Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0500630 | XP_003603031.1 | 91.786 | 840 | 59 | 4 | 1 | 837 | 1 | 833 | 0.0 | 1554 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0500630 | sp|Q9FMN2|PAH2_ARATH | 70.820 | 305 | 76 | 2 | 531 | 835 | 638 | 929 | 1.59e-149 | 466 |
| Msa0500630 | sp|Q9FMN2|PAH2_ARATH | 48.319 | 238 | 87 | 7 | 1 | 215 | 1 | 225 | 4.59e-49 | 191 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0500630 | G7J6C5 | 91.786 | 840 | 59 | 4 | 1 | 837 | 1 | 833 | 0.0 | 1554 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0174100 | Msa0500630 | 0.812418 | 4.282388e-51 | -8.615850e-47 |
| Msa0433790 | Msa0500630 | 0.978875 | 9.479937e-147 | -8.615850e-47 |
| Msa0355550 | Msa0500630 | 0.801020 | 1.096394e-48 | -8.615850e-47 |
| Msa0497120 | Msa0500630 | 0.816662 | 4.926047e-52 | -8.615850e-47 |
| Msa0500630 | Msa0500670 | 0.936438 | 1.737232e-97 | -8.615850e-47 |
| Msa0500630 | Msa1041720 | 0.801876 | 7.320942e-49 | -8.615850e-47 |
| Msa0500630 | Msa1074210 | 0.810753 | 9.855585e-51 | -8.615850e-47 |
| Msa0500630 | Msa1126320 | -0.809107 | 2.228485e-50 | -8.615850e-47 |
| Msa0500630 | Msa1133690 | 0.836437 | 9.362527e-57 | -8.615850e-47 |
| Msa0500630 | Msa1137210 | 0.821750 | 3.419761e-53 | -8.615850e-47 |
| Msa0500630 | Msa1159160 | 0.825075 | 5.711106e-54 | -8.615850e-47 |
| Msa0500630 | Msa1162870 | 0.804329 | 2.275854e-49 | -8.615850e-47 |
| Msa0500630 | Msa1168050 | -0.805016 | 1.636156e-49 | -8.615850e-47 |
| Msa0500630 | Msa1424970 | 0.806975 | 6.336186e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0500630 | MtrunA17_Chr3g0133821 | 91.786 | 840 | 59 | 4 | 1 | 837 | 1 | 833 | 0.0 | 1554 |
| Msa0500630 | MtrunA17_Chr1g0153651 | 82.661 | 248 | 42 | 1 | 585 | 831 | 268 | 515 | 8.74e-145 | 437 |
| Msa0500630 | MtrunA17_Chr1g0153651 | 44.255 | 235 | 110 | 8 | 1 | 223 | 1 | 226 | 2.40e-42 | 162 |
| Msa0500630 | MtrunA17_Chr7g0263401 | 68.167 | 311 | 86 | 3 | 527 | 831 | 559 | 862 | 3.39e-142 | 442 |
| Msa0500630 | MtrunA17_Chr7g0263401 | 59.375 | 128 | 42 | 3 | 1 | 127 | 1 | 119 | 8.00e-40 | 158 |
| Msa0500630 | MtrunA17_Chr1g0181991 | 66.776 | 304 | 99 | 1 | 528 | 831 | 619 | 920 | 2.39e-139 | 436 |
| Msa0500630 | MtrunA17_Chr1g0181991 | 67.000 | 100 | 33 | 0 | 1 | 100 | 1 | 100 | 1.06e-39 | 158 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0500630 | AT5G42870.1 | 70.820 | 305 | 76 | 2 | 531 | 835 | 638 | 929 | 1.62e-150 | 466 |
| Msa0500630 | AT5G42870.1 | 48.319 | 238 | 87 | 7 | 1 | 215 | 1 | 225 | 4.67e-50 | 191 |
| Msa0500630 | AT5G42870.2 | 69.836 | 305 | 74 | 3 | 531 | 835 | 638 | 924 | 1.19e-145 | 453 |
| Msa0500630 | AT5G42870.2 | 48.319 | 238 | 87 | 7 | 1 | 215 | 1 | 225 | 4.43e-50 | 191 |
| Msa0500630 | AT3G09560.3 | 62.874 | 334 | 99 | 5 | 512 | 831 | 577 | 899 | 8.51e-137 | 429 |
| Msa0500630 | AT3G09560.3 | 75.000 | 92 | 23 | 0 | 1 | 92 | 1 | 92 | 2.91e-40 | 160 |
| Msa0500630 | AT3G09560.1 | 62.874 | 334 | 99 | 5 | 512 | 831 | 577 | 899 | 8.51e-137 | 429 |
| Msa0500630 | AT3G09560.1 | 75.000 | 92 | 23 | 0 | 1 | 92 | 1 | 92 | 2.91e-40 | 160 |
| Msa0500630 | AT3G09560.2 | 62.874 | 334 | 99 | 5 | 512 | 831 | 577 | 899 | 8.51e-137 | 429 |
| Msa0500630 | AT3G09560.2 | 75.000 | 92 | 23 | 0 | 1 | 92 | 1 | 92 | 2.91e-40 | 160 |
| Msa0500630 | AT3G09560.4 | 62.874 | 334 | 99 | 5 | 512 | 831 | 577 | 899 | 8.51e-137 | 429 |
| Msa0500630 | AT3G09560.4 | 75.000 | 92 | 23 | 0 | 1 | 92 | 1 | 92 | 2.91e-40 | 160 |
| Msa0500630 | AT5G42870.3 | 70.385 | 260 | 64 | 2 | 531 | 790 | 638 | 884 | 7.16e-121 | 387 |
| Msa0500630 | AT5G42870.3 | 48.319 | 238 | 87 | 7 | 1 | 215 | 1 | 225 | 4.75e-50 | 190 |
Find 245 sgRNAs with CRISPR-Local
Find 512 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGGTTGTGTTGTTCTTTC+TGG | 0.003981 | 3_4:+41134645 | None:intergenic |
| CTTTATAGCCTCAACATTAT+TGG | 0.130135 | 3_4:-41134538 | Msa0500630:five_prime_UTR |
| AAATTGTTAGTTTGAGATTT+TGG | 0.141100 | 3_4:+41132654 | None:intergenic |
| CCTTGACTGCGGAGAATAAA+TGG | 0.155534 | 3_4:+41130173 | None:intergenic |
| TCGAAAATCATATCATAATT+TGG | 0.156724 | 3_4:-41127568 | Msa0500630:three_prime_UTR |
| ATATAACTATATGTCTTAAT+TGG | 0.194123 | 3_4:+41134490 | None:intergenic |
| CGAATACTTGGTCTTATGTT+TGG | 0.225017 | 3_4:-41133998 | Msa0500630:CDS |
| TCTTCTTTATCTATATATTC+AGG | 0.244090 | 3_4:+41132357 | None:intergenic |
| AAAATCTCAAACTAACAATT+TGG | 0.253796 | 3_4:-41132652 | Msa0500630:CDS |
| AATAACCTTGGTCCTGGATA+TGG | 0.267858 | 3_4:-41127865 | Msa0500630:three_prime_UTR |
| TTTCGTCAAGGTCACTAAAA+AGG | 0.268524 | 3_4:+41132415 | None:intergenic |
| TTATTACCAGAAGAAATATT+TGG | 0.281868 | 3_4:+41132222 | None:intergenic |
| CCCGCAGCATCCTCATTTCT+AGG | 0.284851 | 3_4:+41132273 | None:intergenic |
| GAGTCCAGTGATTGACTTAA+AGG | 0.287905 | 3_4:+41132174 | None:intergenic |
| TGAGGTGGTGGGAGGGAGAC+AGG | 0.288958 | 3_4:+41134605 | None:intergenic |
| CTCAAATATATCTGTGGAAA+TGG | 0.299611 | 3_4:-41130965 | Msa0500630:CDS |
| ATGCAAGCGGTGGGGAGATT+AGG | 0.300952 | 3_4:-41134406 | Msa0500630:CDS |
| CTCATTTCTAGGGATAACTA+TGG | 0.305863 | 3_4:+41132284 | None:intergenic |
| ATCCAGGACCAAGGTTATTC+AGG | 0.310812 | 3_4:+41127869 | None:intergenic |
| CCTTTCTCCTTGAGCAGATC+AGG | 0.311428 | 3_4:-41131356 | Msa0500630:CDS |
| TGTCATGGTGGTGCATATTT+TGG | 0.311441 | 3_4:-41127682 | Msa0500630:three_prime_UTR |
| AATCCGTTCTATGCTGGTTT+TGG | 0.317235 | 3_4:-41128499 | Msa0500630:CDS |
| AAGAAGACATGTAAACTTCT+TGG | 0.317624 | 3_4:+41127424 | None:intergenic |
| TGAAAGAGCCTGATGACTTT+TGG | 0.319334 | 3_4:-41127892 | Msa0500630:three_prime_UTR |
| CTTGGGATTCCATATGGCTT+TGG | 0.321940 | 3_4:+41127442 | None:intergenic |
| GAATACTTGGTCTTATGTTT+GGG | 0.323830 | 3_4:-41133997 | Msa0500630:CDS |
| CTGGTGGAAACTGGAGAATT+TGG | 0.328889 | 3_4:-41131379 | Msa0500630:CDS |
| TCCTTGCCAAATATTTCTTC+TGG | 0.329362 | 3_4:-41132228 | Msa0500630:CDS |
| GAGGTTGTGTTGTTCTTTCT+GGG | 0.333901 | 3_4:+41134646 | None:intergenic |
| TTCAGAATCTTGATAAGCTT+TGG | 0.339252 | 3_4:+41132068 | None:intergenic |
| TCACTGGACTCGGCATTTCC+TGG | 0.342801 | 3_4:-41132162 | Msa0500630:CDS |
| TGCTCAGAAGTGCTTGTTGC+GGG | 0.342914 | 3_4:+41128235 | None:intergenic |
| GTCATCCTGGCTGTTGTAAC+TGG | 0.344362 | 3_4:+41132575 | None:intergenic |
| CCATATGGCTTTGGTGGTCA+TGG | 0.352455 | 3_4:+41127451 | None:intergenic |
| TGCGTAATATTTCTTTATGC+TGG | 0.355384 | 3_4:+41127295 | None:intergenic |
| ACTCTTCATCTGGTGGAAAC+TGG | 0.364263 | 3_4:-41131388 | Msa0500630:CDS |
