AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0493280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 75 sgRNAs with CRISPR-Local

Find 313 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGCTTGAAGCTTGGGTTTA+TGG 0.115923 3_4:-17873956 Msa0493280:CDS
GGGCGCCTGGCGCCAGGGTT+AGG 0.204484 3_4:+17874132 None:intergenic
GAAATAATTAAACTGAATTT+AGG 0.221259 3_4:+17869699 None:intergenic
CAAATCTTAGAATTTATAAA+TGG 0.247196 3_4:-17873976 Msa0493280:intron
GCTGAAGATGGTGGTGAAAA+AGG 0.264410 3_4:-17869747 Msa0493280:CDS
CAGAGAACATTGCCATATAA+TGG 0.292808 3_4:+17869534 None:intergenic
TGTCTGGGGCGCCTGGCGCC+AGG 0.325711 3_4:+17874126 None:intergenic
GGCGCCTGGCGCCAGGGTTA+GGG 0.327917 3_4:+17874133 None:intergenic
AACGCGAACGTTGTCATGTC+TGG 0.328072 3_4:+17874110 None:intergenic
GGCGCCTAGCGCCCTTGTAC+AGG 0.331738 3_4:+17874166 None:intergenic
ATATGGCAATGTTCTCTGTT+TGG 0.333460 3_4:-17869529 Msa0493280:three_prime_UTR
TTCTCTTCTTACCTTGCTAT+AGG 0.341956 3_4:+17873113 None:intergenic
CCTTATTTGTTCAGGTTCTC+AGG 0.342509 3_4:-17872928 Msa0493280:intron
TTATAAATGGCTTGAAGCTT+GGG 0.357848 3_4:-17873963 Msa0493280:CDS
GGGTTTCCACTAGGTGAAAC+GGG 0.367299 3_4:-17873627 Msa0493280:CDS
CTGTTCTGCATGTTTCTCCT+AGG 0.368623 3_4:-17869563 Msa0493280:three_prime_UTR
CCTAGGGTAGCCCCATTATA+TGG 0.370000 3_4:-17869546 Msa0493280:three_prime_UTR
AGAGAACATTGCCATATAAT+GGG 0.371063 3_4:+17869535 None:intergenic
TGTTTGTTCGTTTCAATAGA+AGG 0.374282 3_4:-17869823 Msa0493280:CDS
TCAATAGAAGGGTTATTTGC+TGG 0.381959 3_4:-17869811 Msa0493280:CDS
GTTGTCATGTCTGGGGCGCC+TGG 0.382369 3_4:+17874119 None:intergenic
CGGAGCGTTGCGCCTGTACA+AGG 0.383813 3_4:-17874178 Msa0493280:CDS
TTTATAAATGGCTTGAAGCT+TGG 0.395187 3_4:-17873964 Msa0493280:CDS
CCAGGGTTAGGGCGCCTATG+TGG 0.412400 3_4:+17874144 None:intergenic
GTCTGGGGCGCCTGGCGCCA+GGG 0.430697 3_4:+17874127 None:intergenic
CAGGGTTAGGGCGCCTATGT+GGG 0.432668 3_4:+17874145 None:intergenic
GGCGCCCTAACCCTGGCGCC+AGG 0.434203 3_4:-17874137 Msa0493280:CDS
CCACACTAGGTTGGTTTCAA+GGG 0.437416 3_4:-17873648 Msa0493280:intron
CTAGGAGAAACATGCAGAAC+AGG 0.441085 3_4:+17869564 None:intergenic
TCCACACTAGGTTGGTTTCA+AGG 0.441541 3_4:-17873649 Msa0493280:intron
GGGGTTTCCACTAGGTGAAA+CGG 0.454535 3_4:-17873628 Msa0493280:CDS
TCTCAGGTTTCCCGTGGAAA+AGG 0.460562 3_4:-17872912 Msa0493280:CDS
GTCTGGAGCTTCGCTGAAGA+TGG 0.461440 3_4:-17869759 Msa0493280:CDS
TTCAGTTTAATTATTTCTTG+TGG 0.462276 3_4:-17869693 Msa0493280:exon
AAGGAACCCGCACGCCACTA+AGG 0.465084 3_4:-17873595 Msa0493280:CDS
CCACATAGGCGCCCTAACCC+TGG 0.474321 3_4:-17874144 Msa0493280:CDS
AACCAACGGAACTCCCTTAG+TGG 0.482686 3_4:+17873581 None:intergenic
GGTTTCAAGGGGTTTCCACT+AGG 0.492141 3_4:-17873636 Msa0493280:CDS
TGTTCTGCATGTTTCTCCTA+GGG 0.492739 3_4:-17869562 Msa0493280:three_prime_UTR
TATACGTGTCATGGCGGTCA+AGG 0.509640 3_4:+17873145 None:intergenic
ACGCGAACGTTGTCATGTCT+GGG 0.511824 3_4:+17874111 None:intergenic
TAGAAGGGTTATTTGCTGGC+TGG 0.518796 3_4:-17869807 Msa0493280:CDS
GTTTGTTCGTTTCAATAGAA+GGG 0.519286 3_4:-17869822 Msa0493280:CDS
CCATATAATGGGGCTACCCT+AGG 0.526950 3_4:+17869546 None:intergenic
TGCGCCTGTACAAGGGCGCT+AGG 0.527685 3_4:-17874170 Msa0493280:CDS
ATACGTGTCATGGCGGTCAA+GGG 0.531036 3_4:+17873146 None:intergenic
CGCCACTAAGGGAGTTCCGT+TGG 0.538913 3_4:-17873583 Msa0493280:intron
AGGGCGCTAGGCGCCCACAT+AGG 0.544132 3_4:-17874158 Msa0493280:CDS
AGTGGCGTGCGGGTTCCTTA+CGG 0.553571 3_4:+17873599 None:intergenic
GGAGCGTTGCGCCTGTACAA+GGG 0.553799 3_4:-17874177 Msa0493280:CDS
CAACTAGTCCAACACCAAGT+TGG 0.560415 3_4:+17872851 None:intergenic
GTGAAACGGGGTTAGCCGTA+AGG 0.561846 3_4:-17873614 Msa0493280:CDS
GGGTAATAGTTCTAGTGCTG+TGG 0.567428 3_4:-17869726 Msa0493280:CDS
GAACTCCCTTAGTGGCGTGC+GGG 0.568398 3_4:+17873589 None:intergenic
CTTCACTTCTATACGTGTCA+TGG 0.571021 3_4:+17873136 None:intergenic
ACACGCGAAAACACAAGTTA+CGG 0.576073 3_4:-17874198 Msa0493280:CDS
CACACTAGGTTGGTTTCAAG+GGG 0.578743 3_4:-17873647 Msa0493280:intron
AGGAACCCGCACGCCACTAA+GGG 0.582606 3_4:-17873594 Msa0493280:CDS
