Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1418690 | sp|Q9VI10|SMD2_DROME | 90.000 | 90 | 9 | 0 | 18 | 107 | 23 | 112 | 1.09e-46 | 149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1418690 | A0A1S2YDS1 | 100.000 | 108 | 0 | 0 | 1 | 108 | 1 | 108 | 9.03e-73 | 221 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa1418690 | 0.811495 | 6.804766e-51 | -8.615850e-47 |
| Msa0015440 | Msa1418690 | 0.801718 | 7.889369e-49 | -8.615850e-47 |
| Msa0044890 | Msa1418690 | 0.871717 | 5.524756e-67 | -8.615850e-47 |
| Msa0068970 | Msa1418690 | 0.866614 | 2.506446e-65 | -8.615850e-47 |
| Msa1366180 | Msa1418690 | 0.824757 | 6.789741e-54 | -8.615850e-47 |
| Msa1418690 | Msa1418760 | 0.809653 | 1.700907e-50 | -8.615850e-47 |
| Msa1418690 | Msa1444240 | 0.812404 | 4.313701e-51 | -8.615850e-47 |
| Msa0660850 | Msa1418690 | 0.827339 | 1.651942e-54 | -8.615850e-47 |
| Msa0704980 | Msa1418690 | 0.833200 | 6.113661e-56 | -8.615850e-47 |
| Msa0757940 | Msa1418690 | 0.831297 | 1.807791e-55 | -8.615850e-47 |
| Msa0799260 | Msa1418690 | 0.830105 | 3.541268e-55 | -8.615850e-47 |
| Msa0799310 | Msa1418690 | 0.833736 | 4.492821e-56 | -8.615850e-47 |
| Msa0837020 | Msa1418690 | 0.832346 | 9.963509e-56 | -8.615850e-47 |
| Msa0837630 | Msa1418690 | 0.808102 | 3.652620e-50 | -8.615850e-47 |
| Msa0164770 | Msa1418690 | 0.863481 | 2.413679e-64 | -8.615850e-47 |
| Msa0183090 | Msa1418690 | 0.841465 | 4.673673e-58 | -8.615850e-47 |
| Msa0188440 | Msa1418690 | 0.805465 | 1.317889e-49 | -8.615850e-47 |
| Msa0231030 | Msa1418690 | 0.809985 | 1.443088e-50 | -8.615850e-47 |
| Msa1225720 | Msa1418690 | 0.815596 | 8.527145e-52 | -8.615850e-47 |
| Msa1258390 | Msa1418690 | 0.840074 | 1.082451e-57 | -8.615850e-47 |
| Msa1300380 | Msa1418690 | 0.811532 | 6.677920e-51 | -8.615850e-47 |
| Msa1341130 | Msa1418690 | 0.832093 | 1.150750e-55 | -8.615850e-47 |
| Msa0375310 | Msa1418690 | 0.867582 | 1.230770e-65 | -8.615850e-47 |
| Msa0421500 | Msa1418690 | 0.862026 | 6.782210e-64 | -8.615850e-47 |
| Msa1088490 | Msa1418690 | 0.805845 | 1.096570e-49 | -8.615850e-47 |
| Msa0250820 | Msa1418690 | 0.835095 | 2.048545e-56 | -8.615850e-47 |
| Msa0264010 | Msa1418690 | 0.822462 | 2.339157e-53 | -8.615850e-47 |
| Msa0270550 | Msa1418690 | 0.812407 | 4.305511e-51 | -8.615850e-47 |
| Msa0342850 | Msa1418690 | 0.835743 | 1.405201e-56 | -8.615850e-47 |
| Msa1128120 | Msa1418690 | 0.816922 | 4.306494e-52 | -8.615850e-47 |
| Msa1167550 | Msa1418690 | 0.821775 | 3.375578e-53 | -8.615850e-47 |
| Msa1191830 | Msa1418690 | 0.822188 | 2.707116e-53 | -8.615850e-47 |
| Msa1211820 | Msa1418690 | 0.823009 | 1.743989e-53 | -8.615850e-47 |
| Msa1213480 | Msa1418690 | 0.813114 | 3.015652e-51 | -8.615850e-47 |
| Msa1215820 | Msa1418690 | 0.815020 | 1.144724e-51 | -8.615850e-47 |
| Msa1218110 | Msa1418690 | 0.814595 | 1.422220e-51 | -8.615850e-47 |
| Msa0485510 | Msa1418690 | 0.814867 | 1.237944e-51 | -8.615850e-47 |
| Msa0486070 | Msa1418690 | 0.870898 | 1.030025e-66 | -8.615850e-47 |
| Msa0490910 | Msa1418690 | 0.813945 | 1.979640e-51 | -8.615850e-47 |
| Msa0513990 | Msa1418690 | 0.830328 | 3.124868e-55 | -8.615850e-47 |
| Msa0554210 | Msa1418690 | 0.804319 | 2.286744e-49 | -8.615850e-47 |
| Msa0879540 | Msa1418690 | 0.802553 | 5.311768e-49 | -8.615850e-47 |
| Msa0930490 | Msa1418690 | 0.825778 | 3.894253e-54 | -8.615850e-47 |
| Msa0930550 | Msa1418690 | 0.831705 | 1.434677e-55 | -8.615850e-47 |
| Msa0945990 | Msa1418690 | 0.802493 | 5.464318e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1418690 | MtrunA17_Chr8g0392091 | 100.000 | 108 | 0 | 0 | 1 | 108 | 1 | 108 | 1.74e-76 | 221 |
| Msa1418690 | MtrunA17_Chr5g0447361 | 93.137 | 102 | 7 | 0 | 7 | 108 | 2 | 103 | 6.28e-66 | 194 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1418690 | AT2G47640.3 | 93.519 | 108 | 7 | 0 | 1 | 108 | 1 | 108 | 3.58e-71 | 207 |
| Msa1418690 | AT2G47640.2 | 93.519 | 108 | 7 | 0 | 1 | 108 | 1 | 108 | 3.58e-71 | 207 |
| Msa1418690 | AT3G62840.2 | 93.519 | 108 | 7 | 0 | 1 | 108 | 1 | 108 | 3.58e-71 | 207 |