| CCAACGGGATTCCAACCTTA+AGG | 0.364577 | 3_4:+41128449 | None:intergenic |
| TGCAAGCGGTGGGGAGATTA+GGG | 0.368694 | 3_4:-41134405 | Msa0500630:CDS |
| ATTCAAAATTGCATGCTTAG+AGG | 0.375535 | 3_4:-41129221 | Msa0500630:intron |
| TGTTATTATCACATAATTCT+CGG | 0.384405 | 3_4:+41132553 | None:intergenic |
| TGCCTTTGGTTGGTGTTGAC+TGG | 0.386172 | 3_4:-41130213 | Msa0500630:CDS |
| TAGGAATTGTCGTGTAATAT+AGG | 0.389831 | 3_4:+41129746 | None:intergenic |
| GGTCTTTGAGTTTCATTCTC+AGG | 0.392056 | 3_4:-41132742 | Msa0500630:CDS |
| ATTTAGTGGAAAAGAAGGTT+AGG | 0.392157 | 3_4:-41131223 | Msa0500630:CDS |
| AATAAGATTTATTGCCTTCA+CGG | 0.393930 | 3_4:+41129535 | None:intergenic |
| TGATGAAATCAGTTACCTTA+AGG | 0.397156 | 3_4:-41128464 | Msa0500630:CDS |
| CAAGGCGTATACACCGTTTC+CGG | 0.397395 | 3_4:-41134370 | Msa0500630:CDS |
| TCTTGGCCAGTTCATGCCTT+TGG | 0.397799 | 3_4:-41130227 | Msa0500630:CDS |
| ATTCAACGATGCTATCTGTT+TGG | 0.400868 | 3_4:+41131184 | None:intergenic |
| TCTAAGCGTTCGCGAATACT+TGG | 0.403981 | 3_4:-41134010 | Msa0500630:CDS |
| GGAGAGAAGTTCTTTCTTTG+AGG | 0.406699 | 3_4:+41134627 | None:intergenic |
| TCCGGTCCCTTTCATCCATT+CGG | 0.407707 | 3_4:-41134352 | Msa0500630:CDS |
| TCCGAGGATGGGAAGATTGT+AGG | 0.408097 | 3_4:-41134043 | Msa0500630:CDS |
| GGAAGCATTGGTAACACAAT+AGG | 0.408443 | 3_4:+41132596 | None:intergenic |
| GATAATATTTCTTATGAGAA+TGG | 0.410235 | 3_4:-41132336 | Msa0500630:CDS |
| CAAACTAACAATTTGGATAT+AGG | 0.410575 | 3_4:-41132645 | Msa0500630:CDS |
| AAACTTCTTGGGATTCCATA+TGG | 0.413481 | 3_4:+41127436 | None:intergenic |
| TGATACTAAACCCAATTTAG+TGG | 0.415153 | 3_4:-41131237 | Msa0500630:CDS |
| TCCTACAGGTCAGATGTTCT+TGG | 0.416257 | 3_4:-41130244 | Msa0500630:intron |
| TATCTTGCTCATGGGGAAAC+TGG | 0.417204 | 3_4:-41133704 | Msa0500630:CDS |
| AGAAGACATGTAAACTTCTT+GGG | 0.420245 | 3_4:+41127425 | None:intergenic |
| ATTCCTACTGAATCTTAAAC+AGG | 0.423793 | 3_4:-41129730 | Msa0500630:intron |
| CTTGCATTCACTCGTATCTC+AGG | 0.425477 | 3_4:-41133657 | Msa0500630:intron |
| GGGATTCCATATGGCTTTGG+TGG | 0.425560 | 3_4:+41127445 | None:intergenic |
| ACTATATGTCTTAATTGGAT+TGG | 0.425855 | 3_4:+41134495 | None:intergenic |
| CGCAACAAGCACTTCTGAGC+AGG | 0.427789 | 3_4:-41128233 | Msa0500630:intron |
| ATATTGATCATCAATCTTTG+AGG | 0.435136 | 3_4:-41134087 | Msa0500630:CDS |
| TGCAGCTCTTAAAAGAATAT+AGG | 0.437487 | 3_4:-41127828 | Msa0500630:intron |
| CTTCTTTATCTATATATTCA+GGG | 0.438364 | 3_4:+41132358 | None:intergenic |
| TCTATGCATGCACTCGTGAA+TGG | 0.445811 | 3_4:-41128265 | Msa0500630:CDS |
| ACCCAATTTAGTGGAAAAGA+AGG | 0.452231 | 3_4:-41131228 | Msa0500630:CDS |
| CTCATCTCTTAGCATCAAAC+AGG | 0.454238 | 3_4:+41127504 | None:intergenic |
| CATATGGCTTTGGTGGTCAT+GGG | 0.455131 | 3_4:+41127452 | None:intergenic |
| ATTTCTCATTTGCAGGAGAA+TGG | 0.456087 | 3_4:-41129810 | Msa0500630:intron |
| AAAGGAGTGGGACTTAACTA+TGG | 0.458332 | 3_4:+41127384 | None:intergenic |
| GATTGCAATCCGTTCTATGC+TGG | 0.458935 | 3_4:-41128505 | Msa0500630:CDS |
| TTTGAAATTAATTGAGGTGG+TGG | 0.460080 | 3_4:+41134593 | None:intergenic |
| AGAAGAGGTTTCTGTGGTAG+AGG | 0.460405 | 3_4:-41133795 | Msa0500630:CDS |
| GATGCTATCTGTTTGGAAGT+TGG | 0.460709 | 3_4:+41131191 | None:intergenic |
| TCACCATGGTACGTTCGGTT+TGG | 0.460726 | 3_4:-41134277 | Msa0500630:CDS |
| TCATATCATAATTTGGTGGA+TGG | 0.461185 | 3_4:-41127561 | Msa0500630:three_prime_UTR |
| AATCATCACCATGGTACGTT+CGG | 0.462335 | 3_4:-41134282 | Msa0500630:CDS |
| CGAATTTGTTGGATATTAAG+TGG | 0.463895 | 3_4:-41133910 | Msa0500630:CDS |
| CACATAATTCTCGGTCATCC+TGG | 0.465222 | 3_4:+41132562 | None:intergenic |
| TGGATGAAAGGGACCGGAAA+CGG | 0.465333 | 3_4:+41134357 | None:intergenic |
| TCAAATATCAAATGCAGAAG+GGG | 0.466952 | 3_4:+41127912 | None:intergenic |
| CACCAACCAAAGGCATGAAC+TGG | 0.468960 | 3_4:+41130221 | None:intergenic |
| GGCCTGAATAACCTTGGTCC+TGG | 0.471719 | 3_4:-41127871 | Msa0500630:three_prime_UTR |
| TCAACAAGCAACTCTTCATC+TGG | 0.473273 | 3_4:-41131398 | Msa0500630:CDS |
| TGAGATTGCCGCGAATTTGT+TGG | 0.477774 | 3_4:-41133921 | Msa0500630:CDS |
| AGCATAGAACGGATTGCAAT+CGG | 0.479526 | 3_4:+41128507 | None:intergenic |
| GGGGAAGTTGGGCAGCATAC+AGG | 0.479739 | 3_4:-41132252 | Msa0500630:CDS |
| GAAATCAGTTACCTTAAGGT+TGG | 0.483544 | 3_4:-41128460 | Msa0500630:CDS |
| TTTATACCAGCTTTCTTACC+AGG | 0.484276 | 3_4:+41132015 | None:intergenic |
| AGAAGCGTGAAGCAAGGAGA+AGG | 0.487595 | 3_4:-41134753 | None:intergenic |
| TCTGTGCAAATCTTATTCTC+TGG | 0.489728 | 3_4:+41131272 | None:intergenic |
| CTTAAGGTTGGAATCCCGTT+GGG | 0.490494 | 3_4:-41128448 | Msa0500630:CDS |
| TGTGGTAGAGGGTGTTGAAG+AGG | 0.492596 | 3_4:-41133783 | Msa0500630:CDS |
| CCATGACCACCAAAGCCATA+TGG | 0.494090 | 3_4:-41127451 | Msa0500630:three_prime_UTR |
| GAGGTGGTGGGAGGGAGACA+GGG | 0.495633 | 3_4:+41134606 | None:intergenic |
| GTAAAATTTGAAATTAATTG+AGG | 0.496933 | 3_4:+41134587 | None:intergenic |
| AAATCTTCATTATAAATCCC+AGG | 0.498505 | 3_4:-41128423 | Msa0500630:CDS |
| TTTAGTGGAAAAGAAGGTTA+GGG | 0.499551 | 3_4:-41131222 | Msa0500630:CDS |
| GGGAAGAAAGATTGATCAAA+CGG | 0.499589 | 3_4:-41134732 | Msa0500630:five_prime_UTR |
| CCCTACAATCTTCCCATCCT+CGG | 0.499678 | 3_4:+41134042 | None:intergenic |
| GAGAATGAGGATGGTTCTAT+TGG | 0.500784 | 3_4:-41133851 | Msa0500630:CDS |
| TGGTTCTATTGGTGTTGTAA+AGG | 0.501741 | 3_4:-41133840 | Msa0500630:CDS |
| GGCCAGTTCATGCCTTTGGT+TGG | 0.502823 | 3_4:-41130223 | Msa0500630:CDS |
| CACGGTTACTCTTTAATCAA+AGG | 0.503950 | 3_4:+41127711 | None:intergenic |
| TATTCAGGCCAAAAGTCATC+AGG | 0.504957 | 3_4:+41127884 | None:intergenic |
| GCAGCAATTGAGTGTAGAAG+AGG | 0.505454 | 3_4:-41133810 | Msa0500630:CDS |
| TTGGTCTTATGTTTGGGAGA+AGG | 0.506799 | 3_4:-41133991 | Msa0500630:CDS |
| CTTGACTGCGGAGAATAAAT+GGG | 0.506888 | 3_4:+41130174 | None:intergenic |
| TTCAAATATCAAATGCAGAA+GGG | 0.508191 | 3_4:+41127911 | None:intergenic |
| GTTCGGTTTGGTAAATTCCA+AGG | 0.508413 | 3_4:-41134265 | Msa0500630:CDS |
| CATATCATAATTTGGTGGAT+GGG | 0.508503 | 3_4:-41127560 | Msa0500630:three_prime_UTR |
| TCAACTCCACCACACTCTCT+TGG | 0.509203 | 3_4:-41132501 | Msa0500630:CDS |
| GAGGTTATGTATCTTGCTCA+TGG | 0.509583 | 3_4:-41133713 | Msa0500630:CDS |
| TTTAAGTCAATCACTGGACT+CGG | 0.512647 | 3_4:-41132172 | Msa0500630:CDS |
| CCGAGGATGGGAAGATTGTA+GGG | 0.513816 | 3_4:-41134042 | Msa0500630:CDS |
| AAATCATTCCACAACAGAAA+AGG | 0.514829 | 3_4:+41127592 | None:intergenic |
| GGCGCCACCGAATGGATGAA+AGG | 0.515421 | 3_4:+41134345 | None:intergenic |
| CCTGATCTGCTCAAGGAGAA+AGG | 0.515753 | 3_4:+41131356 | None:intergenic |
