Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492910 | XP_003598900.2 | 97.732 | 529 | 6 | 1 | 1 | 523 | 1 | 529 | 0.0 | 1074 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492910 | sp|Q9C9Z9|ELD1_ARATH | 75.835 | 509 | 94 | 9 | 24 | 513 | 26 | 524 | 0.0 | 745 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492910 | A0A396IMD8 | 97.732 | 529 | 6 | 1 | 1 | 523 | 1 | 529 | 0.0 | 1074 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006050 | Msa0492910 | -0.801220 | 9.980768e-49 | -8.615850e-47 |
| Msa0218860 | Msa0492910 | -0.807599 | 4.671176e-50 | -8.615850e-47 |
| Msa0492910 | Msa0973890 | -0.800003 | 1.766673e-48 | -8.615850e-47 |
| Msa0492910 | Msa1335500 | 0.805401 | 1.358733e-49 | -8.615850e-47 |
| Msa0492910 | Msa1336080 | -0.819582 | 1.077058e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492910 | MtrunA17_Chr3g0085851 | 97.732 | 529 | 6 | 1 | 1 | 523 | 1 | 529 | 0.0 | 1074 |
| Msa0492910 | MtrunA17_Chr7g0256941 | 72.973 | 481 | 118 | 6 | 41 | 511 | 29 | 507 | 0.0 | 734 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492910 | AT3G08550.1 | 75.835 | 509 | 94 | 9 | 24 | 513 | 26 | 524 | 0.0 | 745 |
| Msa0492910 | AT3G57200.1 | 66.529 | 484 | 136 | 7 | 41 | 513 | 39 | 507 | 0.0 | 654 |
| Msa0492910 | AT2G41451.1 | 68.192 | 437 | 128 | 5 | 19 | 448 | 2 | 434 | 0.0 | 632 |
| Msa0492910 | AT3G57200.2 | 72.613 | 398 | 100 | 4 | 41 | 430 | 39 | 435 | 0.0 | 609 |
| Msa0492910 | AT3G61030.1 | 76.562 | 64 | 15 | 0 | 321 | 384 | 293 | 356 | 9.69e-28 | 117 |
| Msa0492910 | AT3G60950.1 | 76.562 | 64 | 15 | 0 | 321 | 384 | 300 | 363 | 2.44e-27 | 116 |
Find 149 sgRNAs with CRISPR-Local
Find 483 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCCCTTATTACCATAAT+TGG | 0.147000 | 3_4:+17101634 | Msa0492910:CDS |
| CAAAATCAAGTTTCCAATTA+TGG | 0.186339 | 3_4:-17101647 | None:intergenic |
| TGCAGTTGCTTGAGATTCTT+TGG | 0.192455 | 3_4:-17108392 | None:intergenic |
| CATAATTGGAAACTTGATTT+TGG | 0.198179 | 3_4:+17101648 | Msa0492910:CDS |
| CCAAACTATTTCCTGACTTA+TGG | 0.199339 | 3_4:+17106771 | Msa0492910:CDS |
| AGTTTCCAATTATGGTAATA+AGG | 0.241190 | 3_4:-17101639 | None:intergenic |
| GGTTGATGGAATGTGTAAAT+TGG | 0.253048 | 3_4:-17101313 | None:intergenic |
| TCAAGACTTACCTCACTAAA+TGG | 0.272636 | 3_4:-17104880 | None:intergenic |
| ATTGTGAAAATTACATAAAA+TGG | 0.280938 | 3_4:-17108617 | None:intergenic |
| AGAAGTTAAATCTGAGAATT+TGG | 0.284393 | 3_4:-17107022 | None:intergenic |
| AGCAACTGCAAGGAAGGTTT+TGG | 0.300587 | 3_4:+17108405 | Msa0492910:CDS |
| ATCTTCTGTATTTCAAGAAT+TGG | 0.300912 | 3_4:+17108435 | Msa0492910:CDS |
| TGGGTTGACGGAGAGGGGTG+TGG | 0.311114 | 3_4:-17101371 | None:intergenic |
| GAGGGGTGTGGAGGTGGTTG+TGG | 0.319444 | 3_4:-17101359 | None:intergenic |
| TCCAAGACCTTTGATACTTC+AGG | 0.320025 | 3_4:-17103235 | None:intergenic |
| ATTGGCATGGTGGTGGTTGA+TGG | 0.321529 | 3_4:-17101327 | None:intergenic |
| TGGTTGTGGTGGTTGGTGAT+TGG | 0.326553 | 3_4:-17101345 | None:intergenic |
| AGTGAGGAGGAGGAGGATCT+TGG | 0.335209 | 3_4:-17101421 | None:intergenic |
| TGTAAAGCAGTCCCTCAATA+TGG | 0.342558 | 3_4:+17104436 | Msa0492910:CDS |
| TTGGTTGCATCAGCCGTATT+TGG | 0.345096 | 3_4:+17104360 | Msa0492910:intron |
| GTTATTTAACTAGGGAGTTA+AGG | 0.345813 | 3_4:+17103517 | Msa0492910:intron |
| GCTATAGTAGCGAGCGAGAC+AGG | 0.350225 | 3_4:-17101450 | None:intergenic |
| CCATAAGTCAGGAAATAGTT+TGG | 0.350514 | 3_4:-17106771 | None:intergenic |
| GGAGGAAGTGGTGGTGGAGG+TGG | 0.352089 | 3_4:-17101391 | None:intergenic |
| GTGGAGGTGGTTGTGGTGGT+TGG | 0.352596 | 3_4:-17101352 | None:intergenic |
| GTTCTTCCAACCTTTCTAGA+TGG | 0.361668 | 3_4:-17108370 | None:intergenic |
| CAGTTGCTTCTTGATGTTCC+AGG | 0.368006 | 3_4:+17104667 | Msa0492910:CDS |
| GTGCTCGGGAGTACTCTTTA+AGG | 0.369319 | 3_4:+17104644 | Msa0492910:CDS |
| GTTTCCAATTATGGTAATAA+GGG | 0.371204 | 3_4:-17101638 | None:intergenic |
| GAATGAGCAGTATGAGTAAG+AGG | 0.372471 | 3_4:-17101573 | None:intergenic |
| ATACAAAGTTTGAGGGAATC+TGG | 0.380986 | 3_4:+17108241 | Msa0492910:CDS |
| CAGGGAGGAGAGTGAGGAGG+AGG | 0.383225 | 3_4:-17101431 | None:intergenic |
| GGAGGTGGGTTGACGGAGAG+GGG | 0.383930 | 3_4:-17101376 | None:intergenic |
| TTATGCCAGTGAAATCAAAT+TGG | 0.387674 | 3_4:+17106969 | Msa0492910:intron |
| GTGGAGGTGGGTTGACGGAG+AGG | 0.388125 | 3_4:-17101378 | None:intergenic |
| CAAGATCACCTTCGGCCTAA+TGG | 0.388699 | 3_4:+17106819 | Msa0492910:CDS |
| GACGGAGAGGGGTGTGGAGG+TGG | 0.390186 | 3_4:-17101365 | None:intergenic |
| GTTGGTGATTGGCATGGTGG+TGG | 0.392077 | 3_4:-17101334 | None:intergenic |
| GTTGATGGAATGTGTAAATT+GGG | 0.406797 | 3_4:-17101312 | None:intergenic |
| GGTGAAGGAGGAAGTGGTGG+TGG | 0.413290 | 3_4:-17101397 | None:intergenic |
| TATGGAGATGGCTATTGTTA+TGG | 0.420092 | 3_4:+17104454 | Msa0492910:CDS |
| TCCTGAAGTATCAAAGGTCT+TGG | 0.422959 | 3_4:+17103234 | Msa0492910:CDS |
| GTTAGAAGAAGAATAAATCA+TGG | 0.424171 | 3_4:-17101241 | None:intergenic |
| TGGTGGTGGAGGTGGGTTGA+CGG | 0.425086 | 3_4:-17101383 | None:intergenic |
| GAGGATCTTGGAGGTGAAGG+AGG | 0.428081 | 3_4:-17101409 | None:intergenic |
| ATGCCAAAGTATGTATCCTT+TGG | 0.431181 | 3_4:-17106723 | None:intergenic |
| GTTGACGGAGAGGGGTGTGG+AGG | 0.433734 | 3_4:-17101368 | None:intergenic |
| GAGGAGGATCTTGGAGGTGA+AGG | 0.434104 | 3_4:-17101412 | None:intergenic |
| TGCCATCTGTGTGCACCATT+AGG | 0.440371 | 3_4:-17106834 | None:intergenic |
| GGAGGAGAGTGAGGAGGAGG+AGG | 0.440947 | 3_4:-17101428 | None:intergenic |
| CTATAGCTTTCATCCTTCAA+TGG | 0.443049 | 3_4:+17101466 | Msa0492910:CDS |
| ACCATGTCTCGTTCCAAATA+CGG | 0.446151 | 3_4:-17104373 | None:intergenic |
| GTATGAGTAAGAGGTGAAAG+AGG | 0.447506 | 3_4:-17101564 | None:intergenic |
| GAGCGCCATGAGGGGACAAA+AGG | 0.449288 | 3_4:-17101515 | None:intergenic |
| TGGAGGTGGGTTGACGGAGA+GGG | 0.449916 | 3_4:-17101377 | None:intergenic |
| GAAGGAGGAAGTGGTGGTGG+AGG | 0.451715 | 3_4:-17101394 | None:intergenic |
| GTGGTGGTTGGTGATTGGCA+TGG | 0.451745 | 3_4:-17101340 | None:intergenic |
| ATGTTGTAACATCAGGATTC+TGG | 0.452954 | 3_4:+17104571 | Msa0492910:intron |
| GAGGAAGTGGTGGTGGAGGT+GGG | 0.455629 | 3_4:-17101390 | None:intergenic |
| CTTCCAAAGGATACATACTT+TGG | 0.456860 | 3_4:+17106720 | Msa0492910:CDS |
| GGGTGTGGAGGTGGTTGTGG+TGG | 0.457231 | 3_4:-17101356 | None:intergenic |
| AATACACCCGGCTGGTGCTC+GGG | 0.459623 | 3_4:+17104630 | Msa0492910:CDS |
| CTTGGAGGTGAAGGAGGAAG+TGG | 0.464991 | 3_4:-17101403 | None:intergenic |
| ATGACCATATCAACATTTCC+TGG | 0.466467 | 3_4:-17104685 | None:intergenic |
| TTTATCTCTCCCATCTAGAA+AGG | 0.466984 | 3_4:+17108360 | Msa0492910:CDS |
| AGGTCATAATACAAAGTTTG+AGG | 0.467904 | 3_4:+17108233 | Msa0492910:intron |
| GTGGTTGGTGATTGGCATGG+TGG | 0.470538 | 3_4:-17101337 | None:intergenic |
| GGACAAAAGGGTCGCTGGAT+CGG | 0.476286 | 3_4:-17101502 | None:intergenic |
| TAATACACCCGGCTGGTGCT+CGG | 0.478581 | 3_4:+17104629 | Msa0492910:CDS |
| TTCTTCCAACCTTTCTAGAT+GGG | 0.480125 | 3_4:-17108369 | None:intergenic |
| ACCTATGAAAGAAGAAGAAA+AGG | 0.483183 | 3_4:-17108535 | None:intergenic |
| GAGGAGGAGGAGGATCTTGG+AGG | 0.485415 | 3_4:-17101418 | None:intergenic |
| CGCTCATAACTTCCCTGGCA+TGG | 0.485929 | 3_4:+17101533 | Msa0492910:CDS |
| TGTTCCAGGAAATGTTGATA+TGG | 0.486060 | 3_4:+17104681 | Msa0492910:CDS |
| TCTCTCCCATCTAGAAAGGT+TGG | 0.486642 | 3_4:+17108364 | Msa0492910:CDS |
| GGTCATAATACAAAGTTTGA+GGG | 0.489149 | 3_4:+17108234 | Msa0492910:intron |
| TCTTCTGATTGTCTTAACCT+TGG | 0.489575 | 3_4:+17101594 | Msa0492910:CDS |