| Msa1418690 | AT2G47640.1 | 92.661 | 109 | 7 | 1 | 1 | 108 | 1 | 109 | 1.41e-69 | 203 |
| Msa1418690 | AT2G47640.4 | 92.661 | 109 | 7 | 1 | 1 | 108 | 1 | 109 | 1.41e-69 | 203 |
| Msa1418690 | AT3G62840.1 | 92.661 | 109 | 7 | 1 | 1 | 108 | 1 | 109 | 1.41e-69 | 203 |
Find 64 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGGAGATACTAGCTTATT+TGG | 0.120204 | tig0024639:+509 | None:intergenic |
| CTCCACGTTTCAATAAAATT+TGG | 0.187552 | tig0024639:+407 | None:intergenic |
| TGCATTATTGGTATGAAATA+TGG | 0.196646 | tig0024639:-443 | Msa1418690:three_prime_UTR |
| TCAACTTCATTAGAGGAATT+TGG | 0.199510 | tig0024639:-1836 | Msa1418690:five_prime_UTR |
| AGAGAATACATACCTCATTT+TGG | 0.226756 | tig0024639:+1791 | None:intergenic |
| TTATTGAAACGTGGAGAAAT+TGG | 0.278647 | tig0024639:-400 | Msa1418690:three_prime_UTR |
| ATTCTGTCATCATTGTTCTT+AGG | 0.279548 | tig0024639:-536 | Msa1418690:CDS |
| TACTAAACTACTTATACTTT+TGG | 0.281753 | tig0024639:+188 | None:intergenic |
| AAGATTGAGCTTAAATAATA+AGG | 0.285883 | tig0024639:+220 | None:intergenic |
| ATGGAGATACTAGCTTATTT+GGG | 0.292207 | tig0024639:+510 | None:intergenic |
| TGCAGTTTCAACTTCATTAG+AGG | 0.302090 | tig0024639:-1843 | Msa1418690:five_prime_UTR |
| GAGTTGGATAAAAGCGGTTT+TGG | 0.304648 | tig0024639:-4006 | Msa1418690:five_prime_UTR |
| AAAAGCTTCTAGGCCGTGTC+AGG | 0.374760 | tig0024639:-800 | Msa1418690:CDS |
| TGGATCAAAACCCTAGTTTA+CGG | 0.383983 | tig0024639:+3959 | None:intergenic |
| TTGGTGGAGGATCTTGATTT+AGG | 0.384590 | tig0024639:-381 | Msa1418690:three_prime_UTR |
| AGTAGTTTAGTATTGTTTGC+TGG | 0.397036 | tig0024639:-177 | Msa1418690:three_prime_UTR |
| TTCTTTCCTTTACCAGTCTT+AGG | 0.400785 | tig0024639:+615 | None:intergenic |
| ATACCTCAGTCCACATTTCC+CGG | 0.408160 | tig0024639:+739 | None:intergenic |
| GATCTGCTTCTGCTTCTGCT+TGG | 0.426880 | tig0024639:-3821 | Msa1418690:intron |
| ATATGGTTCTTGAAAATGTC+CGG | 0.429724 | tig0024639:-758 | Msa1418690:CDS |
| CTCAATTGTTACAGGCTGTC+GGG | 0.432771 | tig0024639:-1015 | Msa1418690:intron |
| ATCAGCAAAATGTTCCTTCG+TGG | 0.434985 | tig0024639:-561 | Msa1418690:CDS |
| TCGTTGTTGACCCGTAAACT+AGG | 0.456360 | tig0024639:-3970 | Msa1418690:five_prime_UTR |
| ATGGAATTCGAGAACCGATT+CGG | 0.469046 | tig0024639:+3852 | None:intergenic |
| GGATCAAAACCCTAGTTTAC+GGG | 0.469563 | tig0024639:+3960 | None:intergenic |
| ACTTTGAACATAACTGAACT+AGG | 0.470561 | tig0024639:-3901 | Msa1418690:five_prime_UTR |
| GAACGAAAATGGGGCTGAGT+TGG | 0.475275 | tig0024639:-4022 | Msa1418690:five_prime_UTR |
| AACAAGATCAAACAAATTTG+CGG | 0.475374 | tig0024639:-344 | Msa1418690:three_prime_UTR |
| CCATCCCTCTGTTGAAGTAG+TGG | 0.478064 | tig0024639:-491 | Msa1418690:three_prime_UTR |
| TAGCTTACATCTTCTTCCAT+TGG | 0.480536 | tig0024639:+1667 | None:intergenic |
| CATCCCTCTGTTGAAGTAGT+GGG | 0.492663 | tig0024639:-490 | Msa1418690:three_prime_UTR |
| CAGGTGCCTAAGACTGGTAA+AGG | 0.497162 | tig0024639:-621 | Msa1418690:CDS |
| TTACATCTTCTTCCATTGGC+CGG | 0.497216 | tig0024639:+1671 | None:intergenic |
| TTGAAAATGTCCGGGAAATG+TGG | 0.500328 | tig0024639:-749 | Msa1418690:CDS |
| CGTTGTTGACCCGTAAACTA+GGG | 0.505968 | tig0024639:-3969 | Msa1418690:five_prime_UTR |
| CTCATCATGAGTACAGATAG+TGG | 0.509132 | tig0024639:+962 | None:intergenic |
| ATGTATCAGGTGCCTAAGAC+TGG | 0.510734 | tig0024639:-627 | Msa1418690:intron |
| TTGAAACGTGGAGAAATTGG+TGG | 0.515121 | tig0024639:-397 | Msa1418690:three_prime_UTR |
| AGAAGCAGATCTGAGATGAA+TGG | 0.515312 | tig0024639:+3833 | None:intergenic |
| TTGAGCTTAAATAATAAGGA+AGG | 0.521594 | tig0024639:+224 | None:intergenic |
| TATAAAGAGTAGATCCGAAT+CGG | 0.534917 | tig0024639:-3866 | Msa1418690:five_prime_UTR |
| GAAGGCTCAGCCAGTCAACA+AGG | 0.537512 | tig0024639:-592 | Msa1418690:CDS |
| CTTTGAACATAACTGAACTA+GGG | 0.537954 | tig0024639:-3900 | Msa1418690:five_prime_UTR |
| TGTAGTGATGATGTATGAAA+TGG | 0.537975 | tig0024639:-299 | Msa1418690:three_prime_UTR |
| ATGAAACGATCCTTGTTGAC+TGG | 0.541044 | tig0024639:+582 | None:intergenic |
| ACTCAATTGTTACAGGCTGT+CGG | 0.551091 | tig0024639:-1016 | Msa1418690:intron |
| TTCTTCTTGAAGCCGGCCAA+TGG | 0.551208 | tig0024639:-1683 | Msa1418690:intron |