| GAAATAACAACAGGACCCTC+TGG | 0.516526 | 3_4:+41129585 | None:intergenic |
| TGTTGTTCTTTCTGGGACGA+TGG | 0.518609 | 3_4:+41134653 | None:intergenic |
| TGGTGATCATGCTGTGGTAG+TGG | 0.519796 | 3_4:-41133873 | Msa0500630:CDS |
| GTGAATTTGAAGATGGTGTT+GGG | 0.520050 | 3_4:-41133958 | Msa0500630:CDS |
| TTTGATGCTAAGAGATGAGC+AGG | 0.520197 | 3_4:-41127500 | Msa0500630:three_prime_UTR |
| CACTAAGAATGCTGATGTAG+TGG | 0.520432 | 3_4:-41132766 | Msa0500630:CDS |
| GTGGTAGAGGGTGTTGAAGA+GGG | 0.522900 | 3_4:-41133782 | Msa0500630:CDS |
| GAAGAGGTTTCTGTGGTAGA+GGG | 0.525056 | 3_4:-41133794 | Msa0500630:CDS |
| TCTTCCACATTGTACATACT+AGG | 0.528135 | 3_4:+41132699 | None:intergenic |
| AAAGCAGTTACTGCATGAGC+AGG | 0.529161 | 3_4:-41132097 | Msa0500630:CDS |
| GAAGCGTGAAGCAAGGAGAA+GGG | 0.530954 | 3_4:-41134752 | Msa0500630:five_prime_UTR |
| GCGCCACCGAATGGATGAAA+GGG | 0.531603 | 3_4:+41134346 | None:intergenic |
| ATTCTCTTCGTCTGAACTCG+AGG | 0.531939 | 3_4:+41132440 | None:intergenic |
| CTTAATATCCAACAAATTCG+CGG | 0.532615 | 3_4:+41133913 | None:intergenic |
| CCTAGAAATGAGGATGCTGC+GGG | 0.534545 | 3_4:-41132273 | Msa0500630:CDS |
| GGTGTTGACTGGTCACAGAC+TGG | 0.535668 | 3_4:-41130202 | Msa0500630:CDS |
| GCCTGCACCTATCCATATCC+AGG | 0.536070 | 3_4:+41127853 | None:intergenic |
| CCTTAAGGTTGGAATCCCGT+TGG | 0.536129 | 3_4:-41128449 | Msa0500630:CDS |
| AGCTATGCTGGGGAAACAGC+AGG | 0.537208 | 3_4:-41131120 | Msa0500630:intron |
| CCCTAGAAATGAGGATGCTG+CGG | 0.537736 | 3_4:-41132274 | Msa0500630:CDS |
| ATATCGACGGCGCCACCGAA+TGG | 0.539480 | 3_4:+41134337 | None:intergenic |
| AGGTTATGTATCTTGCTCAT+GGG | 0.540031 | 3_4:-41133712 | Msa0500630:CDS |
| CCGCAGCATCCTCATTTCTA+GGG | 0.541811 | 3_4:+41132274 | None:intergenic |
| GAATGATCGTATCGTGATCT+CGG | 0.542030 | 3_4:-41130943 | Msa0500630:CDS |
| TTCTTTATCTATATATTCAG+GGG | 0.545200 | 3_4:+41132359 | None:intergenic |
| TGCTTCCAGTTACAACAGCC+AGG | 0.546268 | 3_4:-41132580 | Msa0500630:CDS |
| GAAGGAAGAAGCGTGAAGCA+AGG | 0.547353 | 3_4:-41134759 | None:intergenic |
| ACCAGAAGAAATATTTGGCA+AGG | 0.547394 | 3_4:+41132227 | None:intergenic |
| GGTGAATTTGAAGATGGTGT+TGG | 0.551028 | 3_4:-41133959 | Msa0500630:CDS |
| CATAGTTATCCCTAGAAATG+AGG | 0.553207 | 3_4:-41132283 | Msa0500630:CDS |
| TTTCAAATATCAAATGCAGA+AGG | 0.555472 | 3_4:+41127910 | None:intergenic |
| TTGGCATCATTTGGAATAGG+TGG | 0.556234 | 3_4:+41131317 | None:intergenic |
| AAATTAATTGAGGTGGTGGG+AGG | 0.558544 | 3_4:+41134597 | None:intergenic |
| AATTAATTGAGGTGGTGGGA+GGG | 0.560641 | 3_4:+41134598 | None:intergenic |
| TTATACCAGCTTTCTTACCA+GGG | 0.560692 | 3_4:+41132016 | None:intergenic |
| ACCGAATGGATGAAAGGGAC+CGG | 0.561783 | 3_4:+41134351 | None:intergenic |
| AACAGAGTAATTAATTAGTG+AGG | 0.562259 | 3_4:-41134429 | Msa0500630:five_prime_UTR |
| ATCGTGATCTCGGATGTGGA+TGG | 0.562787 | 3_4:-41130933 | Msa0500630:CDS |
| CCATTTATTCTCCGCAGTCA+AGG | 0.563293 | 3_4:-41130173 | Msa0500630:intron |
| TTGAAATTAATTGAGGTGGT+GGG | 0.563440 | 3_4:+41134594 | None:intergenic |
| GATCTCCTTGATGTTTCACT+AGG | 0.569676 | 3_4:+41132468 | None:intergenic |
| CCTTGGTCCTGGATATGGAT+AGG | 0.571153 | 3_4:-41127860 | Msa0500630:three_prime_UTR |
| TTGCCTTCACGGTATAGAGA+GGG | 0.572218 | 3_4:+41129546 | None:intergenic |
| TATACAATTATACATTCGAA+TGG | 0.572937 | 3_4:+41127361 | None:intergenic |
| TCTTCGTCTGAACTCGAGGA+CGG | 0.573184 | 3_4:+41132444 | None:intergenic |
| TTCTGTATTACAAGTGTGCA+TGG | 0.575640 | 3_4:-41127654 | Msa0500630:three_prime_UTR |
| TCCTGGATATGGATAGGTGC+AGG | 0.577816 | 3_4:-41127854 | Msa0500630:three_prime_UTR |
| GTTTACCTAGTGAAACATCA+AGG | 0.578560 | 3_4:-41132473 | Msa0500630:CDS |
| GAGTGTAGAAGAGGTTTCTG+TGG | 0.580182 | 3_4:-41133801 | Msa0500630:CDS |
| TTTCCAAAACCAGCATAGAA+CGG | 0.585939 | 3_4:+41128496 | None:intergenic |
| ACAAGCAACTCTTCATCTGG+TGG | 0.588423 | 3_4:-41131395 | Msa0500630:CDS |
| GGTCCCTTTCATCCATTCGG+TGG | 0.589130 | 3_4:-41134349 | Msa0500630:CDS |
| GTGAGTGGTGAATTTGAAGA+TGG | 0.589262 | 3_4:-41133965 | Msa0500630:CDS |
| ATTAGTGAGGATGCAAGCGG+TGG | 0.593519 | 3_4:-41134416 | Msa0500630:exon |
| TCGTATCGTGATCTCGGATG+TGG | 0.593644 | 3_4:-41130937 | Msa0500630:CDS |
| TCACCTGTTTAAGATTCAGT+AGG | 0.597998 | 3_4:+41129727 | None:intergenic |
| TTTCCCTCTCTATACCGTGA+AGG | 0.598398 | 3_4:-41129549 | Msa0500630:intron |
| CAAATGTATCTTGATAACAA+AGG | 0.598518 | 3_4:-41134181 | Msa0500630:CDS |
| CGTTGAATCTGAAGCAAGGG+AGG | 0.599581 | 3_4:-41131169 | Msa0500630:CDS |
| GCTGTTGTAACTGGAAGCAT+TGG | 0.599948 | 3_4:+41132584 | None:intergenic |
| TGCTCATGGGGAAACTGGTG+AGG | 0.600662 | 3_4:-41133699 | Msa0500630:CDS |
| AAATTTGAAATTAATTGAGG+TGG | 0.602999 | 3_4:+41134590 | None:intergenic |
| AATTATACATTCGAATGGAA+AGG | 0.603129 | 3_4:+41127366 | None:intergenic |
| TCTAGATCCTGATCTGCTCA+AGG | 0.603927 | 3_4:+41131349 | None:intergenic |
| TTACCAAACCGAACGTACCA+TGG | 0.604008 | 3_4:+41134274 | None:intergenic |
| TCATTTCTAGGGATAACTAT+GGG | 0.607928 | 3_4:+41132285 | None:intergenic |
| CCTTCAGGGTACGGAAACTG+AGG | 0.609730 | 3_4:-41132793 | Msa0500630:intron |
| TGCTGTGGTAGTGGAGAATG+AGG | 0.610182 | 3_4:-41133864 | Msa0500630:CDS |
| CATCGTTGAATCTGAAGCAA+GGG | 0.610649 | 3_4:-41131172 | Msa0500630:CDS |
| AATCTTCATTATAAATCCCA+GGG | 0.611431 | 3_4:-41128422 | Msa0500630:intron |
| ATTGCCTTCACGGTATAGAG+AGG | 0.614030 | 3_4:+41129545 | None:intergenic |
| ATACGAGTGAATGCAAGACT+TGG | 0.615146 | 3_4:+41133663 | None:intergenic |
| AAGTGGTCTACGAATCAAGA+TGG | 0.615279 | 3_4:-41133893 | Msa0500630:CDS |
| TACATTCGAATGGAAAGGAG+TGG | 0.616393 | 3_4:+41127371 | None:intergenic |
| CAGAATGAATGATCGATACG+AGG | 0.617552 | 3_4:-41132391 | Msa0500630:CDS |
| GCATCGTTGAATCTGAAGCA+AGG | 0.617570 | 3_4:-41131173 | Msa0500630:CDS |
| TTAGTGAGGATGCAAGCGGT+GGG | 0.618684 | 3_4:-41134415 | Msa0500630:exon |
| TAGAAATGAGGATGCTGCGG+GGG | 0.620903 | 3_4:-41132271 | Msa0500630:CDS |
| CTGCTCAGAAGTGCTTGTTG+CGG | 0.621225 | 3_4:+41128234 | None:intergenic |
| TAAGAATGCTGATGTAGTGG+AGG | 0.623360 | 3_4:-41132763 | Msa0500630:CDS |
| CAGTTACTGCATGAGCAGGA+AGG | 0.623575 | 3_4:-41132093 | Msa0500630:CDS |
| GTGAATGCAAGACTTGGTCA+TGG | 0.624514 | 3_4:+41133669 | None:intergenic |
| ACCACCATGACACGATCACA+CGG | 0.625277 | 3_4:+41127693 | None:intergenic |
| GCTCAGAAGTGCTTGTTGCG+GGG | 0.625841 | 3_4:+41128236 | None:intergenic |
| GGTTATGTATCTTGCTCATG+GGG | 0.626196 | 3_4:-41133711 | Msa0500630:CDS |
| ACATTCGAATGGAAAGGAGT+GGG | 0.626497 | 3_4:+41127372 | None:intergenic |
