AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0074700


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0074700 MtrunA17_Chr1g0182391 96.834 379 12 0 1 379 502 880 0.0 738
Msa0074700 MtrunA17_Chr5g0438781 89.446 379 40 0 1 379 502 880 0.0 653
Msa0074700 MtrunA17_Chr7g0232251 35.450 378 242 2 4 379 500 877 2.15e-69 234
Msa0074700 MtrunA17_Chr3g0102941 76.429 140 17 2 223 360 15 140 4.02e-63 199
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0074700 AT1G55250.2 57.895 380 159 1 1 379 4 383 2.11e-150 430
Msa0074700 AT1G55250.4 55.838 394 159 2 1 379 4 397 2.87e-146 420
Msa0074700 AT1G55250.5 58.355 377 156 1 4 379 505 881 1.52e-144 432
Msa0074700 AT1G55250.1 58.355 377 156 1 4 379 524 900 3.13e-144 431
Msa0074700 AT1G55250.3 56.091 394 158 2 1 379 506 899 2.99e-141 424
Msa0074700 AT2G44950.1 38.482 382 231 3 1 379 498 878 6.26e-75 249
Msa0074700 AT2G44950.2 44.379 169 93 1 1 168 498 666 2.07e-32 129

Find 63 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCGAAAATTGATTGCTTAT+TGG 0.134150 1_2:+49575902 None:intergenic
CTTCCACATCTTTCTGAATT+TGG 0.157200 1_2:+49578161 None:intergenic
CCTTGTGCTGTTTAATGTTT+TGG 0.226756 1_2:-49575983 Msa0074700:three_prime_UTR
CAGAATTCAGCTCAGCAATT+TGG 0.228587 1_2:+49577162 None:intergenic
CAAATGTGCTGAACAGGTTT+TGG 0.250460 1_2:-49581618 Msa0074700:CDS
GTTACAGATTGAAAAGTTAC+AGG 0.298097 1_2:-49581238 Msa0074700:intron
CAAACAAACAACATTGAAAA+AGG 0.303597 1_2:+49575958 None:intergenic
CTTTCAGATTCTCTAACTTC+TGG 0.330016 1_2:+49580386 None:intergenic
TCGGGAGTTAGAATTTGTTT+TGG 0.337092 1_2:-49581208 Msa0074700:CDS
AAGCTGAACTAGAGGAGTTA+AGG 0.349863 1_2:-49580244 Msa0074700:CDS
TTCCCACCTGGCAAACTCTA+AGG 0.353582 1_2:+49578252 None:intergenic
AGAGTTTGCCAGGTGGGAAT+TGG 0.354577 1_2:-49578248 Msa0074700:CDS
TGCAAACAAATGTGCTGAAC+AGG 0.371578 1_2:-49581624 Msa0074700:CDS
TCAATGTTCCTGTAGACTAT+TGG 0.374103 1_2:-49579332 Msa0074700:intron
CCTGCCTGTGGAACAGCATT+TGG 0.404398 1_2:-49576065 Msa0074700:CDS
AACCTCGATTTCAGATATAT+AGG 0.404698 1_2:+49579447 None:intergenic
AGCTGAACTAGAGGAGTTAA+GGG 0.411687 1_2:-49580243 Msa0074700:CDS
ATTTAGCGGCTTCTGATAGA+AGG 0.423094 1_2:+49578305 None:intergenic
TCAAGATTTCTTTGTATACA+TGG 0.438637 1_2:+49576107 None:intergenic
CAGCCGCCTTAGAGTTTGCC+AGG 0.439108 1_2:-49578258 Msa0074700:CDS
AAAAGTTACAGGAGGAGAAT+CGG 0.444664 1_2:-49581227 Msa0074700:CDS
GGAAGCTTGTGAAAAGGAAT+TGG 0.451020 1_2:-49578143 Msa0074700:CDS
TTCATCTTGAGTACATTTAG+CGG 0.459767 1_2:+49578291 None:intergenic
CCCAGTTTGATGAAAATGAA+AGG 0.491792 1_2:-49580220 Msa0074700:intron
GCCTAGAAGATTATCAGAAA+AGG 0.494202 1_2:-49581176 Msa0074700:intron
CGCCTTAGAGTTTGCCAGGT+GGG 0.494648 1_2:-49578254 Msa0074700:CDS
TTATGTCATGCAGGAGTTCA+CGG 0.495128 1_2:-49577220 Msa0074700:intron
TTCCACAGGCAGGACATTTG+CGG 0.497983 1_2:+49576075 None:intergenic
AAAGTTACAGGAGGAGAATC+GGG 0.500243 1_2:-49581226 Msa0074700:CDS
AGGCAGGACATTTGCGGTGA+CGG 0.501630 1_2:+49576081 None:intergenic
TGAGGCTATTAAAGTTAAAG+AGG 0.509176 1_2:-49579482 Msa0074700:CDS
CTTGTCTAAAAGTACTATCA+AGG 0.510264 1_2:+49575934 None:intergenic
CTGTCCAAATGCTGTTCCAC+AGG 0.513830 1_2:+49576061 None:intergenic
CCAAATGCTGTTCCACAGGC+AGG 0.515641 1_2:+49576065 None:intergenic
GTTCAGCACATTTGTTTGCA+AGG 0.516708 1_2:+49581627 None:intergenic
AGATGTGGAAGCTTGTGAAA+AGG 0.521111 1_2:-49578149 Msa0074700:CDS
CTGTTGAAGTTGATCAGCTA+AGG 0.522647 1_2:+49578499 None:intergenic
AAAAGGAATTGGACAGTGAA+AGG 0.524187 1_2:-49578132 Msa0074700:intron
AATGAAGTCTACAAAAGCAT+TGG 0.533686 1_2:-49581594 Msa0074700:intron
CCAACATCTGTTGCAGCAAG+TGG 0.560620 1_2:-49579279 Msa0074700:CDS
TATTAAAGTTAAAGAGGCTG+AGG 0.563348 1_2:-49579476 Msa0074700:CDS
GAGGGATGACTATAATATCA+AGG 0.565391 1_2:-49579252 Msa0074700:intron
CTGAAGCTGCTTGTGAACAA+AGG 0.572664 1_2:-49580280 Msa0074700:CDS
GGAATTGGCTGATGCTGAGA+AGG 0.575750 1_2:-49578233 Msa0074700:CDS
CCACTTGCTGCAACAGATGT+TGG 0.580687 1_2:+49579279 None:intergenic
AACCTATATATCTGAAATCG+AGG 0.589196 1_2:-49579449 Msa0074700:intron
AGCATCAGCCAATTCCCACC+TGG 0.596588 1_2:+49578240 None:intergenic
CGACCAAATTCAGAAAGATG+TGG 0.602428 1_2:-49578164 Msa0074700:CDS
ATTGCTGAGCTGAATTCTGA+AGG 0.603898 1_2:-49577158 Msa0074700:CDS
CACCGCAAATGTCCTGCCTG+TGG 0.609399 1_2:-49576077 Msa0074700:CDS