| GACTGGTAAAGGAAAGAAGA+AGG | 0.552162 | tig0024639:-610 | Msa1418690:CDS |
| TGTCGGGAAGAATGAGGAAG+AGG | 0.555164 | tig0024639:-999 | Msa1418690:CDS |
| TATGGTTCTTGAAAATGTCC+GGG | 0.564509 | tig0024639:-757 | Msa1418690:CDS |
| TGTATGAAATGGTTCGACTC+TGG | 0.568262 | tig0024639:-288 | Msa1418690:three_prime_UTR |
| GTCTATCAAAAGCCCTGACA+CGG | 0.582472 | tig0024639:+787 | None:intergenic |
| CCACAGACTCTTCCAAAATG+AGG | 0.586420 | tig0024639:-1803 | Msa1418690:intron |
| TGGAGATACTAGCTTATTTG+GGG | 0.598626 | tig0024639:+511 | None:intergenic |
| AAACGTGGAGAAATTGGTGG+AGG | 0.605244 | tig0024639:-394 | Msa1418690:three_prime_UTR |
| ACAGGCTGTCGGGAAGAATG+AGG | 0.617342 | tig0024639:-1005 | Msa1418690:intron |
| GAGCCCACTACTTCAACAGA+GGG | 0.639565 | tig0024639:+487 | None:intergenic |
| GAGGAAGAGGAATTCAACAC+TGG | 0.639973 | tig0024639:-986 | Msa1418690:CDS |
| GGGGCTGAGTTGGATAAAAG+CGG | 0.647258 | tig0024639:-4012 | Msa1418690:five_prime_UTR |
| AGAGCCCACTACTTCAACAG+AGG | 0.653640 | tig0024639:+486 | None:intergenic |
| CCACTACTTCAACAGAGGGA+TGG | 0.654111 | tig0024639:+491 | None:intergenic |
| AAAGCTTCTAGGCCGTGTCA+GGG | 0.669612 | tig0024639:-799 | Msa1418690:CDS |
| TGTCCGGGAAATGTGGACTG+AGG | 0.699661 | tig0024639:-742 | Msa1418690:intron |
| TGATGACAGAATCTCCACGA+AGG | 0.746510 | tig0024639:+547 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+TGG | + | tig0024639:3020-3039 | None:intergenic | 0.0% |
| !!! | TTTAATTTAGATTGATTTTA+TGG | - | tig0024639:1638-1657 | Msa1418690:intron | 10.0% |
| !!! | TTTTATTATGATTTTATAGT+TGG | - | tig0024639:1897-1916 | Msa1418690:intron | 10.0% |
| !! | TTCAAAAAAAAAAATTACAA+AGG | + | tig0024639:2222-2241 | None:intergenic | 10.0% |
| !! | AAATCTAAATTAAATTACAA+AGG | + | tig0024639:2256-2275 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTAAAAAACAG+AGG | - | tig0024639:3029-3048 | Msa1418690:intron | 10.0% |
| !! | AAATAAGTTTCGAAATTAAA+AGG | + | tig0024639:428-447 | None:intergenic | 15.0% |
| !!! | ATTTCATTTTTGTTGAAATT+AGG | - | tig0024639:444-463 | Msa1418690:three_prime_UTR | 15.0% |
| !! | CAATACAATTAAAAGAAAAT+TGG | + | tig0024639:671-690 | None:intergenic | 15.0% |
| !!! | CAATTTTCTTTTAATTGTAT+TGG | - | tig0024639:669-688 | Msa1418690:intron | 15.0% |
| !!! | TTTTTTTTTTAGAATTGTTC+AGG | - | tig0024639:956-975 | Msa1418690:CDS | 15.0% |
| !! | ATCAGTTATTAAATGATAAA+AGG | + | tig0024639:2307-2326 | None:intergenic | 15.0% |
| !! | GAAAAAAAAAAAAGTCTTTG+AGG | - | tig0024639:510-529 | Msa1418690:exon | 20.0% |
| !! | ACAATAAAAAACGCAAAAAA+TGG | + | tig0024639:626-645 | None:intergenic | 20.0% |
| !!! | TTTTTATTGTGATTGTTGTT+TGG | - | tig0024639:636-655 | Msa1418690:intron | 20.0% |
| !! | AAAAAAAAAACACAAGAACA+GGG | + | tig0024639:946-965 | None:intergenic | 20.0% |
| !! | TAAAAAAAAAACACAAGAAC+AGG | + | tig0024639:947-966 | None:intergenic | 20.0% |
| !! | TGAATATGTGTTTATATAAG+CGG | - | tig0024639:1016-1035 | Msa1418690:intron | 20.0% |
| !! | AATATTCTTCTTAGAATTTG+TGG | + | tig0024639:1261-1280 | None:intergenic | 20.0% |
| !! | AAAAGATCATAGTAAAACAT+GGG | + | tig0024639:1522-1541 | None:intergenic | 20.0% |
| !! | AAAAAGATCATAGTAAAACA+TGG | + | tig0024639:1523-1542 | None:intergenic | 20.0% |
| !!! | TTTGTTGTTTTGCAATTTTA+CGG | - | tig0024639:1540-1559 | Msa1418690:intron | 20.0% |
| !!! | TGTTTTATCATTACATAACT+TGG | - | tig0024639:2823-2842 | Msa1418690:intron | 20.0% |
| !!! | ACTTTGACTTTAATGTTAAA+TGG | - | tig0024639:3107-3126 | Msa1418690:intron | 20.0% |
| !! | AAGATTGAGCTTAAATAATA+AGG | + | tig0024639:3973-3992 | None:intergenic | 20.0% |
| !!! | TACTAAACTACTTATACTTT+TGG | + | tig0024639:4005-4024 | None:intergenic | 20.0% |
| ! | AAAATCAAAGATAACACAAG+TGG | + | tig0024639:481-500 | None:intergenic | 25.0% |
| ! | AAAATGGAAAACATAAGCAA+AGG | + | tig0024639:610-629 | None:intergenic | 25.0% |
| !! | TGTTAAGAATTTTCCCTTAT+AGG | - | tig0024639:708-727 | Msa1418690:intron | 25.0% |
| !! | AGAATTAGCTTATCCTATAA+GGG | + | tig0024639:724-743 | None:intergenic | 25.0% |
| !! | AAGAATTAGCTTATCCTATA+AGG | + | tig0024639:725-744 | None:intergenic | 25.0% |