| AAAATCATATCATAATTTGG+TGG | 0.627772 | 3_4:-41127565 | Msa0500630:three_prime_UTR |
| TTAAAGGAAAACGAACGTGT+TGG | 0.629150 | 3_4:+41132190 | None:intergenic |
| TGAATATTCCAATAATGTTG+AGG | 0.629592 | 3_4:+41134530 | None:intergenic |
| ATATCATCAACAGATTCTAA+CGG | 0.633327 | 3_4:+41134106 | None:intergenic |
| GTACAATGTGGAAGATGTTG+AGG | 0.633807 | 3_4:-41132691 | Msa0500630:CDS |
| TTAGGGAGCTACATTAGTCA+AGG | 0.635109 | 3_4:-41134388 | Msa0500630:CDS |
| TTGATGCTCAAATATATCTG+TGG | 0.635548 | 3_4:-41130971 | Msa0500630:CDS |
| TATACCAGCTTTCTTACCAG+GGG | 0.647874 | 3_4:+41132017 | None:intergenic |
| AAACAATCACCAAGAGAGTG+TGG | 0.649865 | 3_4:+41132492 | None:intergenic |
| TAGAACGGATTGCAATCGGA+AGG | 0.650304 | 3_4:+41128511 | None:intergenic |
| AGAATGAATGATCGATACGA+GGG | 0.652534 | 3_4:-41132390 | Msa0500630:CDS |
| CAAATATCAAATGCAGAAGG+GGG | 0.653360 | 3_4:+41127913 | None:intergenic |
| CTCAAGTGAGCAAACTCATG+AGG | 0.654134 | 3_4:-41133732 | Msa0500630:CDS |
| GAGAAGAACAAGAGTTACGT+GGG | 0.655513 | 3_4:+41134675 | None:intergenic |
| ATACCAGCTTTCTTACCAGG+GGG | 0.659405 | 3_4:+41132018 | None:intergenic |
| GTGGTAGTGGAGAATGAGGA+TGG | 0.670297 | 3_4:-41133860 | Msa0500630:CDS |
| GACCAGTCAACACCAACCAA+AGG | 0.670738 | 3_4:+41130211 | None:intergenic |
| TTGAACGACGACGATATCGA+CGG | 0.672004 | 3_4:+41134324 | None:intergenic |
| TACCAGCTTTCTTACCAGGG+GGG | 0.681108 | 3_4:+41132019 | None:intergenic |
| TGAGCCTAGTATGTACAATG+TGG | 0.685162 | 3_4:-41132703 | Msa0500630:CDS |
| GGAGAAGAACAAGAGTTACG+TGG | 0.686098 | 3_4:+41134674 | None:intergenic |
| CTTCAGGGTACGGAAACTGA+GGG | 0.690661 | 3_4:-41132792 | Msa0500630:intron |
| GTTCATTCAAATCATCACCA+TGG | 0.692552 | 3_4:-41134291 | Msa0500630:CDS |
| CAATCACCAAGAGAGTGTGG+TGG | 0.694828 | 3_4:+41132495 | None:intergenic |
| CCTATCCATATCCAGGACCA+AGG | 0.695817 | 3_4:+41127860 | None:intergenic |
| TTTGGGAGAAGGTCTGTGAG+TGG | 0.698399 | 3_4:-41133980 | Msa0500630:CDS |
| TTAATTAGTGAGGATGCAAG+CGG | 0.704007 | 3_4:-41134419 | Msa0500630:exon |
| CTAGAAATGAGGATGCTGCG+GGG | 0.704073 | 3_4:-41132272 | Msa0500630:CDS |
| AGGATGGGAAGATTGTAGGG+AGG | 0.707626 | 3_4:-41134039 | Msa0500630:CDS |
| TAGTGAGGATGCAAGCGGTG+GGG | 0.710269 | 3_4:-41134414 | Msa0500630:exon |
| GTAACCGTGTGATCGTGTCA+TGG | 0.710694 | 3_4:-41127697 | Msa0500630:three_prime_UTR |
| ATTATGTGATAATAACACGA+AGG | 0.713676 | 3_4:-41132547 | Msa0500630:CDS |
| TCAAGATGGTGATCATGCTG+TGG | 0.730772 | 3_4:-41133879 | Msa0500630:CDS |
| ACATAAGCAAACCTTGACTG+CGG | 0.730908 | 3_4:+41130162 | None:intergenic |
| GTCGTCGTTCAACAACAAGA+CGG | 0.732356 | 3_4:-41134313 | Msa0500630:CDS |
| ACCGTGTGATCGTGTCATGG+TGG | 0.737480 | 3_4:-41127694 | Msa0500630:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTAAAAAAAAAAA+AGG | + | chr3_4:41133639-41133658 | None:intergenic | 0.0% |
| !! | TAAAACATAAGAAATAATAT+TGG | + | chr3_4:41131015-41131034 | None:intergenic | 10.0% |
| !! | TAACTTTATAATATTAATCT+TGG | - | chr3_4:41132726-41132745 | Msa0500630:CDS | 10.0% |
| !!! | GTAAAATTTGAAATTAATTG+AGG | + | chr3_4:41127442-41127461 | None:intergenic | 15.0% |
| !! | ATATAACTATATGTCTTAAT+TGG | + | chr3_4:41127539-41127558 | None:intergenic | 15.0% |
| !!! | ACTTATTTGAGATTATTTAA+TGG | - | chr3_4:41128424-41128443 | Msa0500630:CDS | 15.0% |
| !! | TTATAGAAACATACATAAAA+GGG | + | chr3_4:41130978-41130997 | None:intergenic | 15.0% |
| !! | ATTATAGAAACATACATAAA+AGG | + | chr3_4:41130979-41130998 | None:intergenic | 15.0% |
| !! | TCAAATTTGATCAAATATTA+TGG | - | chr3_4:41131628-41131647 | Msa0500630:intron | 15.0% |
| !!! | ATTTTATGTATACATATATC+TGG | + | chr3_4:41133040-41133059 | None:intergenic | 15.0% |
| !!! | TTATTTTTTTCATTCATAAC+TGG | - | chr3_4:41133831-41133850 | Msa0500630:CDS | 15.0% |
| !!! | TATTTTTTTCATTCATAACT+GGG | - | chr3_4:41133832-41133851 | Msa0500630:CDS | 15.0% |
| !!! | TTTGAATATTAAATAATGGA+AGG | + | chr3_4:41133860-41133879 | None:intergenic | 15.0% |
| !! | TCATATTAAACTAACAAAAA+TGG | + | chr3_4:41134553-41134572 | None:intergenic | 15.0% |
| !!! | AAATTTGAAATTAATTGAGG+TGG | + | chr3_4:41127439-41127458 | None:intergenic | 20.0% |
| !!! | ACTCTGTTTATTTATTTTCT+TGG | + | chr3_4:41127585-41127604 | None:intergenic | 20.0% |
| !! | TTATGAAAATAAGCTGAAAA+GGG | + | chr3_4:41128495-41128514 | None:intergenic | 20.0% |
| !!! | CTTATTTTCATAAGTTCTTT+AGG | - | chr3_4:41128502-41128521 | Msa0500630:CDS | 20.0% |
| !!! | AAATTGTTAGTTTGAGATTT+TGG | + | chr3_4:41129375-41129394 | None:intergenic | 20.0% |
| !! | AAAATCTCAAACTAACAATT+TGG | - | chr3_4:41129374-41129393 | Msa0500630:intron | 20.0% |
| !! | TGTTATTATCACATAATTCT+CGG | + | chr3_4:41129476-41129495 | None:intergenic | 20.0% |
| !! | TTCTTTATCTATATATTCAG+GGG | + | chr3_4:41129670-41129689 | None:intergenic | 20.0% |
| !! | CTTCTTTATCTATATATTCA+GGG | + | chr3_4:41129671-41129690 | None:intergenic | 20.0% |
| !! | TCTTCTTTATCTATATATTC+AGG | + | chr3_4:41129672-41129691 | None:intergenic | 20.0% |
| !! | GATAATATTTCTTATGAGAA+TGG | - | chr3_4:41129690-41129709 | Msa0500630:intron | 20.0% |
| !! | TTATTACCAGAAGAAATATT+TGG | + | chr3_4:41129807-41129826 | None:intergenic | 20.0% |
| !! | GATAACAAATTCATTTCTTT+AGG | - | chr3_4:41130417-41130436 | Msa0500630:intron | 20.0% |
| !!! | TGAAATTTTTCATGAGATTT+AGG | - | chr3_4:41130465-41130484 | Msa0500630:intron | 20.0% |
| !! | ACAAATATTAGATTAAGACA+TGG | - | chr3_4:41130516-41130535 | Msa0500630:intron | 20.0% |
| !! | TTTCTTTCTCATTGTTAATT+TGG | - | chr3_4:41131216-41131235 | Msa0500630:CDS | 20.0% |
| !!! | AGCTATATTTTATTTCATAG+AGG | + | chr3_4:41131350-41131369 | None:intergenic | 20.0% |
| !!! | ATTTGACTTAAAAGGTATAT+TGG | + | chr3_4:41131614-41131633 | None:intergenic | 20.0% |
| !!! | TTGATCAAATTTGACTTAAA+AGG | + | chr3_4:41131622-41131641 | None:intergenic | 20.0% |
| !! | TATTACCATAAATACTACTA+CGG | + | chr3_4:41131681-41131700 | None:intergenic | 20.0% |
| !!! | TTTTATTTGATGTTTTAGCA+TGG | - | chr3_4:41132101-41132120 | Msa0500630:CDS | 20.0% |
| !!! | CAATTAAAAATTTTCAACTG+AGG | + | chr3_4:41132182-41132201 | None:intergenic | 20.0% |
| !!! | AATATATCTTTTTACATTGC+AGG | - | chr3_4:41132404-41132423 | Msa0500630:CDS | 20.0% |
| !! | GAAAATATGAAGAAGAAAAA+AGG | + | chr3_4:41132761-41132780 | None:intergenic | 20.0% |
| !! | TTGATATATTGCCTTAATTA+CGG | - | chr3_4:41132849-41132868 | Msa0500630:intron | 20.0% |
| !! | ACTGGTAGATATATAATATA+AGG | - | chr3_4:41132999-41133018 | Msa0500630:intron | 20.0% |
| !! | AAATATTGAAGTTAACTTAG+GGG | + | chr3_4:41133111-41133130 | None:intergenic | 20.0% |