CTGTTCTGACCGTCCAAAGG+AGG 0.610575 1_2:-49577066 Msa0074700:intron
CAGAAGTTAGAGAATCTGAA+AGG 0.612893 1_2:-49580385 Msa0074700:CDS
CCAAAACATTAAACAGCACA+AGG 0.616290 1_2:+49575983 None:intergenic
GTTGCAGCAAGTGGCTGAGA+GGG 0.621288 1_2:-49579270 Msa0074700:CDS
TGTCTGTTCTGACCGTCCAA+AGG 0.626715 1_2:-49577069 Msa0074700:CDS
TGCTGCAGAAGCTGAACTAG+AGG 0.629556 1_2:-49580252 Msa0074700:CDS
GAGTTCACGGAAGAAGCTTG+AGG 0.633563 1_2:-49577207 Msa0074700:CDS
TGTTGCAGCAAGTGGCTGAG+AGG 0.640275 1_2:-49579271 Msa0074700:CDS
ACAGATTGAAAAGTTACAGG+AGG 0.653733 1_2:-49581235 Msa0074700:intron
GCTTGTATCAGAAAGCGTGA+AGG 0.670954 1_2:-49578561 Msa0074700:CDS
CAAACTCTAAGGCGGCTGCG+AGG 0.683577 1_2:+49578263 None:intergenic
CCGCCTTAGAGTTTGCCAGG+TGG 0.688256 1_2:-49578255 Msa0074700:CDS
CCACCTGGCAAACTCTAAGG+CGG 0.716860 1_2:+49578255 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATATCTTTAATATATAC+AGG - chr1_2:49577596-49577615 Msa0074700:intron 10.0%
!! TTTAAAAAAAAATGAAGAAA+TGG + chr1_2:49578540-49578559 None:intergenic 10.0%
!!! ATTTCTTCATTTTTTTTTAA+AGG - chr1_2:49578539-49578558 Msa0074700:CDS 10.0%
!!! TTTTTTTTAAAGGTTTTTAT+CGG - chr1_2:49578549-49578568 Msa0074700:CDS 10.0%
!! AAAATAAAATTTATAAGTAG+GGG + chr1_2:49579046-49579065 None:intergenic 10.0%
!! CAAAATAAAATTTATAAGTA+GGG + chr1_2:49579047-49579066 None:intergenic 10.0%
!! TCAAAATAAAATTTATAAGT+AGG + chr1_2:49579048-49579067 None:intergenic 10.0%
!!! GTAAAATCATATTTTATAAA+AGG - chr1_2:49579612-49579631 Msa0074700:intron 10.0%
!! ATTAAATTTAATCTCAAATG+AGG + chr1_2:49575962-49575981 None:intergenic 15.0%
!! TTAACATCTAACATAAAATT+TGG + chr1_2:49576445-49576464 None:intergenic 15.0%
!!! ATATTTGTGGTTTTTTATTT+GGG - chr1_2:49577339-49577358 Msa0074700:intron 15.0%
!! TTATTCTTATCTAATAACTT+AGG + chr1_2:49577560-49577579 None:intergenic 15.0%
!! ATTAGATAAGAATAATTGAA+TGG - chr1_2:49577565-49577584 Msa0074700:intron 15.0%
!!! TGTCACTAATATATTAATTT+TGG - chr1_2:49578351-49578370 Msa0074700:intron 15.0%
!!! AATTGATTTTGAAAATATTC+AGG - chr1_2:49578443-49578462 Msa0074700:intron 15.0%
!! AAAAAAAAAAAAAATCGCAA+AGG + chr1_2:49578476-49578495 None:intergenic 15.0%
!!! AATTTTTTTAAACAACTGAT+GGG - chr1_2:49578722-49578741 Msa0074700:intron 15.0%
!! TTTACATAAATAATTCCATT+TGG - chr1_2:49578815-49578834 Msa0074700:intron 15.0%
!! TTACATAAATAATTCCATTT+GGG - chr1_2:49578816-49578835 Msa0074700:intron 15.0%
!! AAATAAAATTTATAAGTAGG+GGG + chr1_2:49579045-49579064 None:intergenic 15.0%
!!! TTTTGTTAAATGTTTTGTTT+AGG + chr1_2:49579972-49579991 None:intergenic 15.0%
!!! TTTTATGGTTAAATTAACTT+GGG - chr1_2:49580434-49580453 Msa0074700:intron 15.0%
!!! TAAGCATCTATATTTTTATT+TGG - chr1_2:49580492-49580511 Msa0074700:intron 15.0%
!! GATAAATTACAAAACTTATT+TGG - chr1_2:49581153-49581172 Msa0074700:intron 15.0%
!! ATTATTTGTTTATACAACAG+AGG + chr1_2:49575924-49575943 None:intergenic 20.0%
!!! TATATGCATTATGATTTTAG+TGG - chr1_2:49576130-49576149 Msa0074700:CDS 20.0%
!! AAGTGGTACATAAAATAATT+AGG + chr1_2:49576686-49576705 None:intergenic 20.0%
!!! AATGAATTTTAAAGGAATAG+TGG + chr1_2:49576730-49576749 None:intergenic 20.0%
!!! AAAAGGTCAATGAATTTTAA+AGG + chr1_2:49576738-49576757 None:intergenic 20.0%
!! CTATAATTAAGTTCTTGAAA+AGG + chr1_2:49576755-49576774 None:intergenic 20.0%
!! GCTTAACTATTTAAAAAGTT+GGG + chr1_2:49576951-49576970 None:intergenic 20.0%
!! GCAATAAAACATTTATCATA+AGG + chr1_2:49576973-49576992 None:intergenic 20.0%
!!! GATAAATGTTTTATTGCATT+TGG - chr1_2:49576976-49576995 Msa0074700:intron 20.0%
!! CAAATAAAAAACCACAAATA+TGG + chr1_2:49577340-49577359 None:intergenic 20.0%
!!! CATATTTGTGGTTTTTTATT+TGG - chr1_2:49577338-49577357 Msa0074700:intron 20.0%
!! TAAGTATAGTAAATCTTTAG+TGG + chr1_2:49578650-49578669 None:intergenic 20.0%
!!! GAATTTTTTTAAACAACTGA+TGG - chr1_2:49578721-49578740 Msa0074700:intron 20.0%
!! TACATAAATAATTCCATTTG+GGG - chr1_2:49578817-49578836 Msa0074700:intron 20.0%
!! TTTGCAATATGATAAAAACA+AGG + chr1_2:49578851-49578870 None:intergenic 20.0%
!! TTCTGTTTAAAAATATGTTC+CGG + chr1_2:49579371-49579390 None:intergenic 20.0%
!!! TAAACATGTTGATTTTAAGA+TGG - chr1_2:49579696-49579715 Msa0074700:intron 20.0%
!!! GTTCAGTTTTTAATTAATTG+TGG + chr1_2:49579899-49579918 None:intergenic 20.0%