| !!! | AATTCTTTTGTTTACTCCAT+AGG | - | tig0024639:738-757 | Msa1418690:intron | 25.0% |
| !! | ATTAGTTTAATCATCATCAG+AGG | + | tig0024639:846-865 | None:intergenic | 25.0% |
| ! | GAATATGTGTTTATATAAGC+GGG | - | tig0024639:1017-1036 | Msa1418690:intron | 25.0% |
| ! | AATATGTGTTTATATAAGCG+GGG | - | tig0024639:1018-1037 | Msa1418690:intron | 25.0% |
| ! | TTAAGTGTAATTACAAGTGT+TGG | + | tig0024639:1137-1156 | None:intergenic | 25.0% |
| !!! | ATTTGTTATTCACGATTTTC+AGG | - | tig0024639:1612-1631 | Msa1418690:intron | 25.0% |
| ! | ATCATAATAAAAACACGAGA+TGG | + | tig0024639:1889-1908 | None:intergenic | 25.0% |
| !! | TCAATATGCTCTATTTGTTT+TGG | - | tig0024639:2768-2787 | Msa1418690:intron | 25.0% |
| ! | ATCATTACATAACTTGGTAA+AGG | - | tig0024639:2829-2848 | Msa1418690:intron | 25.0% |
| !!! | ATTTGAATTTACTTTTCTGC+TGG | - | tig0024639:3514-3533 | Msa1418690:intron | 25.0% |
| ! | TGCATTATTGGTATGAAATA+TGG | - | tig0024639:3747-3766 | Msa1418690:intron | 25.0% |
| ! | AACAAGATCAAACAAATTTG+CGG | - | tig0024639:3846-3865 | Msa1418690:five_prime_UTR | 25.0% |
| ! | TTGAGCTTAAATAATAAGGA+AGG | + | tig0024639:3969-3988 | None:intergenic | 25.0% |
| !!! | TTTGTTTTGTATGACAACGA+TGG | + | tig0024639:254-273 | None:intergenic | 30.0% |
| ACTTTGAACATAACTGAACT+AGG | - | tig0024639:289-308 | Msa1418690:three_prime_UTR | 30.0% | |
| CTTTGAACATAACTGAACTA+GGG | - | tig0024639:290-309 | Msa1418690:three_prime_UTR | 30.0% | |
| TATAAAGAGTAGATCCGAAT+CGG | - | tig0024639:324-343 | Msa1418690:three_prime_UTR | 30.0% | |
| TAATCCATGCGGAAATTATA+TGG | - | tig0024639:567-586 | Msa1418690:CDS | 30.0% | |
| !! | AATTTAGTGTTTTTGCTCCA+AGG | - | tig0024639:781-800 | Msa1418690:CDS | 30.0% |
| TATTCCATGCGGAAAATATA+TGG | - | tig0024639:884-903 | Msa1418690:intron | 30.0% | |
| CACATATTCAACACATATAC+AGG | + | tig0024639:1006-1025 | None:intergenic | 30.0% | |
| ATATGTGTTTATATAAGCGG+GGG | - | tig0024639:1019-1038 | Msa1418690:intron | 30.0% | |
| TAAAATTATTAGCCAGTGTC+CGG | - | tig0024639:1170-1189 | Msa1418690:intron | 30.0% | |
| TCTTCTTAGAATTTGTGGTT+GGG | + | tig0024639:1256-1275 | None:intergenic | 30.0% | |
| TTCTTCTTAGAATTTGTGGT+TGG | + | tig0024639:1257-1276 | None:intergenic | 30.0% | |
| GGAAATAGGAACAAAAATCA+AGG | + | tig0024639:1326-1345 | None:intergenic | 30.0% | |
| ! | TTTGTTCCTATTTCCTCTTT+TGG | - | tig0024639:1331-1350 | Msa1418690:intron | 30.0% |
| ! | TTGTCCATGCAGAAATTTTA+TGG | - | tig0024639:1430-1449 | Msa1418690:intron | 30.0% |
| ! | ATCATCAGAGGATTTTTGAA+TGG | + | tig0024639:1753-1772 | None:intergenic | 30.0% |
| ATTTGTTTGATCATCATCAG+AGG | + | tig0024639:1765-1784 | None:intergenic | 30.0% | |
| ATAATAAAAACACGAGATGG+AGG | + | tig0024639:1886-1905 | None:intergenic | 30.0% | |
| !! | AAATTTTAGCAGTTGCTGTT+TGG | - | tig0024639:1937-1956 | Msa1418690:intron | 30.0% |
| !!! | TTGTTCCAATTGGCTTTTTT+TGG | - | tig0024639:1964-1983 | Msa1418690:intron | 30.0% |
| TATAATTTGATCATCCTCAG+AGG | + | tig0024639:2069-2088 | None:intergenic | 30.0% | |
| TTTAACATGCGGAAATTTCA+TGG | - | tig0024639:2106-2125 | Msa1418690:intron | 30.0% | |
| ATCATACTGAAACAGAGATT+TGG | + | tig0024639:2191-2210 | None:intergenic | 30.0% | |
| TCAACTTCATTAGAGGAATT+TGG | - | tig0024639:2354-2373 | Msa1418690:intron | 30.0% | |
| ! | AGAGAATACATACCTCATTT+TGG | + | tig0024639:2402-2421 | None:intergenic | 30.0% |
| ! | TTGATTTTTCTTCTTGAAGC+CGG | - | tig0024639:2500-2519 | Msa1418690:intron | 30.0% |
| TTTGCATTATGATCCTGATA+TGG | - | tig0024639:2578-2597 | Msa1418690:intron | 30.0% | |
| TGTTCTATTTAGTGCACATT+TGG | - | tig0024639:2616-2635 | Msa1418690:intron | 30.0% | |
| TGTAGCTTCTGTTAAAATCA+AGG | + | tig0024639:2675-2694 | None:intergenic | 30.0% | |
| !! | ATTTTAACAGAAGCTACACT+TGG | - | tig0024639:2677-2696 | Msa1418690:intron | 30.0% |
| TGAAATCACAATTCTGAATC+AGG | + | tig0024639:2794-2813 | None:intergenic | 30.0% | |
| GAAGAAAGAAAAAAGAAGAC+TGG | + | tig0024639:3063-3082 | None:intergenic | 30.0% | |
| ! | GATTTTACAAACACTTATGC+AGG | - | tig0024639:3343-3362 | Msa1418690:intron | 30.0% |