TTGTGGAGTAAAACTAGATG+AGG 0.588910 3_4:-17869676 Msa0493280:three_prime_UTR
GCTAACCCCGTTTCACCTAG+TGG 0.600522 3_4:+17873621 None:intergenic
TACGTGTCATGGCGGTCAAG+GGG 0.600705 3_4:+17873147 None:intergenic
TTGGATTGATCGTGCTTACG+AGG 0.601346 3_4:-17872876 Msa0493280:CDS
GGAACTCCCTTAGTGGCGTG+CGG 0.603336 3_4:+17873588 None:intergenic
TCGAAAATGGCGAAAACCTG+CGG 0.607843 3_4:-17874225 None:intergenic
TCAGGTTCTCAGGTTTCCCG+TGG 0.611525 3_4:-17872918 Msa0493280:intron
GTGCTTACGAGGAACCAACT+TGG 0.612184 3_4:-17872865 Msa0493280:intron
TGGAGCTTCGCTGAAGATGG+TGG 0.613285 3_4:-17869756 Msa0493280:CDS
ATCAAAGATACGTTGTCATG+AGG 0.615399 3_4:+17869474 None:intergenic
TCTATTGAAACGAACAAACA+CGG 0.619207 3_4:+17869826 None:intergenic
TAGAAGTGAAGCCTATAGCA+AGG 0.627190 3_4:-17873124 Msa0493280:intron
CGCGAACGTTGTCATGTCTG+GGG 0.640185 3_4:+17874112 None:intergenic
GAGAACATTGCCATATAATG+GGG 0.649516 3_4:+17869536 None:intergenic
CACTTCTATACGTGTCATGG+CGG 0.691136 3_4:+17873139 None:intergenic
GGTTTCCACTAGGTGAAACG+GGG 0.695264 3_4:-17873626 Msa0493280:CDS
AAAATGGCGAAAACCTGCGG+CGG 0.724609 3_4:-17874222 Msa0493280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAACAAAATTTATACTTTT+AGG + chr3_4:17871341-17871360 None:intergenic 10.0%
!!! AAAAGTATAAATTTTGTTTT+AGG - chr3_4:17871341-17871360 Msa0493280:intron 10.0%
!! TGTAAAAACAATTATAAAAA+AGG + chr3_4:17871960-17871979 None:intergenic 10.0%
!!! TTTTTATAATTGTTTTTACA+AGG - chr3_4:17871960-17871979 Msa0493280:intron 10.0%
!! TTTAAGAAAAAATAATACTT+TGG + chr3_4:17872258-17872277 None:intergenic 10.0%
!!! AATTATTATTTGAATCATTT+TGG - chr3_4:17872919-17872938 Msa0493280:intron 10.0%
!! CAAATCTTAGAATTTATAAA+TGG - chr3_4:17869663-17869682 Msa0493280:three_prime_UTR 15.0%
!! TTAACATCTTATTAATTTCT+TGG - chr3_4:17872803-17872822 Msa0493280:intron 15.0%
!!! TATATTTCAGTTTTCAATTA+CGG - chr3_4:17872864-17872883 Msa0493280:intron 15.0%
!! GAAATAATTAAACTGAATTT+AGG + chr3_4:17873943-17873962 None:intergenic 15.0%
!! ATAAAGAAATGTAATCATGT+AGG + chr3_4:17871559-17871578 None:intergenic 20.0%
!! AGTCATATTATTTAAAGAAG+TGG + chr3_4:17871739-17871758 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr3_4:17872194-17872213 None:intergenic 20.0%
!! GTAACATAGTATTAATTGAA+GGG + chr3_4:17872228-17872247 None:intergenic 20.0%
!! TGTAACATAGTATTAATTGA+AGG + chr3_4:17872229-17872248 None:intergenic 20.0%
!! AAATTATCCTAATCAACTAT+TGG + chr3_4:17872292-17872311 None:intergenic 20.0%
!! AATAGTTGATTAGGATAATT+TGG - chr3_4:17872291-17872310 Msa0493280:intron 20.0%
!!! AATTTTTTTTAGTGAGGATA+AGG - chr3_4:17872466-17872485 Msa0493280:intron 20.0%
!!! ATATGTTTGAGTATTTTTCA+AGG - chr3_4:17872639-17872658 Msa0493280:intron 20.0%
!!! TATATGTTTTGACATTATAC+TGG - chr3_4:17872942-17872961 Msa0493280:intron 20.0%
!! ATAAAAATAGAGACATTACA+AGG + chr3_4:17873724-17873743 None:intergenic 20.0%
!!! TTCAGTTTAATTATTTCTTG+TGG - chr3_4:17873946-17873965 Msa0493280:intron 20.0%
!!! TCTTATCTATATTTTAATGC+TGG - chr3_4:17874210-17874229 Msa0493280:CDS 20.0%
!!! GTTTTCACTTATTTTTCTAC+CGG - chr3_4:17869623-17869642 Msa0493280:three_prime_UTR 25.0%
! AAGAATGTTTAACAACATGT+AGG - chr3_4:17869950-17869969 Msa0493280:intron 25.0%
! AAAAGGTAAAGAAAAAGCTT+TGG - chr3_4:17870744-17870763 Msa0493280:intron 25.0%
! CTAAATGTAACATAAGACTT+TGG - chr3_4:17870881-17870900 Msa0493280:intron 25.0%
!! ACAATTTAAAACTGGTTCTT+TGG + chr3_4:17871118-17871137 None:intergenic 25.0%
!! TTGAAGGAACAATTTAAAAC+TGG + chr3_4:17871126-17871145 None:intergenic 25.0%
!! TTTTAAATTGTTCCTTCAAC+TGG - chr3_4:17871127-17871146 Msa0493280:intron 25.0%
! ATGACAAATGTAAAATGTTG+AGG + chr3_4:17871255-17871274 None:intergenic 25.0%
! TGTTTGTTCTTAATTGTTGT+TGG - chr3_4:17871279-17871298 Msa0493280:intron 25.0%
!!! TAAATTTTGTTTTAGGAGTG+TGG - chr3_4:17871348-17871367 Msa0493280:intron 25.0%
!! GTATAATTCTACATTTGTTG+TGG - chr3_4:17871458-17871477 Msa0493280:intron 25.0%
! ATAGAAGTAAACAGAAAACA+AGG + chr3_4:17871534-17871553 None:intergenic 25.0%
