CDS | 30.0% |
| TGTATTGTTAAGTGAATGGA+TGG | - | chr3_4:12781836-12781855 | Msa0490910:intron | 30.0% | |
| GTATTGTTAAGTGAATGGAT+GGG | - | chr3_4:12781837-12781856 | Msa0490910:intron | 30.0% | |
| !! | AATAGTTCTAGATGGAATGA+AGG | + | chr3_4:12781976-12781995 | None:intergenic | 30.0% |
| ! | TTTTACTGTAGTAGTTGTTG+TGG | - | chr3_4:12782079-12782098 | Msa0490910:intron | 30.0% |
| AAAACACTTGGAACAACATT+TGG | - | chr3_4:12782246-12782265 | Msa0490910:intron | 30.0% | |
| GTATACAACAACAATAAACG+AGG | - | chr3_4:12782341-12782360 | Msa0490910:intron | 30.0% | |
| ATACAACAACAATAAACGAG+GGG | - | chr3_4:12782343-12782362 | Msa0490910:intron | 30.0% | |
| ! | GAAGTGTTTGGTAAAATTAG+CGG | - | chr3_4:12782582-12782601 | Msa0490910:intron | 30.0% |
| ! | TTTAATTGATGGATGGTCAA+AGG | - | chr3_4:12782743-12782762 | Msa0490910:intron | 30.0% |
| GAGAGTAACGTTTAAATACT+TGG | + | chr3_4:12783059-12783078 | None:intergenic | 30.0% | |
| GTATTTAAACGTTACTCTCT+CGG | - | chr3_4:12783060-12783079 | Msa0490910:intron | 30.0% | |
| AAAAATAGCTTATAAGCTCG+TGG | - | chr3_4:12783203-12783222 | Msa0490910:intron | 30.0% | |
| TTGACAAAAAAAGCTCTGTT+TGG | + | chr3_4:12783272-12783291 | None:intergenic | 30.0% | |
| CTATAAGCTATAAGCTCATT+TGG | - | chr3_4:12783305-12783324 | Msa0490910:intron | 30.0% | |
| CTTATCTCATTAAGTAGTGT+CGG | - | chr3_4:12783445-12783464 | Msa0490910:intron | 30.0% | |
| !!! | TCTTGCTATAACGTTTTTTG+TGG | - | chr3_4:12783532-12783551 | Msa0490910:intron | 30.0% |
| !! | TTTCTTCTATAGTTTGTTGC+AGG | - | chr3_4:12783675-12783694 | Msa0490910:intron | 30.0% |
| !! | ATTTTGACATGTCTTGCATT+GGG | - | chr3_4:12783745-12783764 | Msa0490910:intron | 30.0% |
| TGACATCAACTATAGGATAT+CGG | + | chr3_4:12783794-12783813 | None:intergenic | 30.0% | |
| AACTGGTAACTAAATCTTGA+TGG | + | chr3_4:12783821-12783840 | None:intergenic | 30.0% | |
| ! | GTATGTTTTCAATCATTCCA+AGG | - | chr3_4:12783933-12783952 | Msa0490910:intron | 30.0% |
| !!! | TTTTCTGAAGCACTCAATTT+TGG | + | chr3_4:12784108-12784127 | None:intergenic | 30.0% |
| TAAATCCAGTATCAAACCAT+AGG | + | chr3_4:12784170-12784189 | None:intergenic | 30.0% | |
| TTACAATTAAGAGGCAAAAG+AGG | + | chr3_4:12784666-12784685 | None:intergenic | 30.0% | |
| !!! | TTTTTCGCTTTGGTTGGTTT+TGG | + | chr3_4:12777304-12777323 | None:intergenic | 35.0% |
| !! | CTTTTTCCTCTTTTTCGCTT+TGG | + | chr3_4:12777314-12777333 | None:intergenic | 35.0% |
| TGTTCTTGTTCAACTGTGTA+TGG | + | chr3_4:12777339-12777358 | None:intergenic | 35.0% | |
| AAGACGAAGAAGAACAACAA+TGG | - | chr3_4:12777379-12777398 | Msa0490910:three_prime_UTR | 35.0% | |
| AGACGAAGAAGAACAACAAT+GGG | - | chr3_4:12777380-12777399 | Msa0490910:three_prime_UTR | 35.0% | |
| AAAGGGTTACTTAGTTACCT+TGG | + | chr3_4:12777595-12777614 | None:intergenic | 35.0% | |
| ! | GAAGAGAAACCCATTTGTTA+CGG | - | chr3_4:12777662-12777681 | Msa0490910:CDS | 35.0% |
| CACTTATGGTCTGTTTGAAT+TGG | + | chr3_4:12777980-12777999 | None:intergenic | 35.0% | |
| ACTTATAAGTGCTTGTGCTA+TGG | + | chr3_4:12778070-12778089 | None:intergenic | 35.0% | |
| !! | GCTGTTTTCATAGGTTATCT+TGG | - | chr3_4:12778168-12778187 | Msa0490910:CDS | 35.0% |
| CTCAACCGCTAAACATTAAA+GGG | + | chr3_4:12778317-12778336 | None:intergenic | 35.0% | |
| TCTCAACCGCTAAACATTAA+AGG | + | chr3_4:12778318-12778337 | None:intergenic | 35.0% | |
| !! | GGAGTTTGATGATGAGATTA+TGG | - | chr3_4:12778393-12778412 | Msa0490910:intron | 35.0% |
| TGATGAGATTATGGGATTGA+AGG | - | chr3_4:12778402-12778421 | Msa0490910:intron | 35.0% | |
| !! | TGTATGTTTGGTTCCACTTT+TGG | - | chr3_4:12778460-12778479 | Msa0490910:intron | 35.0% |
| ! | GAATGTAAATTTTGTCACCG+TGG | - | chr3_4:12778649-12778668 | Msa0490910:intron | 35.0% |
| ! | ATGTTGGATTGGAATGAGTT+TGG | - | chr3_4:12778699-12778718 | Msa0490910:intron | 35.0% |
| ! | GAATGAGTTTGGTGAAATCA+TGG | - | chr3_4:12778710-12778729 | Msa0490910:intron | 35.0% |