| ! | TTTTGATAGACACTGCAATA+TGG | - | tig0024639:3415-3434 | Msa1418690:intron | 30.0% |
| ATATGGTTCTTGAAAATGTC+CGG | - | tig0024639:3432-3451 | Msa1418690:intron | 30.0% | |
| ATGCAAATTACTTCTCTACT+TGG | - | tig0024639:3488-3507 | Msa1418690:intron | 30.0% | |
| ATTCTGTCATCATTGTTCTT+AGG | - | tig0024639:3654-3673 | Msa1418690:intron | 30.0% | |
| ! | ATGGAGATACTAGCTTATTT+GGG | + | tig0024639:3683-3702 | None:intergenic | 30.0% |
| !!! | GCTTTGTTTTCTTGCATTAT+TGG | - | tig0024639:3735-3754 | Msa1418690:intron | 30.0% |
| ! | AGCCAAATTTTATTGAAACG+TGG | - | tig0024639:3781-3800 | Msa1418690:intron | 30.0% |
| CTCCACGTTTCAATAAAATT+TGG | + | tig0024639:3786-3805 | None:intergenic | 30.0% | |
| TTATTGAAACGTGGAGAAAT+TGG | - | tig0024639:3790-3809 | Msa1418690:intron | 30.0% | |
| ! | TGTAGTGATGATGTATGAAA+TGG | - | tig0024639:3891-3910 | Msa1418690:five_prime_UTR | 30.0% |
| !! | AACTACTTATACTTTTGGAG+CGG | + | tig0024639:4000-4019 | None:intergenic | 30.0% |
| AGTAGTTTAGTATTGTTTGC+TGG | - | tig0024639:4013-4032 | Msa1418690:five_prime_UTR | 30.0% | |
| ! | AGTTGGATAAAAGCGGTTTT+GGG | - | tig0024639:185-204 | Msa1418690:three_prime_UTR | 35.0% |
| TGGATCAAAACCCTAGTTTA+CGG | + | tig0024639:234-253 | None:intergenic | 35.0% | |
| AGGCATGAAGTTGAAGAAAA+TGG | + | tig0024639:408-427 | None:intergenic | 35.0% | |
| CATCAGAATATCATGACCTA+TGG | + | tig0024639:757-776 | None:intergenic | 35.0% | |
| TCATCAGAGGCTTATTGAAT+GGG | + | tig0024639:833-852 | None:intergenic | 35.0% | |
| ATCATCAGAGGCTTATTGAA+TGG | + | tig0024639:834-853 | None:intergenic | 35.0% | |
| AAAAAACACAAGAACAGGGA+TGG | + | tig0024639:942-961 | None:intergenic | 35.0% | |
| !! | GTAATTACAAGTGTTGGTGT+CGG | + | tig0024639:1131-1150 | None:intergenic | 35.0% |
| GAATCACCAAAAGAGGAAAT+AGG | + | tig0024639:1340-1359 | None:intergenic | 35.0% | |
| TCAGAGGCTTTACATTTAAG+TGG | + | tig0024639:1376-1395 | None:intergenic | 35.0% | |
| ACTTAAATGTAAAGCCTCTG+AGG | - | tig0024639:1375-1394 | Msa1418690:intron | 35.0% | |
| ATTTGTTTGATCATCCTCAG+AGG | + | tig0024639:1392-1411 | None:intergenic | 35.0% | |
| GTCTCCATAAAATTTCTGCA+TGG | + | tig0024639:1437-1456 | None:intergenic | 35.0% | |
| ! | GATTTTTGAATGGTGGTTTC+AGG | + | tig0024639:1743-1762 | None:intergenic | 35.0% |
| ! | ATCAGAGGATTTTTGAATGG+TGG | + | tig0024639:1750-1769 | None:intergenic | 35.0% |
| TTGTCCATGCGGAAATTATA+TGG | - | tig0024639:1803-1822 | Msa1418690:intron | 35.0% | |
| ! | GTTTGGTTTCTTGTTCCAAT+TGG | - | tig0024639:653-672 | Msa1418690:intron | 35.0% |
| AAGTGCCAAAAAAAGCCAAT+TGG | + | tig0024639:1972-1991 | None:intergenic | 35.0% | |
| GTTCTTCTGAGTTTAACATG+CGG | - | tig0024639:2095-2114 | Msa1418690:intron | 35.0% | |
| TGCAGTTTCAACTTCATTAG+AGG | - | tig0024639:2347-2366 | Msa1418690:intron | 35.0% | |
| TAGCTTACATCTTCTTCCAT+TGG | + | tig0024639:2526-2545 | None:intergenic | 35.0% | |
| ACAGATATGCAATCCATATC+AGG | + | tig0024639:2594-2613 | None:intergenic | 35.0% | |
| ATTTGGATTGACCTTGAGTT+TGG | - | tig0024639:2633-2652 | Msa1418690:intron | 35.0% | |
| TGAGTTTGACTAAATCATGC+TGG | + | tig0024639:2724-2743 | None:intergenic | 35.0% | |
| AAAAAAGAAGACTGGACTTC+AGG | + | tig0024639:3055-3074 | None:intergenic | 35.0% | |
| CTGACATACTCAATTGTTAC+AGG | - | tig0024639:3167-3186 | Msa1418690:intron | 35.0% | |
| TACTGTGTGTTCTTCTTGAT+CGG | - | tig0024639:3298-3317 | Msa1418690:intron | 35.0% | |
| CGTAACAACAAAAAGCTTCT+AGG | - | tig0024639:3380-3399 | Msa1418690:intron | 35.0% | |
| TATGGTTCTTGAAAATGTCC+GGG | - | tig0024639:3433-3452 | Msa1418690:intron | 35.0% | |
| !! | TGAATTTACTTTTCTGCTGG+TGG | - | tig0024639:3517-3536 | Msa1418690:intron | 35.0% |
| ATGTTCTGCTTGTATGTATC+AGG | - | tig0024639:3550-3569 | Msa1418690:intron | 35.0% | |
| TTCTTTCCTTTACCAGTCTT+AGG | + | tig0024639:3578-3597 | None:intergenic | 35.0% | |
| ! | TGGAGATACTAGCTTATTTG+GGG | + | tig0024639:3682-3701 | None:intergenic | 35.0% |
| ! | GATGGAGATACTAGCTTATT+TGG | + | tig0024639:3684-3703 | None:intergenic | 35.0% |
| !!! | AAGTAGTGGGCTCTTATTTT+TGG | - | tig0024639:3713-3732 | Msa1418690:intron | 35.0% |