| GGCTTGAGCAGATTCTTCCC+TGG | 0.492916 | 3_4:+17103146 | Msa0492910:CDS |
| CACGGGTACAAGATCACCTT+CGG | 0.495599 | 3_4:+17106811 | Msa0492910:CDS |
| AGAGGAGAAGAATCCATGCC+AGG | 0.500007 | 3_4:-17101546 | None:intergenic |
| TGATACCACCACGCCATTGA+AGG | 0.500955 | 3_4:-17101479 | None:intergenic |
| GACTTTATGATAAAACATCC+AGG | 0.507326 | 3_4:-17103164 | None:intergenic |
| CAATAGCCATCTCCATATTG+AGG | 0.509174 | 3_4:-17104448 | None:intergenic |
| AGTACTCCCGAGCACCAGCC+GGG | 0.511765 | 3_4:-17104636 | None:intergenic |
| GGCCTAATGGTGCACACAGA+TGG | 0.514465 | 3_4:+17106832 | Msa0492910:CDS |
| CATGGCGCTCATAACTTCCC+TGG | 0.518120 | 3_4:+17101528 | Msa0492910:CDS |
| ATCAGGATTCTGGTATGGAC+TGG | 0.520838 | 3_4:+17104581 | Msa0492910:intron |
| TTACTATCTTCTACTACTCC+TGG | 0.523605 | 3_4:-17108478 | None:intergenic |
| ATCTCAAGCAACTGCAAGGA+AGG | 0.523877 | 3_4:+17108399 | Msa0492910:CDS |
| TTATGGTAATAAGGGAAAGA+AGG | 0.524074 | 3_4:-17101630 | None:intergenic |
| GAGTACTCCCGAGCACCAGC+CGG | 0.526167 | 3_4:-17104637 | None:intergenic |
| TGAGGGGACAAAAGGGTCGC+TGG | 0.531479 | 3_4:-17101507 | None:intergenic |
| TATTTCCTGACTTATGGAAA+CGG | 0.534087 | 3_4:+17106777 | Msa0492910:CDS |
| AATAGCCATCTCCATATTGA+GGG | 0.536993 | 3_4:-17104447 | None:intergenic |
| GCGAGACAGGGAGGAGAGTG+AGG | 0.539660 | 3_4:-17101437 | None:intergenic |
| TGGTGGAGACTGCGGCGGTA+CGG | 0.539942 | 3_4:-17108458 | None:intergenic |
| TATATATAGAACAACACAGC+TGG | 0.542270 | 3_4:+17103541 | Msa0492910:CDS |
| CTGAAGAAGAAATGTTGAAG+TGG | 0.544491 | 3_4:+17107703 | Msa0492910:CDS |
| GTATAATGAGCATGTTGTGT+GGG | 0.550390 | 3_4:+17107832 | Msa0492910:CDS |
| TGCTACTCCTGAAGTATCAA+AGG | 0.550887 | 3_4:+17103228 | Msa0492910:CDS |
| TGGTGACTCACTTACTCCAA+AGG | 0.551192 | 3_4:+17101668 | Msa0492910:CDS |
| GGAGGTGAAGGAGGAAGTGG+TGG | 0.551372 | 3_4:-17101400 | None:intergenic |
| TCTAGATGGGAGAGATAAAG+AGG | 0.557303 | 3_4:-17108356 | None:intergenic |
| AGGTGAAGATTAAACTGTTG+AGG | 0.559338 | 3_4:+17107864 | Msa0492910:CDS |
| AAGATTAAACTGTTGAGGAA+AGG | 0.559419 | 3_4:+17107869 | Msa0492910:CDS |
| GCCGTATTTGGAACGAGACA+TGG | 0.561333 | 3_4:+17104372 | Msa0492910:intron |
| CAGTGAAATCAAATTGGAAG+AGG | 0.567599 | 3_4:+17106975 | Msa0492910:intron |
| TGTTGTGTGGGGTGATAAAG+AGG | 0.573372 | 3_4:+17107844 | Msa0492910:CDS |
| TGTCAAAAGATGCTTCATGT+TGG | 0.573644 | 3_4:+17107083 | Msa0492910:CDS |
| GTAACATCAGGATTCTGGTA+TGG | 0.573961 | 3_4:+17104576 | Msa0492910:intron |
| CTATAGTAGCGAGCGAGACA+GGG | 0.575163 | 3_4:-17101449 | None:intergenic |
| GTCACAAGTAGTACATCCGC+AGG | 0.576975 | 3_4:+17103124 | Msa0492910:CDS |
| AGATGGCTATTGTTATGGCA+AGG | 0.579026 | 3_4:+17104459 | Msa0492910:CDS |
| GCTTTCATCCTTCAATGGCG+TGG | 0.589303 | 3_4:+17101471 | Msa0492910:CDS |
| AGCGCCATGAGGGGACAAAA+GGG | 0.589512 | 3_4:-17101514 | None:intergenic |
| GAGGAGAAGAATCCATGCCA+GGG | 0.589850 | 3_4:-17101545 | None:intergenic |
| GAAACGGAAAATCAGTTGCA+CGG | 0.590916 | 3_4:+17106793 | Msa0492910:CDS |
| GTACCGCCGCAGTCTCCACC+AGG | 0.597199 | 3_4:+17108460 | Msa0492910:CDS |
| AAACGGAAAATCAGTTGCAC+GGG | 0.602924 | 3_4:+17106794 | Msa0492910:CDS |
| GATGGCTATTGTTATGGCAA+GGG | 0.603982 | 3_4:+17104460 | Msa0492910:CDS |
| GCAGTCCCTCAATATGGAGA+TGG | 0.605938 | 3_4:+17104442 | Msa0492910:CDS |
| AAGAATCTCAAGCAACTGCA+AGG | 0.610567 | 3_4:+17108395 | Msa0492910:CDS |
| GGAAGTTATGAGCGCCATGA+GGG | 0.617308 | 3_4:-17101524 | None:intergenic |
| TGGAAGAACAACAAGCTAAG+AGG | 0.617904 | 3_4:+17103561 | Msa0492910:CDS |
| TATGAAAGAAGAAGAAAAGG+TGG | 0.622110 | 3_4:-17108532 | None:intergenic |
| TTCATCCTTCAATGGCGTGG+TGG | 0.623517 | 3_4:+17101474 | Msa0492910:CDS |
| CTGATCATGAATGTGAAATG+AGG | 0.625746 | 3_4:-17108501 | None:intergenic |
| AAGGAGAAGAAGAACGACCA+AGG | 0.628701 | 3_4:-17101611 | None:intergenic |
| TACAGATGAATTAATACACC+CGG | 0.633055 | 3_4:+17104618 | Msa0492910:CDS |
| AGACAGGGAGGAGAGTGAGG+AGG | 0.634139 | 3_4:-17101434 | None:intergenic |
| TGTGTGCACCATTAGGCCGA+AGG | 0.634277 | 3_4:-17106827 | None:intergenic |
| GATGAATTAATACACCCGGC+TGG | 0.635621 | 3_4:+17104622 | Msa0492910:CDS |
| ACTTCTAGACGTGATCGCTG+TGG | 0.638563 | 3_4:+17107039 | Msa0492910:CDS |
| GACTCGCATATACACTCCCA+TGG | 0.640295 | 3_4:+17107898 | Msa0492910:CDS |
| GGTATAATGAGCATGTTGTG+TGG | 0.645998 | 3_4:+17107831 | Msa0492910:intron |
| TATTTGGAACGAGACATGGT+TGG | 0.650867 | 3_4:+17104376 | Msa0492910:CDS |
| ATGTACAAAGATTCTGTGCG+CGG | 0.654406 | 3_4:+17106744 | Msa0492910:CDS |
| TATCAAAGAACCATTTAGTG+AGG | 0.657586 | 3_4:+17104870 | Msa0492910:CDS |
| CTATCTTCTACTACTCCTGG+TGG | 0.658740 | 3_4:-17108475 | None:intergenic |
| GAATTATGATCATCTTCCAA+AGG | 0.659643 | 3_4:+17106707 | Msa0492910:CDS |
| ACTTTATGATAAAACATCCA+GGG | 0.660075 | 3_4:-17103163 | None:intergenic |
| GAAGTTATGAGCGCCATGAG+GGG | 0.675892 | 3_4:-17101523 | None:intergenic |
| GGGAAGTTATGAGCGCCATG+AGG | 0.676587 | 3_4:-17101525 | None:intergenic |
| TAGTAGCGAGCGAGACAGGG+AGG | 0.685763 | 3_4:-17101446 | None:intergenic |
| ACTACTCCTGGTGGAGACTG+CGG | 0.695103 | 3_4:-17108466 | None:intergenic |
| AAGAATCTGCTCAAGCCCTG+CGG | 0.700662 | 3_4:-17103140 | None:intergenic |
| TCACAAGTAGTACATCCGCA+GGG | 0.702932 | 3_4:+17103125 | Msa0492910:CDS |
| TATAATGAGCATGTTGTGTG+GGG | 0.716008 | 3_4:+17107833 | Msa0492910:CDS |
| ACTCCTGGTGGAGACTGCGG+CGG | 0.723608 | 3_4:-17108463 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAATTTTCTATAAAGTT+AGG | - | chr3_4:17102513-17102532 | None:intergenic | 10.0% |
| !!! | ATTACTAAAGTAAATTATTT+TGG | + | chr3_4:17102578-17102597 | Msa0492910:intron | 10.0% |
| !! | AAATTAGAATAATATCATTA+GGG | - | chr3_4:17103490-17103509 | None:intergenic | 10.0% |
| !!! | TAATAAAACACAATTTTTTT+AGG | + | chr3_4:17108707-17108726 | Msa0492910:three_prime_UTR | 10.0% |
| !!! | TTTGAATTATTTTGAATTGT+GGG | + | chr3_4:17101709-17101728 | Msa0492910:intron | 15.0% |
| !! | TAAATTGTGATGTAAAAATT+TGG | + | chr3_4:17101914-17101933 | Msa0492910:intron | 15.0% |
| !! | TGATTAGTAATTTAGTATAT+GGG | + | chr3_4:17101941-17101960 | Msa0492910:intron | 15.0% |
| !! | CAAATTAGAATAATATCATT+AGG | - | chr3_4:17103491-17103510 | None:intergenic | 15.0% |
| !! | CTAATGATATTATTCTAATT+TGG | + | chr3_4:17103489-17103508 | Msa0492910:intron | 15.0% |
| !!! | ACAAAATAAATTTTGACTTT+TGG | + | chr3_4:17105146-17105165 | Msa0492910:intron | 15.0% |
| !!! | TTTATATATTAGTTTCTTGA+CGG | + | chr3_4:17105174-17105193 | Msa0492910:intron | 15.0% |
| !! | CTAAATCTCAATTATATATA+TGG | + | chr3_4:17105204-17105223 | Msa0492910:intron | 15.0% |
| !! | TTAAAGTTCATAATAATTGA+TGG | + | chr3_4:17105481-17105500 | Msa0492910:intron | 15.0% |
| !!! | AAAATCCAATATTTGATTTA+CGG | - | chr3_4:17105695-17105714 | None:intergenic | 15.0% |
| !!! | TAAATCAAATATTGGATTTT+TGG | + | chr3_4:17105695-17105714 | Msa0492910:intron | 15.0% |
| !!! | TTGATTTTGTATTATACTTT+GGG | - | chr3_4:17106875-17106894 | None:intergenic | 15.0% |
| !!! | ATTGATTTTGTATTATACTT+TGG | - | chr3_4:17106876-17106895 | None:intergenic | 15.0% |
| !!! | TATTTTAATTAGTATCTTGA+TGG | + | chr3_4:17106936-17106955 | Msa0492910:intron | 15.0% |
| !!! | TAATATTTTCAGTTTACAAT+GGG | - | chr3_4:17107971-17107990 | None:intergenic | 15.0% |
| !! | ATTGTGAAAATTACATAAAA+TGG | - | chr3_4:17108620-17108639 | None:intergenic | 15.0% |
| !!! | CTTTGAATTATTTTGAATTG+TGG | + | chr3_4:17101708-17101727 | Msa0492910:intron | 20.0% |
| !!! | TTGAATTATTTTGAATTGTG+GGG | + | chr3_4:17101710-17101729 | Msa0492910:intron | 20.0% |