!! CAAACTATTTAAAACTCACA+TGG + chr3_4:17871666-17871685 None:intergenic 25.0%
! AAACCAATAGTTATTCATCA+GGG - chr3_4:17871766-17871785 Msa0493280:intron 25.0%
!!! TAGAAACAAGCATTGATAAA+AGG + chr3_4:17872007-17872026 None:intergenic 25.0%
!! AATTCAAGTTAACCAACAAA+TGG + chr3_4:17872054-17872073 None:intergenic 25.0%
!!! TTTCATATGATGCTAGTTTT+TGG - chr3_4:17872076-17872095 Msa0493280:intron 25.0%
! AAACAAACCAATAGTTGATT+AGG - chr3_4:17872282-17872301 Msa0493280:intron 25.0%
! AATAAAGTAGTCAAATGTCA+TGG + chr3_4:17872325-17872344 None:intergenic 25.0%
!! AGAAATGATATAATGGGAAT+TGG + chr3_4:17872418-17872437 None:intergenic 25.0%
! GTTTGGAGAAATGATATAAT+GGG + chr3_4:17872424-17872443 None:intergenic 25.0%
!!! TAGCACAATTTTTTTTAGTG+AGG - chr3_4:17872460-17872479 Msa0493280:intron 25.0%
!!! TATTTTTCAAGGTGATAGAA+AGG - chr3_4:17872650-17872669 Msa0493280:intron 25.0%
! CAATCATATGCACAATTAAA+AGG + chr3_4:17872968-17872987 None:intergenic 25.0%
! TTACGATTTAAATCGTGATT+TGG - chr3_4:17873374-17873393 Msa0493280:intron 25.0%
! TCTTGTGCAAATGATATTAT+TGG - chr3_4:17873588-17873607 Msa0493280:CDS 25.0%
! ACACTATATCAATCATATTC+AGG + chr3_4:17873664-17873683 None:intergenic 25.0%
!! GATGTTATAAGTCTATTTTG+AGG + chr3_4:17873764-17873783 None:intergenic 25.0%
!!! ATATTTTAATGCTGGCAAAA+TGG - chr3_4:17874218-17874237 Msa0493280:CDS 25.0%
TTTATAAATGGCTTGAAGCT+TGG - chr3_4:17869675-17869694 Msa0493280:three_prime_UTR 30.0%
TTATAAATGGCTTGAAGCTT+GGG - chr3_4:17869676-17869695 Msa0493280:three_prime_UTR 30.0%
GATCCTTGAATCAAAAATCA+TGG - chr3_4:17869755-17869774 Msa0493280:CDS 30.0%
ACTAAGAAAGAGATTGAACA+TGG - chr3_4:17869840-17869859 Msa0493280:intron 30.0%
GCATAGTCAGATTATTCATT+AGG + chr3_4:17870193-17870212 None:intergenic 30.0%
GTCATGATTATGTTATGCTT+AGG - chr3_4:17870426-17870445 Msa0493280:intron 30.0%
! TTTTTCTTTACCTTTTCCAC+GGG + chr3_4:17870740-17870759 None:intergenic 30.0%
! CTTTTTCTTTACCTTTTCCA+CGG + chr3_4:17870741-17870760 None:intergenic 30.0%
! ACATAAGACTTTGGATGTTT+TGG - chr3_4:17870890-17870909 Msa0493280:intron 30.0%
AAGTGCGTTAAAACTGATAT+TGG + chr3_4:17870967-17870986 None:intergenic 30.0%
TATTCTAGACACTTTCAAAC+CGG - chr3_4:17870992-17871011 Msa0493280:intron 30.0%
! AATTCTGTATCAGTTTTGCA+TGG + chr3_4:17871056-17871075 None:intergenic 30.0%
ATGCAAAACTGATACAGAAT+TGG - chr3_4:17871055-17871074 Msa0493280:intron 30.0%
TCAGTTCATAAACAAAAGCA+TGG - chr3_4:17871193-17871212 Msa0493280:intron 30.0%
TTATACATGCATCTATCTCT+TGG + chr3_4:17871608-17871627 None:intergenic 30.0%
GAAACCAATAGTTATTCATC+AGG - chr3_4:17871765-17871784 Msa0493280:intron 30.0%
AATCCCTGATGAATAACTAT+TGG + chr3_4:17871772-17871791 None:intergenic 30.0%
TTAGTTATCTAGAGATTGAG+AGG - chr3_4:17871817-17871836 Msa0493280:intron 30.0%
TAGTTATCTAGAGATTGAGA+GGG - chr3_4:17871818-17871837 Msa0493280:intron 30.0%
AAACACCTTGACTATTGAAT+TGG - chr3_4:17872110-17872129 Msa0493280:intron 30.0%
!! AAGCGACATTCATTTTGAAA+CGG + chr3_4:17872164-17872183 None:intergenic 30.0%
GGTTTGGAGAAATGATATAA+TGG + chr3_4:17872425-17872444 None:intergenic 30.0%
! ATGTCTCATTTTCATTTCTC+TGG - chr3_4:17872591-17872610 Msa0493280:intron 30.0%
TGTTTATCATTATCAGTGCT+TGG - chr3_4:17872698-17872717 Msa0493280:intron 30.0%
TGATGACTAACATGAATAGA+GGG + chr3_4:17872769-17872788 None:intergenic 30.0%
! TTGATGACTAACATGAATAG+AGG + chr3_4:17872770-17872789 None:intergenic 30.0%
AAACTGAGTGAATTCTAACA+GGG - chr3_4:17873145-17873164 Msa0493280:CDS 30.0%
GTAGTGATTCAGAGAAAAAA+TGG - chr3_4:17873180-17873199 Msa0493280:intron 30.0%
ATCTTGTATAGGATCTATGT+TGG - chr3_4:17873336-17873355 Msa0493280:intron 30.0%
TCTTGTATAGGATCTATGTT+GGG - chr3_4:17873337-17873356 Msa0493280:intron 30.0%
ATTCAAATTGACAATGAGCA+TGG - chr3_4:17873419-17873438 Msa0493280:intron 30.0%
! TGTTTTGCTGCTAAGTTATA+TGG - chr3_4:17873562-17873581 Msa0493280:intron 30.0%
TCTATTGAAACGAACAAACA+CGG + chr3_4:17873816-17873835 None:intergenic 30.0%
TGTTTGTTCGTTTCAATAGA+AGG - chr3_4:17873816-17873835 Msa0493280:intron 30.0%