| !! | ATTGTGTGTTTTGTTCTTGG+TGG | - | chr3_4:12778915-12778934 | Msa0490910:intron | 35.0% |
| !! | GTTTGGATTGGAAGTGATTT+TGG | - | chr3_4:12779282-12779301 | Msa0490910:intron | 35.0% |
| !! | TGATTTTGGTGAAATCATGG+TGG | - | chr3_4:12779296-12779315 | Msa0490910:intron | 35.0% |
| ! | AACCATAGAAAGTGTGTGTT+TGG | - | chr3_4:12779481-12779500 | Msa0490910:intron | 35.0% |
| AACCAAACACACACTTTCTA+TGG | + | chr3_4:12779486-12779505 | None:intergenic | 35.0% | |
| TGGTGAAAATTGGTTACGAA+TGG | - | chr3_4:12779511-12779530 | Msa0490910:intron | 35.0% | |
| TGAGCATATTTGTGTGAAAG+TGG | - | chr3_4:12779594-12779613 | Msa0490910:intron | 35.0% | |
| GAGCATATTTGTGTGAAAGT+GGG | - | chr3_4:12779595-12779614 | Msa0490910:intron | 35.0% | |
| GGTTGAAGGGTAAAAATTTG+AGG | - | chr3_4:12779616-12779635 | Msa0490910:intron | 35.0% | |
| TTGAGGCTCAAAATCATGTT+TGG | - | chr3_4:12779633-12779652 | Msa0490910:intron | 35.0% | |
| ! | TTTGGTTTCAATTTCATGGG+AGG | + | chr3_4:12779784-12779803 | None:intergenic | 35.0% |
| GAGTGAACTTTGTGTATGTT+TGG | + | chr3_4:12779802-12779821 | None:intergenic | 35.0% | |
| GCTTCTAATTTCTCGTCAAT+TGG | + | chr3_4:12779831-12779850 | None:intergenic | 35.0% | |
| ! | TTCATTTTCAGCTAGCAAAC+TGG | - | chr3_4:12779991-12780010 | Msa0490910:intron | 35.0% |
| TTTGTTCTGCTTTCATAACC+AGG | - | chr3_4:12780119-12780138 | Msa0490910:CDS | 35.0% | |
| GTGATTCTGCAAATCATGTT+TGG | + | chr3_4:12780187-12780206 | None:intergenic | 35.0% | |
| ! | CATGATGTAACTGACTTCAA+TGG | - | chr3_4:12780210-12780229 | Msa0490910:CDS | 35.0% |
| GATTCATTGCTGTACAACTT+TGG | - | chr3_4:12780285-12780304 | Msa0490910:intron | 35.0% | |
| AGATGAAGAAACTTCAACCA+TGG | - | chr3_4:12780326-12780345 | Msa0490910:intron | 35.0% | |
| TCAAGATGCCGTGAAAAAAT+TGG | - | chr3_4:12780395-12780414 | Msa0490910:CDS | 35.0% | |
| GTTAACAAGTTCCTTATCTG+AGG | + | chr3_4:12780472-12780491 | None:intergenic | 35.0% | |
| !! | CAGATAAGGAACTTGTTAAC+GGG | - | chr3_4:12780472-12780491 | Msa0490910:intron | 35.0% |
| TTTGGGTCTTACAGTTCATT+TGG | - | chr3_4:12780609-12780628 | Msa0490910:intron | 35.0% | |
| TATCACTTAACATCTCTCGA+TGG | + | chr3_4:12780638-12780657 | None:intergenic | 35.0% | |
| TCGAGAGATGTTAAGTGATA+AGG | - | chr3_4:12780638-12780657 | Msa0490910:intron | 35.0% | |
| TCTCTAATCTATAGCCTCAT+TGG | - | chr3_4:12780934-12780953 | Msa0490910:intron | 35.0% | |
| GGAGAAAAAATTACAGTCCA+AGG | - | chr3_4:12781058-12781077 | Msa0490910:intron | 35.0% | |
| ACTGGAGCAAAATAGACAAA+AGG | + | chr3_4:12781138-12781157 | None:intergenic | 35.0% | |
| AGGTAGCTAAGTTATTACTG+TGG | + | chr3_4:12781169-12781188 | None:intergenic | 35.0% | |
| TTACAGTTAGAGTCTACAAG+GGG | + | chr3_4:12781194-12781213 | None:intergenic | 35.0% | |
| AGAGTTAGACAGTTAGTTGT+CGG | + | chr3_4:12781226-12781245 | None:intergenic | 35.0% | |
| CAGAATAATACATGGGAACA+GGG | + | chr3_4:12781251-12781270 | None:intergenic | 35.0% | |
| !!! | CCCTGTTTTGACTTATTGTA+TGG | - | chr3_4:12781285-12781304 | Msa0490910:intron | 35.0% |
| TGGGTTTGTATAGGAAAACA+GGG | + | chr3_4:12781330-12781349 | None:intergenic | 35.0% | |
| TTGGGTTTGTATAGGAAAAC+AGG | + | chr3_4:12781331-12781350 | None:intergenic | 35.0% | |
| AAAAGCGAAACTAGAGTCAA+TGG | - | chr3_4:12781729-12781748 | Msa0490910:CDS | 35.0% | |
| AACAATACATCAACACTGTG+AGG | + | chr3_4:12781825-12781844 | None:intergenic | 35.0% | |
| TTGCTATATGAATCCATGCT+TGG | - | chr3_4:12781867-12781886 | Msa0490910:intron | 35.0% | |
| !!! | TGCTATTTTGGCTACTATAC+TGG | + | chr3_4:12782105-12782124 | None:intergenic | 35.0% |
| ATAGTAGCCAAAATAGCAGA+TGG | - | chr3_4:12782107-12782126 | Msa0490910:intron | 35.0% | |
| !!! | CTTTTAGCTTGGAGTATCTT+AGG | - | chr3_4:12782209-12782228 | Msa0490910:intron | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr3_4:12782439-12782458 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr3_4:12782438-12782457 | Msa0490910:intron | 35.0% | |