| !!! | ATTGTAACTTTTAAGCAAAA+GGG | + | chr3_4:17101760-17101779 | Msa0492910:intron | 20.0% |
| !! | GTGATTAGTAATTTAGTATA+TGG | + | chr3_4:17101940-17101959 | Msa0492910:intron | 20.0% |
| !!! | ATAATAGGGATTTTCATTTT+GGG | + | chr3_4:17102253-17102272 | Msa0492910:intron | 20.0% |
| !!! | TCTTTTGTTTTAAGGTATTT+TGG | + | chr3_4:17102444-17102463 | Msa0492910:intron | 20.0% |
| !!! | ATTTAAGATTTAGTACTAGA+TGG | + | chr3_4:17102531-17102550 | Msa0492910:intron | 20.0% |
| !!! | TTTAAGATTTAGTACTAGAT+GGG | + | chr3_4:17102532-17102551 | Msa0492910:intron | 20.0% |
| !! | CTAAATTATGTTATTAGTAC+TGG | + | chr3_4:17102834-17102853 | Msa0492910:intron | 20.0% |
| !!! | ATGTTTTATCATAAAGTCAT+TGG | + | chr3_4:17103169-17103188 | Msa0492910:CDS | 20.0% |
| !!! | TTGGTTTATGTTATTTAACT+AGG | + | chr3_4:17103508-17103527 | Msa0492910:intron | 20.0% |
| !!! | TGGTTTATGTTATTTAACTA+GGG | + | chr3_4:17103509-17103528 | Msa0492910:intron | 20.0% |
| !! | GATGAGATTCAATAATAAAA+TGG | - | chr3_4:17103600-17103619 | None:intergenic | 20.0% |
| !! | AATTGCAAAATCAATTCAAA+AGG | - | chr3_4:17103622-17103641 | None:intergenic | 20.0% |
| !!! | TTGATTTTGCAATTTTCAAT+TGG | + | chr3_4:17103628-17103647 | Msa0492910:intron | 20.0% |
| !! | ACAAGGGAAAAAAAAAATTA+TGG | - | chr3_4:17104205-17104224 | None:intergenic | 20.0% |
| !!! | GTTATACTTTTTATATGACA+TGG | + | chr3_4:17104229-17104248 | Msa0492910:intron | 20.0% |
| !! | ATACTGATAATATAAGTTGT+TGG | + | chr3_4:17104341-17104360 | Msa0492910:intron | 20.0% |
| !!! | TTATTGTTTTCTGTGTAATT+TGG | + | chr3_4:17104527-17104546 | Msa0492910:intron | 20.0% |
| !!! | TGATTTTCATTTATAAGTTG+TGG | + | chr3_4:17104754-17104773 | Msa0492910:intron | 20.0% |
| !!! | TTTTATATTATCAGCATACT+TGG | - | chr3_4:17105056-17105075 | None:intergenic | 20.0% |
| !!! | CATTTAATTTCTTGATTTCT+TGG | - | chr3_4:17105562-17105581 | None:intergenic | 20.0% |
| !! | TGATTTACGGTAAATAAAAT+TGG | - | chr3_4:17105682-17105701 | None:intergenic | 20.0% |
| !! | ATTTACCGTAAATCAAATAT+TGG | + | chr3_4:17105687-17105706 | Msa0492910:intron | 20.0% |
| !!! | GAAAGTTGAATTTTAGATTA+AGG | + | chr3_4:17105932-17105951 | Msa0492910:intron | 20.0% |
| !! | AGTTAAACAAGATTTCTATT+TGG | + | chr3_4:17106210-17106229 | Msa0492910:intron | 20.0% |
| !! | GTTAAACAAGATTTCTATTT+GGG | + | chr3_4:17106211-17106230 | Msa0492910:intron | 20.0% |
| !! | TTAAACAAGATTTCTATTTG+GGG | + | chr3_4:17106212-17106231 | Msa0492910:intron | 20.0% |
| !!! | TGATTTTGTATTATACTTTG+GGG | - | chr3_4:17106874-17106893 | None:intergenic | 20.0% |
| !!! | GGTATTATTATTTTGCTTTA+AGG | + | chr3_4:17107215-17107234 | Msa0492910:intron | 20.0% |
| !!! | TATTATTTTGCTTTAAGGTT+TGG | + | chr3_4:17107220-17107239 | Msa0492910:intron | 20.0% |
| !!! | GTAATATTTTCAGTTTACAA+TGG | - | chr3_4:17107972-17107991 | None:intergenic | 20.0% |
| !! | ATAAGTCAAATATGTAGAAA+TGG | - | chr3_4:17108171-17108190 | None:intergenic | 20.0% |
| !!! | ACAATTTTTTTAGGCATAAA+GGG | + | chr3_4:17108716-17108735 | Msa0492910:three_prime_UTR | 20.0% |
| ! | GTTAGAAGAAGAATAAATCA+TGG | - | chr3_4:17101244-17101263 | None:intergenic | 25.0% |
| ! | GTTTCCAATTATGGTAATAA+GGG | - | chr3_4:17101641-17101660 | None:intergenic | 25.0% |
| ! | AGTTTCCAATTATGGTAATA+AGG | - | chr3_4:17101642-17101661 | None:intergenic | 25.0% |
| ! | CAAAATCAAGTTTCCAATTA+TGG | - | chr3_4:17101650-17101669 | None:intergenic | 25.0% |
| !! | CATAATTGGAAACTTGATTT+TGG | + | chr3_4:17101648-17101667 | Msa0492910:CDS | 25.0% |
| ! | AGCTAAAAAAAACAAACCTT+TGG | - | chr3_4:17101687-17101706 | None:intergenic | 25.0% |
| !! | GATTGTAACTTTTAAGCAAA+AGG | + | chr3_4:17101759-17101778 | Msa0492910:intron | 25.0% |
| !! | TTTTGTGTTTTGTATCATTC+TGG | + | chr3_4:17101812-17101831 | Msa0492910:intron | 25.0% |
| !! | TTTGTGTTTTGTATCATTCT+GGG | + | chr3_4:17101813-17101832 | Msa0492910:intron | 25.0% |
| ! | TTGTGATGTAAAAATTTGGT+TGG | + | chr3_4:17101918-17101937 | Msa0492910:intron | 25.0% |
| ! | TAGTAATTTAGTATATGGGA+TGG | + | chr3_4:17101945-17101964 | Msa0492910:intron | 25.0% |
| ! | AGTAATTTAGTATATGGGAT+GGG | + | chr3_4:17101946-17101965 | Msa0492910:intron | 25.0% |
| !! | CATAATAGGGATTTTCATTT+TGG | + | chr3_4:17102252-17102271 | Msa0492910:intron | 25.0% |
| ! | ATTAGTTATGAGGATAATGA+AGG | + | chr3_4:17102386-17102405 | Msa0492910:intron | 25.0% |
| ! | TTAGTTATGAGGATAATGAA+GGG | + | chr3_4:17102387-17102406 | Msa0492910:intron | 25.0% |
| !!! | GTTGTTGTTCTTTTGTTTTA+AGG | + | chr3_4:17102436-17102455 | Msa0492910:intron | 25.0% |
| !!! | TTTTGTTTAAGATTTAGTCC+TGG | + | chr3_4:17102787-17102806 | Msa0492910:intron | 25.0% |
| !! | TTTGTTTAAGATTTAGTCCT+GGG | + | chr3_4:17102788-17102807 | Msa0492910:intron | 25.0% |
| !!! | TTTTGTTGAAGATTGTTTCT+AGG | + | chr3_4:17102939-17102958 | Msa0492910:intron | 25.0% |
| !!! | GGTTTAAGCTATTTTATACA+CGG | + | chr3_4:17102980-17102999 | Msa0492910:intron | 25.0% |
| ! | ATCTACAAAAAAATGAAACG+CGG | - | chr3_4:17103017-17103036 | None:intergenic | 25.0% |
| ! | ACTTTATGATAAAACATCCA+GGG | - | chr3_4:17103166-17103185 | None:intergenic | 25.0% |
| !!! | AACAAACTTTTTTCTCTTTG+TGG | + | chr3_4:17103195-17103214 | Msa0492910:CDS | 25.0% |
| !!! | ATTTATGTTTTGATACGTTG+AGG | + | chr3_4:17103372-17103391 | Msa0492910:intron | 25.0% |
| ! | GTTCTATTCATCTTAGTATT+AGG | + | chr3_4:17103423-17103442 | Msa0492910:intron | 25.0% |
| !! | TTGCAATTTTCAATTGGTTA+TGG | + | chr3_4:17103634-17103653 | Msa0492910:intron | 25.0% |
| ! | AAATTCAAATTGGGAAACTT+TGG | - | chr3_4:17103666-17103685 | None:intergenic | 25.0% |
| ! | AGCATGTCTAAATTCAAATT+GGG | - | chr3_4:17103675-17103694 | None:intergenic | 25.0% |
| ! | AAGCATGTCTAAATTCAAAT+TGG | - | chr3_4:17103676-17103695 | None:intergenic | 25.0% |
| ! | GATAACACTGTTAGTAAATA+TGG | + | chr3_4:17103730-17103749 | Msa0492910:intron | 25.0% |
| !! | TTTTCTTTTCTTTTCTCCTA+TGG | - | chr3_4:17103759-17103778 | None:intergenic | 25.0% |
| ! | TTACATTCATCGATATAATG+TGG | - | chr3_4:17103791-17103810 | None:intergenic | 25.0% |
| ! | ATCAATGCTTAATCACAATA+AGG | + | chr3_4:17104051-17104070 | Msa0492910:intron | 25.0% |
| !! | GTTAATATTTTGTCCTTTGT+TGG | - | chr3_4:17104098-17104117 | None:intergenic | 25.0% |
| !! | AGCATTGTAGTTTTTGTTAA+GGG | - | chr3_4:17104154-17104173 | None:intergenic | 25.0% |
| !! | AAAAAGTATAACACAGACAA+GGG | - | chr3_4:17104221-17104240 | None:intergenic | 25.0% |
| !! | TAAAAAGTATAACACAGACA+AGG | - | chr3_4:17104222-17104241 | None:intergenic | 25.0% |
| ! | ACAAAAAGTTCATAATTGCA+TGG | - | chr3_4:17104419-17104438 | None:intergenic | 25.0% |
| ! | CATATAATCATATGATAAGC+TGG | - | chr3_4:17104977-17104996 | None:intergenic | 25.0% |
| ! | TTTAGATTTATGACATGAAC+TGG | + | chr3_4:17105274-17105293 | Msa0492910:intron | 25.0% |
| ! | CATTTAGCTAAAAGAAAAAC+TGG | + | chr3_4:17105651-17105670 | Msa0492910:intron | 25.0% |
| !! | TGGTATATCTCTTACAATTT+TGG | - | chr3_4:17105783-17105802 | None:intergenic | 25.0% |
| !!! | TCAGTATAACTTGTTCATAA+AGG | - | chr3_4:17105879-17105898 | None:intergenic | 25.0% |
| ! | ACTTTCTTTAATCCAAGAAT+GGG | - | chr3_4:17105918-17105937 | None:intergenic | 25.0% |
| ! | AACTTTCTTTAATCCAAGAA+TGG | - | chr3_4:17105919-17105938 | None:intergenic | 25.0% |
| !! | GTTGAATTTTAGATTAAGGT+TGG | + | chr3_4:17105936-17105955 | Msa0492910:intron | 25.0% |
| !!! | AATTTTAGATTAAGGTTGGT+GGG | + | chr3_4:17105940-17105959 | Msa0492910:intron | 25.0% |
| ! | TTGTATGACTTTATAAGCAT+TGG | + | chr3_4:17106130-17106149 | Msa0492910:intron | 25.0% |