!!! CTTTTATGGTTAAATTAACT+TGG - chr1_2:49580433-49580452 Msa0074700:intron 20.0%
!!! CATAAGTCATTTTTATGAAT+GGG + chr1_2:49580519-49580538 None:intergenic 20.0%
!! CTTATTCAATAAACTATACT+AGG + chr1_2:49580619-49580638 None:intergenic 20.0%
!! TAGAATATAACACTAAGATA+AGG - chr1_2:49580698-49580717 Msa0074700:intron 20.0%
!! TTTCAGTTCTTATAAAAAAG+AGG - chr1_2:49580842-49580861 Msa0074700:intron 20.0%
!! TTCAGTTCTTATAAAAAAGA+GGG - chr1_2:49580843-49580862 Msa0074700:intron 20.0%
!! AAGTTAATTAAGAGTTGTTT+AGG - chr1_2:49580943-49580962 Msa0074700:intron 20.0%
!!! AACTTCTTTATCTTGAATTT+TGG - chr1_2:49581105-49581124 Msa0074700:intron 20.0%
!!! ACTTCTTTATCTTGAATTTT+GGG - chr1_2:49581106-49581125 Msa0074700:intron 20.0%
! TTAATCTCAAATGAGGAAAA+TGG + chr1_2:49575955-49575974 None:intergenic 25.0%
! CATATAATGTTTGAGAATCA+TGG + chr1_2:49576116-49576135 None:intergenic 25.0%
! TTAGTTATAGACAATCTTGA+AGG + chr1_2:49576156-49576175 None:intergenic 25.0%
! AACAAAACATCTTAATGAGT+TGG + chr1_2:49576186-49576205 None:intergenic 25.0%
!!! GAATTTGTTTTGGATATGTA+TGG - chr1_2:49576243-49576262 Msa0074700:intron 25.0%
!! TTGTTATTCTATGTTGTGTT+TGG - chr1_2:49576350-49576369 Msa0074700:intron 25.0%
! TGTTATTCTATGTTGTGTTT+GGG - chr1_2:49576351-49576370 Msa0074700:intron 25.0%
! CTTACTACAGCAAATTAATT+CGG + chr1_2:49576384-49576403 None:intergenic 25.0%
!! TCTCTACATATTTTCATTGA+TGG - chr1_2:49576923-49576942 Msa0074700:intron 25.0%
! GGCTTAACTATTTAAAAAGT+TGG + chr1_2:49576952-49576971 None:intergenic 25.0%
!! AAAAATGCTTTAGATGAACA+TGG - chr1_2:49577106-49577125 Msa0074700:CDS 25.0%
! AAAAGATTATGTAGAGTTCA+AGG - chr1_2:49577403-49577422 Msa0074700:intron 25.0%
! TATCTAATAACTTAGGCTTT+GGG + chr1_2:49577553-49577572 None:intergenic 25.0%
! TTATCTAATAACTTAGGCTT+TGG + chr1_2:49577554-49577573 None:intergenic 25.0%
! TGGTAAAAAACGAAAAAACA+TGG + chr1_2:49577795-49577814 None:intergenic 25.0%
!!! CAGATTTTTTCTGAATAGTA+GGG + chr1_2:49577931-49577950 None:intergenic 25.0%
! TATAAACAGTTGTTAGTTGA+CGG - chr1_2:49578053-49578072 Msa0074700:intron 25.0%
! AGCATTAATTTATCATCAAC+TGG + chr1_2:49578324-49578343 None:intergenic 25.0%
! ACAATTAAAAGTTAGTTGCA+AGG - chr1_2:49578583-49578602 Msa0074700:intron 25.0%
! ATAGTAAATCTTTAGTGGTT+TGG + chr1_2:49578645-49578664 None:intergenic 25.0%
! GATTGTAAATAGTGAAAAAC+AGG - chr1_2:49578997-49579016 Msa0074700:intron 25.0%
! AAACAGAAATATTCACATCA+AGG - chr1_2:49579383-49579402 Msa0074700:intron 25.0%
! AACAGAGAGAAAATTTAGTT+TGG - chr1_2:49579672-49579691 Msa0074700:intron 25.0%
! CTTTAATTCATGTAACTGTT+CGG - chr1_2:49579805-49579824 Msa0074700:intron 25.0%
! TACGAAACGATGTAAAATAT+AGG + chr1_2:49579854-49579873 None:intergenic 25.0%
! TAACTAACACCCAATAAAAA+TGG - chr1_2:49579939-49579958 Msa0074700:intron 25.0%
!!! CCATAAGTCATTTTTATGAA+TGG + chr1_2:49580520-49580539 None:intergenic 25.0%
! CCATTCATAAAAATGACTTA+TGG - chr1_2:49580517-49580536 Msa0074700:intron 25.0%
! ATTCAATAAACTATACTAGG+AGG + chr1_2:49580616-49580635 None:intergenic 25.0%
! GCAATAGTTGCAATATTTAT+TGG - chr1_2:49580754-49580773 Msa0074700:intron 25.0%
! TGCAATATTTATTGGAATCT+AGG - chr1_2:49580762-49580781 Msa0074700:intron 25.0%
! AGTTTCAGTTATAAAAGAGA+GGG - chr1_2:49580895-49580914 Msa0074700:intron 25.0%
! TTCCAATAAATATTACAGCT+CGG - chr1_2:49580989-49581008 Msa0074700:intron 25.0%
! GAAATGGAAATAATAAACCA+GGG + chr1_2:49581031-49581050 None:intergenic 25.0%
! TGAAATGGAAATAATAAACC+AGG + chr1_2:49581032-49581051 None:intergenic 25.0%
!! CTTCTTTATCTTGAATTTTG+GGG - chr1_2:49581107-49581126 Msa0074700:intron 25.0%
!!! TCTATCAGATTGTTTTGAAA+TGG - chr1_2:49581131-49581150 Msa0074700:intron 25.0%
!! AACTTATTTGGCATATTTTC+TGG - chr1_2:49581165-49581184 Msa0074700:intron 25.0%
!! ACTTATTTGGCATATTTTCT+GGG - chr1_2:49581166-49581185 Msa0074700:intron 25.0%
! TCAAGATTTCTTTGTATACA+TGG + chr1_2:49581337-49581356 None:intergenic 25.0%
! CAAACAAACAACATTGAAAA+AGG + chr1_2:49581486-49581505 None:intergenic 25.0%
!! TCCAATAAGCAATCAATTTT+CGG - chr1_2:49581538-49581557 Msa0074700:intron 25.0%
!! AATTTTCGGATTGTAGATAT+TGG - chr1_2:49581552-49581571 Msa0074700:intron 25.0%
!! ATTTTCGGATTGTAGATATT+GGG - chr1_2:49581553-49581572 Msa0074700:intron 25.0%
!!! ACTTGTTTTGTGTATGATAT+TGG - chr1_2:49581585-49581604 Msa0074700:intron 25.0%