| ! | ATTTTTACCAAACAGAGCCT+TGG | + | chr3_4:12782478-12782497 | None:intergenic | 35.0% |
| GCTCTGTTTGGTAAAAATAG+CGG | - | chr3_4:12782480-12782499 | Msa0490910:intron | 35.0% | |
| ! | ACTGAAACATTGATGGTTAG+TGG | - | chr3_4:12782992-12783011 | Msa0490910:intron | 35.0% |
| TTCAATTTCTCATTGGGTAC+CGG | + | chr3_4:12783018-12783037 | None:intergenic | 35.0% | |
| TGAAATAAGCTATAAGCTCG+TGG | - | chr3_4:12783233-12783252 | Msa0490910:intron | 35.0% | |
| TAAGCTATAAGCTCATTTGG+TGG | - | chr3_4:12783308-12783327 | Msa0490910:intron | 35.0% | |
| AAGCTATAAGCTCATTTGGT+GGG | - | chr3_4:12783309-12783328 | Msa0490910:intron | 35.0% | |
| CTACTTAATGAGATAAGGCT+TGG | + | chr3_4:12783442-12783461 | None:intergenic | 35.0% | |
| CGACACTACTTAATGAGATA+AGG | + | chr3_4:12783447-12783466 | None:intergenic | 35.0% | |
| !!! | GCTATAACGTTTTTTGTGGT+TGG | - | chr3_4:12783536-12783555 | Msa0490910:intron | 35.0% |
| ! | ATCTCAGAAAAAGAGCATAG+TGG | + | chr3_4:12783562-12783581 | None:intergenic | 35.0% |
| !! | CTATAGTTTGTTGCAGGATT+TGG | - | chr3_4:12783681-12783700 | Msa0490910:intron | 35.0% |
| TTTGTTGCAGGATTTGGAAA+AGG | - | chr3_4:12783687-12783706 | Msa0490910:intron | 35.0% | |
| ! | AGGTACAAGTCTTCCATTTT+GGG | - | chr3_4:12783710-12783729 | Msa0490910:intron | 35.0% |
| !! | GATTTTGACATGTCTTGCAT+TGG | - | chr3_4:12783744-12783763 | Msa0490910:intron | 35.0% |
| ! | TTTTGACATGTCTTGCATTG+GGG | - | chr3_4:12783746-12783765 | Msa0490910:intron | 35.0% |
| GACATCAACTATAGGATATC+GGG | + | chr3_4:12783793-12783812 | None:intergenic | 35.0% | |
| TGGTCTATGACATCAACTAT+AGG | + | chr3_4:12783801-12783820 | None:intergenic | 35.0% | |
| !! | TATGAAACTTGCTAGATCCT+TGG | + | chr3_4:12783953-12783972 | None:intergenic | 35.0% |
| ! | AAAACATGTTGCTGGTGTTA+TGG | - | chr3_4:12784138-12784157 | Msa0490910:intron | 35.0% |
| GATTTACAACTAGATTCTGC+CGG | - | chr3_4:12784184-12784203 | Msa0490910:intron | 35.0% | |
| ATTTACAACTAGATTCTGCC+GGG | - | chr3_4:12784185-12784204 | Msa0490910:intron | 35.0% | |
| ! | AATGTGTTTTCGGAGTGTAA+GGG | + | chr3_4:12784236-12784255 | None:intergenic | 35.0% |
| CACAGACAATCTTAACTTTC+CGG | - | chr3_4:12784259-12784278 | Msa0490910:intron | 35.0% | |
| ACAGACAATCTTAACTTTCC+GGG | - | chr3_4:12784260-12784279 | Msa0490910:intron | 35.0% | |
| ATTGGATTTGGGGAAGAAAA+CGG | - | chr3_4:12784294-12784313 | Msa0490910:intron | 35.0% | |
| !!! | TCAACTTTTTTCTCTGCAGT+AGG | - | chr3_4:12784470-12784489 | Msa0490910:CDS | 35.0% |
| AATATGTTCGGCAGTAAAAC+AGG | + | chr3_4:12784532-12784551 | None:intergenic | 35.0% | |
| ! | TGTTTTACTGCCGAACATAT+TGG | - | chr3_4:12784531-12784550 | Msa0490910:CDS | 35.0% |
| GACAGAATATCAAGTACATG+TGG | + | chr3_4:12784584-12784603 | None:intergenic | 35.0% | |
| TCTATCCTGTTGTGTTAGTT+TGG | - | chr3_4:12784615-12784634 | Msa0490910:CDS | 35.0% | |
| TTTGACCAAACTAACACAAC+AGG | + | chr3_4:12784623-12784642 | None:intergenic | 35.0% | |
| AACCAACCAAAGCGAAAAAG+AGG | - | chr3_4:12777305-12777324 | Msa0490910:three_prime_UTR | 40.0% | |
| !! | TTCCTCTTTTTCGCTTTGGT+TGG | + | chr3_4:12777310-12777329 | None:intergenic | 40.0% |
| AAGAACAACAATGGGACGAT+TGG | - | chr3_4:12777388-12777407 | Msa0490910:three_prime_UTR | 40.0% | |
| AGAACAACAATGGGACGATT+GGG | - | chr3_4:12777389-12777408 | Msa0490910:three_prime_UTR | 40.0% | |
| ! | AGAAGCACAATGTTGGAACA+AGG | + | chr3_4:12777487-12777506 | None:intergenic | 40.0% |
| ! | GATGAAGAGAAGCACAATGT+TGG | + | chr3_4:12777494-12777513 | None:intergenic | 40.0% |
| !!! | AGTTGGTTTTAGACCCTGTT+TGG | - | chr3_4:12777725-12777744 | Msa0490910:CDS | 40.0% |
| CCAAACACACACACTCTTTA+TGG | + | chr3_4:12779204-12779223 | None:intergenic | 40.0% | |
| ! | CCATAAAGAGTGTGTGTGTT+TGG | - | chr3_4:12779201-12779220 | Msa0490910:intron | 40.0% |
| ! | AGTTTTTGCGAAAATCGCAG+TGG | - | chr3_4:12779338-12779357 | Msa0490910:intron | 40.0% |