GTTTGTTCGTTTCAATAGAA+GGG - chr3_4:17873817-17873836 Msa0493280:intron 30.0%
! AATTGCTTAGTTTCGTTTTG+TGG - chr3_4:17873858-17873877 Msa0493280:intron 30.0%
AGAGAACATTGCCATATAAT+GGG + chr3_4:17874107-17874126 None:intergenic 30.0%
! TTTTTCTACCGGAACAAACT+TGG - chr3_4:17869634-17869653 Msa0493280:three_prime_UTR 35.0%
! TGATAAAGCCAAGTTTGTTC+CGG + chr3_4:17869645-17869664 None:intergenic 35.0%
!! CTGCCATGATTTTTGATTCA+AGG + chr3_4:17869761-17869780 None:intergenic 35.0%
!! TAGAGAGAGTTTTAGCATGA+TGG - chr3_4:17869806-17869825 Msa0493280:CDS 35.0%
!! AGAGAGAGTTTTAGCATGAT+GGG - chr3_4:17869807-17869826 Msa0493280:CDS 35.0%
! CCTATCTAAGGTATAACCAA+CGG + chr3_4:17870075-17870094 None:intergenic 35.0%
! CATGATCCGAGTTCATTTTA+CGG + chr3_4:17870151-17870170 None:intergenic 35.0%
TAGATCGTCAAGAACTAGTA+AGG - chr3_4:17870256-17870275 Msa0493280:intron 35.0%
ATTCTAAACAGGACGATTAG+GGG + chr3_4:17870403-17870422 None:intergenic 35.0%
GATTCTAAACAGGACGATTA+GGG + chr3_4:17870404-17870423 None:intergenic 35.0%
ATCATGACACGATTCTAAAC+AGG + chr3_4:17870414-17870433 None:intergenic 35.0%
! TTCTCTTCTTACCTTGCTAT+AGG + chr3_4:17870529-17870548 None:intergenic 35.0%
GTGTCTACAATACAACCTAA+CGG + chr3_4:17870611-17870630 None:intergenic 35.0%
AACCTGAACAAATAAGGAGA+GGG + chr3_4:17870708-17870727 None:intergenic 35.0%
ATTCTAGACACTTTCAAACC+GGG - chr3_4:17870993-17871012 Msa0493280:intron 35.0%
ATTTGAGAACATGTAACACC+CGG + chr3_4:17871014-17871033 None:intergenic 35.0%
ACCACAAAATCAGTCTGAAT+TGG - chr3_4:17871223-17871242 Msa0493280:intron 35.0%
CCACAAAATCAGTCTGAATT+GGG - chr3_4:17871224-17871243 Msa0493280:intron 35.0%
!!! TGTTTTAGGAGTGTGGATAT+TGG - chr3_4:17871355-17871374 Msa0493280:intron 35.0%
ACATACTTTGCAAACATGCA+AGG + chr3_4:17871584-17871603 None:intergenic 35.0%
GATTTGACTCTTCCATTTGT+TGG - chr3_4:17872039-17872058 Msa0493280:intron 35.0%
GTAAGCCAATTCAATAGTCA+AGG + chr3_4:17872118-17872137 None:intergenic 35.0%
!!! GACATTCATTTTGAAACGGA+GGG + chr3_4:17872160-17872179 None:intergenic 35.0%
CATTCCTTAATGTGTGCAAT+TGG - chr3_4:17872346-17872365 Msa0493280:intron 35.0%
TTTGCCAATTGCACACATTA+AGG + chr3_4:17872353-17872372 None:intergenic 35.0%
!! AAGCGTCACTCATTTTGAAA+CGG - chr3_4:17872372-17872391 Msa0493280:intron 35.0%
! TGATATAATGGGAATTGGAG+AGG + chr3_4:17872413-17872432 None:intergenic 35.0%
AATTCTACAACTGCAAGGTT+TGG + chr3_4:17872441-17872460 None:intergenic 35.0%
CTCTGGATTTGAGAATTAGA+AGG - chr3_4:17872608-17872627 Msa0493280:intron 35.0%
ATTATCAGTGCTTGGATATG+TGG - chr3_4:17872706-17872725 Msa0493280:intron 35.0%
CAAAATCAACTGACTGGTAA+TGG + chr3_4:17872894-17872913 None:intergenic 35.0%
!! CATTACCAGTCAGTTGATTT+TGG - chr3_4:17872892-17872911 Msa0493280:CDS 35.0%
TATCACCAAAATCAACTGAC+TGG + chr3_4:17872900-17872919 None:intergenic 35.0%
! TTGTTGTTGTTACTGCTTAG+TGG - chr3_4:17873002-17873021 Msa0493280:intron 35.0%
CAGCTAGGGAATAAAATGAA+AGG + chr3_4:17873075-17873094 None:intergenic 35.0%
GAAACTGAGTGAATTCTAAC+AGG - chr3_4:17873144-17873163 Msa0493280:CDS 35.0%
AACTGAGTGAATTCTAACAG+GGG - chr3_4:17873146-17873165 Msa0493280:CDS 35.0%
CCAGGATCGTAAAAATGAAT+AGG + chr3_4:17873267-17873286 None:intergenic 35.0%
!! CCTATTCATTTTTACGATCC+TGG - chr3_4:17873264-17873283 Msa0493280:intron 35.0%
CTTACCAAGTGATCTTGTAT+AGG - chr3_4:17873325-17873344 Msa0493280:intron 35.0%
AGATCCTATACAAGATCACT+TGG + chr3_4:17873332-17873351 None:intergenic 35.0%
CTTGTATAGGATCTATGTTG+GGG - chr3_4:17873338-17873357 Msa0493280:intron 35.0%
TTGTATAGGATCTATGTTGG+GGG - chr3_4:17873339-17873358 Msa0493280:intron 35.0%
AGTGTACAATTCCATAGCAT+TGG - chr3_4:17873630-17873649 Msa0493280:CDS 35.0%
!!! TAAGTCTATTTTGAGGCTTC+AGG + chr3_4:17873757-17873776 None:intergenic 35.0%
!!! GAAATGTCTCTTTTTCAGCT+TGG - chr3_4:17873790-17873809 Msa0493280:intron 35.0%
TCAATAGAAGGGTTATTTGC+TGG - chr3_4:17873828-17873847 Msa0493280:intron 35.0%
TTGTGGAGTAAAACTAGATG+AGG - chr3_4:17873963-17873982 Msa0493280:CDS 35.0%
GAGAACATTGCCATATAATG+GGG + chr3_4:17874106-17874125 None:intergenic 35.0%