! AATGAAGTCTACAAAAGCAT+TGG - chr1_2:49575847-49575866 Msa0074700:three_prime_UTR 30.0%
!! GAAATGCTCTAAGATTTAGA+AGG + chr1_2:49576008-49576027 None:intergenic 30.0%
ACAAGCAAAACACAAAACAA+AGG + chr1_2:49576074-49576093 None:intergenic 30.0%
! TTGAGAATCATGGAAAGTAT+AGG + chr1_2:49576106-49576125 None:intergenic 30.0%
GTTACAGATTGAAAAGTTAC+AGG - chr1_2:49576203-49576222 Msa0074700:intron 30.0%
! ACCTTTTCTGATAATCTTCT+AGG + chr1_2:49576269-49576288 None:intergenic 30.0%
!! AATCAGCGGATTTTAAACAT+GGG + chr1_2:49576588-49576607 None:intergenic 30.0%
TATTCTAATCTATTCTCCCT+TGG - chr1_2:49576835-49576854 Msa0074700:intron 30.0%
! GCATTTGGTTAATTAACTTG+AGG - chr1_2:49576991-49577010 Msa0074700:intron 30.0%
! CCTTTCATTTTCATCAAACT+GGG + chr1_2:49577224-49577243 None:intergenic 30.0%
! ACCTTTCATTTTCATCAAAC+TGG + chr1_2:49577225-49577244 None:intergenic 30.0%
! GCATACTACTACATTGATTA+TGG - chr1_2:49577255-49577274 Msa0074700:intron 30.0%
AATATGGAACTAAAAGGGAA+GGG + chr1_2:49577324-49577343 None:intergenic 30.0%
AAATATGGAACTAAAAGGGA+AGG + chr1_2:49577325-49577344 None:intergenic 30.0%
CCACAAATATGGAACTAAAA+GGG + chr1_2:49577329-49577348 None:intergenic 30.0%
ACCACAAATATGGAACTAAA+AGG + chr1_2:49577330-49577349 None:intergenic 30.0%
! TTATTTGGGAGTGAATTTTC+TGG - chr1_2:49577353-49577372 Msa0074700:intron 30.0%
! GAGTTTTTATCACAGAATGA+CGG - chr1_2:49577500-49577519 Msa0074700:intron 30.0%
! TATTGATTGCCTTCATATGA+AGG - chr1_2:49577836-49577855 Msa0074700:intron 30.0%
ATAGTAGGGCATATAAAACA+TGG + chr1_2:49577917-49577936 None:intergenic 30.0%
!!! CCAGATTTTTTCTGAATAGT+AGG + chr1_2:49577932-49577951 None:intergenic 30.0%
CCTACTATTCAGAAAAAATC+TGG - chr1_2:49577929-49577948 Msa0074700:intron 30.0%
TGAGGCTATTAAAGTTAAAG+AGG - chr1_2:49577959-49577978 Msa0074700:intron 30.0%
TATTAAAGTTAAAGAGGCTG+AGG - chr1_2:49577965-49577984 Msa0074700:intron 30.0%
! AACCTATATATCTGAAATCG+AGG - chr1_2:49577992-49578011 Msa0074700:intron 30.0%
AACCTCGATTTCAGATATAT+AGG + chr1_2:49577997-49578016 None:intergenic 30.0%
ATAAACAGTTGTTAGTTGAC+GGG - chr1_2:49578054-49578073 Msa0074700:intron 30.0%
AAAGTAGCATTTACAACTAC+TGG + chr1_2:49578230-49578249 None:intergenic 30.0%
ATGTTGATATGTTGAAGAAC+TGG - chr1_2:49578411-49578430 Msa0074700:intron 30.0%
!! CTGTTTTCAAGATTTAGCAT+TGG + chr1_2:49578612-49578631 None:intergenic 30.0%
! AAAGTTGATTCTAGCAGATA+TGG + chr1_2:49578748-49578767 None:intergenic 30.0%
AATTAAATTATCAGCCAAGC+TGG + chr1_2:49578774-49578793 None:intergenic 30.0%
TTCATCTTGAGTACATTTAG+CGG + chr1_2:49579153-49579172 None:intergenic 30.0%
AATCGATGAATTAGCGATAT+TGG - chr1_2:49579493-49579512 Msa0074700:CDS 30.0%
! ATGAATTAGCGATATTGGTT+CGG - chr1_2:49579498-49579517 Msa0074700:CDS 30.0%
TTGAACAACAAAATAGTTGC+TGG - chr1_2:49579755-49579774 Msa0074700:intron 30.0%
AAGAGATATCTCTCAAAAGA+TGG + chr1_2:49580000-49580019 None:intergenic 30.0%
! TATGCATTGATGTTTGACTT+TGG - chr1_2:49580141-49580160 Msa0074700:intron 30.0%
ATAAAAGCAAGAACTGTTGT+TGG + chr1_2:49580420-49580439 None:intergenic 30.0%
!! AACAACAGTTCTTGCTTTTA+TGG - chr1_2:49580419-49580438 Msa0074700:intron 30.0%
! TATGGTTAAATTAACTTGGG+AGG - chr1_2:49580437-49580456 Msa0074700:intron 30.0%
! ATGGTTAAATTAACTTGGGA+GGG - chr1_2:49580438-49580457 Msa0074700:intron 30.0%
! GCTGAAAACAACTTTTGAAT+AGG + chr1_2:49580543-49580562 None:intergenic 30.0%
GAGTTTCAGTTATAAAAGAG+AGG - chr1_2:49580894-49580913 Msa0074700:intron 30.0%
TCCAATAAATATTACAGCTC+GGG - chr1_2:49580990-49581009 Msa0074700:intron 30.0%
CAATGGTGATAAAACTGAAA+TGG + chr1_2:49581047-49581066 None:intergenic 30.0%
! ATCTCTTTGAACTTTGAAGA+AGG - chr1_2:49581213-49581232 Msa0074700:CDS 30.0%
AAACTCTTAGATAATGCTGT+TGG + chr1_2:49581262-49581281 None:intergenic 30.0%
!! CTTGTCTAAAAGTACTATCA+AGG + chr1_2:49581510-49581529 None:intergenic 30.0%
TCCGAAAATTGATTGCTTAT+TGG + chr1_2:49581542-49581561 None:intergenic 30.0%
! TTTTCGGATTGTAGATATTG+GGG - chr1_2:49581554-49581573 Msa0074700:intron 30.0%
ACAGATTGAAAAGTTACAGG+AGG - chr1_2:49576206-49576225 Msa0074700:intron 35.0%
AAAAGTTACAGGAGGAGAAT+CGG - chr1_2:49576214-49576233 Msa0074700:intron 35.0%
!! TCGGGAGTTAGAATTTGTTT+TGG - chr1_2:49576233-49576252 Msa0074700:intron 35.0%