| GTCTGGATTGACAATGAGTT+TGG | + | chr3_4:12779379-12779398 | None:intergenic | 40.0% | |
| TTGCATGCTAAATGCATGTC+TGG | + | chr3_4:12779396-12779415 | None:intergenic | 40.0% | |
| !! | GAAAGTGTGTGTTTGGTTCT+AGG | - | chr3_4:12779488-12779507 | Msa0490910:intron | 40.0% |
| !! | TGGTTCTAGGTGGTGAAAAT+TGG | - | chr3_4:12779501-12779520 | Msa0490910:intron | 40.0% |
| !! | TTTGTGTGAAAGTGGGTTGA+AGG | - | chr3_4:12779602-12779621 | Msa0490910:intron | 40.0% |
| !! | TTGTGTGAAAGTGGGTTGAA+GGG | - | chr3_4:12779603-12779622 | Msa0490910:intron | 40.0% |
| AGGCTCAAAATCATGTTTGG+AGG | - | chr3_4:12779636-12779655 | Msa0490910:intron | 40.0% | |
| TCAATGGGATTAAGCCTTTG+TGG | - | chr3_4:12780226-12780245 | Msa0490910:CDS | 40.0% | |
| CAATGGGATTAAGCCTTTGT+GGG | - | chr3_4:12780227-12780246 | Msa0490910:CDS | 40.0% | |
| TATTTATCGTCGTCCCACAA+AGG | + | chr3_4:12780243-12780262 | None:intergenic | 40.0% | |
| CATGGATGAAGATCTTGTGA+GGG | - | chr3_4:12780344-12780363 | Msa0490910:intron | 40.0% | |
| AGTTCCTTATCTGAGGAACT+AGG | + | chr3_4:12780465-12780484 | None:intergenic | 40.0% | |
| !! | TAAGGAACTTGTTAACGGGA+AGG | - | chr3_4:12780476-12780495 | Msa0490910:intron | 40.0% |
| TGTGTTGCAATGTGATTCTG+AGG | + | chr3_4:12780564-12780583 | None:intergenic | 40.0% | |
| TAGGCTAGAATGGATGCTTA+CGG | - | chr3_4:12780787-12780806 | Msa0490910:intron | 40.0% | |
| AAGAATCCCTCTCTGCTAAA+TGG | - | chr3_4:12780823-12780842 | Msa0490910:intron | 40.0% | |
| CCAGAATAATACATGGGAAC+AGG | + | chr3_4:12781252-12781271 | None:intergenic | 40.0% | |
| CCTGTTCCCATGTATTATTC+TGG | - | chr3_4:12781249-12781268 | Msa0490910:intron | 40.0% | |
| GTATAGGAAAACAGGGTTAC+TGG | + | chr3_4:12781323-12781342 | None:intergenic | 40.0% | |
| TCAGGTATAGATTTCCTGCT+TGG | - | chr3_4:12781602-12781621 | Msa0490910:CDS | 40.0% | |
| TGATATAGAAGCTACCAAGC+AGG | + | chr3_4:12781619-12781638 | None:intergenic | 40.0% | |
| !! | CAGCAAGAGACCGTTATTTT+TGG | + | chr3_4:12781706-12781725 | None:intergenic | 40.0% |
| ACTCACAATAGTTGCTGTGT+CGG | + | chr3_4:12781946-12781965 | None:intergenic | 40.0% | |
| TAGTGCACTATTGAGAACAC+TGG | + | chr3_4:12782008-12782027 | None:intergenic | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | - | chr3_4:12782388-12782407 | Msa0490910:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr3_4:12782432-12782451 | Msa0490910:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr3_4:12782433-12782452 | Msa0490910:intron | 40.0% | |
| ! | AAACATTGATGGTTAGTGGC+CGG | - | chr3_4:12782996-12783015 | Msa0490910:intron | 40.0% |
| TGTTGTATAAAAGGGCAACC+CGG | + | chr3_4:12783402-12783421 | None:intergenic | 40.0% | |
| ! | GAGGTACAAGTCTTCCATTT+TGG | - | chr3_4:12783709-12783728 | Msa0490910:intron | 40.0% |
| TCACAAACGTTCTCCCAAAA+TGG | + | chr3_4:12783726-12783745 | None:intergenic | 40.0% | |
| TACCAGTTCCACTATTCTTC+AGG | - | chr3_4:12783833-12783852 | Msa0490910:intron | 40.0% | |
| ! | AACCTGAAGAATAGTGGAAC+TGG | + | chr3_4:12783838-12783857 | None:intergenic | 40.0% |
| GTTGTCCTATGGTTTGATAC+TGG | - | chr3_4:12784162-12784181 | Msa0490910:intron | 40.0% | |
| ! | ATGTGTTTTCGGAGTGTAAG+GGG | + | chr3_4:12784235-12784254 | None:intergenic | 40.0% |
| ! | CAATGTGTTTTCGGAGTGTA+AGG | + | chr3_4:12784237-12784256 | None:intergenic | 40.0% |
| CTTACACTCCGAAAACACAT+TGG | - | chr3_4:12784235-12784254 | Msa0490910:intron | 40.0% | |
| ! | GTCTGTGACCAATGTGTTTT+CGG | + | chr3_4:12784246-12784265 | None:intergenic | 40.0% |
| AACCCATTGCCATTGGATTT+GGG | - | chr3_4:12784283-12784302 | Msa0490910:intron | 40.0% | |
| ! | GTTTTCTTCCCCAAATCCAA+TGG | + | chr3_4:12784295-12784314 | None:intergenic | 40.0% |
| TTGGATTTGGGGAAGAAAAC+GGG | - | chr3_4:12784295-12784314 | Msa0490910:intron | 40.0% | |
| GCAAATCAATCTTCACAGCA+GGG | + | chr3_4:12784353-12784372 | None:intergenic | 40.0% | |
| TGCAGAGAAAAAAGTTGAGC+AGG | + | chr3_4:12784468-12784487 | None:intergenic | 40.0% | |