CAGAGAACATTGCCATATAA+TGG + chr3_4:17874108-17874127 None:intergenic 35.0%
ATATGGCAATGTTCTCTGTT+TGG - chr3_4:17874110-17874129 Msa0493280:CDS 35.0%
ATCAAAGATACGTTGTCATG+AGG + chr3_4:17874168-17874187 None:intergenic 35.0%
ACACGCGAAAACACAAGTTA+CGG - chr3_4:17869441-17869460 Msa0493280:three_prime_UTR 40.0%
ATACTTCGAAACGATCGCTA+CGG + chr3_4:17869594-17869613 None:intergenic 40.0%
! GCTTGGGTTTATGGCATTTT+CGG - chr3_4:17869692-17869711 Msa0493280:exon 40.0%
CAGTCTTAGCATGTATCACA+AGG - chr3_4:17869778-17869797 Msa0493280:CDS 40.0%
CTTAGCATGTATCACAAGGA+TGG - chr3_4:17869782-17869801 Msa0493280:CDS 40.0%
!! GAGAGAGTTTTAGCATGATG+GGG - chr3_4:17869808-17869827 Msa0493280:CDS 40.0%
! CCGTTGGTTATACCTTAGAT+AGG - chr3_4:17870072-17870091 Msa0493280:intron 40.0%
TACCTTAGATAGGTTCCCAT+CGG - chr3_4:17870082-17870101 Msa0493280:intron 40.0%
ACAATCCCTATCTAACCGAT+GGG + chr3_4:17870100-17870119 None:intergenic 40.0%
GGCTTTCCGTAAAATGAACT+CGG - chr3_4:17870142-17870161 Msa0493280:intron 40.0%
CGATTCTAAACAGGACGATT+AGG + chr3_4:17870405-17870424 None:intergenic 40.0%
CTTCACTTCTATACGTGTCA+TGG + chr3_4:17870506-17870525 None:intergenic 40.0%
TAGAAGTGAAGCCTATAGCA+AGG - chr3_4:17870515-17870534 Msa0493280:intron 40.0%
GGTAAGAAGAGAACCTAAGA+CGG - chr3_4:17870536-17870555 Msa0493280:intron 40.0%
GTAAGAAGAGAACCTAAGAC+GGG - chr3_4:17870537-17870556 Msa0493280:intron 40.0%
TGTGGTTATGCTTTCCTAGA+CGG + chr3_4:17870575-17870594 None:intergenic 40.0%
AACGGTTGATTATACGTGTG+TGG + chr3_4:17870593-17870612 None:intergenic 40.0%
CACACGTATAATCAACCGTT+AGG - chr3_4:17870593-17870612 Msa0493280:intron 40.0%
TAGGTTGTATTGTAGACACG+TGG - chr3_4:17870612-17870631 Msa0493280:intron 40.0%
! GTTATCACTAGCTTAGGGAT+AGG - chr3_4:17870654-17870673 Msa0493280:intron 40.0%
! ATCCCTCTCCTTATTTGTTC+AGG - chr3_4:17870703-17870722 Msa0493280:intron 40.0%
GAACCTGAACAAATAAGGAG+AGG + chr3_4:17870709-17870728 None:intergenic 40.0%
CCTGAGAACCTGAACAAATA+AGG + chr3_4:17870714-17870733 None:intergenic 40.0%
! CCTTATTTGTTCAGGTTCTC+AGG - chr3_4:17870711-17870730 Msa0493280:intron 40.0%
TTTCAAACTGAGCCAGTTGA+AGG + chr3_4:17871142-17871161 None:intergenic 40.0%
!! CCCAATTCAGACTGATTTTG+TGG + chr3_4:17871227-17871246 None:intergenic 40.0%
! TGGATATTGGAGTGTTCATG+TGG - chr3_4:17871368-17871387 Msa0493280:intron 40.0%
! TGAACGGTGTCAAATAGAGT+AGG - chr3_4:17871393-17871412 Msa0493280:intron 40.0%
TGGTAGTTTCAGCTAGTGTT+TGG - chr3_4:17871496-17871515 Msa0493280:intron 40.0%
TAGAGATTGAGAGGGAATAG+AGG - chr3_4:17871826-17871845 Msa0493280:intron 40.0%
TTTCCCATGTAACCATGTGT+TGG - chr3_4:17871869-17871888 Msa0493280:intron 40.0%
TTCCCATGTAACCATGTGTT+GGG - chr3_4:17871870-17871889 Msa0493280:intron 40.0%
!!! CGACATTCATTTTGAAACGG+AGG + chr3_4:17872161-17872180 None:intergenic 40.0%
!!! GTCACTCATTTTGAAACGGT+GGG - chr3_4:17872376-17872395 Msa0493280:intron 40.0%
GTGCTAATTCTACAACTGCA+AGG + chr3_4:17872446-17872465 None:intergenic 40.0%
TTCAAGGTGATAGAAAGGTG+AGG - chr3_4:17872655-17872674 Msa0493280:intron 40.0%
!! GTGGTGTCAAGTTTTGTGAT+TGG - chr3_4:17873021-17873040 Msa0493280:intron 40.0%
!! TGTCAAGTTTTGTGATTGGC+TGG - chr3_4:17873025-17873044 Msa0493280:intron 40.0%
!! GTCAAGTTTTGTGATTGGCT+GGG - chr3_4:17873026-17873045 Msa0493280:intron 40.0%
CAGTGAATACATAGCAGCTA+GGG + chr3_4:17873089-17873108 None:intergenic 40.0%
ACAGTGAATACATAGCAGCT+AGG + chr3_4:17873090-17873109 None:intergenic 40.0%
! CTGTGTTGATAGAGAGATGT+GGG - chr3_4:17873113-17873132 Msa0493280:intron 40.0%
!!! GGTTTTTTGTGTCGAAAGTG+CGG + chr3_4:17873246-17873265 None:intergenic 40.0%
AGGACATTTCACCAATGCTA+TGG + chr3_4:17873644-17873663 None:intergenic 40.0%
CATTACAAGGCAAACACACA+TGG + chr3_4:17873711-17873730 None:intergenic 40.0%
! CTTAGTTTCGTTTTGTGGTC+TGG - chr3_4:17873863-17873882 Msa0493280:intron 40.0%
! CTGAAGATGGTGGTGAAAAA+GGG - chr3_4:17873893-17873912 Msa0493280:intron 40.0%
!!! GGAGAGTACAACACTTTTTC+TGG + chr3_4:17874057-17874076 None:intergenic 40.0%
TGTTCTGCATGTTTCTCCTA+GGG - chr3_4:17874077-17874096 Msa0493280:CDS 40.0%