GCCTAGAAGATTATCAGAAA+AGG - chr1_2:49576265-49576284 Msa0074700:intron 35.0%
! ATAACAAGCATTCTAGAGAC+TGG + chr1_2:49576546-49576565 None:intergenic 35.0%
!! CAATCAGCGGATTTTAAACA+TGG + chr1_2:49576589-49576608 None:intergenic 35.0%
ATCCACCAAAACTTGAATAC+AGG + chr1_2:49576622-49576641 None:intergenic 35.0%
!!! ATTCAAGTTTTGGTGGATTC+TGG - chr1_2:49576624-49576643 Msa0074700:intron 35.0%
!! TCTGGAACTTGCTTTGTTTA+TGG - chr1_2:49576642-49576661 Msa0074700:intron 35.0%
AATCCATGAAAATCAGCAAG+TGG + chr1_2:49576703-49576722 None:intergenic 35.0%
!!! ACTTGCTGATTTTCATGGAT+TGG - chr1_2:49576702-49576721 Msa0074700:intron 35.0%
! AGATTTGCAAAAGAAAGTGC+TGG + chr1_2:49576807-49576826 None:intergenic 35.0%
ATGGCAATACATACTTCAAG+TGG - chr1_2:49576861-49576880 Msa0074700:intron 35.0%
TGGCAATACATACTTCAAGT+GGG - chr1_2:49576862-49576881 Msa0074700:intron 35.0%
CTTTCAGATTCTCTAACTTC+TGG + chr1_2:49577058-49577077 None:intergenic 35.0%
CAGAAGTTAGAGAATCTGAA+AGG - chr1_2:49577056-49577075 Msa0074700:intron 35.0%
CCCAGTTTGATGAAAATGAA+AGG - chr1_2:49577221-49577240 Msa0074700:intron 35.0%
!! GATTTGCTGCATTGAAAAAC+TGG - chr1_2:49577277-49577296 Msa0074700:intron 35.0%
!!! CCCTTTTAGTTCCATATTTG+TGG - chr1_2:49577326-49577345 Msa0074700:intron 35.0%
! TCTAAAGGAGCACAATATAC+CGG + chr1_2:49577443-49577462 None:intergenic 35.0%
CTTTAGATAGTGTATGCCTT+GGG - chr1_2:49577456-49577475 Msa0074700:intron 35.0%
TCGTTTACTCCTTCATATGA+AGG + chr1_2:49577848-49577867 None:intergenic 35.0%
TGCATCAACAGATTGATAAG+CGG + chr1_2:49577886-49577905 None:intergenic 35.0%
AAAAAATCTGGAGATGACTG+AGG - chr1_2:49577941-49577960 Msa0074700:intron 35.0%
GAAGAAAAGTGAAGTCATGA+AGG + chr1_2:49578021-49578040 None:intergenic 35.0%
TCAATGTTCCTGTAGACTAT+TGG - chr1_2:49578109-49578128 Msa0074700:intron 35.0%
GAGGGATGACTATAATATCA+AGG - chr1_2:49578189-49578208 Msa0074700:CDS 35.0%
! CAGATGTCTTTGTTATGTCT+AGG - chr1_2:49578287-49578306 Msa0074700:CDS 35.0%
CTTCCACATCTTTCTGAATT+TGG + chr1_2:49579283-49579302 None:intergenic 35.0%
AAAAGGAATTGGACAGTGAA+AGG - chr1_2:49579309-49579328 Msa0074700:CDS 35.0%
CTTAGTCATTCGATCAAGTT+TGG - chr1_2:49579343-49579362 Msa0074700:intron 35.0%
!! TGAATTAGCGATATTGGTTC+GGG - chr1_2:49579499-49579518 Msa0074700:CDS 35.0%
! CTCAACAAGTTTTCGCAATT+AGG - chr1_2:49579640-49579659 Msa0074700:intron 35.0%
TTGCTGGAAATGAAAATGAC+AGG - chr1_2:49579771-49579790 Msa0074700:intron 35.0%
AGATATCTCTTTACTCGTCT+AGG - chr1_2:49580009-49580028 Msa0074700:intron 35.0%
TAGCATTTGCATTTCACCTA+GGG + chr1_2:49580036-49580055 None:intergenic 35.0%
ATAGCATTTGCATTTCACCT+AGG + chr1_2:49580037-49580056 None:intergenic 35.0%
! TGTCTAGATTCTGGAAAGTT+TGG - chr1_2:49580084-49580103 Msa0074700:intron 35.0%
ATGTGTTGAGCCAATTTAGA+GGG + chr1_2:49580191-49580210 None:intergenic 35.0%
TATGTGTTGAGCCAATTTAG+AGG + chr1_2:49580192-49580211 None:intergenic 35.0%
AGAACTGTTGTTGGAAAAGT+TGG + chr1_2:49580411-49580430 None:intergenic 35.0%
TTCTTAATGACTAACCCTCT+AGG + chr1_2:49580817-49580836 None:intergenic 35.0%
TAAAAAAGAGGGAAGTCTAG+AGG - chr1_2:49580854-49580873 Msa0074700:intron 35.0%
AAAAAAGAGGGAAGTCTAGA+GGG - chr1_2:49580855-49580874 Msa0074700:intron 35.0%
ACCCGAGCTGTAATATTTAT+TGG + chr1_2:49580994-49581013 None:intergenic 35.0%
ATAAATATTACAGCTCGGGT+AGG - chr1_2:49580994-49581013 Msa0074700:intron 35.0%
GGAAATAATAAACCAGGGTT+TGG + chr1_2:49581026-49581045 None:intergenic 35.0%
GAGTTTGATCTGTATTTGAC+AGG - chr1_2:49581276-49581295 Msa0074700:intron 35.0%
CCAAAACATTAAACAGCACA+AGG + chr1_2:49581461-49581480 None:intergenic 35.0%
!!! CCTTGTGCTGTTTAATGTTT+TGG - chr1_2:49581458-49581477 Msa0074700:intron 35.0%
GTTCAGCACATTTGTTTGCA+AGG + chr1_2:49575817-49575836 None:intergenic 40.0%
TGCAAACAAATGTGCTGAAC+AGG - chr1_2:49575817-49575836 Msa0074700:three_prime_UTR 40.0%
! CAAATGTGCTGAACAGGTTT+TGG - chr1_2:49575823-49575842 Msa0074700:three_prime_UTR 40.0%
!! AAGCATTGGTGAGTCTACTT+TGG - chr1_2:49575861-49575880 Msa0074700:three_prime_UTR 40.0%
AAAGTTACAGGAGGAGAATC+GGG - chr1_2:49576215-49576234 Msa0074700:intron 40.0%
! TCAGAAAAGGTATGCTGATC+TGG - chr1_2:49576278-49576297 Msa0074700:intron 40.0%
! CAGAAAAGGTATGCTGATCT+GGG - chr1_2:49576279-49576298 Msa0074700:intron 40.0%
! AGAAAAGGTATGCTGATCTG+GGG - chr1_2:49576280-49576299 Msa0074700:intron 40.0%