| !! | TTCTAAATGTCATTTGATTG+AGG | + | chr3_4:17106266-17106285 | Msa0492910:intron | 25.0% |
| !! | TCTAAATGTCATTTGATTGA+GGG | + | chr3_4:17106267-17106286 | Msa0492910:intron | 25.0% |
| !! | TTCTGGTAAAAGTATAAGAA+TGG | - | chr3_4:17106374-17106393 | None:intergenic | 25.0% |
| !! | ATACTTTTACCAGAATGAAA+AGG | + | chr3_4:17106379-17106398 | Msa0492910:intron | 25.0% |
| !! | TACTTTTACCAGAATGAAAA+GGG | + | chr3_4:17106380-17106399 | Msa0492910:intron | 25.0% |
| ! | CTCGTCATATGAAATTAATT+GGG | + | chr3_4:17106512-17106531 | Msa0492910:intron | 25.0% |
| !! | TATGTGTATGTTTTGTGTTT+TGG | + | chr3_4:17106568-17106587 | Msa0492910:intron | 25.0% |
| ! | AGAAGTTAAATCTGAGAATT+TGG | - | chr3_4:17107025-17107044 | None:intergenic | 25.0% |
| ! | TTTAATGTAATCACATGTGT+TGG | + | chr3_4:17107447-17107466 | Msa0492910:intron | 25.0% |
| ! | AAGTAGACTTTATCAATTTC+AGG | + | chr3_4:17107656-17107675 | Msa0492910:intron | 25.0% |
| ! | CAGGAAGATTAATAACATAA+TGG | - | chr3_4:17107783-17107802 | None:intergenic | 25.0% |
| ! | AATAACTTATCACTTACCAT+GGG | - | chr3_4:17107917-17107936 | None:intergenic | 25.0% |
| ! | TAATAACTTATCACTTACCA+TGG | - | chr3_4:17107918-17107937 | None:intergenic | 25.0% |
| ! | ATGGTAAGTGATAAGTTATT+AGG | + | chr3_4:17107917-17107936 | Msa0492910:intron | 25.0% |
| ! | TGGTAAGTGATAAGTTATTA+GGG | + | chr3_4:17107918-17107937 | Msa0492910:intron | 25.0% |
| ! | GATTCAAATCTCTCTATTAA+TGG | + | chr3_4:17108008-17108027 | Msa0492910:intron | 25.0% |
| ! | AGTAGAGTTGTTAAAAATAG+AGG | + | chr3_4:17108116-17108135 | Msa0492910:intron | 25.0% |
| !! | TGAATGCAAAAACTTTTCTT+TGG | - | chr3_4:17108305-17108324 | None:intergenic | 25.0% |
| ! | ATCTTCTGTATTTCAAGAAT+TGG | + | chr3_4:17108435-17108454 | Msa0492910:CDS | 25.0% |
| !!! | CACAATTTTTTTAGGCATAA+AGG | + | chr3_4:17108715-17108734 | Msa0492910:three_prime_UTR | 25.0% |
| ! | GTTGATGGAATGTGTAAATT+GGG | - | chr3_4:17101315-17101334 | None:intergenic | 30.0% |
| TTATGGTAATAAGGGAAAGA+AGG | - | chr3_4:17101633-17101652 | None:intergenic | 30.0% | |
| CTTTCCCTTATTACCATAAT+TGG | + | chr3_4:17101634-17101653 | Msa0492910:CDS | 30.0% | |
| ! | TAACTTTTAAGCAAAAGGGT+TGG | + | chr3_4:17101764-17101783 | Msa0492910:intron | 30.0% |
| GATCTGTAGATTATGTAGTA+AGG | + | chr3_4:17101997-17102016 | Msa0492910:intron | 30.0% | |
| TAGAGTAGTCAAATTACTAG+AGG | + | chr3_4:17102040-17102059 | Msa0492910:intron | 30.0% | |
| ! | TGGTATATGATAGAGCATTA+TGG | + | chr3_4:17102132-17102151 | Msa0492910:intron | 30.0% |
| ! | GGTATATGATAGAGCATTAT+GGG | + | chr3_4:17102133-17102152 | Msa0492910:intron | 30.0% |
| ! | AATGCTTGATTGTTGTTGTA+TGG | + | chr3_4:17102201-17102220 | Msa0492910:intron | 30.0% |
| GTAACTTTGATCAAAAGAGA+TGG | + | chr3_4:17102226-17102245 | Msa0492910:intron | 30.0% | |
| AAAAGAGATGGCTTCATAAT+AGG | + | chr3_4:17102238-17102257 | Msa0492910:intron | 30.0% | |
| AAAGAGATGGCTTCATAATA+GGG | + | chr3_4:17102239-17102258 | Msa0492910:intron | 30.0% | |
| !! | ACGTGATCTGTGTTTTAAAT+TGG | + | chr3_4:17102339-17102358 | Msa0492910:intron | 30.0% |
| !! | CGTGATCTGTGTTTTAAATT+GGG | + | chr3_4:17102340-17102359 | Msa0492910:intron | 30.0% |
| ! | TTTGTTGCTGATTAGTTATG+AGG | + | chr3_4:17102376-17102395 | Msa0492910:intron | 30.0% |
| ! | TTTTGTTAGTGAGGTTTATG+AGG | + | chr3_4:17102659-17102678 | Msa0492910:intron | 30.0% |
| TCTACAAAAAAATGAAACGC+GGG | - | chr3_4:17103016-17103035 | None:intergenic | 30.0% | |
| TGCTCATCAAGAAGAAAATA+TGG | - | chr3_4:17103097-17103116 | None:intergenic | 30.0% | |
| GACTTTATGATAAAACATCC+AGG | - | chr3_4:17103167-17103186 | None:intergenic | 30.0% | |
| !!! | AAACTTTTTTCTCTTTGTGG+AGG | + | chr3_4:17103198-17103217 | Msa0492910:CDS | 30.0% |
| !!! | AACTTTTTTCTCTTTGTGGA+GGG | + | chr3_4:17103199-17103218 | Msa0492910:CDS | 30.0% |
| TTTAGTTGAAAACGAGTTCA+AGG | + | chr3_4:17103335-17103354 | Msa0492910:intron | 30.0% | |
| ATCATTAGGGAAGAGAAATA+AGG | - | chr3_4:17103477-17103496 | None:intergenic | 30.0% | |
| GTTATTTAACTAGGGAGTTA+AGG | + | chr3_4:17103517-17103536 | Msa0492910:intron | 30.0% | |
| TATATATAGAACAACACAGC+TGG | + | chr3_4:17103541-17103560 | Msa0492910:CDS | 30.0% | |
| ATTTACTAACAGTGTTATCG+CGG | - | chr3_4:17103729-17103748 | None:intergenic | 30.0% | |
| TTAGTAAATATGGCATCCAT+AGG | + | chr3_4:17103740-17103759 | Msa0492910:intron | 30.0% | |
| TAGAAAACTAACTGCTAACT+AGG | + | chr3_4:17103864-17103883 | Msa0492910:intron | 30.0% | |
| !! | GATATCAGTAGTTGGTAATA+AGG | - | chr3_4:17103893-17103912 | None:intergenic | 30.0% |
| GTATTAGAGATATCAGTAGT+TGG | - | chr3_4:17103901-17103920 | None:intergenic | 30.0% | |
| AAAAAATCAACGACAAATGC+TGG | + | chr3_4:17103993-17104012 | Msa0492910:intron | 30.0% | |
| AAAAATCAACGACAAATGCT+GGG | + | chr3_4:17103994-17104013 | Msa0492910:intron | 30.0% | |
| ! | GCATTGTAGTTTTTGTTAAG+GGG | - | chr3_4:17104153-17104172 | None:intergenic | 30.0% |
| !! | GAGCATTGTAGTTTTTGTTA+AGG | - | chr3_4:17104155-17104174 | None:intergenic | 30.0% |
| TTTATGCATGTTGTAACATC+AGG | + | chr3_4:17104564-17104583 | Msa0492910:intron | 30.0% | |
| TACAGATGAATTAATACACC+CGG | + | chr3_4:17104618-17104637 | Msa0492910:CDS | 30.0% | |
| TCATTTATAAGTTGTGGAAC+TGG | + | chr3_4:17104760-17104779 | Msa0492910:intron | 30.0% | |
| ! | TCTATCAGTCTTCTTTTTCT+AGG | + | chr3_4:17104825-17104844 | Msa0492910:intron | 30.0% |
| TATCAAAGAACCATTTAGTG+AGG | + | chr3_4:17104870-17104889 | Msa0492910:CDS | 30.0% | |
| TGAACTTTAAGTCATTGCAT+CGG | - | chr3_4:17105471-17105490 | None:intergenic | 30.0% | |
| !! | ATAATTGATGGTGCATTACT+AGG | + | chr3_4:17105493-17105512 | Msa0492910:intron | 30.0% |
| TAGCTAAATGATACTCTGTA+CGG | - | chr3_4:17105641-17105660 | None:intergenic | 30.0% | |
| ACAAACTAACCCAAAAACTT+TGG | - | chr3_4:17105837-17105856 | None:intergenic | 30.0% | |
| CTTTCTTTAATCCAAGAATG+GGG | - | chr3_4:17105917-17105936 | None:intergenic | 30.0% | |
| ! | GAATTTTAGATTAAGGTTGG+TGG | + | chr3_4:17105939-17105958 | Msa0492910:intron | 30.0% |
| AGTCCATACTTTAAATCCAA+AGG | + | chr3_4:17105972-17105991 | Msa0492910:intron | 30.0% | |
| ! | AGACCTTTGGATTTAAAGTA+TGG | - | chr3_4:17105978-17105997 | None:intergenic | 30.0% |
| !! | TCACCTATTGATTTGATCTT+TGG | + | chr3_4:17106049-17106068 | Msa0492910:intron | 30.0% |
| !! | CACCTATTGATTTGATCTTT+GGG | + | chr3_4:17106050-17106069 | Msa0492910:intron | 30.0% |
| ATCCCAAAGATCAAATCAAT+AGG | - | chr3_4:17106055-17106074 | None:intergenic | 30.0% | |
| ! | AAAACCTAATGCTCTTTTCA+TGG | - | chr3_4:17106112-17106131 | None:intergenic | 30.0% |
| !!! | ACAGTTTTTTTCTCTTAGCT+GGG | - | chr3_4:17106309-17106328 | None:intergenic | 30.0% |
| !!! | TACAGTTTTTTTCTCTTAGC+TGG | - | chr3_4:17106310-17106329 | None:intergenic | 30.0% |
| ! | AATCTAATCCCTTTTCATTC+TGG | - | chr3_4:17106391-17106410 | None:intergenic | 30.0% |
| GCTCGTCATATGAAATTAAT+TGG | + | chr3_4:17106511-17106530 | Msa0492910:intron | 30.0% | |
| !!! | TTTTGTGTTTTGGCTGAATT+AGG | + | chr3_4:17106578-17106597 | Msa0492910:intron | 30.0% |
| GAATTATGATCATCTTCCAA+AGG | + | chr3_4:17106707-17106726 | Msa0492910:CDS | 30.0% | |
| TATTTCCTGACTTATGGAAA+CGG | + | chr3_4:17106777-17106796 | Msa0492910:CDS | 30.0% | |
| TTATGCCAGTGAAATCAAAT+TGG | + | chr3_4:17106969-17106988 | Msa0492910:intron | 30.0% | |
| ! | CTTTTGACATCTTCTTTTGT+AGG | - | chr3_4:17107072-17107091 | None:intergenic | 30.0% |
| ! | AATTCAGTTTTCACTTGGAT+TGG | + | chr3_4:17107162-17107181 | Msa0492910:intron | 30.0% |
| ! | ATTCAGTTTTCACTTGGATT+GGG | + | chr3_4:17107163-17107182 | Msa0492910:intron | 30.0% |