TGGCTTGAAGCTTGGGTTTA+TGG - chr3_4:17869683-17869702 Msa0493280:three_prime_UTR 45.0%
AGAGATTGAACATGGAGCCT+CGG - chr3_4:17869848-17869867 Msa0493280:intron 45.0%
TGTCTCTTGTGATCCACACT+AGG - chr3_4:17869978-17869997 Msa0493280:intron 45.0%
TCTTGTGATCCACACTAGGT+TGG - chr3_4:17869982-17870001 Msa0493280:intron 45.0%
!! TCCACACTAGGTTGGTTTCA+AGG - chr3_4:17869990-17870009 Msa0493280:intron 45.0%
!! CCACACTAGGTTGGTTTCAA+GGG - chr3_4:17869991-17870010 Msa0493280:intron 45.0%
!! CACACTAGGTTGGTTTCAAG+GGG - chr3_4:17869992-17870011 Msa0493280:intron 45.0%
AACCGATGGGAACCTATCTA+AGG + chr3_4:17870087-17870106 None:intergenic 45.0%
! TAGGTTCCCATCGGTTAGAT+AGG - chr3_4:17870091-17870110 Msa0493280:intron 45.0%
! AGGTTCCCATCGGTTAGATA+GGG - chr3_4:17870092-17870111 Msa0493280:intron 45.0%
CACAATCCCTATCTAACCGA+TGG + chr3_4:17870101-17870120 None:intergenic 45.0%
GGTTAGATAGGGATTGTGCT+CGG - chr3_4:17870103-17870122 Msa0493280:intron 45.0%
GTTAGATAGGGATTGTGCTC+GGG - chr3_4:17870104-17870123 Msa0493280:intron 45.0%
! TCATTTTACGGAAAGCCCCA+GGG + chr3_4:17870139-17870158 None:intergenic 45.0%
! TTCATTTTACGGAAAGCCCC+AGG + chr3_4:17870140-17870159 None:intergenic 45.0%
GTTCTTGACGATCTACGTCA+AGG + chr3_4:17870251-17870270 None:intergenic 45.0%
GTTATGCCGATGACGAACTT+AGG - chr3_4:17870374-17870393 Msa0493280:intron 45.0%
GGGAAACCTAAGTTCGTCAT+CGG + chr3_4:17870383-17870402 None:intergenic 45.0%
AGAATACGCTCTACGTATCG+AGG + chr3_4:17870452-17870471 None:intergenic 45.0%
CGATACGTAGAGCGTATTCT+TGG - chr3_4:17870452-17870471 Msa0493280:intron 45.0%
AGAGCGTATTCTTGGCATTG+CGG - chr3_4:17870460-17870479 Msa0493280:intron 45.0%
CACTTCTATACGTGTCATGG+CGG + chr3_4:17870503-17870522 None:intergenic 45.0%
CTAAGCTAGTGATAACCTCG+GGG + chr3_4:17870650-17870669 None:intergenic 45.0%
CCTAAGCTAGTGATAACCTC+GGG + chr3_4:17870651-17870670 None:intergenic 45.0%
CCCTAAGCTAGTGATAACCT+CGG + chr3_4:17870652-17870671 None:intergenic 45.0%
! CCGAGGTTATCACTAGCTTA+GGG - chr3_4:17870649-17870668 Msa0493280:intron 45.0%
TTGGATTGATCGTGCTTACG+AGG - chr3_4:17870763-17870782 Msa0493280:intron 45.0%
CAACTAGTCCAACACCAAGT+TGG + chr3_4:17870791-17870810 None:intergenic 45.0%
! GAGTGTTCATGTGGACTGAA+CGG - chr3_4:17871377-17871396 Msa0493280:intron 45.0%
!! TGTGGAACGAGTTGATTGTG+TGG - chr3_4:17871476-17871495 Msa0493280:intron 45.0%
AGTGGTGAGACTTACACATG+AGG + chr3_4:17871721-17871740 None:intergenic 45.0%
GACCCAACACATGGTTACAT+GGG + chr3_4:17871875-17871894 None:intergenic 45.0%
AGACCCAACACATGGTTACA+TGG + chr3_4:17871876-17871895 None:intergenic 45.0%
CCATAATCAGACCCAACACA+TGG + chr3_4:17871884-17871903 None:intergenic 45.0%
CCATGTGTTGGGTCTGATTA+TGG - chr3_4:17871881-17871900 Msa0493280:intron 45.0%
TTGGGTCTGATTATGGAACG+AGG - chr3_4:17871888-17871907 Msa0493280:intron 45.0%
!!! CGTCACTCATTTTGAAACGG+TGG - chr3_4:17872375-17872394 Msa0493280:intron 45.0%
TTCTTACACCACTCGCTCTT+CGG - chr3_4:17872489-17872508 Msa0493280:intron 45.0%
AAGATAATCCGAAGAGCGAG+TGG + chr3_4:17872500-17872519 None:intergenic 45.0%
AGGTGATAGAAAGGTGAGGT+TGG - chr3_4:17872659-17872678 Msa0493280:intron 45.0%
TAGAGGGAAGCTATGCAAAG+CGG + chr3_4:17872753-17872772 None:intergenic 45.0%
! GCTGTGTTGATAGAGAGATG+TGG - chr3_4:17873112-17873131 Msa0493280:intron 45.0%
TTGATAGAGAGATGTGGGAG+AGG - chr3_4:17873118-17873137 Msa0493280:intron 45.0%
TGATAGAGAGATGTGGGAGA+GGG - chr3_4:17873119-17873138 Msa0493280:intron 45.0%
! ATTTTGCGGTCTCAGGATCT+TGG - chr3_4:17873292-17873311 Msa0493280:intron 45.0%
! TAGAAGGGTTATTTGCTGGC+TGG - chr3_4:17873832-17873851 Msa0493280:intron 45.0%
! GCTGAAGATGGTGGTGAAAA+AGG - chr3_4:17873892-17873911 Msa0493280:intron 45.0%
!! GGGTAATAGTTCTAGTGCTG+TGG - chr3_4:17873913-17873932 Msa0493280:intron 45.0%
CTAGGAGAAACATGCAGAAC+AGG + chr3_4:17874078-17874097 None:intergenic 45.0%
CTGTTCTGCATGTTTCTCCT+AGG - chr3_4:17874076-17874095 Msa0493280:CDS 45.0%
ACGCGAACGTTGTCATGTCT+GGG + chr3_4:17869531-17869550 None:intergenic 50.0%