| !! | CAAATATTGAAGTTAACTTA+GGG | + | chr3_4:41133112-41133131 | None:intergenic | 20.0% |
| !! | ACAAATATTGAAGTTAACTT+AGG | + | chr3_4:41133113-41133132 | None:intergenic | 20.0% |
| !! | AAAAAAAAAATAATCTACCC+CGG | + | chr3_4:41133912-41133931 | None:intergenic | 20.0% |
| !!! | ATTTTAATTCATGGAATTTC+TGG | - | chr3_4:41134084-41134103 | Msa0500630:CDS | 20.0% |
| !! | TCGAAAATCATATCATAATT+TGG | - | chr3_4:41134458-41134477 | Msa0500630:five_prime_UTR | 20.0% |
| !! | AAAATCATATCATAATTTGG+TGG | - | chr3_4:41134461-41134480 | Msa0500630:five_prime_UTR | 20.0% |
| !! | TATACAATTATACATTCGAA+TGG | + | chr3_4:41134668-41134687 | None:intergenic | 20.0% |
| ! | TGAATATTCCAATAATGTTG+AGG | + | chr3_4:41127499-41127518 | None:intergenic | 25.0% |
| ! | ACTATATGTCTTAATTGGAT+TGG | + | chr3_4:41127534-41127553 | None:intergenic | 25.0% |
| ! | AACAGAGTAATTAATTAGTG+AGG | - | chr3_4:41127597-41127616 | Msa0500630:three_prime_UTR | 25.0% |
| !!! | GATTTGAACGATTTTTTCTT+TGG | + | chr3_4:41127798-41127817 | None:intergenic | 25.0% |
| !! | CAAATGTATCTTGATAACAA+AGG | - | chr3_4:41127845-41127864 | Msa0500630:three_prime_UTR | 25.0% |
| ! | ATATCATCAACAGATTCTAA+CGG | + | chr3_4:41127923-41127942 | None:intergenic | 25.0% |
| ! | ATATTGATCATCAATCTTTG+AGG | - | chr3_4:41127939-41127958 | Msa0500630:CDS | 25.0% |
| ! | CTTATGAAAATAAGCTGAAA+AGG | + | chr3_4:41128496-41128515 | None:intergenic | 25.0% |
| ! | GCTTATAGCATGTATTAAAA+TGG | - | chr3_4:41128541-41128560 | Msa0500630:intron | 25.0% |
| ! | CATTTAAGTGCTTATGTATA+AGG | + | chr3_4:41128600-41128619 | None:intergenic | 25.0% |
| !!! | TAAAACTTTAAGACCTTGTT+TGG | + | chr3_4:41128664-41128683 | None:intergenic | 25.0% |
| ! | TTGCAATTTATTTGCATTCA+GGG | + | chr3_4:41128832-41128851 | None:intergenic | 25.0% |
| ! | TTTGCAATTTATTTGCATTC+AGG | + | chr3_4:41128833-41128852 | None:intergenic | 25.0% |
| !!! | TAGTAGTTTTTTCAAAACCT+TGG | - | chr3_4:41129094-41129113 | Msa0500630:intron | 25.0% |
| ! | CAAACTAACAATTTGGATAT+AGG | - | chr3_4:41129381-41129400 | Msa0500630:intron | 25.0% |
| ! | ATTATGTGATAATAACACGA+AGG | - | chr3_4:41129479-41129498 | Msa0500630:intron | 25.0% |
| ! | ACTGAATTAGTAACAATCTA+TGG | - | chr3_4:41130067-41130086 | Msa0500630:intron | 25.0% |
| ! | ACTGTATATACTGTATTCTA+TGG | - | chr3_4:41130100-41130119 | Msa0500630:intron | 25.0% |
| ! | TGTAAGTTTCACTAAAGATT+TGG | - | chr3_4:41130157-41130176 | Msa0500630:intron | 25.0% |
| ! | AATATTAGATTAAGACATGG+TGG | - | chr3_4:41130519-41130538 | Msa0500630:intron | 25.0% |
| !! | CTTGAAATTTTACATCCAAT+TGG | + | chr3_4:41131515-41131534 | None:intergenic | 25.0% |
| ! | TGATTATAACAGACTAAACA+AGG | + | chr3_4:41131549-41131568 | None:intergenic | 25.0% |
| ! | AATCATGATTATTGTGAAGT+TGG | - | chr3_4:41131564-41131583 | Msa0500630:intron | 25.0% |
| !! | CTTAAAAGGTATATTGGTTA+TGG | + | chr3_4:41131608-41131627 | None:intergenic | 25.0% |
| !!! | TTTTAAAAAGTCTCTAACTC+TGG | - | chr3_4:41131726-41131745 | Msa0500630:intron | 25.0% |
| ! | TCTCATAACATGTAAATACA+TGG | + | chr3_4:41131893-41131912 | None:intergenic | 25.0% |
| ! | AATTAACCACATTATCACAT+TGG | + | chr3_4:41131921-41131940 | None:intergenic | 25.0% |
| !!! | ATTGCACTATTGATAGTTTT+TGG | - | chr3_4:41131964-41131983 | Msa0500630:intron | 25.0% |
| !!! | TTGCACTATTGATAGTTTTT+GGG | - | chr3_4:41131965-41131984 | Msa0500630:intron | 25.0% |
| !!! | AAAACCACAAATTTTTTACC+TGG | - | chr3_4:41132046-41132065 | Msa0500630:CDS | 25.0% |
| ! | ATGATAAGAATTTAAAAGCC+AGG | + | chr3_4:41132067-41132086 | None:intergenic | 25.0% |
| ! | AATAAGATTTATTGCCTTCA+CGG | + | chr3_4:41132494-41132513 | None:intergenic | 25.0% |
| !! | TATTAGACACTACTATTTTG+AGG | - | chr3_4:41132555-41132574 | Msa0500630:CDS | 25.0% |
| !! | ACTTTTCTTACATGATTCAT+TGG | - | chr3_4:41132638-41132657 | Msa0500630:CDS | 25.0% |
| !! | TCATATTTTCAGTCATTAGA+AGG | - | chr3_4:41132771-41132790 | Msa0500630:CDS | 25.0% |
| !! | CATATTTTCAGTCATTAGAA+GGG | - | chr3_4:41132772-41132791 | Msa0500630:CDS | 25.0% |
| ! | TGATATATTGCCTTAATTAC+GGG | - | chr3_4:41132850-41132869 | Msa0500630:intron | 25.0% |
| ! | TTAGAGTAAAATTAAGCATC+TGG | - | chr3_4:41132883-41132902 | Msa0500630:intron | 25.0% |
| ! | TAGAGTAAAATTAAGCATCT+GGG | - | chr3_4:41132884-41132903 | Msa0500630:intron | 25.0% |
| ! | CAATATTTGTTTAAGCTTCA+AGG | - | chr3_4:41133123-41133142 | Msa0500630:intron | 25.0% |
| !!! | CGTTTCACTTTTAATTTGTT+CGG | + | chr3_4:41133271-41133290 | None:intergenic | 25.0% |
| !! | ATAATGAAGATTTTTCCCAA+CGG | + | chr3_4:41133596-41133615 | None:intergenic | 25.0% |
| ! | AAATCTTCATTATAAATCCC+AGG | - | chr3_4:41133603-41133622 | Msa0500630:intron | 25.0% |
| ! | AATCTTCATTATAAATCCCA+GGG | - | chr3_4:41133604-41133623 | Msa0500630:intron | 25.0% |
| ! | AAAAAGGATTTATTTACCCT+GGG | + | chr3_4:41133623-41133642 | None:intergenic | 25.0% |
| ! | AAAAAAGGATTTATTTACCC+TGG | + | chr3_4:41133624-41133643 | None:intergenic | 25.0% |
| ! | ATTCAAAATAAATAGCATGC+TGG | - | chr3_4:41133873-41133892 | Msa0500630:CDS | 25.0% |
| ! | TTCAAATATCAAATGCAGAA+GGG | + | chr3_4:41134118-41134137 | None:intergenic | 25.0% |
| ! | TTTCAAATATCAAATGCAGA+AGG | + | chr3_4:41134119-41134138 | None:intergenic | 25.0% |
| !! | TGATGATATTTTGCTAATTC+AGG | - | chr3_4:41134405-41134424 | Msa0500630:CDS | 25.0% |
| !! | GATGATATTTTGCTAATTCA+GGG | - | chr3_4:41134406-41134425 | Msa0500630:CDS | 25.0% |
| ! | AATTATACATTCGAATGGAA+AGG | + | chr3_4:41134663-41134682 | None:intergenic | 25.0% |
| ! | ATTTCTTTATGCTGGAAAAA+TGG | + | chr3_4:41134726-41134745 | None:intergenic | 25.0% |
| TTGAAATTAATTGAGGTGGT+GGG | + | chr3_4:41127435-41127454 | None:intergenic | 30.0% | |
| ! | TTTGAAATTAATTGAGGTGG+TGG | + | chr3_4:41127436-41127455 | None:intergenic | 30.0% |
| CTTTATAGCCTCAACATTAT+TGG | - | chr3_4:41127488-41127507 | Msa0500630:three_prime_UTR | 30.0% | |
| !!! | CTTTGGATTTTAAAACACCT+TGG | + | chr3_4:41127781-41127800 | None:intergenic | 30.0% |
| !! | GAATACTTGGTCTTATGTTT+GGG | - | chr3_4:41128029-41128048 | Msa0500630:intron | 30.0% |
| CTTAATATCCAACAAATTCG+CGG | + | chr3_4:41128116-41128135 | None:intergenic | 30.0% | |
| !! | CGAATTTGTTGGATATTAAG+TGG | - | chr3_4:41128116-41128135 | Msa0500630:intron | 30.0% |
| !! | TCAAATAAGTTGATCCAAAC+AGG | + | chr3_4:41128414-41128433 | None:intergenic | 30.0% |
| !! | TGCTATAAGCTGTTTTCATA+AGG | + | chr3_4:41128531-41128550 | None:intergenic | 30.0% |
| !! | TAAGTTGTTTTGTCCAAACA+AGG | - | chr3_4:41128648-41128667 | Msa0500630:intron | 30.0% |