| AAGCAAAATAATAATACCCC+CGG | - | chr3_4:17107213-17107232 | None:intergenic | 30.0% | |
| GGAAGAGATCATAAATGAAT+AGG | - | chr3_4:17107745-17107764 | None:intergenic | 30.0% | |
| TAATGGTTAAGAAATCGAAG+AGG | - | chr3_4:17107766-17107785 | None:intergenic | 30.0% | |
| AAGATTAAACTGTTGAGGAA+AGG | + | chr3_4:17107869-17107888 | Msa0492910:CDS | 30.0% | |
| GAAGAGAATAAAGAAAACCA+AGG | + | chr3_4:17107940-17107959 | Msa0492910:intron | 30.0% | |
| TCTCTATTAATGGCTCATAA+TGG | + | chr3_4:17108018-17108037 | Msa0492910:intron | 30.0% | |
| ATTAATGGCTCATAATGGTA+TGG | + | chr3_4:17108023-17108042 | Msa0492910:intron | 30.0% | |
| AGGTCATAATACAAAGTTTG+AGG | + | chr3_4:17108233-17108252 | Msa0492910:intron | 30.0% | |
| GGTCATAATACAAAGTTTGA+GGG | + | chr3_4:17108234-17108253 | Msa0492910:intron | 30.0% | |
| !! | ACTTTTCTTTGGAAAGTGAT+GGG | - | chr3_4:17108294-17108313 | None:intergenic | 30.0% |
| !! | AACTTTTCTTTGGAAAGTGA+TGG | - | chr3_4:17108295-17108314 | None:intergenic | 30.0% |
| TATGAAAGAAGAAGAAAAGG+TGG | - | chr3_4:17108535-17108554 | None:intergenic | 30.0% | |
| ! | ACCTTTTCTTCTTCTTTCAT+AGG | + | chr3_4:17108534-17108553 | Msa0492910:three_prime_UTR | 30.0% |
| ACCTATGAAAGAAGAAGAAA+AGG | - | chr3_4:17108538-17108557 | None:intergenic | 30.0% | |
| !! | GGTTGATGGAATGTGTAAAT+TGG | - | chr3_4:17101316-17101335 | None:intergenic | 35.0% |
| CTATAGCTTTCATCCTTCAA+TGG | + | chr3_4:17101466-17101485 | Msa0492910:CDS | 35.0% | |
| TCTTCTGATTGTCTTAACCT+TGG | + | chr3_4:17101594-17101613 | Msa0492910:CDS | 35.0% | |
| !! | CAAAAGGGTTGGCTTTATAA+TGG | + | chr3_4:17101775-17101794 | Msa0492910:intron | 35.0% |
| ! | TTTGATGATCTGTGTGATCT+TGG | + | chr3_4:17101836-17101855 | Msa0492910:intron | 35.0% |
| !! | GTCAATTTTAGTAGTTCTGC+TGG | + | chr3_4:17101865-17101884 | Msa0492910:intron | 35.0% |
| ! | TTAGTATATGGGATGGGTTT+AGG | + | chr3_4:17101952-17101971 | Msa0492910:intron | 35.0% |
| ! | AGTCAAATTACTAGAGGCAT+AGG | + | chr3_4:17102046-17102065 | Msa0492910:intron | 35.0% |
| AGAACTAGAGATTAATGTGC+TGG | + | chr3_4:17102100-17102119 | Msa0492910:intron | 35.0% | |
| TAATGTGCTGGATGGAAATA+TGG | + | chr3_4:17102112-17102131 | Msa0492910:intron | 35.0% | |
| AAGCATTATCCCATTAAGTG+GGG | - | chr3_4:17102188-17102207 | None:intergenic | 35.0% | |
| CAAGCATTATCCCATTAAGT+GGG | - | chr3_4:17102189-17102208 | None:intergenic | 35.0% | |
| TCAAGCATTATCCCATTAAG+TGG | - | chr3_4:17102190-17102209 | None:intergenic | 35.0% | |
| TTAGTCAATGTTCCTAGTTG+CGG | + | chr3_4:17102303-17102322 | Msa0492910:intron | 35.0% | |
| !! | GTTTTAAATTGGGCTGATGT+AGG | + | chr3_4:17102350-17102369 | Msa0492910:intron | 35.0% |
| !! | TTGGCTAGTTCTGATATTTG+AGG | + | chr3_4:17102597-17102616 | Msa0492910:intron | 35.0% |
| ATTCATAAACGCAGATCACA+TGG | - | chr3_4:17102623-17102642 | None:intergenic | 35.0% | |
| ATGTGATCTGCGTTTATGAA+TGG | + | chr3_4:17102622-17102641 | Msa0492910:intron | 35.0% | |
| TGTGATCTGCGTTTATGAAT+GGG | + | chr3_4:17102623-17102642 | Msa0492910:intron | 35.0% | |
| !!! | ACGTAGAAGTTTTGTTAGTG+AGG | + | chr3_4:17102650-17102669 | Msa0492910:intron | 35.0% |
| GAGGTTTATGAGGATAATGA+AGG | + | chr3_4:17102669-17102688 | Msa0492910:intron | 35.0% | |
| AACACATCAAACACAGATCA+TGG | - | chr3_4:17102892-17102911 | None:intergenic | 35.0% | |
| !!! | AGGAGTTTTTTAGTGTTCTC+AGG | + | chr3_4:17102959-17102978 | Msa0492910:intron | 35.0% |
| AAAAAATGAAACGCGGGAAA+CGG | - | chr3_4:17103010-17103029 | None:intergenic | 35.0% | |
| !! | TATCAAGTGTCTGTCACTTT+CGG | + | chr3_4:17103058-17103077 | Msa0492910:intron | 35.0% |
| !!! | ACTTTTTTCTCTTTGTGGAG+GGG | + | chr3_4:17103200-17103219 | Msa0492910:CDS | 35.0% |
| TTTACTAACAGTGTTATCGC+GGG | - | chr3_4:17103728-17103747 | None:intergenic | 35.0% | |
| ACAAAAGTTGTCCTTACGTT+CGG | + | chr3_4:17103824-17103843 | Msa0492910:intron | 35.0% | |
| ! | GTTTTCTAGATGTAGGATGT+AGG | - | chr3_4:17103852-17103871 | None:intergenic | 35.0% |
| !!! | GCAGTTAGTTTTCTAGATGT+AGG | - | chr3_4:17103859-17103878 | None:intergenic | 35.0% |
| CAAATCATCAAAGCCAACAA+AGG | + | chr3_4:17104082-17104101 | Msa0492910:intron | 35.0% | |
| GAGTTGTGACTTCTACTTAA+TGG | - | chr3_4:17104120-17104139 | None:intergenic | 35.0% | |
| TAAGTAGAAGTCACAACTCA+AGG | + | chr3_4:17104121-17104140 | Msa0492910:intron | 35.0% | |
| AGTTCCTTAGTTTCTACAAG+TGG | + | chr3_4:17104310-17104329 | Msa0492910:intron | 35.0% | |
| GTTCCTTAGTTTCTACAAGT+GGG | + | chr3_4:17104311-17104330 | Msa0492910:intron | 35.0% | |
| AATCCCACTTGTAGAAACTA+AGG | - | chr3_4:17104317-17104336 | None:intergenic | 35.0% | |
| AATAGCCATCTCCATATTGA+GGG | - | chr3_4:17104450-17104469 | None:intergenic | 35.0% | |
| TATGGAGATGGCTATTGTTA+TGG | + | chr3_4:17104454-17104473 | Msa0492910:CDS | 35.0% | |
| ATGTTGTAACATCAGGATTC+TGG | + | chr3_4:17104571-17104590 | Msa0492910:intron | 35.0% | |
| TGTTCCAGGAAATGTTGATA+TGG | + | chr3_4:17104681-17104700 | Msa0492910:CDS | 35.0% | |
| ATGACCATATCAACATTTCC+TGG | - | chr3_4:17104688-17104707 | None:intergenic | 35.0% | |
| CAGATTCTACTCACATAGTT+AGG | - | chr3_4:17104715-17104734 | None:intergenic | 35.0% | |
| TCAAGACTTACCTCACTAAA+TGG | - | chr3_4:17104883-17104902 | None:intergenic | 35.0% | |
| TTATCAGCATACTTGGTTGA+AGG | - | chr3_4:17105049-17105068 | None:intergenic | 35.0% | |
| !!! | CTAGTTTTGTGCTTTAGTTG+TGG | + | chr3_4:17105229-17105248 | Msa0492910:intron | 35.0% |
| ! | TAGAGTGGACAAGTTTTTGA+AGG | + | chr3_4:17105312-17105331 | Msa0492910:intron | 35.0% |
| !! | TTTAGCTTTCTTAGCTGAGT+AGG | + | chr3_4:17105392-17105411 | Msa0492910:intron | 35.0% |
| TTTCTTAGCTGAGTAGGATA+GGG | + | chr3_4:17105398-17105417 | Msa0492910:intron | 35.0% | |
| ACAAATACTCCATGTCTTGT+AGG | + | chr3_4:17105528-17105547 | Msa0492910:intron | 35.0% | |
| AGAGACAAGAAGGGTTATTA+TGG | - | chr3_4:17105803-17105822 | None:intergenic | 35.0% | |
| ! | ACCTAACAGCCAAAGTTTTT+GGG | + | chr3_4:17105825-17105844 | Msa0492910:intron | 35.0% |
| !!! | GATTCTTTTTTCCCCATTCT+TGG | + | chr3_4:17105903-17105922 | Msa0492910:intron | 35.0% |
| ! | TTAAAGTATGGACTATGCAC+AGG | - | chr3_4:17105966-17105985 | None:intergenic | 35.0% |
| !! | ATGACTTTATAAGCATTGGC+AGG | + | chr3_4:17106134-17106153 | Msa0492910:intron | 35.0% |
| ! | TGGCAGGTATTTTATATGCT+AGG | + | chr3_4:17106150-17106169 | Msa0492910:intron | 35.0% |
| TGCTAGGATGAATATATCGA+TGG | + | chr3_4:17106166-17106185 | Msa0492910:intron | 35.0% | |
| ACTCAAAACTGATGCTATGA+TGG | + | chr3_4:17106339-17106358 | Msa0492910:intron | 35.0% | |
| ATTTCATATGACGAGCCAAA+GGG | - | chr3_4:17106507-17106526 | None:intergenic | 35.0% | |
| AATTTCATATGACGAGCCAA+AGG | - | chr3_4:17106508-17106527 | None:intergenic | 35.0% | |
| TTGGGTAGAAGAATCTGTAA+AGG | + | chr3_4:17106530-17106549 | Msa0492910:intron | 35.0% | |
| GACGGATCAAAAAAGAAAGA+GGG | - | chr3_4:17106663-17106682 | None:intergenic | 35.0% | |
| AGACGGATCAAAAAAGAAAG+AGG | - | chr3_4:17106664-17106683 | None:intergenic | 35.0% | |
| CTTCCAAAGGATACATACTT+TGG | + | chr3_4:17106720-17106739 | Msa0492910:CDS | 35.0% | |
| ATGCCAAAGTATGTATCCTT+TGG | - | chr3_4:17106726-17106745 | None:intergenic | 35.0% | |
| CCATAAGTCAGGAAATAGTT+TGG | - | chr3_4:17106774-17106793 | None:intergenic | 35.0% | |
| CCAAACTATTTCCTGACTTA+TGG | + | chr3_4:17106771-17106790 | Msa0492910:CDS | 35.0% | |
| ! | ATTTTCCGTTTCCATAAGTC+AGG | - | chr3_4:17106785-17106804 | None:intergenic | 35.0% |
| ! | CTCTTCCAATTTGATTTCAC+TGG | - | chr3_4:17106977-17106996 | None:intergenic | 35.0% |