| !!! | ACTACTTATACTTTTGGAGC+GGG | + | tig0024639:3999-4018 | None:intergenic | 35.0% |
| ! | GAGTTGGATAAAAGCGGTTT+TGG | - | tig0024639:184-203 | Msa1418690:three_prime_UTR | 40.0% |
| GGATCAAAACCCTAGTTTAC+GGG | + | tig0024639:233-252 | None:intergenic | 40.0% | |
| ATGGAATTCGAGAACCGATT+CGG | + | tig0024639:341-360 | None:intergenic | 40.0% | |
| ! | AGAAGCAGATCTGAGATGAA+TGG | + | tig0024639:360-379 | None:intergenic | 40.0% |
| GTTCTTCTGAGTAATCCATG+CGG | - | tig0024639:556-575 | Msa1418690:CDS | 40.0% | |
| GTCTCCATATAATTTCCGCA+TGG | + | tig0024639:574-593 | None:intergenic | 40.0% | |
| AAGCAAAGGCTATTCAGTTC+AGG | + | tig0024639:596-615 | None:intergenic | 40.0% | |
| !!! | TTTGCTCCAAGGTTTTTAGC+TGG | - | tig0024639:792-811 | Msa1418690:CDS | 40.0% |
| GCTTATTGAATGGGGTTTGA+AGG | + | tig0024639:824-843 | None:intergenic | 40.0% | |
| CATCAGAGGCTTATTGAATG+GGG | + | tig0024639:832-851 | None:intergenic | 40.0% | |
| GTTCTTCTGAGTATTCCATG+CGG | - | tig0024639:873-892 | Msa1418690:intron | 40.0% | |
| ! | GTCTCCATATATTTTCCGCA+TGG | + | tig0024639:891-910 | None:intergenic | 40.0% |
| TAAGAAAGCCTCTTCAGTTC+AGG | + | tig0024639:913-932 | None:intergenic | 40.0% | |
| TCTTTGTATTAGGTGTGTCC+CGG | - | tig0024639:1080-1099 | Msa1418690:intron | 40.0% | |
| AAGGCAAGAATCACCAAAAG+AGG | + | tig0024639:1347-1366 | None:intergenic | 40.0% | |
| !! | TCTTTTGGTGATTCTTGCCT+TGG | - | tig0024639:1346-1365 | Msa1418690:intron | 40.0% |
| TACATTTAAGTGGTGCTCCA+AGG | + | tig0024639:1366-1385 | None:intergenic | 40.0% | |
| TTAACAAGCCTCTTCAGTTC+AGG | + | tig0024639:1459-1478 | None:intergenic | 40.0% | |
| TTAGCAAGCCTATTCAGTTC+AGG | + | tig0024639:1569-1588 | None:intergenic | 40.0% | |
| ! | CTCAAAGCTTTAATGCGAGT+AGG | - | tig0024639:1680-1699 | Msa1418690:intron | 40.0% |
| !! | ATGCGAGTAGGTCTTGTTTA+AGG | - | tig0024639:1692-1711 | Msa1418690:intron | 40.0% |
| TAATTTCCGCATGGACAACT+CGG | + | tig0024639:1801-1820 | None:intergenic | 40.0% | |
| GTCTCCATATAATTTCCGCA+TGG | + | tig0024639:574-593 | None:intergenic | 40.0% | |
| ATAGAAAGCCTCTTCAGTTC+AGG | + | tig0024639:1832-1851 | None:intergenic | 40.0% | |
| GGATATGACACTAGGGTAAT+GGG | + | tig0024639:1865-1884 | None:intergenic | 40.0% | |
| AGGATATGACACTAGGGTAA+TGG | + | tig0024639:1866-1885 | None:intergenic | 40.0% | |
| AGATGGAGGATATGACACTA+GGG | + | tig0024639:1872-1891 | None:intergenic | 40.0% | |
| AAACAGAGATTTGGAAGCCA+TGG | + | tig0024639:2182-2201 | None:intergenic | 40.0% | |
| ACAAGAAAGCAATGAGCTGA+AGG | + | tig0024639:2282-2301 | None:intergenic | 40.0% | |
| TGAGGTATGTATTCTCTTGC+TGG | - | tig0024639:2405-2424 | Msa1418690:intron | 40.0% | |
| TTACATCTTCTTCCATTGGC+CGG | + | tig0024639:2522-2541 | None:intergenic | 40.0% | |
| ! | TGAAAGTCAGCTTTGTGTTG+TGG | - | tig0024639:2916-2935 | Msa1418690:intron | 40.0% |
| TCTTTCTTCATGCGTCACAA+TGG | - | tig0024639:3074-3093 | Msa1418690:intron | 40.0% | |
| ACTCAATTGTTACAGGCTGT+CGG | - | tig0024639:3174-3193 | Msa1418690:intron | 40.0% | |
| CTCATCATGAGTACAGATAG+TGG | + | tig0024639:3231-3250 | None:intergenic | 40.0% | |
| GAGTGTGAAAAACAACACAC+AGG | - | tig0024639:3248-3267 | Msa1418690:intron | 40.0% | |
| TTGAAAATGTCCGGGAAATG+TGG | - | tig0024639:3441-3460 | Msa1418690:intron | 40.0% | |
| GACTGGTAAAGGAAAGAAGA+AGG | - | tig0024639:3580-3599 | Msa1418690:intron | 40.0% | |
| ATGAAACGATCCTTGTTGAC+TGG | + | tig0024639:3611-3630 | None:intergenic | 40.0% | |
| ATCAGCAAAATGTTCCTTCG+TGG | - | tig0024639:3629-3648 | Msa1418690:intron | 40.0% | |
| TTGAAACGTGGAGAAATTGG+TGG | - | tig0024639:3793-3812 | Msa1418690:intron | 40.0% | |
| TTGGTGGAGGATCTTGATTT+AGG | - | tig0024639:3809-3828 | Msa1418690:intron | 40.0% | |
| TGTATGAAATGGTTCGACTC+TGG | - | tig0024639:3902-3921 | Msa1418690:five_prime_UTR | 40.0% | |
| !!! | CTACTTATACTTTTGGAGCG+GGG | + | tig0024639:3998-4017 | None:intergenic | 40.0% |
| TCGTTGTTGACCCGTAAACT+AGG | - | tig0024639:220-239 | Msa1418690:three_prime_UTR | 45.0% | |
| CGTTGTTGACCCGTAAACTA+GGG | - | tig0024639:221-240 | Msa1418690:three_prime_UTR | 45.0% | |
| CCTAGACCAGCTAAAAACCT+TGG | + | tig0024639:801-820 | None:intergenic | 45.0% | |