| !!! | TTGGTTGGTTTTGGAAGGCA+TGG | + | chr3_4:12777295-12777314 | None:intergenic | 45.0% |
| !!! | TCGCTTTGGTTGGTTTTGGA+AGG | + | chr3_4:12777300-12777319 | None:intergenic | 45.0% |
| GACGATTGGGAAGAAAACGA+AGG | - | chr3_4:12777402-12777421 | Msa0490910:three_prime_UTR | 45.0% | |
| ! | GGAAGTGCAGGAACTGAAAT+TGG | + | chr3_4:12777466-12777485 | None:intergenic | 45.0% |
| ! | ATGTTGGAACAAGGAAGTGC+AGG | + | chr3_4:12777478-12777497 | None:intergenic | 45.0% |
| AGACGTGATTCCACCAAACT+CGG | - | chr3_4:12778789-12778808 | Msa0490910:intron | 45.0% | |
| AGGATTAACACCGAGTTTGG+TGG | + | chr3_4:12778802-12778821 | None:intergenic | 45.0% | |
| !! | ACCAAACTCGGTGTTAATCC+TGG | - | chr3_4:12778801-12778820 | Msa0490910:intron | 45.0% |
| TTGCATGCTATATGCTTGCC+AGG | + | chr3_4:12778822-12778841 | None:intergenic | 45.0% | |
| !! | AGTGTGTGTTTGGTTCTAGG+TGG | - | chr3_4:12779491-12779510 | Msa0490910:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr3_4:12779915-12779934 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr3_4:12779916-12779935 | None:intergenic | 45.0% |
| TTGCGTGCACATGTTGCTAA+CGG | - | chr3_4:12780092-12780111 | Msa0490910:CDS | 45.0% | |
| GTTCTGCTTTCATAACCAGG+TGG | - | chr3_4:12780122-12780141 | Msa0490910:CDS | 45.0% | |
| CCTCACAAGATCTTCATCCA+TGG | + | chr3_4:12780346-12780365 | None:intergenic | 45.0% | |
| CCATGGATGAAGATCTTGTG+AGG | - | chr3_4:12780343-12780362 | Msa0490910:intron | 45.0% | |
| CTTGCCTAGTTCCTCAGATA+AGG | - | chr3_4:12780458-12780477 | Msa0490910:intron | 45.0% | |
| AGGCTAGAATGGATGCTTAC+GGG | - | chr3_4:12780788-12780807 | Msa0490910:intron | 45.0% | |
| ACAGCACCATTTAGCAGAGA+GGG | + | chr3_4:12780832-12780851 | None:intergenic | 45.0% | |
| !! | GCTAAATGGTGCTGTGGTTA+TGG | - | chr3_4:12780837-12780856 | Msa0490910:intron | 45.0% |
| TCAAGTACGTTTCTCACCTG+AGG | + | chr3_4:12780885-12780904 | None:intergenic | 45.0% | |
| GTTAGAGTCTACAAGGGGAT+AGG | + | chr3_4:12781189-12781208 | None:intergenic | 45.0% | |
| !!! | AGCCTTTTTTCAGCTCAAGC+AGG | - | chr3_4:12781525-12781544 | Msa0490910:CDS | 45.0% |
| !!! | GCCTTTTTTCAGCTCAAGCA+GGG | - | chr3_4:12781526-12781545 | Msa0490910:CDS | 45.0% |
| !!! | CCTTTTTTCAGCTCAAGCAG+GGG | - | chr3_4:12781527-12781546 | Msa0490910:CDS | 45.0% |
| TTCAAGGGTCATTGCAGTTG+AGG | - | chr3_4:12781551-12781570 | Msa0490910:CDS | 45.0% | |
| AGAGTCAATGGCAACCAGAA+AGG | - | chr3_4:12781741-12781760 | Msa0490910:CDS | 45.0% | |
| CGTAGAAGTGGTTCATGGTA+TGG | - | chr3_4:12781767-12781786 | Msa0490910:CDS | 45.0% | |
| !! | ATAAAGCACTGAGCCAAGCA+TGG | + | chr3_4:12781883-12781902 | None:intergenic | 45.0% |
| CTCACAATAGTTGCTGTGTC+GGG | + | chr3_4:12781945-12781964 | None:intergenic | 45.0% | |
| TCTAGATGGAATGAAGGCAG+AGG | + | chr3_4:12781970-12781989 | None:intergenic | 45.0% | |
| !! | GTCTGCACCATCTGCTATTT+TGG | + | chr3_4:12782117-12782136 | None:intergenic | 45.0% |
| !! | TAAGGCTGTGGCTTTTAGCT+TGG | - | chr3_4:12782198-12782217 | Msa0490910:intron | 45.0% |
| CAATAAACGAGGGGTAACCT+TGG | - | chr3_4:12782352-12782371 | Msa0490910:intron | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | - | chr3_4:12782394-12782413 | Msa0490910:intron | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | - | chr3_4:12782395-12782414 | Msa0490910:intron | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr3_4:12782428-12782447 | None:intergenic | 45.0% |
| CAATACACCAAGGCTCTGTT+TGG | - | chr3_4:12782468-12782487 | Msa0490910:intron | 45.0% | |
| CTTACCAAACAGAGCCCAAA+TGG | - | chr3_4:12783332-12783351 | Msa0490910:intron | 45.0% | |
| GTTGCAGGATTTGGAAAAGG+AGG | - | chr3_4:12783690-12783709 | Msa0490910:intron | 45.0% | |
| GGCACAAACCTGAAGAATAG+TGG | + | chr3_4:12783844-12783863 | None:intergenic | 45.0% | |
| ATCCTACCAGACCTTTGACT+TGG | - | chr3_4:12784032-12784051 | Msa0490910:intron | 45.0% | |
| CTTCATGGTAGCCAAGTCAA+AGG | + | chr3_4:12784046-12784065 | None:intergenic | 45.0% | |