| CAGTGAAATCAAATTGGAAG+AGG | + | chr3_4:17106975-17106994 | Msa0492910:intron | 35.0% | |
| TGTCAAAAGATGCTTCATGT+TGG | + | chr3_4:17107083-17107102 | Msa0492910:CDS | 35.0% | |
| TGAAAACTGAATTGCAGAGA+AGG | - | chr3_4:17107155-17107174 | None:intergenic | 35.0% | |
| ! | TCTGCAATTCAGTTTTCACT+TGG | + | chr3_4:17107157-17107176 | Msa0492910:intron | 35.0% |
| ! | GCTACCATTTCTCTATTTTC+TGG | + | chr3_4:17107329-17107348 | Msa0492910:intron | 35.0% |
| CACACCAGAAAATAGAGAAA+TGG | - | chr3_4:17107336-17107355 | None:intergenic | 35.0% | |
| ! | AAGTAGACCTTTTCGATTCT+AGG | + | chr3_4:17107606-17107625 | Msa0492910:intron | 35.0% |
| ATGAATGCCTAGAATCGAAA+AGG | - | chr3_4:17107616-17107635 | None:intergenic | 35.0% | |
| CTGAAGAAGAAATGTTGAAG+TGG | + | chr3_4:17107703-17107722 | Msa0492910:CDS | 35.0% | |
| AAGCAAAGATCACATGTTTC+AGG | - | chr3_4:17107802-17107821 | None:intergenic | 35.0% | |
| ! | TGATCTTTGCTTCTTGTTGT+AGG | + | chr3_4:17107810-17107829 | Msa0492910:intron | 35.0% |
| GTATAATGAGCATGTTGTGT+GGG | + | chr3_4:17107832-17107851 | Msa0492910:CDS | 35.0% | |
| TATAATGAGCATGTTGTGTG+GGG | + | chr3_4:17107833-17107852 | Msa0492910:CDS | 35.0% | |
| AGGTGAAGATTAAACTGTTG+AGG | + | chr3_4:17107864-17107883 | Msa0492910:CDS | 35.0% | |
| ! | GACAACTTTTACTCCATGAA+GGG | - | chr3_4:17108069-17108088 | None:intergenic | 35.0% |
| TCTCGATGAATTTGTCTTTC+AGG | + | chr3_4:17108213-17108232 | Msa0492910:intron | 35.0% | |
| ATACAAAGTTTGAGGGAATC+TGG | + | chr3_4:17108241-17108260 | Msa0492910:CDS | 35.0% | |
| !! | CTTTTCTTTGGAAAGTGATG+GGG | - | chr3_4:17108293-17108312 | None:intergenic | 35.0% |
| TTTATCTCTCCCATCTAGAA+AGG | + | chr3_4:17108360-17108379 | Msa0492910:CDS | 35.0% | |
| TTCTTCCAACCTTTCTAGAT+GGG | - | chr3_4:17108372-17108391 | None:intergenic | 35.0% | |
| TTACTATCTTCTACTACTCC+TGG | - | chr3_4:17108481-17108500 | None:intergenic | 35.0% | |
| CTGATCATGAATGTGAAATG+AGG | - | chr3_4:17108504-17108523 | None:intergenic | 35.0% | |
| GTATGAGTAAGAGGTGAAAG+AGG | - | chr3_4:17101567-17101586 | None:intergenic | 40.0% | |
| GAATGAGCAGTATGAGTAAG+AGG | - | chr3_4:17101576-17101595 | None:intergenic | 40.0% | |
| CTAGAGATTAATGTGCTGGA+TGG | + | chr3_4:17102104-17102123 | Msa0492910:intron | 40.0% | |
| ATTATCCCATTAAGTGGGGT+CGG | - | chr3_4:17102184-17102203 | None:intergenic | 40.0% | |
| ATTAACGATACACCGCAACT+AGG | - | chr3_4:17102318-17102337 | None:intergenic | 40.0% | |
| GTGATCTGCGTTTATGAATG+GGG | + | chr3_4:17102624-17102643 | Msa0492910:intron | 40.0% | |
| ! | TGCTACTCCTGAAGTATCAA+AGG | + | chr3_4:17103228-17103247 | Msa0492910:CDS | 40.0% |
| ! | TCCTGAAGTATCAAAGGTCT+TGG | + | chr3_4:17103234-17103253 | Msa0492910:CDS | 40.0% |
| TCCAAGACCTTTGATACTTC+AGG | - | chr3_4:17103238-17103257 | None:intergenic | 40.0% | |
| CTGAGTTTGTGTCTACTTAC+AGG | - | chr3_4:17103268-17103287 | None:intergenic | 40.0% | |
| TGGAAGAACAACAAGCTAAG+AGG | + | chr3_4:17103561-17103580 | Msa0492910:CDS | 40.0% | |
| TCAGTTGAAACGACAATCCA+AGG | + | chr3_4:17104022-17104041 | Msa0492910:intron | 40.0% | |
| CAGTTGAAACGACAATCCAA+GGG | + | chr3_4:17104023-17104042 | Msa0492910:intron | 40.0% | |
| !! | TAAGCATTGATAGTTGCCCT+TGG | - | chr3_4:17104042-17104061 | None:intergenic | 40.0% |
| CTACAATGCTCAACACCATA+AGG | + | chr3_4:17104164-17104183 | Msa0492910:intron | 40.0% | |
| ! | CAATGAGCATAGTAGCCTTA+TGG | - | chr3_4:17104182-17104201 | None:intergenic | 40.0% |
| CATACATGTATCCTGAAGAC+AGG | - | chr3_4:17104272-17104291 | None:intergenic | 40.0% | |
| ACCATGTCTCGTTCCAAATA+CGG | - | chr3_4:17104376-17104395 | None:intergenic | 40.0% | |
| ! | TATTTGGAACGAGACATGGT+TGG | + | chr3_4:17104376-17104395 | Msa0492910:CDS | 40.0% |
| TGTAAAGCAGTCCCTCAATA+TGG | + | chr3_4:17104436-17104455 | Msa0492910:CDS | 40.0% | |
| CAATAGCCATCTCCATATTG+AGG | - | chr3_4:17104451-17104470 | None:intergenic | 40.0% | |
| AGATGGCTATTGTTATGGCA+AGG | + | chr3_4:17104459-17104478 | Msa0492910:CDS | 40.0% | |
| GATGGCTATTGTTATGGCAA+GGG | + | chr3_4:17104460-17104479 | Msa0492910:CDS | 40.0% | |
| CTATTGTTATGGCAAGGGTA+TGG | + | chr3_4:17104465-17104484 | Msa0492910:intron | 40.0% | |
| GTAACATCAGGATTCTGGTA+TGG | + | chr3_4:17104576-17104595 | Msa0492910:intron | 40.0% | |
| TTGTGGAACTGGAAGAGAAA+TGG | + | chr3_4:17104771-17104790 | Msa0492910:intron | 40.0% | |
| AGCATACTTGGTTGAAGGAA+AGG | - | chr3_4:17105044-17105063 | None:intergenic | 40.0% | |
| ! | TGAAGGTTGAGTTGTTGTGA+TGG | + | chr3_4:17105329-17105348 | Msa0492910:intron | 40.0% |
| TGATGGCAAGCATTTCTTGT+TGG | + | chr3_4:17105346-17105365 | Msa0492910:intron | 40.0% | |
| GATGGCAAGCATTTCTTGTT+GGG | + | chr3_4:17105347-17105366 | Msa0492910:intron | 40.0% | |
| CTTTCTTAGCTGAGTAGGAT+AGG | + | chr3_4:17105397-17105416 | Msa0492910:intron | 40.0% | |
| GTATTACAGCCTACAAGACA+TGG | - | chr3_4:17105540-17105559 | None:intergenic | 40.0% | |
| GTTAGGTGAAGAGACAAGAA+GGG | - | chr3_4:17105812-17105831 | None:intergenic | 40.0% | |
| TGTTAGGTGAAGAGACAAGA+AGG | - | chr3_4:17105813-17105832 | None:intergenic | 40.0% | |
| ! | CACCTAACAGCCAAAGTTTT+TGG | + | chr3_4:17105824-17105843 | Msa0492910:intron | 40.0% |
| ACCCAAAAACTTTGGCTGTT+AGG | - | chr3_4:17105829-17105848 | None:intergenic | 40.0% | |
| TCCAAAGGTCTACTGCTTAA+TGG | + | chr3_4:17105987-17106006 | Msa0492910:intron | 40.0% | |
| CCAAAGGTCTACTGCTTAAT+GGG | + | chr3_4:17105988-17106007 | Msa0492910:intron | 40.0% | |
| ! | CTCTTTTCATGGCACACAAT+TGG | - | chr3_4:17106101-17106120 | None:intergenic | 40.0% |
| !! | TGTGCCATGAAAAGAGCATT+AGG | + | chr3_4:17106105-17106124 | Msa0492910:intron | 40.0% |
| TATCGATGGTCTTCGTTTCT+TGG | + | chr3_4:17106180-17106199 | Msa0492910:intron | 40.0% | |
| TTGGGGAGTTGAAAATCTCA+TGG | + | chr3_4:17106229-17106248 | Msa0492910:intron | 40.0% | |
| ! | AAAACTTTTCTCTGCCCCTT+TGG | + | chr3_4:17106489-17106508 | Msa0492910:intron | 40.0% |
| TTTCATATGACGAGCCAAAG+GGG | - | chr3_4:17106506-17106525 | None:intergenic | 40.0% | |
| !!! | TGTGTTTTGGCTGAATTAGG+AGG | + | chr3_4:17106581-17106600 | Msa0492910:intron | 40.0% |
| GAATTAGGAGGATATGTCTG+TGG | + | chr3_4:17106593-17106612 | Msa0492910:intron | 40.0% | |
| !!! | CTTTTTTGATCCGTCTAAGC+AGG | + | chr3_4:17106668-17106687 | Msa0492910:intron | 40.0% |
| AACATCGTTACCTGCTTAGA+CGG | - | chr3_4:17106681-17106700 | None:intergenic | 40.0% | |
| ATGTACAAAGATTCTGTGCG+CGG | + | chr3_4:17106744-17106763 | Msa0492910:CDS | 40.0% | |
| GAAACGGAAAATCAGTTGCA+CGG | + | chr3_4:17106793-17106812 | Msa0492910:CDS | 40.0% | |
| AAACGGAAAATCAGTTGCAC+GGG | + | chr3_4:17106794-17106813 | Msa0492910:CDS | 40.0% | |
| AACTGAATTGCAGAGAAGGT+AGG | - | chr3_4:17107151-17107170 | None:intergenic | 40.0% | |
| ! | TGGATTGGGTATCAGAAAAC+CGG | + | chr3_4:17107177-17107196 | Msa0492910:intron | 40.0% |
| GAAAACCGGATTTATTCAGC+CGG | + | chr3_4:17107191-17107210 | Msa0492910:intron | 40.0% | |
| AAAACCGGATTTATTCAGCC+GGG | + | chr3_4:17107192-17107211 | Msa0492910:intron | 40.0% | |
| AGTCAATGCTTGCGTAATGT+AGG | + | chr3_4:17107290-17107309 | Msa0492910:intron | 40.0% | |
| GTCAATGCTTGCGTAATGTA+GGG | + | chr3_4:17107291-17107310 | Msa0492910:intron | 40.0% | |
| ! | CTTATGAAGCACTTAGACAC+CGG | + | chr3_4:17107375-17107394 | Msa0492910:intron | 40.0% |
| CGACATTGATACGTAGACAT+CGG | + | chr3_4:17107401-17107420 | Msa0492910:intron | 40.0% | |
| ! | TCTGAAGTGACGTGTTACAT+AGG | + | chr3_4:17107524-17107543 | Msa0492910:intron | 40.0% |
| GGTATAATGAGCATGTTGTG+TGG | + | chr3_4:17107831-17107850 | Msa0492910:intron | 40.0% | |