| !!! | CCAAGGTTTTTAGCTGGTCT+AGG | - | tig0024639:798-817 | Msa1418690:CDS | 45.0% |
| TATGGAGACCTGAACTGAAG+AGG | - | tig0024639:902-921 | Msa1418690:intron | 45.0% | |
| GTCCCACATTAGTTGAGAGA+TGG | - | tig0024639:980-999 | Msa1418690:CDS | 45.0% | |
| GGCCATCTCTCAACTAATGT+GGG | + | tig0024639:985-1004 | None:intergenic | 45.0% | |
| AGGCCATCTCTCAACTAATG+TGG | + | tig0024639:986-1005 | None:intergenic | 45.0% | |
| GCACGGACACTCTTTGTATT+AGG | - | tig0024639:1070-1089 | Msa1418690:intron | 45.0% | |
| TGAGCTATGAAGCACGGATA+CGG | + | tig0024639:1205-1224 | None:intergenic | 45.0% | |
| ! | TAGCTCACAAGCCAGTTTTG+TGG | - | tig0024639:1218-1237 | Msa1418690:intron | 45.0% |
| !! | AGCTCACAAGCCAGTTTTGT+GGG | - | tig0024639:1219-1238 | Msa1418690:intron | 45.0% |
| CTAACACAACCCCACAAAAC+TGG | + | tig0024639:1232-1251 | None:intergenic | 45.0% | |
| !! | CAGTTTTGTGGGGTTGTGTT+AGG | - | tig0024639:1230-1249 | Msa1418690:intron | 45.0% |
| TATGGAGACCTGAACTGAAG+AGG | - | tig0024639:902-921 | Msa1418690:intron | 45.0% | |
| TTCTCCTTTCCTTTCTGCCA+TGG | - | tig0024639:1487-1506 | Msa1418690:intron | 45.0% | |
| AAAGCCATGGCAGAAAGGAA+AGG | + | tig0024639:1494-1513 | None:intergenic | 45.0% | |
| ATGTGAAAGCCATGGCAGAA+AGG | + | tig0024639:1499-1518 | None:intergenic | 45.0% | |
| AACATGGGATGTGAAAGCCA+TGG | + | tig0024639:1507-1526 | None:intergenic | 45.0% | |
| TACGGAGACCTGAACTGAAT+AGG | - | tig0024639:1558-1577 | Msa1418690:intron | 45.0% | |
| TATGGAGACCTGAACTGAAG+AGG | - | tig0024639:902-921 | Msa1418690:intron | 45.0% | |
| !! | ATGACACTAGGGTAATGGGA+AGG | + | tig0024639:1861-1880 | None:intergenic | 45.0% |
| GAGATGGAGGATATGACACT+AGG | + | tig0024639:1873-1892 | None:intergenic | 45.0% | |
| ! | ATACTCAAGCGGGGTTTTCA+AGG | + | tig0024639:2044-2063 | None:intergenic | 45.0% |
| CAAGTATGCCTCTTCAGTTC+AGG | + | tig0024639:2135-2154 | None:intergenic | 45.0% | |
| ATTTGGAAGCCATGGCACAA+AGG | + | tig0024639:2174-2193 | None:intergenic | 45.0% | |
| !! | CCTCATTTTGGAAGAGTCTG+TGG | + | tig0024639:2390-2409 | None:intergenic | 45.0% |
| CCACAGACTCTTCCAAAATG+AGG | - | tig0024639:2387-2406 | Msa1418690:intron | 45.0% | |
| TGGATTGACCTTGAGTTTGG+CGG | - | tig0024639:2636-2655 | Msa1418690:intron | 45.0% | |
| CTCAATTGTTACAGGCTGTC+GGG | - | tig0024639:3175-3194 | Msa1418690:intron | 45.0% | |
| GAGGAAGAGGAATTCAACAC+TGG | - | tig0024639:3204-3223 | Msa1418690:intron | 45.0% | |
| GTCTATCAAAAGCCCTGACA+CGG | + | tig0024639:3406-3425 | None:intergenic | 45.0% | |
| ATACCTCAGTCCACATTTCC+CGG | + | tig0024639:3454-3473 | None:intergenic | 45.0% | |
| ATGTATCAGGTGCCTAAGAC+TGG | - | tig0024639:3563-3582 | Msa1418690:intron | 45.0% | |
| TGATGACAGAATCTCCACGA+AGG | + | tig0024639:3646-3665 | None:intergenic | 45.0% | |
| CATCCCTCTGTTGAAGTAGT+GGG | - | tig0024639:3700-3719 | Msa1418690:intron | 45.0% | |
| AAACGTGGAGAAATTGGTGG+AGG | - | tig0024639:3796-3815 | Msa1418690:intron | 45.0% | |
| ! | GGGGCTGAGTTGGATAAAAG+CGG | - | tig0024639:178-197 | Msa1418690:three_prime_UTR | 50.0% |
| GATCTGCTTCTGCTTCTGCT+TGG | - | tig0024639:369-388 | Msa1418690:three_prime_UTR | 50.0% | |
| ! | TCATAGCTTGTGAGGCATGG+AGG | + | tig0024639:1049-1068 | None:intergenic | 50.0% |
| ! | GCTTCATAGCTTGTGAGGCA+TGG | + | tig0024639:1052-1071 | None:intergenic | 50.0% |
| GCCTCACAAGCTATGAAGCA+CGG | - | tig0024639:1053-1072 | Msa1418690:intron | 50.0% | |
| ! | TCCGTGCTTCATAGCTTGTG+AGG | + | tig0024639:1057-1076 | None:intergenic | 50.0% |
| TATTAGGTGTGTCCCGGTGT+CGG | - | tig0024639:1086-1105 | Msa1418690:intron | 50.0% | |
| GGCTTGTGAGCTATGAAGCA+CGG | + | tig0024639:1211-1230 | None:intergenic | 50.0% | |
| !! | GCTCACAAGCCAGTTTTGTG+GGG | - | tig0024639:1220-1239 | Msa1418690:intron | 50.0% |
| GTTCTTCCGAGTTGTCCATG+CGG | - | tig0024639:1792-1811 | Msa1418690:intron | 50.0% | |
| TCAGAGGCTATACTCAAGCG+GGG | + | tig0024639:2053-2072 | None:intergenic | 50.0% | |
| CTCAGAGGCTATACTCAAGC+GGG | + | tig0024639:2054-2073 | None:intergenic | 50.0% | |
| CCTCAGAGGCTATACTCAAG+CGG | + | tig0024639:2055-2074 | None:intergenic | 50.0% | |