| ! | TACCATGAAGCACCATGAAG+TGG | - | chr3_4:12784056-12784075 | Msa0490910:intron | 45.0% |
| ATCCACTTCATGGTGCTTCA+TGG | + | chr3_4:12784061-12784080 | None:intergenic | 45.0% | |
| TTGCGGTGAAATCCACTTCA+TGG | + | chr3_4:12784071-12784090 | None:intergenic | 45.0% | |
| TTTCACCGCAACAGCTTCTT+TGG | - | chr3_4:12784080-12784099 | Msa0490910:intron | 45.0% | |
| TGGTTCCAAAGAAGCTGTTG+CGG | + | chr3_4:12784088-12784107 | None:intergenic | 45.0% | |
| ! | GGTGTTATGGAGTTGTCCTA+TGG | - | chr3_4:12784151-12784170 | Msa0490910:intron | 45.0% |
| GAACCCATTGCCATTGGATT+TGG | - | chr3_4:12784282-12784301 | Msa0490910:intron | 45.0% | |
| ACCCATTGCCATTGGATTTG+GGG | - | chr3_4:12784284-12784303 | Msa0490910:intron | 45.0% | |
| TCCCCAAATCCAATGGCAAT+GGG | + | chr3_4:12784288-12784307 | None:intergenic | 45.0% | |
| TTCCCCAAATCCAATGGCAA+TGG | + | chr3_4:12784289-12784308 | None:intergenic | 45.0% | |
| GGAAGAAAACGGGACAAAAC+CGG | - | chr3_4:12784305-12784324 | Msa0490910:intron | 45.0% | |
| GGGACAAAACCGGAAACAAT+TGG | - | chr3_4:12784315-12784334 | Msa0490910:intron | 45.0% | |
| CCTTCAGTGCCAATTGTTTC+CGG | + | chr3_4:12784327-12784346 | None:intergenic | 45.0% | |
| CGCAAATCAATCTTCACAGC+AGG | + | chr3_4:12784354-12784373 | None:intergenic | 45.0% | |
| !! | TCGCAGCATTGACATTTCCA+TGG | - | chr3_4:12784401-12784420 | Msa0490910:CDS | 45.0% |
| !! | TTAATAAATCAATAATAATT+TGG | + | chr3_4:12780748-12780767 | None:intergenic | 5.0% |
| !!! | AAAAAAACATTAAAATTTTA+AGG | - | chr3_4:12782180-12782199 | Msa0490910:intron | 5.0% |
| !!! | TTTAATATTTTTTTAATTGA+TGG | - | chr3_4:12782732-12782751 | Msa0490910:intron | 5.0% |
| !! | ATAAATAAGAAAAAAAATAA+AGG | - | chr3_4:12782926-12782945 | Msa0490910:intron | 5.0% |
| !! | ATATATAAAAAAAAAATAGA+GGG | - | chr3_4:12783083-12783102 | Msa0490910:intron | 5.0% |
| !!! | GATTTTAATTAAAATATTAA+GGG | - | chr3_4:12783114-12783133 | Msa0490910:intron | 5.0% |
| TCTGTCACTGCTGTGCTTGT+TGG | + | chr3_4:12778772-12778791 | None:intergenic | 50.0% | |
| GCCAGGATTAACACCGAGTT+TGG | + | chr3_4:12778805-12778824 | None:intergenic | 50.0% | |
| !! | TGTTGGGATTTTGGGGACCT+AGG | - | chr3_4:12779040-12779059 | Msa0490910:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr3_4:12779911-12779930 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr3_4:12779917-12779936 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr3_4:12779914-12779933 | Msa0490910:intron | 50.0% | |
| GTGCACATGTTGCTAACGGT+TGG | - | chr3_4:12780096-12780115 | Msa0490910:CDS | 50.0% | |
| GAGAGCAGATGTTGGAGTTG+TGG | - | chr3_4:12780147-12780166 | Msa0490910:CDS | 50.0% | |
| GTTAACGGGAAGGACTCAAG+AGG | - | chr3_4:12780486-12780505 | Msa0490910:intron | 50.0% | |
| CACAGCACCATTTAGCAGAG+AGG | + | chr3_4:12780833-12780852 | None:intergenic | 50.0% | |
| ! | CTCTCTGCTAAATGGTGCTG+TGG | - | chr3_4:12780831-12780850 | Msa0490910:intron | 50.0% |
| ! | GACGAGAGCATAGTCCAATG+AGG | + | chr3_4:12780951-12780970 | None:intergenic | 50.0% |
| AAGGGATTCCCCTTACAGCA+GGG | - | chr3_4:12781077-12781096 | Msa0490910:CDS | 50.0% | |
| AGCAAAAGCCCTGCTGTAAG+GGG | + | chr3_4:12781088-12781107 | None:intergenic | 50.0% | |
| GAGCAAAAGCCCTGCTGTAA+GGG | + | chr3_4:12781089-12781108 | None:intergenic | 50.0% | |
| TGAGCAAAAGCCCTGCTGTA+AGG | + | chr3_4:12781090-12781109 | None:intergenic | 50.0% | |
| CCCCTGCTTGAGCTGAAAAA+AGG | + | chr3_4:12781530-12781549 | None:intergenic | 50.0% | |
| AGTTGAGGCTAGTGCCAAGA+TGG | - | chr3_4:12781566-12781585 | Msa0490910:CDS | 50.0% | |
| CCACTTCTACGACTCCTTTC+TGG | + | chr3_4:12781758-12781777 | None:intergenic | 50.0% | |
| CCAGAAAGGAGTCGTAGAAG+TGG | - | chr3_4:12781755-12781774 | Msa0490910:CDS | 50.0% | |
| GGAGTCGTAGAAGTGGTTCA+TGG | - | chr3_4:12781762-12781781 | Msa0490910:CDS | 50.0% | |
| CAGTGCTTTATGCACGTGAC+CGG | - | chr3_4:12781892-12781911 | Msa0490910:intron | 50.0% | |