| TGTCAAAGATAGTTGTTTGA+TGG | + | chr3_4:41128692-41128711 | None:intergenic | 30.0% | |
| TATAGTCTATGACTGCATTT+AGG | + | chr3_4:41128751-41128770 | None:intergenic | 30.0% | |
| !!! | TTTTTTCAAAACCTTGGTCA+TGG | - | chr3_4:41129100-41129119 | Msa0500630:intron | 30.0% |
| ! | AAAACAGATTAGAGTTTTGC+TGG | + | chr3_4:41129181-41129200 | None:intergenic | 30.0% |
| ! | AGCAAAACTCTAATCTGTTT+TGG | - | chr3_4:41129180-41129199 | Msa0500630:intron | 30.0% |
| GAATTTCAACATATGAGTGT+TGG | + | chr3_4:41129212-41129231 | None:intergenic | 30.0% | |
| ATATGTTGAAATTCTCCTTC+AGG | - | chr3_4:41129218-41129237 | Msa0500630:intron | 30.0% | |
| TATGTTGAAATTCTCCTTCA+GGG | - | chr3_4:41129219-41129238 | Msa0500630:intron | 30.0% | |
| ! | TCATTTCTAGGGATAACTAT+GGG | + | chr3_4:41129744-41129763 | None:intergenic | 30.0% |
| ! | TTTTCCTTTAAGTCAATCAC+TGG | - | chr3_4:41129848-41129867 | Msa0500630:intron | 30.0% |
| ! | CGTCTAAGTTTAAGCATTTT+AGG | + | chr3_4:41129899-41129918 | None:intergenic | 30.0% |
| TTCAGAATCTTGATAAGCTT+TGG | + | chr3_4:41129961-41129980 | None:intergenic | 30.0% | |
| AAACAAAGGAGACATTACAA+TGG | + | chr3_4:41130040-41130059 | None:intergenic | 30.0% | |
| ATTCAGTTGACAGAAAACAA+AGG | + | chr3_4:41130054-41130073 | None:intergenic | 30.0% | |
| !!! | AGTATTTTGGTAGAGCAAAA+TGG | - | chr3_4:41130229-41130248 | Msa0500630:CDS | 30.0% |
| ! | TTTCAAGGAAGCATATTTCA+AGG | + | chr3_4:41130276-41130295 | None:intergenic | 30.0% |
| ATCAACAAAGCAACTACATA+AGG | + | chr3_4:41130304-41130323 | None:intergenic | 30.0% | |
| AAATTCATTTCTTTAGGCCT+GGG | - | chr3_4:41130423-41130442 | Msa0500630:intron | 30.0% | |
| TTTCATGAGATTTAGGAACT+AGG | - | chr3_4:41130472-41130491 | Msa0500630:intron | 30.0% | |
| !!! | CATGATTTTGTTTTCCAACT+TGG | + | chr3_4:41130597-41130616 | None:intergenic | 30.0% |
| ! | ATTGCCAAAAAGATCACTTT+TGG | + | chr3_4:41130731-41130750 | None:intergenic | 30.0% |
| TGATACTAAACCCAATTTAG+TGG | - | chr3_4:41130789-41130808 | Msa0500630:intron | 30.0% | |
| ! | ACCTTCTTTTCCACTAAATT+GGG | + | chr3_4:41130802-41130821 | None:intergenic | 30.0% |
| ! | AACCTTCTTTTCCACTAAAT+TGG | + | chr3_4:41130803-41130822 | None:intergenic | 30.0% |
| ATTTAGTGGAAAAGAAGGTT+AGG | - | chr3_4:41130803-41130822 | Msa0500630:intron | 30.0% | |
| TTTAGTGGAAAAGAAGGTTA+GGG | - | chr3_4:41130804-41130823 | Msa0500630:intron | 30.0% | |
| !! | TTACGTTTGATTTGATCAAC+AGG | - | chr3_4:41131032-41131051 | Msa0500630:intron | 30.0% |
| TTGATGCTCAAATATATCTG+TGG | - | chr3_4:41131055-41131074 | Msa0500630:intron | 30.0% | |
| CTCAAATATATCTGTGGAAA+TGG | - | chr3_4:41131061-41131080 | Msa0500630:intron | 30.0% | |
| AAAGTGAGAATCTATCTTTC+TGG | - | chr3_4:41131125-41131144 | Msa0500630:CDS | 30.0% | |
| ! | CAAATATCTTCAGGTATTGT+CGG | + | chr3_4:41131244-41131263 | None:intergenic | 30.0% |
| ATTCAGCAATAAAATTGCAG+AGG | + | chr3_4:41131288-41131307 | None:intergenic | 30.0% | |
| ! | TCTGCAATTTTATTGCTGAA+TGG | - | chr3_4:41131287-41131306 | Msa0500630:CDS | 30.0% |
| TTAATAGTGCGTAACAGTTT+AGG | - | chr3_4:41131465-41131484 | Msa0500630:intron | 30.0% | |
| ! | GAAATTTTACATCCAATTGG+TGG | + | chr3_4:41131512-41131531 | None:intergenic | 30.0% |
| ! | TGTAAAATTTCAAGTAGACG+AGG | - | chr3_4:41131521-41131540 | Msa0500630:intron | 30.0% |
| ! | AACAACAGATGTATTGACAA+AGG | + | chr3_4:41131704-41131723 | None:intergenic | 30.0% |
| !!! | TTTTTTGTTTCATGTCCTAC+AGG | - | chr3_4:41131768-41131787 | Msa0500630:intron | 30.0% |
| ! | ATTACTCCAATGTGATAATG+TGG | - | chr3_4:41131912-41131931 | Msa0500630:intron | 30.0% |
| !!! | TTGATAGTTTTTGGGTAATG+TGG | - | chr3_4:41131973-41131992 | Msa0500630:intron | 30.0% |
| ACCATCAATAGTGCAATAAT+GGG | + | chr3_4:41132013-41132032 | None:intergenic | 30.0% | |
| AACCATCAATAGTGCAATAA+TGG | + | chr3_4:41132014-41132033 | None:intergenic | 30.0% | |
| !!! | ATTTGTGGTTTTAACAGACA+CGG | + | chr3_4:41132038-41132057 | None:intergenic | 30.0% |
| AAAGCCAGGTAAAAAATTTG+TGG | + | chr3_4:41132053-41132072 | None:intergenic | 30.0% | |
| TAAAACAATCACTATAGACG+GGG | + | chr3_4:41132146-41132165 | None:intergenic | 30.0% | |
| GTAAAACAATCACTATAGAC+GGG | + | chr3_4:41132147-41132166 | None:intergenic | 30.0% | |
| CGTAAAACAATCACTATAGA+CGG | + | chr3_4:41132148-41132167 | None:intergenic | 30.0% | |
| TAGGAATTGTCGTGTAATAT+AGG | + | chr3_4:41132283-41132302 | None:intergenic | 30.0% | |
| ATTCCTACTGAATCTTAAAC+AGG | - | chr3_4:41132296-41132315 | Msa0500630:CDS | 30.0% | |
| ! | TATCTTTTTACATTGCAGGA+TGG | - | chr3_4:41132408-41132427 | Msa0500630:CDS | 30.0% |
| GATAAATATATGTAGAGCAC+TGG | - | chr3_4:41132581-41132600 | Msa0500630:CDS | 30.0% | |
| TTCATTGGCCATTTAATTGA+TGG | - | chr3_4:41132653-41132672 | Msa0500630:CDS | 30.0% | |
| TCACTGATCCATCAATTAAA+TGG | + | chr3_4:41132664-41132683 | None:intergenic | 30.0% | |
| GTGAGATATGATATTCATCA+TGG | - | chr3_4:41132680-41132699 | Msa0500630:CDS | 30.0% | |
| ! | CATGCAATTTTGAATTCATG+AGG | + | chr3_4:41132800-41132819 | None:intergenic | 30.0% |
| ATTCAAAATTGCATGCTTAG+AGG | - | chr3_4:41132805-41132824 | Msa0500630:intron | 30.0% | |
| TAAGGCAATATATCAACAAG+TGG | + | chr3_4:41132845-41132864 | None:intergenic | 30.0% | |
| AGAGTAAAATTAAGCATCTG+GGG | - | chr3_4:41132885-41132904 | Msa0500630:intron | 30.0% | |
| CAAAATCGAACTTATGTAAC+TGG | - | chr3_4:41132981-41133000 | Msa0500630:intron | 30.0% | |
| AAATAATCACATGCACTAGA+TGG | + | chr3_4:41133171-41133190 | None:intergenic | 30.0% | |
| CTGAAAATTGTTCAAACTTC+TGG | + | chr3_4:41133433-41133452 | None:intergenic | 30.0% | |
| ! | AACAATTTTCAGCATGATCA+TGG | - | chr3_4:41133441-41133460 | Msa0500630:intron | 30.0% |
| TGATGAAATCAGTTACCTTA+AGG | - | chr3_4:41133562-41133581 | Msa0500630:intron | 30.0% | |
| ! | TAATGAAGATTTTTCCCAAC+GGG | + | chr3_4:41133595-41133614 | None:intergenic | 30.0% |
| TCCTTGAATATAAGTTTGTC+AGG | - | chr3_4:41133669-41133688 | Msa0500630:CDS | 30.0% | |
| TGCAAGCTTAAACATAAGAA+AGG | + | chr3_4:41133695-41133714 | None:intergenic | 30.0% | |
| TTTCTTATGTTTAAGCTTGC+AGG | - | chr3_4:41133694-41133713 | Msa0500630:CDS | 30.0% | |
| TTCTTATGTTTAAGCTTGCA+GGG | - | chr3_4:41133695-41133714 | Msa0500630:CDS | 30.0% | |
| ! | ATGATTTTGTGTCAAGACTT+CGG | + | chr3_4:41133736-41133755 | None:intergenic | 30.0% |
| ATTCAGAGTTTATATCACAC+AGG | + | chr3_4:41133957-41133976 | None:intergenic | 30.0% | |
| ATCATTGTTCAGCAAGATTA+AGG | + | chr3_4:41134055-41134074 | None:intergenic | 30.0% | |
| TCAAATATCAAATGCAGAAG+GGG | + | chr3_4:41134117-41134136 | None:intergenic | 30.0% | |