CTCTTGTAGCAAAGAGAAAG+AGG + chr1_2:49576475-49576494 None:intergenic 40.0%
! CGGATTTTAAACATGGGCAA+GGG + chr1_2:49576582-49576601 None:intergenic 40.0%
AACTTGAATACAGGAGGTCA+GGG + chr1_2:49576613-49576632 None:intergenic 40.0%
AAACTTGAATACAGGAGGTC+AGG + chr1_2:49576614-49576633 None:intergenic 40.0%
!! GACCTCCTGTATTCAAGTTT+TGG - chr1_2:49576614-49576633 Msa0074700:intron 40.0%
CACCAAAACTTGAATACAGG+AGG + chr1_2:49576619-49576638 None:intergenic 40.0%
!! CTCCTGTATTCAAGTTTTGG+TGG - chr1_2:49576617-49576636 Msa0074700:intron 40.0%
!!! GTACCACTTGCTGATTTTCA+TGG - chr1_2:49576697-49576716 Msa0074700:intron 40.0%
! CCATTGGTGGACAAAATTTG+AGG + chr1_2:49576782-49576801 None:intergenic 40.0%
! CCTCAAATTTTGTCCACCAA+TGG - chr1_2:49576779-49576798 Msa0074700:intron 40.0%
!! AAAGAAAGTGCTGGAACCAT+TGG + chr1_2:49576798-49576817 None:intergenic 40.0%
TCTAATCTATTCTCCCTTGG+AGG - chr1_2:49576838-49576857 Msa0074700:intron 40.0%
TATGTATTGCCATCCTCCAA+GGG + chr1_2:49576854-49576873 None:intergenic 40.0%
AAGCTGAACTAGAGGAGTTA+AGG - chr1_2:49577197-49577216 Msa0074700:CDS 40.0%
AGCTGAACTAGAGGAGTTAA+GGG - chr1_2:49577198-49577217 Msa0074700:CDS 40.0%
! TTCTGGTGATGAAGAGTGAA+AGG - chr1_2:49577370-49577389 Msa0074700:intron 40.0%
AGTTCAAGGACTTTGTCCTT+TGG - chr1_2:49577417-49577436 Msa0074700:intron 40.0%
CCAAGGCATACACTATCTAA+AGG + chr1_2:49577458-49577477 None:intergenic 40.0%
CCTTTAGATAGTGTATGCCT+TGG - chr1_2:49577455-49577474 Msa0074700:intron 40.0%
ATGACGGTCACTAGTTAATC+TGG - chr1_2:49577516-49577535 Msa0074700:intron 40.0%
TGACGGTCACTAGTTAATCT+GGG - chr1_2:49577517-49577536 Msa0074700:intron 40.0%
ATCAACAGATTGATAAGCGG+AGG + chr1_2:49577883-49577902 None:intergenic 40.0%
ATGCTTGACCAATAGTCTAC+AGG + chr1_2:49578120-49578139 None:intergenic 40.0%
GACATAACAAAGACATCTGC+AGG + chr1_2:49578286-49578305 None:intergenic 40.0%
! GAATCAACTTTTGACCAGCT+TGG - chr1_2:49578757-49578776 Msa0074700:intron 40.0%
! CTGTTGAAGTTGATCAGCTA+AGG + chr1_2:49578945-49578964 None:intergenic 40.0%
ATTTAGCGGCTTCTGATAGA+AGG + chr1_2:49579139-49579158 None:intergenic 40.0%
CGACCAAATTCAGAAAGATG+TGG - chr1_2:49579277-49579296 Msa0074700:CDS 40.0%
AGATGTGGAAGCTTGTGAAA+AGG - chr1_2:49579292-49579311 Msa0074700:CDS 40.0%
GGAAGCTTGTGAAAAGGAAT+TGG - chr1_2:49579298-49579317 Msa0074700:CDS 40.0%
CATTCGATCAAGTTTGGATC+CGG - chr1_2:49579349-49579368 Msa0074700:intron 40.0%
ACTAAACCTCACTTAGTGGA+GGG + chr1_2:49579418-49579437 None:intergenic 40.0%
ACACACTAAACCTCACTTAG+TGG + chr1_2:49579422-49579441 None:intergenic 40.0%
! TCATCGATTACACAACCTTG+CGG + chr1_2:49579482-49579501 None:intergenic 40.0%
AAGAACCGTGGTATATGGTT+CGG - chr1_2:49579549-49579568 Msa0074700:intron 40.0%
TACACAAACTAAGCAGCCAT+GGG + chr1_2:49579595-49579614 None:intergenic 40.0%
TTACACAAACTAAGCAGCCA+TGG + chr1_2:49579596-49579615 None:intergenic 40.0%
!!! GGACTGCTGCCATTTTTATT+GGG + chr1_2:49579951-49579970 None:intergenic 40.0%
!!! AGGACTGCTGCCATTTTTAT+TGG + chr1_2:49579952-49579971 None:intergenic 40.0%
GAGTGAAATGCCCTCTAAAT+TGG - chr1_2:49580178-49580197 Msa0074700:intron 40.0%
CTCATCCAATTATGTCATGC+AGG - chr1_2:49580212-49580231 Msa0074700:intron 40.0%
GAACTCCTGCATGACATAAT+TGG + chr1_2:49580220-49580239 None:intergenic 40.0%
TTATGTCATGCAGGAGTTCA+CGG - chr1_2:49580221-49580240 Msa0074700:CDS 40.0%
CAGAATTCAGCTCAGCAATT+TGG + chr1_2:49580282-49580301 None:intergenic 40.0%
ATTGCTGAGCTGAATTCTGA+AGG - chr1_2:49580283-49580302 Msa0074700:CDS 40.0%
!!! CTGTTTTTACCTCCTTTGGA+CGG + chr1_2:49580387-49580406 None:intergenic 40.0%
! AATGCACACATGCTGTCTTT+TGG - chr1_2:49580661-49580680 Msa0074700:intron 40.0%
TAGAAGCTTGTAGAAGCTGT+AGG - chr1_2:49580728-49580747 Msa0074700:intron 40.0%
TAAAAGAGAGGGAAGTCTAG+AGG - chr1_2:49580906-49580925 Msa0074700:intron 40.0%
AAAAGAGAGGGAAGTCTAGA+GGG - chr1_2:49580907-49580926 Msa0074700:intron 40.0%
TTTAGGAGAGAAGTTCTCAC+TGG - chr1_2:49580960-49580979 Msa0074700:intron 40.0%
TGAGCTTAAGAGCTCTACAA+TGG + chr1_2:49581064-49581083 None:intergenic 40.0%
CATGGGCAAGGGAAAAATGA+GGG + chr1_2:49576571-49576590 None:intergenic 45.0%
ACATGGGCAAGGGAAAAATG+AGG + chr1_2:49576572-49576591 None:intergenic 45.0%
! GCGGATTTTAAACATGGGCA+AGG + chr1_2:49576583-49576602 None:intergenic 45.0%