| ! | GGACAACTTTTACTCCATGA+AGG | - | chr3_4:17108070-17108089 | None:intergenic | 40.0% |
| GTTTACAACGCTAAAGAGAG+TGG | + | chr3_4:17108138-17108157 | Msa0492910:intron | 40.0% | |
| TCTAGATGGGAGAGATAAAG+AGG | - | chr3_4:17108359-17108378 | None:intergenic | 40.0% | |
| GTTCTTCCAACCTTTCTAGA+TGG | - | chr3_4:17108373-17108392 | None:intergenic | 40.0% | |
| TGCAGTTGCTTGAGATTCTT+TGG | - | chr3_4:17108395-17108414 | None:intergenic | 40.0% | |
| AAGAATCTCAAGCAACTGCA+AGG | + | chr3_4:17108395-17108414 | Msa0492910:CDS | 40.0% | |
| AAGGAGAAGAAGAACGACCA+AGG | - | chr3_4:17101614-17101633 | None:intergenic | 45.0% | |
| TGGTGACTCACTTACTCCAA+AGG | + | chr3_4:17101668-17101687 | Msa0492910:CDS | 45.0% | |
| ! | GTATATGGGATGGGTTTAGG+TGG | + | chr3_4:17101955-17101974 | Msa0492910:intron | 45.0% |
| GTTTAGGTGGTTTGAGCATG+TGG | + | chr3_4:17101968-17101987 | Msa0492910:intron | 45.0% | |
| AGTAAGGAGAGTAGACCAGA+TGG | + | chr3_4:17102013-17102032 | Msa0492910:intron | 45.0% | |
| TGACTACTCTACTCTCCATC+TGG | - | chr3_4:17102031-17102050 | None:intergenic | 45.0% | |
| TCACAAGTAGTACATCCGCA+GGG | + | chr3_4:17103125-17103144 | Msa0492910:CDS | 45.0% | |
| ! | TTTTCTCTTTGTGGAGGGGA+AGG | + | chr3_4:17103204-17103223 | Msa0492910:CDS | 45.0% |
| GACACAAACTCAGCATGCAT+TGG | + | chr3_4:17103275-17103294 | Msa0492910:intron | 45.0% | |
| TAATACCCTGCTGCAAAAGC+TGG | + | chr3_4:17103915-17103934 | Msa0492910:intron | 45.0% | |
| TCTTGCATTCTCCTGTCTTC+AGG | + | chr3_4:17104258-17104277 | Msa0492910:intron | 45.0% | |
| TTGGTTGCATCAGCCGTATT+TGG | + | chr3_4:17104360-17104379 | Msa0492910:intron | 45.0% | |
| ATCAGGATTCTGGTATGGAC+TGG | + | chr3_4:17104581-17104600 | Msa0492910:intron | 45.0% | |
| GATGAATTAATACACCCGGC+TGG | + | chr3_4:17104622-17104641 | Msa0492910:CDS | 45.0% | |
| CAGTTGCTTCTTGATGTTCC+AGG | + | chr3_4:17104667-17104686 | Msa0492910:CDS | 45.0% | |
| ATGACATGAACTGGTGCATC+AGG | + | chr3_4:17105283-17105302 | Msa0492910:intron | 45.0% | |
| ! | TGCATCAGGTCACTTTAGAG+TGG | + | chr3_4:17105297-17105316 | Msa0492910:intron | 45.0% |
| ACTCTCACACTTGTGAAGGA+AGG | - | chr3_4:17105595-17105614 | None:intergenic | 45.0% | |
| TCCTTCACAAGTGTGAGAGT+AGG | + | chr3_4:17105595-17105614 | Msa0492910:intron | 45.0% | |
| ACCTACTCTCACACTTGTGA+AGG | - | chr3_4:17105599-17105618 | None:intergenic | 45.0% | |
| GCACATTGCAAACGTAAACC+TGG | + | chr3_4:17105721-17105740 | Msa0492910:intron | 45.0% | |
| ! | TAATGTTGTGCTAGCCTCCA+AGG | - | chr3_4:17105755-17105774 | None:intergenic | 45.0% |
| CCCATTAAGCAGTAGACCTT+TGG | - | chr3_4:17105991-17106010 | None:intergenic | 45.0% | |
| AAACCGGATTTATTCAGCCG+GGG | + | chr3_4:17107193-17107212 | Msa0492910:intron | 45.0% | |
| AAATGGTAGCTCAGTACACG+AGG | - | chr3_4:17107319-17107338 | None:intergenic | 45.0% | |
| CTACGTATCAATGTCGTGTC+CGG | - | chr3_4:17107397-17107416 | None:intergenic | 45.0% | |
| ! | CACATGTGTTGGTGTCTTGT+CGG | + | chr3_4:17107458-17107477 | Msa0492910:intron | 45.0% |
| CATCGACACATGTCAGACAT+TGG | + | chr3_4:17107488-17107507 | Msa0492910:intron | 45.0% | |
| TGTTGTGTGGGGTGATAAAG+AGG | + | chr3_4:17107844-17107863 | Msa0492910:CDS | 45.0% | |
| GTTTACAATGGGAGTGACCT+TGG | - | chr3_4:17107960-17107979 | None:intergenic | 45.0% | |
| CACGATACTAACACCCTTCA+TGG | + | chr3_4:17108053-17108072 | Msa0492910:intron | 45.0% | |
| AAGTTGAGTCGTTGGGAGTT+GGG | - | chr3_4:17108091-17108110 | None:intergenic | 45.0% | |
| TCTCTCCCATCTAGAAAGGT+TGG | + | chr3_4:17108364-17108383 | Msa0492910:CDS | 45.0% | |
| ATCTCAAGCAACTGCAAGGA+AGG | + | chr3_4:17108399-17108418 | Msa0492910:CDS | 45.0% | |
| ! | AGCAACTGCAAGGAAGGTTT+TGG | + | chr3_4:17108405-17108424 | Msa0492910:CDS | 45.0% |
| CTATCTTCTACTACTCCTGG+TGG | - | chr3_4:17108478-17108497 | None:intergenic | 45.0% | |
| !! | ATTGGCATGGTGGTGGTTGA+TGG | - | chr3_4:17101330-17101349 | None:intergenic | 50.0% |
| !! | TGGTTGTGGTGGTTGGTGAT+TGG | - | chr3_4:17101348-17101367 | None:intergenic | 50.0% |
| CTATAGTAGCGAGCGAGACA+GGG | - | chr3_4:17101452-17101471 | None:intergenic | 50.0% | |
| GCTTTCATCCTTCAATGGCG+TGG | + | chr3_4:17101471-17101490 | Msa0492910:CDS | 50.0% | |
| TTCATCCTTCAATGGCGTGG+TGG | + | chr3_4:17101474-17101493 | Msa0492910:CDS | 50.0% | |
| TGATACCACCACGCCATTGA+AGG | - | chr3_4:17101482-17101501 | None:intergenic | 50.0% | |
| GAAGTTATGAGCGCCATGAG+GGG | - | chr3_4:17101526-17101545 | None:intergenic | 50.0% | |
| GGAAGTTATGAGCGCCATGA+GGG | - | chr3_4:17101527-17101546 | None:intergenic | 50.0% | |
| GAGGAGAAGAATCCATGCCA+GGG | - | chr3_4:17101548-17101567 | None:intergenic | 50.0% | |
| AGAGGAGAAGAATCCATGCC+AGG | - | chr3_4:17101549-17101568 | None:intergenic | 50.0% | |
| ATTAAGTGGGGTCGGCTACA+TGG | - | chr3_4:17102176-17102195 | None:intergenic | 50.0% | |
| ATGTAGCCGACCCCACTTAA+TGG | + | chr3_4:17102175-17102194 | Msa0492910:intron | 50.0% | |
| TGTAGCCGACCCCACTTAAT+GGG | + | chr3_4:17102176-17102195 | Msa0492910:intron | 50.0% | |
| AAGATTTAGTCCTGGGCTCC+TGG | + | chr3_4:17102795-17102814 | Msa0492910:intron | 50.0% | |
| AGTCAAAGCTCAACTCAGCC+AGG | - | chr3_4:17102816-17102835 | None:intergenic | 50.0% | |
| GTCACAAGTAGTACATCCGC+AGG | + | chr3_4:17103124-17103143 | Msa0492910:CDS | 50.0% | |
| AAGAATCTGCTCAAGCCCTG+CGG | - | chr3_4:17103143-17103162 | None:intergenic | 50.0% | |
| !! | GGATGTAGGTACCGAACGTA+AGG | - | chr3_4:17103838-17103857 | None:intergenic | 50.0% |
| ! | ACCTTCCAGCTTTTGCAGCA+GGG | - | chr3_4:17103923-17103942 | None:intergenic | 50.0% |
| TGTTCACAGCACTTCCAGCT+TGG | + | chr3_4:17103942-17103961 | Msa0492910:intron | 50.0% | |
| GTTCACAGCACTTCCAGCTT+GGG | + | chr3_4:17103943-17103962 | Msa0492910:intron | 50.0% | |
| TTCTGTTGCTCATCCCAAGC+TGG | - | chr3_4:17103959-17103978 | None:intergenic | 50.0% | |
| ! | GCCGTATTTGGAACGAGACA+TGG | + | chr3_4:17104372-17104391 | Msa0492910:intron | 50.0% |
| GCAGTCCCTCAATATGGAGA+TGG | + | chr3_4:17104442-17104461 | Msa0492910:CDS | 50.0% | |
| !! | GTGCTCGGGAGTACTCTTTA+AGG | + | chr3_4:17104644-17104663 | Msa0492910:CDS | 50.0% |
| TGCAAACGTAAACCTGGTGC+TGG | + | chr3_4:17105727-17105746 | Msa0492910:intron | 50.0% | |
| GGAGGATATGTCTGTGGTTC+TGG | + | chr3_4:17106599-17106618 | Msa0492910:intron | 50.0% | |
| CACGGGTACAAGATCACCTT+CGG | + | chr3_4:17106811-17106830 | Msa0492910:CDS | 50.0% | |
| CAAGATCACCTTCGGCCTAA+TGG | + | chr3_4:17106819-17106838 | Msa0492910:CDS | 50.0% | |
| TGCCATCTGTGTGCACCATT+AGG | - | chr3_4:17106837-17106856 | None:intergenic | 50.0% | |
| ACTTCTAGACGTGATCGCTG+TGG | + | chr3_4:17107039-17107058 | Msa0492910:CDS | 50.0% | |
| AACCGGATTTATTCAGCCGG+GGG | + | chr3_4:17107194-17107213 | Msa0492910:intron | 50.0% | |
| TACCCCCGGCTGAATAAATC+CGG | - | chr3_4:17107199-17107218 | None:intergenic | 50.0% | |
| GACTCGCATATACACTCCCA+TGG | + | chr3_4:17107898-17107917 | Msa0492910:CDS | 50.0% | |
| ! | CAAGTTGAGTCGTTGGGAGT+TGG | - | chr3_4:17108092-17108111 | None:intergenic | 50.0% |
| ! | CTCCAGCAAGTTGAGTCGTT+GGG | - | chr3_4:17108098-17108117 | None:intergenic | 50.0% |
| ! | ACTCCAGCAAGTTGAGTCGT+TGG | - | chr3_4:17108099-17108118 | None:intergenic | 50.0% |
| !! | GTTGGTGATTGGCATGGTGG+TGG | - | chr3_4:17101337-17101356 | None:intergenic | 55.0% |
| !! | GTGGTTGGTGATTGGCATGG+TGG | - | chr3_4:17101340-17101359 | None:intergenic | 55.0% |
| !! | GTGGTGGTTGGTGATTGGCA+TGG | - | chr3_4:17101343-17101362 | None:intergenic | 55.0% |
| CTTGGAGGTGAAGGAGGAAG+TGG | - | chr3_4:17101406-17101425 | None:intergenic | 55.0% | |