| TGCAGCTCTTAAAAGAATAT+AGG | - | chr3_4:41134198-41134217 | Msa0500630:CDS | 30.0% | |
| AAATCATTCCACAACAGAAA+AGG | + | chr3_4:41134437-41134456 | None:intergenic | 30.0% | |
| ! | TCATATCATAATTTGGTGGA+TGG | - | chr3_4:41134465-41134484 | Msa0500630:five_prime_UTR | 30.0% |
| ! | CATATCATAATTTGGTGGAT+GGG | - | chr3_4:41134466-41134485 | Msa0500630:five_prime_UTR | 30.0% |
| AGAAGACATGTAAACTTCTT+GGG | + | chr3_4:41134604-41134623 | None:intergenic | 30.0% | |
| AAGAAGACATGTAAACTTCT+TGG | + | chr3_4:41134605-41134624 | None:intergenic | 30.0% | |
| TGCGTAATATTTCTTTATGC+TGG | + | chr3_4:41134734-41134753 | None:intergenic | 30.0% | |
| GGGAAGAAAGATTGATCAAA+CGG | - | chr3_4:41127294-41127313 | Msa0500630:three_prime_UTR | 35.0% | |
| TTAATTAGTGAGGATGCAAG+CGG | - | chr3_4:41127607-41127626 | Msa0500630:three_prime_UTR | 35.0% | |
| GTTCATTCAAATCATCACCA+TGG | - | chr3_4:41127735-41127754 | Msa0500630:intron | 35.0% | |
| !!! | GAGTTGTAATTTTGATTCCG+AGG | - | chr3_4:41127967-41127986 | Msa0500630:intron | 35.0% |
| !!! | TGTAATTTTGATTCCGAGGA+TGG | - | chr3_4:41127971-41127990 | Msa0500630:intron | 35.0% |
| !!! | GTAATTTTGATTCCGAGGAT+GGG | - | chr3_4:41127972-41127991 | Msa0500630:intron | 35.0% |
| !! | CGAATACTTGGTCTTATGTT+TGG | - | chr3_4:41128028-41128047 | Msa0500630:intron | 35.0% |
| GTGAATTTGAAGATGGTGTT+GGG | - | chr3_4:41128068-41128087 | Msa0500630:intron | 35.0% | |
| !! | TGGTTCTATTGGTGTTGTAA+AGG | - | chr3_4:41128186-41128205 | Msa0500630:intron | 35.0% |
| AGGTTATGTATCTTGCTCAT+GGG | - | chr3_4:41128314-41128333 | Msa0500630:intron | 35.0% | |
| ! | TCATAGTCTTAAGACCTGTT+TGG | - | chr3_4:41128397-41128416 | Msa0500630:intron | 35.0% |
| ATGATAAGTGCTTGTGTTGT+TGG | - | chr3_4:41128617-41128636 | Msa0500630:intron | 35.0% | |
| AGTCATAGACTATAGAGAGA+CGG | - | chr3_4:41128757-41128776 | Msa0500630:intron | 35.0% | |
| GACGACTCATTTCATATTCA+GGG | + | chr3_4:41128801-41128820 | None:intergenic | 35.0% | |
| TGACGACTCATTTCATATTC+AGG | + | chr3_4:41128802-41128821 | None:intergenic | 35.0% | |
| ACTAACAGAGTCTACATTCA+GGG | + | chr3_4:41128861-41128880 | None:intergenic | 35.0% | |
| TCAGGGACTAAATTGACTAA+CGG | + | chr3_4:41128876-41128895 | None:intergenic | 35.0% | |
| ACTAACAGAGTCTACATTCA+GGG | + | chr3_4:41128861-41128880 | None:intergenic | 35.0% | |
| GACTTTGTTGGTCAATTTCA+GGG | + | chr3_4:41128957-41128976 | None:intergenic | 35.0% | |
| AGACTTTGTTGGTCAATTTC+AGG | + | chr3_4:41128958-41128977 | None:intergenic | 35.0% | |
| ACCAACAAAGTCTACATTCA+GGG | - | chr3_4:41128965-41128984 | Msa0500630:intron | 35.0% | |
| TTTGCAATTTCTCTGCATTC+AGG | - | chr3_4:41128993-41129012 | Msa0500630:intron | 35.0% | |
| TTGCAATTTCTCTGCATTCA+GGG | - | chr3_4:41128994-41129013 | Msa0500630:intron | 35.0% | |
| TCAATTAAACTCCATGACCA+AGG | + | chr3_4:41129114-41129133 | None:intergenic | 35.0% | |
| TCTTCCACATTGTACATACT+AGG | + | chr3_4:41129330-41129349 | None:intergenic | 35.0% | |
| !! | GAGATTTTGGAGATGTTGTT+AGG | + | chr3_4:41129362-41129381 | None:intergenic | 35.0% |
| GTTTACCTAGTGAAACATCA+AGG | - | chr3_4:41129553-41129572 | Msa0500630:CDS | 35.0% | |
| TTTCGTCAAGGTCACTAAAA+AGG | + | chr3_4:41129614-41129633 | None:intergenic | 35.0% | |
| ! | CATTCATTCTGTTTTCGTCA+AGG | + | chr3_4:41129626-41129645 | None:intergenic | 35.0% |
| AGAATGAATGATCGATACGA+GGG | - | chr3_4:41129636-41129655 | Msa0500630:intron | 35.0% | |
| ! | CTCATTTCTAGGGATAACTA+TGG | + | chr3_4:41129745-41129764 | None:intergenic | 35.0% |
| CATAGTTATCCCTAGAAATG+AGG | - | chr3_4:41129743-41129762 | Msa0500630:CDS | 35.0% | |
| TCCTTGCCAAATATTTCTTC+TGG | - | chr3_4:41129798-41129817 | Msa0500630:CDS | 35.0% | |
| ACCAGAAGAAATATTTGGCA+AGG | + | chr3_4:41129802-41129821 | None:intergenic | 35.0% | |
| TTAAAGGAAAACGAACGTGT+TGG | + | chr3_4:41129839-41129858 | None:intergenic | 35.0% | |
| TTTAAGTCAATCACTGGACT+CGG | - | chr3_4:41129854-41129873 | Msa0500630:intron | 35.0% | |
| TTATACCAGCTTTCTTACCA+GGG | + | chr3_4:41130013-41130032 | None:intergenic | 35.0% | |
| TTTATACCAGCTTTCTTACC+AGG | + | chr3_4:41130014-41130033 | None:intergenic | 35.0% | |
| !! | CTACTACATGCTTTAGTTTG+CGG | - | chr3_4:41130194-41130213 | Msa0500630:CDS | 35.0% |
| ! | GAGACATGTGTCAAGTATTT+TGG | - | chr3_4:41130216-41130235 | Msa0500630:CDS | 35.0% |
| ! | TTTTGGTAGAGCAAAATGGA+AGG | - | chr3_4:41130233-41130252 | Msa0500630:CDS | 35.0% |
| CTACATAAGGCTGTATTTCA+AGG | + | chr3_4:41130291-41130310 | None:intergenic | 35.0% | |
| !! | ACATAACACTTGCTGTATGA+AGG | - | chr3_4:41130346-41130365 | Msa0500630:intron | 35.0% |
| !! | CATAACACTTGCTGTATGAA+GGG | - | chr3_4:41130347-41130366 | Msa0500630:intron | 35.0% |
| GACATTCATTGCAGAAAATC+TGG | - | chr3_4:41130392-41130411 | Msa0500630:intron | 35.0% | |
| CAAATTCATTTCTTTAGGCC+TGG | - | chr3_4:41130422-41130441 | Msa0500630:intron | 35.0% | |
| AATTCATTTCTTTAGGCCTG+GGG | - | chr3_4:41130424-41130443 | Msa0500630:intron | 35.0% | |
| GTTGGAAAACAAAATCATGC+AGG | - | chr3_4:41130598-41130617 | Msa0500630:intron | 35.0% | |
| !! | CTTTTGGCATCATTTGGAAT+AGG | + | chr3_4:41130715-41130734 | None:intergenic | 35.0% |
| !! | AGATCACTTTTGGCATCATT+TGG | + | chr3_4:41130721-41130740 | None:intergenic | 35.0% |
| ! | GATGCCAAAAGTGATCTTTT+TGG | - | chr3_4:41130724-41130743 | Msa0500630:intron | 35.0% |
| TCTGTGCAAATCTTATTCTC+TGG | + | chr3_4:41130757-41130776 | None:intergenic | 35.0% | |
| ACCCAATTTAGTGGAAAAGA+AGG | - | chr3_4:41130798-41130817 | Msa0500630:intron | 35.0% | |
| ATTCAACGATGCTATCTGTT+TGG | + | chr3_4:41130845-41130864 | None:intergenic | 35.0% | |
| CATAGCTGTAGAAAAAGTGA+AGG | + | chr3_4:41130893-41130912 | None:intergenic | 35.0% | |
| !! | ACTTTTTCTACAGCTATGCT+GGG | - | chr3_4:41130895-41130914 | Msa0500630:intron | 35.0% |
| CGACAATACCTGAAGATATT+TGG | - | chr3_4:41131242-41131261 | Msa0500630:CDS | 35.0% | |
| GTTAGACACCAAATATCTTC+AGG | + | chr3_4:41131253-41131272 | None:intergenic | 35.0% | |
| ACGCAAGTGAATGAAAAGAA+AGG | + | chr3_4:41131422-41131441 | None:intergenic | 35.0% | |
| ATGAGCCGTAGTAGTATTTA+TGG | - | chr3_4:41131673-41131692 | Msa0500630:intron | 35.0% | |
| AATGTATGATCAGTGCATTC+AGG | + | chr3_4:41131944-41131963 | None:intergenic | 35.0% | |
| TTTGGGTAATGTGGTTAATC+TGG | - | chr3_4:41131982-41132001 | Msa0500630:intron | 35.0% | |
| ATTTCTCATTTGCAGGAGAA+TGG | - | chr3_4:41132216-41132235 | Msa0500630:CDS | 35.0% | |
| ! | TCACCTGTTTAAGATTCAGT+AGG | + | chr3_4:41132302-41132321 | None:intergenic | 35.0% |
| ATATATCAACAAGTGGAAGC+TGG | + | chr3_4:41132838-41132857 | None:intergenic | 35.0% | |