| CATGGAGACCTGAACTGAAG+AGG | - | tig0024639:2124-2143 | Msa1418690:intron | 50.0% | |
| TTTCCCCTTCCTTTGTGCCA+TGG | - | tig0024639:2162-2181 | Msa1418690:intron | 50.0% | |
| AAGCCATGGCACAAAGGAAG+GGG | + | tig0024639:2168-2187 | None:intergenic | 50.0% | |
| GAAGCCATGGCACAAAGGAA+GGG | + | tig0024639:2169-2188 | None:intergenic | 50.0% | |
| TTCTTCTTGAAGCCGGCCAA+TGG | - | tig0024639:2507-2526 | Msa1418690:intron | 50.0% | |
| CCAAGATTCCGCCAAACTCA+AGG | + | tig0024639:2647-2666 | None:intergenic | 50.0% | |
| CCTTGAGTTTGGCGGAATCT+TGG | - | tig0024639:2644-2663 | Msa1418690:intron | 50.0% | |
| TGTCGGGAAGAATGAGGAAG+AGG | - | tig0024639:3191-3210 | Msa1418690:intron | 50.0% | |
| AAAAGCTTCTAGGCCGTGTC+AGG | - | tig0024639:3390-3409 | Msa1418690:intron | 50.0% | |
| AAAGCTTCTAGGCCGTGTCA+GGG | - | tig0024639:3391-3410 | Msa1418690:intron | 50.0% | |
| CAGGTGCCTAAGACTGGTAA+AGG | - | tig0024639:3569-3588 | Msa1418690:intron | 50.0% | |
| CCACTACTTCAACAGAGGGA+TGG | + | tig0024639:3702-3721 | None:intergenic | 50.0% | |
| CCATCCCTCTGTTGAAGTAG+TGG | - | tig0024639:3699-3718 | Msa1418690:intron | 50.0% | |
| GAGCCCACTACTTCAACAGA+GGG | + | tig0024639:3706-3725 | None:intergenic | 50.0% | |
| AGAGCCCACTACTTCAACAG+AGG | + | tig0024639:3707-3726 | None:intergenic | 50.0% | |
| !!! | AAGCGGTTTTGGGCTGCGAA+TGG | - | tig0024639:195-214 | Msa1418690:three_prime_UTR | 55.0% |
| !!! | AGCGGTTTTGGGCTGCGAAT+GGG | - | tig0024639:196-215 | Msa1418690:three_prime_UTR | 55.0% |
| CTGCTTCTGCTTCTGCTTGG+AGG | - | tig0024639:372-391 | Msa1418690:three_prime_UTR | 55.0% | |
| ACGGATACGGACACAGACAC+CGG | + | tig0024639:1192-1211 | None:intergenic | 55.0% | |
| CCGCTTGAGTATAGCCTCTG+AGG | - | tig0024639:2052-2071 | Msa1418690:intron | 55.0% | |
| GGAAGCCATGGCACAAAGGA+AGG | + | tig0024639:2170-2189 | None:intergenic | 55.0% | |
| ACAGGCTGTCGGGAAGAATG+AGG | - | tig0024639:3185-3204 | Msa1418690:intron | 55.0% | |
| ! | TGTCCGGGAAATGTGGACTG+AGG | - | tig0024639:3448-3467 | Msa1418690:intron | 55.0% |
| GAAGGCTCAGCCAGTCAACA+AGG | - | tig0024639:3598-3617 | Msa1418690:intron | 55.0% | |
| ACACGACACGTGTCCGACAC+CGG | + | tig0024639:1102-1121 | None:intergenic | 60.0% | |
| CACGACACGTGTCCGACACC+GGG | + | tig0024639:1101-1120 | None:intergenic | 65.0% | |
| CGGACACAGACACCGGACAC+TGG | + | tig0024639:1185-1204 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024639 | gene | 171 | 4041 | 171 | ID=Msa1418690;Name=Msa1418690 |
| tig0024639 | mRNA | 171 | 4041 | 171 | ID=Msa1418690-mRNA-1;Parent=Msa1418690;Name=Msa1418690-mRNA-1;_AED=0.09;_eAED=0.09;_QI=281|1|1|1|0.8|0.66|6|353|108 |
| tig0024639 | exon | 171 | 640 | 171 | ID=Msa1418690-mRNA-1:exon:498;Parent=Msa1418690-mRNA-1 |
| tig0024639 | exon | 743 | 847 | 743 | ID=Msa1418690-mRNA-1:exon:497;Parent=Msa1418690-mRNA-1 |
| tig0024639 | exon | 943 | 1023 | 943 | ID=Msa1418690-mRNA-1:exon:496;Parent=Msa1418690-mRNA-1 |
| tig0024639 | exon | 1675 | 1693 | 1675 | ID=Msa1418690-mRNA-1:exon:495;Parent=Msa1418690-mRNA-1 |
| tig0024639 | exon | 1804 | 1870 | 1804 | ID=Msa1418690-mRNA-1:exon:494;Parent=Msa1418690-mRNA-1 |
| tig0024639 | exon | 3823 | 4041 | 3823 | ID=Msa1418690-mRNA-1:exon:493;Parent=Msa1418690-mRNA-1 |
| tig0024639 | five_prime_UTR | 3823 | 4041 | 3823 | ID=Msa1418690-mRNA-1:five_prime_utr;Parent=Msa1418690-mRNA-1 |
| tig0024639 | five_prime_UTR | 1809 | 1870 | 1809 | ID=Msa1418690-mRNA-1:five_prime_utr;Parent=Msa1418690-mRNA-1 |
| tig0024639 | CDS | 1804 | 1808 | 1804 | ID=Msa1418690-mRNA-1:cds;Parent=Msa1418690-mRNA-1 |
| tig0024639 | CDS | 1675 | 1693 | 1675 | ID=Msa1418690-mRNA-1:cds;Parent=Msa1418690-mRNA-1 |
| tig0024639 | CDS | 943 | 1023 | 943 | ID=Msa1418690-mRNA-1:cds;Parent=Msa1418690-mRNA-1 |
| tig0024639 | CDS | 743 | 847 | 743 | ID=Msa1418690-mRNA-1:cds;Parent=Msa1418690-mRNA-1 |
| tig0024639 | CDS | 524 | 640 | 524 | ID=Msa1418690-mRNA-1:cds;Parent=Msa1418690-mRNA-1 |
| tig0024639 | three_prime_UTR | 171 | 523 | 171 | ID=Msa1418690-mRNA-1:three_prime_utr;Parent=Msa1418690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