ATCTATTCTCCCTTGGAGGA+TGG - chr1_2:49576842-49576861 Msa0074700:intron 45.0%
GTATGTATTGCCATCCTCCA+AGG + chr1_2:49576855-49576874 None:intergenic 45.0%
CTGAAGCTGCTTGTGAACAA+AGG - chr1_2:49577161-49577180 Msa0074700:CDS 45.0%
CAGCTCTTACAAACATCCCA+AGG + chr1_2:49577475-49577494 None:intergenic 45.0%
AGGAGTTGGGCATGGAAAAA+TGG + chr1_2:49578266-49578285 None:intergenic 45.0%
CAAAGACATCTGCAGGAGTT+GGG + chr1_2:49578279-49578298 None:intergenic 45.0%
ACAAAGACATCTGCAGGAGT+TGG + chr1_2:49578280-49578299 None:intergenic 45.0%
! GCTTGTATCAGAAAGCGTGA+AGG - chr1_2:49578880-49578899 Msa0074700:intron 45.0%
GGCTAAGTAGCAGAGGAAAT+AGG + chr1_2:49579024-49579043 None:intergenic 45.0%
CACTAAACCTCACTTAGTGG+AGG + chr1_2:49579419-49579438 None:intergenic 45.0%
ATAATCGTAGAACCTCCGCA+AGG - chr1_2:49579464-49579483 Msa0074700:CDS 45.0%
GTTCTTGAGCTCCAAGACTA+CGG + chr1_2:49579535-49579554 None:intergenic 45.0%
AGCTCAAGAACCGTGGTATA+TGG - chr1_2:49579544-49579563 Msa0074700:intron 45.0%
CAGAACCGAACCATATACCA+CGG + chr1_2:49579557-49579576 None:intergenic 45.0%
GATGTCAGCTTACTTTCCCA+TGG - chr1_2:49579576-49579595 Msa0074700:intron 45.0%
CTTGTGCTGTGTCTAGATTC+TGG - chr1_2:49580075-49580094 Msa0074700:intron 45.0%
CGTCCAAAGGAGGTAAAAAC+AGG - chr1_2:49580385-49580404 Msa0074700:CDS 45.0%
!!! TGGCCTGTTTTTACCTCCTT+TGG + chr1_2:49580391-49580410 None:intergenic 45.0%
TTAAAGAGAGGGAAGCCTAG+AGG - chr1_2:49580799-49580818 Msa0074700:intron 45.0%
TAAAGAGAGGGAAGCCTAGA+GGG - chr1_2:49580800-49580819 Msa0074700:intron 45.0%
!! GAAAAAAAAATAAAAAATAA+TGG + chr1_2:49577815-49577834 None:intergenic 5.0%
! GATCTGGGGTTGTTCAGTAG+TGG - chr1_2:49576294-49576313 Msa0074700:intron 50.0%
TTGGTAAGCACAACAGCCAC+AGG + chr1_2:49576426-49576445 None:intergenic 50.0%
!! GAAAGTGCTGGAACCATTGG+TGG + chr1_2:49576795-49576814 None:intergenic 50.0%
TGCTGCAGAAGCTGAACTAG+AGG - chr1_2:49577189-49577208 Msa0074700:CDS 50.0%
CAAGGACTTTGTCCTTTGGC+CGG - chr1_2:49577421-49577440 Msa0074700:intron 50.0%
GAGCACAATATACCGGCCAA+AGG + chr1_2:49577436-49577455 None:intergenic 50.0%
! CCACTTGCTGCAACAGATGT+TGG + chr1_2:49578165-49578184 None:intergenic 50.0%
CCAACATCTGTTGCAGCAAG+TGG - chr1_2:49578162-49578181 Msa0074700:CDS 50.0%
CAAGGTCTCACAACCCCAAA+TGG + chr1_2:49578833-49578852 None:intergenic 50.0%
TTCCCACCTGGCAAACTCTA+AGG + chr1_2:49579192-49579211 None:intergenic 50.0%
AGAGTTTGCCAGGTGGGAAT+TGG - chr1_2:49579193-49579212 Msa0074700:intron 50.0%
GGAATTGGCTGATGCTGAGA+AGG - chr1_2:49579208-49579227 Msa0074700:intron 50.0%
AAGCTACCCTCCACTAAGTG+AGG - chr1_2:49579409-49579428 Msa0074700:intron 50.0%
TCGATTACACAACCTTGCGG+AGG + chr1_2:49579479-49579498 None:intergenic 50.0%
!! TAGCGATATTGGTTCGGGCA+TGG - chr1_2:49579504-49579523 Msa0074700:intron 50.0%
! CTTTACTCGTCTAGGACCCT+AGG - chr1_2:49580017-49580036 Msa0074700:intron 50.0%
GAGTTCACGGAAGAAGCTTG+AGG - chr1_2:49580234-49580253 Msa0074700:CDS 50.0%
TGTCTGTTCTGACCGTCCAA+AGG - chr1_2:49580372-49580391 Msa0074700:CDS 50.0%
GGTAGGAGTTATCCAAACCC+TGG - chr1_2:49581011-49581030 Msa0074700:intron 50.0%
TTCCACAGGCAGGACATTTG+CGG + chr1_2:49581369-49581388 None:intergenic 50.0%
CTGTCCAAATGCTGTTCCAC+AGG + chr1_2:49581383-49581402 None:intergenic 50.0%
!! TGAAAAGAAGCACCCGCCTG+TGG - chr1_2:49576407-49576426 Msa0074700:intron 55.0%
TAAGCACAACAGCCACAGGC+GGG + chr1_2:49576422-49576441 None:intergenic 55.0%
GTAAGCACAACAGCCACAGG+CGG + chr1_2:49576423-49576442 None:intergenic 55.0%
AGGAGGTCAGGGACAATCAG+CGG + chr1_2:49576602-49576621 None:intergenic 55.0%
TGTTGCAGCAAGTGGCTGAG+AGG - chr1_2:49578170-49578189 Msa0074700:CDS 55.0%
GTTGCAGCAAGTGGCTGAGA+GGG - chr1_2:49578171-49578190 Msa0074700:CDS 55.0%
ACATCTGCAGGAGTTGGGCA+TGG + chr1_2:49578274-49578293 None:intergenic 55.0%
AGTAGGGGGCTAAGTAGCAG+AGG + chr1_2:49579031-49579050 None:intergenic 55.0%
! CCACCTGGCAAACTCTAAGG+CGG + chr1_2:49579189-49579208 None:intergenic 55.0%
CGCCTTAGAGTTTGCCAGGT+GGG - chr1_2:49579187-49579206 Msa0074700:intron 55.0%
AGCATCAGCCAATTCCCACC+TGG + chr1_2:49579204-49579223 None:intergenic 55.0%
GCATGGATCAGCCGTAGTCT+TGG - chr1_2:49579521-49579540 Msa0074700:intron 55.0%
GTCTTGGAGCTCAAGAACCG+TGG - chr1_2:49579537-49579556 Msa0074700:intron 55.0%
CTGTTCTGACCGTCCAAAGG+AGG - chr1_2:49580375-49580394 Msa0074700:CDS 55.0%