| ! | GTGACCGGTATTTGAAGCCT+GGG | - | chr3_4:12781907-12781926 | Msa0490910:intron | 50.0% |
| ! | TGACCGGTATTTGAAGCCTG+GGG | - | chr3_4:12781908-12781927 | Msa0490910:intron | 50.0% |
| AGTTGCTGTGTCGGGAAGAA+TGG | + | chr3_4:12781937-12781956 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr3_4:12782372-12782391 | None:intergenic | 50.0% | |
| AGGCTGCGTACAATACACCA+AGG | - | chr3_4:12782458-12782477 | Msa0490910:intron | 50.0% | |
| ACCAAACAGAGCCCAAATGG+TGG | - | chr3_4:12783335-12783354 | Msa0490910:intron | 50.0% | |
| CCAAACAGAGCCCAAATGGT+GGG | - | chr3_4:12783336-12783355 | Msa0490910:intron | 50.0% | |
| TGACATGTCTTGCATTGGGG+AGG | - | chr3_4:12783749-12783768 | Msa0490910:intron | 50.0% | |
| AGCCAAGTCAAAGGTCTGGT+AGG | + | chr3_4:12784037-12784056 | None:intergenic | 50.0% | |
| TGGTAGCCAAGTCAAAGGTC+TGG | + | chr3_4:12784041-12784060 | None:intergenic | 50.0% | |
| ! | ATCCAATGGCAATGGGTTCC+CGG | + | chr3_4:12784281-12784300 | None:intergenic | 50.0% |
| ! | CCGGAAACAATTGGCACTGA+AGG | - | chr3_4:12784324-12784343 | Msa0490910:intron | 50.0% |
| TGCTGCGATGCTCAGTAGAA+CGG | + | chr3_4:12784389-12784408 | None:intergenic | 50.0% | |
| GACATTTCCATGGAAGCTGC+TGG | - | chr3_4:12784411-12784430 | Msa0490910:CDS | 50.0% | |
| ACTTACACCAGCAGCTTCCA+TGG | + | chr3_4:12784421-12784440 | None:intergenic | 50.0% | |
| CTGGTGTAAGTCCTGATGGT+CGG | - | chr3_4:12784430-12784449 | Msa0490910:CDS | 50.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr3_4:12779903-12779922 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr3_4:12779902-12779921 | Msa0490910:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr3_4:12779903-12779922 | Msa0490910:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr3_4:12779909-12779928 | Msa0490910:intron | 55.0% | |
| AACATCTGCTCTCTGCCACC+TGG | + | chr3_4:12780140-12780159 | None:intergenic | 55.0% | |
| AGGTGGCAGAGAGCAGATGT+TGG | - | chr3_4:12780139-12780158 | Msa0490910:CDS | 55.0% | |
| ! | GGTGCTGTGGTTATGGACGT+CGG | - | chr3_4:12780844-12780863 | Msa0490910:intron | 55.0% |
| CTGCTGTAAGGGGAATCCCT+TGG | + | chr3_4:12781078-12781097 | None:intergenic | 55.0% | |
| CAAGGGATTCCCCTTACAGC+AGG | - | chr3_4:12781076-12781095 | Msa0490910:CDS | 55.0% | |
| AGCTCAAGCAGGGGCTTCAA+GGG | - | chr3_4:12781536-12781555 | Msa0490910:CDS | 55.0% | |
| TAGTGCCAAGATGGCAGCAG+TGG | - | chr3_4:12781575-12781594 | Msa0490910:CDS | 55.0% | |
| AGATGCCACTGCTGCCATCT+TGG | + | chr3_4:12781583-12781602 | None:intergenic | 55.0% | |
| ! | CGTGACCGGTATTTGAAGCC+TGG | - | chr3_4:12781906-12781925 | Msa0490910:intron | 55.0% |
| ! | GACCGGTATTTGAAGCCTGG+GGG | - | chr3_4:12781909-12781928 | Msa0490910:intron | 55.0% |
| CACCCCCAGGCTTCAAATAC+CGG | + | chr3_4:12781914-12781933 | None:intergenic | 55.0% | |
| ACATGTCCTGCAGCAGCCAT+GGG | + | chr3_4:12782047-12782066 | None:intergenic | 55.0% | |
| TACATGTCCTGCAGCAGCCA+TGG | + | chr3_4:12782048-12782067 | None:intergenic | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr3_4:12782407-12782426 | Msa0490910:intron | 55.0% | |
| CCCACCATTTGGGCTCTGTT+TGG | + | chr3_4:12783339-12783358 | None:intergenic | 55.0% | |
| ACAGCACAGCTGGTGTATCC+CGG | + | chr3_4:12784206-12784225 | None:intergenic | 55.0% | |
| TTCCGGGAACCCATTGCCAT+TGG | - | chr3_4:12784276-12784295 | Msa0490910:intron | 55.0% | |
| GCTGCTGGTGTAAGTCCTGA+TGG | - | chr3_4:12784426-12784445 | Msa0490910:CDS | 55.0% | |
| ! | GTGGTTATGGACGTCGGCTG+TGG | - | chr3_4:12780850-12780869 | Msa0490910:intron | 60.0% |
| ! | ATGGACGTCGGCTGTGGAAC+TGG | - | chr3_4:12780856-12780875 | Msa0490910:intron | 60.0% |
| GCTGTGGAACTGGCATCCTC+AGG | - | chr3_4:12780866-12780885 | Msa0490910:intron | 60.0% | |
| CAGCTCAAGCAGGGGCTTCA+AGG | - | chr3_4:12781535-12781554 | Msa0490910:CDS | 60.0% | |
| GATGGCAGCAGTGGCATCTC+AGG | - | chr3_4:12781584-12781603 | Msa0490910:CDS | 60.0% | |