| GAGGATCTTGGAGGTGAAGG+AGG | - | chr3_4:17101412-17101431 | None:intergenic | 55.0% | |
| GAGGAGGATCTTGGAGGTGA+AGG | - | chr3_4:17101415-17101434 | None:intergenic | 55.0% | |
| AGTGAGGAGGAGGAGGATCT+TGG | - | chr3_4:17101424-17101443 | None:intergenic | 55.0% | |
| GCTATAGTAGCGAGCGAGAC+AGG | - | chr3_4:17101453-17101472 | None:intergenic | 55.0% | |
| GGACAAAAGGGTCGCTGGAT+CGG | - | chr3_4:17101505-17101524 | None:intergenic | 55.0% | |
| AGCGCCATGAGGGGACAAAA+GGG | - | chr3_4:17101517-17101536 | None:intergenic | 55.0% | |
| GGGAAGTTATGAGCGCCATG+AGG | - | chr3_4:17101528-17101547 | None:intergenic | 55.0% | |
| CATGGCGCTCATAACTTCCC+TGG | + | chr3_4:17101528-17101547 | Msa0492910:CDS | 55.0% | |
| CGCTCATAACTTCCCTGGCA+TGG | + | chr3_4:17101533-17101552 | Msa0492910:CDS | 55.0% | |
| GGCTTGAGCAGATTCTTCCC+TGG | + | chr3_4:17103146-17103165 | Msa0492910:CDS | 55.0% | |
| ACCCTGCTGCAAAAGCTGGA+AGG | + | chr3_4:17103919-17103938 | Msa0492910:intron | 55.0% | |
| ! | CACCTTCCAGCTTTTGCAGC+AGG | - | chr3_4:17103924-17103943 | None:intergenic | 55.0% |
| TAATACACCCGGCTGGTGCT+CGG | + | chr3_4:17104629-17104648 | Msa0492910:CDS | 55.0% | |
| ! | TAAACCTGGTGCTGGAGCCT+TGG | + | chr3_4:17105735-17105754 | Msa0492910:intron | 55.0% |
| TGTGTGCACCATTAGGCCGA+AGG | - | chr3_4:17106830-17106849 | None:intergenic | 55.0% | |
| GGCCTAATGGTGCACACAGA+TGG | + | chr3_4:17106832-17106851 | Msa0492910:CDS | 55.0% | |
| CTCCCAACGACTCAACTTGC+TGG | + | chr3_4:17108093-17108112 | Msa0492910:intron | 55.0% | |
| ACTACTCCTGGTGGAGACTG+CGG | - | chr3_4:17108469-17108488 | None:intergenic | 55.0% | |
| GTGGAGGTGGTTGTGGTGGT+TGG | - | chr3_4:17101355-17101374 | None:intergenic | 60.0% | |
| !! | TGGAGGTGGGTTGACGGAGA+GGG | - | chr3_4:17101380-17101399 | None:intergenic | 60.0% |
| !! | TGGTGGTGGAGGTGGGTTGA+CGG | - | chr3_4:17101386-17101405 | None:intergenic | 60.0% |
| !! | GAGGAAGTGGTGGTGGAGGT+GGG | - | chr3_4:17101393-17101412 | None:intergenic | 60.0% |
| !! | GAAGGAGGAAGTGGTGGTGG+AGG | - | chr3_4:17101397-17101416 | None:intergenic | 60.0% |
| GGTGAAGGAGGAAGTGGTGG+TGG | - | chr3_4:17101400-17101419 | None:intergenic | 60.0% | |
| GGAGGTGAAGGAGGAAGTGG+TGG | - | chr3_4:17101403-17101422 | None:intergenic | 60.0% | |
| GAGGAGGAGGAGGATCTTGG+AGG | - | chr3_4:17101421-17101440 | None:intergenic | 60.0% | |
| AGACAGGGAGGAGAGTGAGG+AGG | - | chr3_4:17101437-17101456 | None:intergenic | 60.0% | |
| TAGTAGCGAGCGAGACAGGG+AGG | - | chr3_4:17101449-17101468 | None:intergenic | 60.0% | |
| TGAGGGGACAAAAGGGTCGC+TGG | - | chr3_4:17101510-17101529 | None:intergenic | 60.0% | |
| ! | GCGACCCTTTTGTCCCCTCA+TGG | + | chr3_4:17101510-17101529 | Msa0492910:CDS | 60.0% |
| GAGCGCCATGAGGGGACAAA+AGG | - | chr3_4:17101518-17101537 | None:intergenic | 60.0% | |
| AATACACCCGGCTGGTGCTC+GGG | + | chr3_4:17104630-17104649 | Msa0492910:CDS | 60.0% | |
| GGGTGTGGAGGTGGTTGTGG+TGG | - | chr3_4:17101359-17101378 | None:intergenic | 65.0% | |
| ! | GAGGGGTGTGGAGGTGGTTG+TGG | - | chr3_4:17101362-17101381 | None:intergenic | 65.0% |
| ! | GTTGACGGAGAGGGGTGTGG+AGG | - | chr3_4:17101371-17101390 | None:intergenic | 65.0% |
| ! | TGGGTTGACGGAGAGGGGTG+TGG | - | chr3_4:17101374-17101393 | None:intergenic | 65.0% |
| !! | GGAGGTGGGTTGACGGAGAG+GGG | - | chr3_4:17101379-17101398 | None:intergenic | 65.0% |
| !! | GTGGAGGTGGGTTGACGGAG+AGG | - | chr3_4:17101381-17101400 | None:intergenic | 65.0% |
| !! | GGAGGAAGTGGTGGTGGAGG+TGG | - | chr3_4:17101394-17101413 | None:intergenic | 65.0% |
| GGAGGAGAGTGAGGAGGAGG+AGG | - | chr3_4:17101431-17101450 | None:intergenic | 65.0% | |
| CAGGGAGGAGAGTGAGGAGG+AGG | - | chr3_4:17101434-17101453 | None:intergenic | 65.0% | |
| GCGAGACAGGGAGGAGAGTG+AGG | - | chr3_4:17101440-17101459 | None:intergenic | 65.0% | |
| CTCAACTCAGCCAGGAGCCC+AGG | - | chr3_4:17102808-17102827 | None:intergenic | 65.0% | |
| AGTACTCCCGAGCACCAGCC+GGG | - | chr3_4:17104639-17104658 | None:intergenic | 65.0% | |
| GAGTACTCCCGAGCACCAGC+CGG | - | chr3_4:17104640-17104659 | None:intergenic | 65.0% | |
| ! | ACCTGGTGCTGGAGCCTTGG+AGG | + | chr3_4:17105738-17105757 | Msa0492910:intron | 65.0% |
| TGGTGGAGACTGCGGCGGTA+CGG | - | chr3_4:17108461-17108480 | None:intergenic | 65.0% | |
| ACTCCTGGTGGAGACTGCGG+CGG | - | chr3_4:17108466-17108485 | None:intergenic | 65.0% | |
| ! | GACGGAGAGGGGTGTGGAGG+TGG | - | chr3_4:17101368-17101387 | None:intergenic | 70.0% |
| GCCTCCAAGGCTCCAGCACC+AGG | - | chr3_4:17105742-17105761 | None:intergenic | 70.0% | |
| GTACCGCCGCAGTCTCCACC+AGG | + | chr3_4:17108460-17108479 | Msa0492910:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 17101208 | 17108745 | 17101208 | ID=Msa0492910;Name=Msa0492910 |
| chr3_4 | mRNA | 17101208 | 17108745 | 17101208 | ID=Msa0492910-mRNA-1;Parent=Msa0492910;Name=Msa0492910-mRNA-1;_AED=0.14;_eAED=0.14;_QI=134|0.9|0.90|1|1|1|11|226|523 |
| chr3_4 | exon | 17101208 | 17101689 | 17101208 | ID=Msa0492910-mRNA-1:exon:4835;Parent=Msa0492910-mRNA-1 |
| chr3_4 | exon | 17103118 | 17103267 | 17103118 | ID=Msa0492910-mRNA-1:exon:4836;Parent=Msa0492910-mRNA-1 |
| chr3_4 | exon | 17103530 | 17103582 | 17103530 | ID=Msa0492910-mRNA-1:exon:4837;Parent=Msa0492910-mRNA-1 |
| chr3_4 | exon | 17104373 | 17104481 | 17104373 | ID=Msa0492910-mRNA-1:exon:4838;Parent=Msa0492910-mRNA-1 |
| chr3_4 | exon | 17104586 | 17104702 | 17104586 | ID=Msa0492910-mRNA-1:exon:4839;Parent=Msa0492910-mRNA-1 |
| chr3_4 | exon | 17104847 | 17104891 | 17104847 | ID=Msa0492910-mRNA-1:exon:4840;Parent=Msa0492910-mRNA-1 |
| chr3_4 | exon | 17106690 | 17106877 | 17106690 | ID=Msa0492910-mRNA-1:exon:4841;Parent=Msa0492910-mRNA-1 |
| chr3_4 | exon | 17106978 | 17107119 | 17106978 | ID=Msa0492910-mRNA-1:exon:4842;Parent=Msa0492910-mRNA-1 |
| chr3_4 | exon | 17107678 | 17107724 | 17107678 | ID=Msa0492910-mRNA-1:exon:4843;Parent=Msa0492910-mRNA-1 |
| chr3_4 | exon | 17107832 | 17107919 | 17107832 | ID=Msa0492910-mRNA-1:exon:4844;Parent=Msa0492910-mRNA-1 |
| chr3_4 | exon | 17108235 | 17108745 | 17108235 | ID=Msa0492910-mRNA-1:exon:4845;Parent=Msa0492910-mRNA-1 |
| chr3_4 | five_prime_UTR | 17101208 | 17101341 | 17101208 | ID=Msa0492910-mRNA-1:five_prime_utr;Parent=Msa0492910-mRNA-1 |
| chr3_4 | CDS | 17101342 | 17101689 | 17101342 | ID=Msa0492910-mRNA-1:cds;Parent=Msa0492910-mRNA-1 |
| chr3_4 | CDS | 17103118 | 17103267 | 17103118 | ID=Msa0492910-mRNA-1:cds;Parent=Msa0492910-mRNA-1 |
| chr3_4 | CDS | 17103530 | 17103582 | 17103530 | ID=Msa0492910-mRNA-1:cds;Parent=Msa0492910-mRNA-1 |
| chr3_4 | CDS | 17104373 | 17104481 | 17104373 | ID=Msa0492910-mRNA-1:cds;Parent=Msa0492910-mRNA-1 |
| chr3_4 | CDS | 17104586 | 17104702 | 17104586 | ID=Msa0492910-mRNA-1:cds;Parent=Msa0492910-mRNA-1 |
| chr3_4 | CDS | 17104847 | 17104891 | 17104847 | ID=Msa0492910-mRNA-1:cds;Parent=Msa0492910-mRNA-1 |
| chr3_4 | CDS | 17106690 | 17106877 | 17106690 | ID=Msa0492910-mRNA-1:cds;Parent=Msa0492910-mRNA-1 |
| chr3_4 | CDS | 17106978 | 17107119 | 17106978 | ID=Msa0492910-mRNA-1:cds;Parent=Msa0492910-mRNA-1 |
| chr3_4 | CDS | 17107678 | 17107724 | 17107678 | ID=Msa0492910-mRNA-1:cds;Parent=Msa0492910-mRNA-1 |
| chr3_4 | CDS | 17107832 | 17107919 | 17107832 | ID=Msa0492910-mRNA-1:cds;Parent=Msa0492910-mRNA-1 |
| chr3_4 | CDS | 17108235 | 17108519 | 17108235 | ID=Msa0492910-mRNA-1:cds;Parent=Msa0492910-mRNA-1 |
| chr3_4 | three_prime_UTR | 17108520 | 17108745 | 17108520 | ID=Msa0492910-mRNA-1:three_prime_utr;Parent=Msa0492910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