AACGCGAACGTTGTCATGTC+TGG + chr3_4:17869532-17869551 None:intergenic 50.0%
!! CGTTCGCGTTGTTTTGCGTT+CGG - chr3_4:17869542-17869561 Msa0493280:three_prime_UTR 50.0%
!! GTTCGCGTTGTTTTGCGTTC+GGG - chr3_4:17869543-17869562 Msa0493280:three_prime_UTR 50.0%
!! TTGTTTTGCGTTCGGGTGCT+TGG - chr3_4:17869550-17869569 Msa0493280:three_prime_UTR 50.0%
! TGTTTTGCGTTCGGGTGCTT+GGG - chr3_4:17869551-17869570 Msa0493280:three_prime_UTR 50.0%
ATTCTCGACAAGCTATGCCG+AGG + chr3_4:17869868-17869887 None:intergenic 50.0%
CCCTTGAAACCAACCTAGTG+TGG + chr3_4:17869994-17870013 None:intergenic 50.0%
GGTTTCAAGGGGTTTCCACT+AGG - chr3_4:17870003-17870022 Msa0493280:intron 50.0%
GGGGTTTCCACTAGGTGAAA+CGG - chr3_4:17870011-17870030 Msa0493280:intron 50.0%
GGGTTTCCACTAGGTGAAAC+GGG - chr3_4:17870012-17870031 Msa0493280:intron 50.0%
GGTTTCCACTAGGTGAAACG+GGG - chr3_4:17870013-17870032 Msa0493280:intron 50.0%
AACCAACGGAACTCCCTTAG+TGG + chr3_4:17870061-17870080 None:intergenic 50.0%
ATACGTGTCATGGCGGTCAA+GGG + chr3_4:17870496-17870515 None:intergenic 50.0%
TATACGTGTCATGGCGGTCA+AGG + chr3_4:17870497-17870516 None:intergenic 50.0%
TGTAGACACGTGGTAACCGT+AGG - chr3_4:17870622-17870641 Msa0493280:intron 50.0%
TGATAACCTCGGGGAACCTA+CGG + chr3_4:17870641-17870660 None:intergenic 50.0%
! CCCGAGGTTATCACTAGCTT+AGG - chr3_4:17870648-17870667 Msa0493280:intron 50.0%
GGGATAGGTAGAACTCACTG+AGG - chr3_4:17870669-17870688 Msa0493280:intron 50.0%
TCTCAGGTTTCCCGTGGAAA+AGG - chr3_4:17870727-17870746 Msa0493280:intron 50.0%
GTGCTTACGAGGAACCAACT+TGG - chr3_4:17870774-17870793 Msa0493280:intron 50.0%
!! ACGAGGAACCAACTTGGTGT+TGG - chr3_4:17870780-17870799 Msa0493280:intron 50.0%
TGGAACGAGGCACACAAGAT+AGG - chr3_4:17871901-17871920 Msa0493280:intron 50.0%
AGAGGGAAGCTATGCAAAGC+GGG + chr3_4:17872752-17872771 None:intergenic 50.0%
CACTCGATCTCTCTATGTCG+CGG + chr3_4:17873218-17873237 None:intergenic 50.0%
! CGATCCTGGCTGCAATTTTG+CGG - chr3_4:17873278-17873297 Msa0493280:intron 50.0%
! CCATATAATGGGGCTACCCT+AGG + chr3_4:17874096-17874115 None:intergenic 50.0%
CCTAGGGTAGCCCCATTATA+TGG - chr3_4:17874093-17874112 Msa0493280:CDS 50.0%
CGCGAACGTTGTCATGTCTG+GGG + chr3_4:17869530-17869549 None:intergenic 55.0%
! GTTTTGCGTTCGGGTGCTTG+GGG - chr3_4:17869552-17869571 Msa0493280:three_prime_UTR 55.0%
! TTTTGCGTTCGGGTGCTTGG+GGG - chr3_4:17869553-17869572 Msa0493280:three_prime_UTR 55.0%
GCTAACCCCGTTTCACCTAG+TGG + chr3_4:17870021-17870040 None:intergenic 55.0%
!! GTGAAACGGGGTTAGCCGTA+AGG - chr3_4:17870025-17870044 Msa0493280:intron 55.0%
! TTTTACGGAAAGCCCCAGGG+TGG + chr3_4:17870136-17870155 None:intergenic 55.0%
TACGTGTCATGGCGGTCAAG+GGG + chr3_4:17870495-17870514 None:intergenic 55.0%
TCAGGTTCTCAGGTTTCCCG+TGG - chr3_4:17870721-17870740 Msa0493280:intron 55.0%
GCTATGCAAAGCGGGCAACT+AGG + chr3_4:17872744-17872763 None:intergenic 55.0%
GAGACCGCAAAATTGCAGCC+AGG + chr3_4:17873285-17873304 None:intergenic 55.0%
! GGCTGCAATTTTGCGGTCTC+AGG - chr3_4:17873285-17873304 Msa0493280:intron 55.0%
CGGTCTCAGGATCTTGGCTA+CGG - chr3_4:17873298-17873317 Msa0493280:intron 55.0%
! GTCTGGAGCTTCGCTGAAGA+TGG - chr3_4:17873880-17873899 Msa0493280:intron 55.0%
TGGAGCTTCGCTGAAGATGG+TGG - chr3_4:17873883-17873902 Msa0493280:intron 55.0%
!! GGAGCGTTGCGCCTGTACAA+GGG - chr3_4:17869462-17869481 Msa0493280:three_prime_UTR 60.0%
! CAGGGTTAGGGCGCCTATGT+GGG + chr3_4:17869497-17869516 None:intergenic 60.0%
AGTGGCGTGCGGGTTCCTTA+CGG + chr3_4:17870043-17870062 None:intergenic 60.0%
AAGGAACCCGCACGCCACTA+AGG - chr3_4:17870044-17870063 Msa0493280:intron 60.0%
AGGAACCCGCACGCCACTAA+GGG - chr3_4:17870045-17870064 Msa0493280:intron 60.0%
GAACTCCCTTAGTGGCGTGC+GGG + chr3_4:17870053-17870072 None:intergenic 60.0%
GGAACTCCCTTAGTGGCGTG+CGG + chr3_4:17870054-17870073 None:intergenic 60.0%
CGCCACTAAGGGAGTTCCGT+TGG - chr3_4:17870056-17870075 Msa0493280:intron 60.0%
TGCTCGGGTTTACTCCACCC+TGG - chr3_4:17870119-17870138 Msa0493280:intron 60.0%
GCTCGGGTTTACTCCACCCT+GGG - chr3_4:17870120-17870139 Msa0493280:intron 60.0%