AGGCAGGACATTTGCGGTGA+CGG + chr1_2:49581363-49581382 None:intergenic 55.0%
CCAAATGCTGTTCCACAGGC+AGG + chr1_2:49581379-49581398 None:intergenic 55.0%
CCTGCCTGTGGAACAGCATT+TGG - chr1_2:49581376-49581395 Msa0074700:intron 55.0%
!! CAAACTCTAAGGCGGCTGCG+AGG + chr1_2:49579181-49579200 None:intergenic 60.0%
CAGCCGCCTTAGAGTTTGCC+AGG - chr1_2:49579183-49579202 Msa0074700:intron 60.0%
CCGCCTTAGAGTTTGCCAGG+TGG - chr1_2:49579186-49579205 Msa0074700:intron 60.0%
CACCGCAAATGTCCTGCCTG+TGG - chr1_2:49581364-49581383 Msa0074700:intron 60.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 49575794 49581669 49575794 ID=Msa0074700;Name=Msa0074700
chr1_2 mRNA 49575794 49581669 49575794 ID=Msa0074700-mRNA-1;Parent=Msa0074700;Name=Msa0074700-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|1|0.88|1|0.87|0.77|9|240|379
chr1_2 exon 49575794 49576165 49575794 ID=Msa0074700-mRNA-1:exon:15138;Parent=Msa0074700-mRNA-1
chr1_2 exon 49577067 49577229 49577067 ID=Msa0074700-mRNA-1:exon:15137;Parent=Msa0074700-mRNA-1
chr1_2 exon 49578133 49578335 49578133 ID=Msa0074700-mRNA-1:exon:15136;Parent=Msa0074700-mRNA-1
chr1_2 exon 49578445 49578582 49578445 ID=Msa0074700-mRNA-1:exon:15135;Parent=Msa0074700-mRNA-1
chr1_2 exon 49579253 49579339 49579253 ID=Msa0074700-mRNA-1:exon:15134;Parent=Msa0074700-mRNA-1
chr1_2 exon 49579450 49579522 49579450 ID=Msa0074700-mRNA-1:exon:15133;Parent=Msa0074700-mRNA-1
chr1_2 exon 49580221 49580412 49580221 ID=Msa0074700-mRNA-1:exon:15132;Parent=Msa0074700-mRNA-1
chr1_2 exon 49581177 49581253 49581177 ID=Msa0074700-mRNA-1:exon:15131;Parent=Msa0074700-mRNA-1
chr1_2 exon 49581595 49581669 49581595 ID=Msa0074700-mRNA-1:exon:15130;Parent=Msa0074700-mRNA-1
chr1_2 CDS 49581595 49581669 49581595 ID=Msa0074700-mRNA-1:cds;Parent=Msa0074700-mRNA-1
chr1_2 CDS 49581177 49581253 49581177 ID=Msa0074700-mRNA-1:cds;Parent=Msa0074700-mRNA-1
chr1_2 CDS 49580221 49580412 49580221 ID=Msa0074700-mRNA-1:cds;Parent=Msa0074700-mRNA-1
chr1_2 CDS 49579450 49579522 49579450 ID=Msa0074700-mRNA-1:cds;Parent=Msa0074700-mRNA-1
chr1_2 CDS 49579253 49579339 49579253 ID=Msa0074700-mRNA-1:cds;Parent=Msa0074700-mRNA-1
chr1_2 CDS 49578445 49578582 49578445 ID=Msa0074700-mRNA-1:cds;Parent=Msa0074700-mRNA-1
chr1_2 CDS 49578133 49578335 49578133 ID=Msa0074700-mRNA-1:cds;Parent=Msa0074700-mRNA-1
chr1_2 CDS 49577067 49577229 49577067 ID=Msa0074700-mRNA-1:cds;Parent=Msa0074700-mRNA-1
chr1_2 CDS 49576034 49576165 49576034 ID=Msa0074700-mRNA-1:cds;Parent=Msa0074700-mRNA-1
chr1_2 three_prime_UTR 49575794 49576033 49575794 ID=Msa0074700-mRNA-1:three_prime_utr;Parent=Msa0074700-mRNA-1
Gene Sequence

>Msa0074700

CAGACAAGCGAACTCAAGAGCCTTGCAAACAAATGTGCTGAACAGGTTTTGGAAATGAAGTCTACAAAAGCATTGATTGAAAAGTTACAGGAGGAGAATCGGGAGTTAGAATTTGTTTTGGATATGTATGGCCTAGAAGATTATCAGAAAAGCTTGCCAGAAGTTAGAGAATCTGAAAGGAAAGCTCGCTCTCAAGCTGAAATGCTGAAAAATGCTTTAGATGAACATGGTCTAGAGTTGAGAGTAAGAGCTGCTAATGAAGCTGAAGCTGCTTGTGAACAAAGGCTTGCTGCTGCAGAAGCTGAACTAGAGGAGTTAAGGGCCCAGTTTGATGAAAATGAAAGAAAAAATCTGGAGATGACTGAGGCTATTAAAGTTAAAGAGGCTGAGGCAATAACCTATATATCTGAAATCGAGACTATTGGTCAAGCATATGAAGATATGCAGACACAGCACCAACATCTGTTGCAGCAAGTGGCTGAGAGGGATGACTATAATATCAAGCTTGTATCAGAAAGCGTGAAGGCAAAACAATTACATAGCACTTTACTGTCTGAACAGCAAGCCTTAGCTGATCAACTTCAACAGATTAATTCTTTGATAGAAAATTCAAAGATGAAGATTGTAAATAGTGAAAAACAGATCGAATGCCTTCTATCAGAAGCCGCTAAATGTACTCAAGATGAAAAACACCTCGCAGCCGCCTTAGAGTTTGCCAGGTGGGAATTGGCTGATGCTGAGAAGGAGTTGAAGTTGCTCAAGTCTGTTGCTTCAGCTTCAGAGAAAGAGTACGACCAAATTCAGAAAGATGTGGAAGCTTGTGAAAAGGAATTGGACAGTGAAAGGAGTTCACGGAAGAAGCTTGAGGAAGAACTAATGCAAGTGAACAACCAAATTGCTGAGCTGAATTCTGAAGGCAGAAAAACTGCAGTACAACAACTTGAAGAAGAAATAAGAGTTTGTAAGAACATGATCAAGTGTACTGTCTGTTCTGACCGTCCAAAGGAGGTTGTGATTGTGAAGTGCTATCATCTGTTCTGCAATCCATGTATACAAAGAAATCTTGAACTCCGTCACCGCAAATGTCCTGCCTGTGGAACAGCATTTGGACAGAGCGATGTTCGTTTTGTTAAAATATGA

Protein sequence

>Msa0074700

QTSELKSLANKCAEQVLEMKSTKALIEKLQEENRELEFVLDMYGLEDYQKSLPEVRESERKARSQAEMLKNALDEHGLELRVRAANEAEAACEQRLAAAEAELEELRAQFDENERKNLEMTEAIKVKEAEAITYISEIETIGQAYEDMQTQHQHLLQQVAERDDYNIKLVSESVKAKQLHSTLLSEQQALADQLQQINSLIENSKMKIVNSEKQIECLLSEAAKCTQDEKHLAAALEFARWELADAEKELKLLKSVASASEKEYDQIQKDVEACEKELDSERSSRKKLEEELMQVNNQIAELNSEGRKTAVQQLEEEIRVCKNMIKCTVCSDRPKEVVIVKCYHLFCNPCIQRNLELRHRKCPACGTAFGQSDVRFVKI*