| TAGCGTAGCAGAGCAGCCCA+TGG | - | chr3_4:12782028-12782047 | Msa0490910:intron | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr3_4:12782361-12782380 | Msa0490910:intron | 60.0% | |
| GGGAAGGGGTCCCACCATTT+GGG | + | chr3_4:12783349-12783368 | None:intergenic | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr3_4:12783348-12783367 | Msa0490910:intron | 60.0% |
| CTGAAGCTCCCGCATACGCA+GGG | + | chr3_4:12783375-12783394 | None:intergenic | 60.0% | |
| ACTGAAGCTCCCGCATACGC+AGG | + | chr3_4:12783376-12783395 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr3_4:12783380-12783399 | Msa0490910:intron | 60.0% | |
| GGGGATGTTGACAGCACAGC+TGG | + | chr3_4:12784216-12784235 | None:intergenic | 60.0% | |
| CAAGTGCGTCTCCGACCATC+AGG | + | chr3_4:12784444-12784463 | None:intergenic | 60.0% | |
| CTGATGGTCGGAGACGCACT+TGG | - | chr3_4:12784442-12784461 | Msa0490910:CDS | 60.0% | |
| TCGGGAAGAATGGCACCCCC+AGG | + | chr3_4:12781927-12781946 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr3_4:12783350-12783369 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr3_4:12783363-12783382 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr3_4:12783364-12783383 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr3_4:12783363-12783382 | Msa0490910:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr3_4:12783364-12783383 | Msa0490910:intron | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr3_4:12783381-12783400 | Msa0490910:intron | 65.0% | |
| GAGCAGCCCATGGCTGCTGC+AGG | - | chr3_4:12782038-12782057 | Msa0490910:intron | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr3_4:12783365-12783384 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr3_4:12783369-12783388 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr3_4:12783370-12783389 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 12777271 | 12784688 | 12777271 | ID=Msa0490910;Name=Msa0490910 |
| chr3_4 | mRNA | 12777271 | 12784688 | 12777271 | ID=Msa0490910-mRNA-1;Parent=Msa0490910;Name=Msa0490910-mRNA-1;_AED=0.05;_eAED=0.05;_QI=23|1|1|1|0.83|0.71|7|197|625 |
| chr3_4 | exon | 12777271 | 12777917 | 12777271 | ID=Msa0490910-mRNA-1:exon:3915;Parent=Msa0490910-mRNA-1 |
| chr3_4 | exon | 12778105 | 12778272 | 12778105 | ID=Msa0490910-mRNA-1:exon:3914;Parent=Msa0490910-mRNA-1 |
| chr3_4 | exon | 12780000 | 12780260 | 12780000 | ID=Msa0490910-mRNA-1:exon:3913;Parent=Msa0490910-mRNA-1 |
| chr3_4 | exon | 12780354 | 12780432 | 12780354 | ID=Msa0490910-mRNA-1:exon:3912;Parent=Msa0490910-mRNA-1 |
| chr3_4 | exon | 12781072 | 12781169 | 12781072 | ID=Msa0490910-mRNA-1:exon:3911;Parent=Msa0490910-mRNA-1 |
| chr3_4 | exon | 12781300 | 12781818 | 12781300 | ID=Msa0490910-mRNA-1:exon:3910;Parent=Msa0490910-mRNA-1 |
| chr3_4 | exon | 12784363 | 12784688 | 12784363 | ID=Msa0490910-mRNA-1:exon:3909;Parent=Msa0490910-mRNA-1 |
| chr3_4 | five_prime_UTR | 12784666 | 12784688 | 12784666 | ID=Msa0490910-mRNA-1:five_prime_utr;Parent=Msa0490910-mRNA-1 |
| chr3_4 | CDS | 12784363 | 12784665 | 12784363 | ID=Msa0490910-mRNA-1:cds;Parent=Msa0490910-mRNA-1 |
| chr3_4 | CDS | 12781300 | 12781818 | 12781300 | ID=Msa0490910-mRNA-1:cds;Parent=Msa0490910-mRNA-1 |
| chr3_4 | CDS | 12781072 | 12781169 | 12781072 | ID=Msa0490910-mRNA-1:cds;Parent=Msa0490910-mRNA-1 |
| chr3_4 | CDS | 12780354 | 12780432 | 12780354 | ID=Msa0490910-mRNA-1:cds;Parent=Msa0490910-mRNA-1 |
| chr3_4 | CDS | 12780000 | 12780260 | 12780000 | ID=Msa0490910-mRNA-1:cds;Parent=Msa0490910-mRNA-1 |
| chr3_4 | CDS | 12778105 | 12778272 | 12778105 | ID=Msa0490910-mRNA-1:cds;Parent=Msa0490910-mRNA-1 |
| chr3_4 | CDS | 12777468 | 12777917 | 12777468 | ID=Msa0490910-mRNA-1:cds;Parent=Msa0490910-mRNA-1 |
| chr3_4 | three_prime_UTR | 12777271 | 12777467 | 12777271 | ID=Msa0490910-mRNA-1:three_prime_utr;Parent=Msa0490910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