CTCGGGTTTACTCCACCCTG+GGG - chr3_4:17870121-17870140 Msa0493280:intron 60.0%
TCGTGCACACGACCCGTCTT+AGG + chr3_4:17870552-17870571 None:intergenic 60.0%
TGGTAACCGTAGGTTCCCCG+AGG - chr3_4:17870632-17870651 Msa0493280:intron 60.0%
! GTTTTCGCGTGTTCCGCCGC+AGG + chr3_4:17869433-17869452 None:intergenic 65.0%
!! CGGAGCGTTGCGCCTGTACA+AGG - chr3_4:17869461-17869480 Msa0493280:three_prime_UTR 65.0%
!! TGCGCCTGTACAAGGGCGCT+AGG - chr3_4:17869469-17869488 Msa0493280:three_prime_UTR 65.0%
! CCAGGGTTAGGGCGCCTATG+TGG + chr3_4:17869498-17869517 None:intergenic 65.0%
CCACATAGGCGCCCTAACCC+TGG - chr3_4:17869495-17869514 Msa0493280:three_prime_UTR 65.0%
! GTTGTCATGTCTGGGGCGCC+TGG + chr3_4:17869523-17869542 None:intergenic 65.0%
GTGCTTGGGGGCAGTCGTGT+GGG - chr3_4:17869565-17869584 Msa0493280:three_prime_UTR 65.0%
TGCTTGGGGGCAGTCGTGTG+GGG - chr3_4:17869566-17869585 Msa0493280:three_prime_UTR 65.0%
GGTCGTGTGCACGACCGTCT+AGG - chr3_4:17870558-17870577 Msa0493280:intron 65.0%
GGCGCCTAGCGCCCTTGTAC+AGG + chr3_4:17869476-17869495 None:intergenic 70.0%
! AGGGCGCTAGGCGCCCACAT+AGG - chr3_4:17869481-17869500 Msa0493280:three_prime_UTR 70.0%
GGTGCTTGGGGGCAGTCGTG+TGG - chr3_4:17869564-17869583 Msa0493280:three_prime_UTR 70.0%
GCTTGGGGGCAGTCGTGTGG+GGG - chr3_4:17869567-17869586 Msa0493280:three_prime_UTR 70.0%
GGCGCCTGGCGCCAGGGTTA+GGG + chr3_4:17869509-17869528 None:intergenic 75.0%
! GGCGCCCTAACCCTGGCGCC+AGG - chr3_4:17869502-17869521 Msa0493280:three_prime_UTR 80.0%
! GGGCGCCTGGCGCCAGGGTT+AGG + chr3_4:17869510-17869529 None:intergenic 80.0%
!! GTCTGGGGCGCCTGGCGCCA+GGG + chr3_4:17869515-17869534 None:intergenic 80.0%
!! TGTCTGGGGCGCCTGGCGCC+AGG + chr3_4:17869516-17869535 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 17869420 17874241 17869420 ID=Msa0493280;Name=Msa0493280
chr3_4 mRNA 17869420 17874241 17869420 ID=Msa0493280-mRNA-1;Parent=Msa0493280;Name=Msa0493280-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0|0|0.16|0.16|1|1|6|286|184
chr3_4 exon 17869420 17869853 17869420 ID=Msa0493280-mRNA-1:exon:5027;Parent=Msa0493280-mRNA-1
chr3_4 exon 17872866 17872936 17872866 ID=Msa0493280-mRNA-1:exon:5026;Parent=Msa0493280-mRNA-1
chr3_4 exon 17873125 17873172 17873125 ID=Msa0493280-mRNA-1:exon:5025;Parent=Msa0493280-mRNA-1
chr3_4 exon 17873584 17873661 17873584 ID=Msa0493280-mRNA-1:exon:5024;Parent=Msa0493280-mRNA-1
chr3_4 exon 17873948 17873988 17873948 ID=Msa0493280-mRNA-1:exon:5023;Parent=Msa0493280-mRNA-1
chr3_4 exon 17874073 17874241 17874073 ID=Msa0493280-mRNA-1:exon:5022;Parent=Msa0493280-mRNA-1
chr3_4 CDS 17874073 17874241 17874073 ID=Msa0493280-mRNA-1:cds;Parent=Msa0493280-mRNA-1
chr3_4 CDS 17873948 17873988 17873948 ID=Msa0493280-mRNA-1:cds;Parent=Msa0493280-mRNA-1
chr3_4 CDS 17873584 17873661 17873584 ID=Msa0493280-mRNA-1:cds;Parent=Msa0493280-mRNA-1
chr3_4 CDS 17873125 17873172 17873125 ID=Msa0493280-mRNA-1:cds;Parent=Msa0493280-mRNA-1
chr3_4 CDS 17872866 17872936 17872866 ID=Msa0493280-mRNA-1:cds;Parent=Msa0493280-mRNA-1
chr3_4 CDS 17869706 17869853 17869706 ID=Msa0493280-mRNA-1:cds;Parent=Msa0493280-mRNA-1
chr3_4 three_prime_UTR 17869420 17869705 17869420 ID=Msa0493280-mRNA-1:three_prime_utr;Parent=Msa0493280-mRNA-1
Gene Sequence

>Msa0493280

ATGGCGAAAACCTGCGGCGGAACACGCGAAAACACAAGTTACGGAGCGTTGCGCCTGTACAAGGGCGCTAGGCGCCCACATAGGCGCCCTAACCCTGGCGCCAGGCGCCCCAGACATGACAACGTTCGCGTTGTTTTGCGTTCGGGTGCTTGGGGGCAGTCGTGTGGGGAATTTATAAATGGCTTGAAGCTTGGGTTTATGGCATTTTCGGTTGGTTTCAAGGGGTTTCCACTAGGTGAAACGGGGTTAGCCGTAAGGAACCCGCACGCCACTAAGGGAGTTCCGTTGATTCCCCTTGACCGCCATGACACGTATAGAAGTGAAGCCTATAGCAAGGTTCTCAGGTTTCCCGTGGAAAAGGTAAAGAAAAAGCTTTGGATTGATCGTGCTTACGAGGAACCAACTTGCTTGGCCGTGTTTGTTCGTTTCAATAGAAGGGTTATTTGCTGGCTGGCTGAATTGCTTAGTTTCGTTTTGTGGTCTGGAGCTTCGCTGAAGATGGTGGTGAAAAAGGGTAATAGTTCTAGTGCTGTGGAATTCCTAAATTCAGTTTAA
Protein sequence

>Msa0493280

MAKTCGGTRENTSYGALRLYKGARRPHRRPNPGARRPRHDNVRVVLRSGAWGQSCGEFINGLKLGFMAFSVGFKGFPLGETGLAVRNPHATKGVPLIPLDRHDTYRSEAYSKVLRFPVEKVKKKLWIDRAYEEPTCLAVFVRFNRRVICWLAELLSFVLWSGASLKMVVKKGNSSSAVEFLNSV*