| CTCATTTACACCCGTAATTA+AGG | + | chr3_4:41132863-41132882 | None:intergenic | 35.0% | |
| ! | TAAAATTAAGCATCTGGGGT+CGG | - | chr3_4:41132889-41132908 | Msa0500630:intron | 35.0% |
| TCACTCACACATAAACAGAA+AGG | + | chr3_4:41132929-41132948 | None:intergenic | 35.0% | |
| TTCTGTTTATGTGTGAGTGA+TGG | - | chr3_4:41132929-41132948 | Msa0500630:intron | 35.0% | |
| GTATGTAGCATTACTTGGAA+AGG | + | chr3_4:41133067-41133086 | None:intergenic | 35.0% | |
| CTCATGTATGTAGCATTACT+TGG | + | chr3_4:41133072-41133091 | None:intergenic | 35.0% | |
| CAAAATTATGTAGGCTCTGT+AGG | + | chr3_4:41133298-41133317 | None:intergenic | 35.0% | |
| ! | CTACAGAGCCTACATAATTT+TGG | - | chr3_4:41133296-41133315 | Msa0500630:intron | 35.0% |
| !! | AGCCTACATAATTTTGGAAG+TGG | - | chr3_4:41133302-41133321 | Msa0500630:intron | 35.0% |
| !! | GCCTACATAATTTTGGAAGT+GGG | - | chr3_4:41133303-41133322 | Msa0500630:intron | 35.0% |
| TCCCACTTCCAAAATTATGT+AGG | + | chr3_4:41133307-41133326 | None:intergenic | 35.0% | |
| GAAAAAGAGACTTGATACTC+TGG | + | chr3_4:41133496-41133515 | None:intergenic | 35.0% | |
| TTTCCAAAACCAGCATAGAA+CGG | + | chr3_4:41133533-41133552 | None:intergenic | 35.0% | |
| !!! | TCTATGCTGGTTTTGGAAAT+AGG | - | chr3_4:41133534-41133553 | Msa0500630:intron | 35.0% |
| !!! | CTATGCTGGTTTTGGAAATA+GGG | - | chr3_4:41133535-41133554 | Msa0500630:intron | 35.0% |
| GAAATCAGTTACCTTAAGGT+TGG | - | chr3_4:41133566-41133585 | Msa0500630:intron | 35.0% | |
| GCCTGACAAACTTATATTCA+AGG | + | chr3_4:41133673-41133692 | None:intergenic | 35.0% | |
| AGTGCAAGTTTGATACAATG+AGG | - | chr3_4:41134001-41134020 | Msa0500630:CDS | 35.0% | |
| GATTAAGGACAACAATGTGT+TGG | + | chr3_4:41134040-41134059 | None:intergenic | 35.0% | |
| !!! | TGCAGGAGGATTTTAATTCA+TGG | - | chr3_4:41134075-41134094 | Msa0500630:CDS | 35.0% |
| CAAATATCAAATGCAGAAGG+GGG | + | chr3_4:41134116-41134135 | None:intergenic | 35.0% | |
| CACGGTTACTCTTTAATCAA+AGG | + | chr3_4:41134318-41134337 | None:intergenic | 35.0% | |
| TTCTGTATTACAAGTGTGCA+TGG | - | chr3_4:41134372-41134391 | Msa0500630:CDS | 35.0% | |
| AAACTTCTTGGGATTCCATA+TGG | + | chr3_4:41134593-41134612 | None:intergenic | 35.0% | |
| ! | ACGTGGGTTTTCTTTTCTGT+GGG | + | chr3_4:41127338-41127357 | None:intergenic | 40.0% |
| ! | TACGTGGGTTTTCTTTTCTG+TGG | + | chr3_4:41127339-41127358 | None:intergenic | 40.0% |
| GAGAAGAACAAGAGTTACGT+GGG | + | chr3_4:41127354-41127373 | None:intergenic | 40.0% | |
| ! | GAGGTTGTGTTGTTCTTTCT+GGG | + | chr3_4:41127383-41127402 | None:intergenic | 40.0% |
| ! | TGAGGTTGTGTTGTTCTTTC+TGG | + | chr3_4:41127384-41127403 | None:intergenic | 40.0% |
| GGAGAGAAGTTCTTTCTTTG+AGG | + | chr3_4:41127402-41127421 | None:intergenic | 40.0% | |
| !! | AATTAATTGAGGTGGTGGGA+GGG | + | chr3_4:41127431-41127450 | None:intergenic | 40.0% |
| !! | AAATTAATTGAGGTGGTGGG+AGG | + | chr3_4:41127432-41127451 | None:intergenic | 40.0% |
| TTAGGGAGCTACATTAGTCA+AGG | - | chr3_4:41127638-41127657 | Msa0500630:three_prime_UTR | 40.0% | |
| AATCATCACCATGGTACGTT+CGG | - | chr3_4:41127744-41127763 | Msa0500630:intron | 40.0% | |
| !! | GTTCGGTTTGGTAAATTCCA+AGG | - | chr3_4:41127761-41127780 | Msa0500630:intron | 40.0% |
| !! | TTGGTCTTATGTTTGGGAGA+AGG | - | chr3_4:41128035-41128054 | Msa0500630:intron | 40.0% |
| GTGAGTGGTGAATTTGAAGA+TGG | - | chr3_4:41128061-41128080 | Msa0500630:intron | 40.0% | |
| GGTGAATTTGAAGATGGTGT+TGG | - | chr3_4:41128067-41128086 | Msa0500630:intron | 40.0% | |
| AAGTGGTCTACGAATCAAGA+TGG | - | chr3_4:41128133-41128152 | Msa0500630:intron | 40.0% | |
| ! | GAGAATGAGGATGGTTCTAT+TGG | - | chr3_4:41128175-41128194 | Msa0500630:intron | 40.0% |
| GAGGTTATGTATCTTGCTCA+TGG | - | chr3_4:41128313-41128332 | Msa0500630:CDS | 40.0% | |
| GGTTATGTATCTTGCTCATG+GGG | - | chr3_4:41128315-41128334 | Msa0500630:intron | 40.0% | |
| ATACGAGTGAATGCAAGACT+TGG | + | chr3_4:41128366-41128385 | None:intergenic | 40.0% | |
| AAGCACTCGTAAGACTGTTT+AGG | - | chr3_4:41128450-41128469 | Msa0500630:CDS | 40.0% | |
| GTCATAGACTATAGAGAGAC+GGG | - | chr3_4:41128758-41128777 | Msa0500630:intron | 40.0% | |
| GACTAACAGAGTCTACATTC+AGG | + | chr3_4:41128862-41128881 | None:intergenic | 40.0% | |
| GACTAACAGAGTCTACATTC+AGG | + | chr3_4:41128862-41128881 | None:intergenic | 40.0% | |
| GACCAACAAAGTCTACATTC+AGG | - | chr3_4:41128964-41128983 | Msa0500630:intron | 40.0% | |
| TCCCTGAATGTAGACTTTGT+TGG | + | chr3_4:41128969-41128988 | None:intergenic | 40.0% | |
| AATTCCCCATAGAGAGACAT+AGG | - | chr3_4:41129060-41129079 | Msa0500630:intron | 40.0% | |
| GATTCCTATGTCTCTCTATG+GGG | + | chr3_4:41129067-41129086 | None:intergenic | 40.0% | |
| CGATTCCTATGTCTCTCTAT+GGG | + | chr3_4:41129068-41129087 | None:intergenic | 40.0% | |
| ACGATTCCTATGTCTCTCTA+TGG | + | chr3_4:41129069-41129088 | None:intergenic | 40.0% | |
| TGAAATTCTCCTTCAGGGTA+CGG | - | chr3_4:41129224-41129243 | Msa0500630:CDS | 40.0% | |
| CACTAAGAATGCTGATGTAG+TGG | - | chr3_4:41129260-41129279 | Msa0500630:intron | 40.0% | |
| TAAGAATGCTGATGTAGTGG+AGG | - | chr3_4:41129263-41129282 | Msa0500630:intron | 40.0% | |
| ! | GGTCTTTGAGTTTCATTCTC+AGG | - | chr3_4:41129284-41129303 | Msa0500630:intron | 40.0% |
| TGAGCCTAGTATGTACAATG+TGG | - | chr3_4:41129323-41129342 | Msa0500630:intron | 40.0% | |
| GTACAATGTGGAAGATGTTG+AGG | - | chr3_4:41129335-41129354 | Msa0500630:intron | 40.0% | |
| !! | GGAAGCATTGGTAACACAAT+AGG | + | chr3_4:41129433-41129452 | None:intergenic | 40.0% |
| AAACAATCACCAAGAGAGTG+TGG | + | chr3_4:41129537-41129556 | None:intergenic | 40.0% | |
| GATCTCCTTGATGTTTCACT+AGG | + | chr3_4:41129561-41129580 | None:intergenic | 40.0% | |
| CAGAATGAATGATCGATACG+AGG | - | chr3_4:41129635-41129654 | Msa0500630:intron | 40.0% | |
| ! | GAGTCCAGTGATTGACTTAA+AGG | + | chr3_4:41129855-41129874 | None:intergenic | 40.0% |
| !! | CATTTTAGGTCATCTTTGCC+AGG | + | chr3_4:41129885-41129904 | None:intergenic | 40.0% |
| TATACCAGCTTTCTTACCAG+GGG | + | chr3_4:41130012-41130031 | None:intergenic | 40.0% | |
| ATTCATTTCTTTAGGCCTGG+GGG | - | chr3_4:41130425-41130444 | Msa0500630:intron | 40.0% | |
| AACAAGTACATTATACCCCC+AGG | + | chr3_4:41130443-41130462 | None:intergenic | 40.0% | |
| TGAGATTTAGGAACTAGGCA+TGG | - | chr3_4:41130477-41130496 | Msa0500630:intron | 40.0% | |
| !!! | GAACTAGGCATGGTGTTTTT+TGG | - | chr3_4:41130487-41130506 | Msa0500630:intron | 40.0% |
| GGAAAACAAAATCATGCAGG+TGG | - | chr3_4:41130601-41130620 | Msa0500630:intron | 40.0% | |
| TCAACAAGCAACTCTTCATC+TGG | - | chr3_4:41130628-41130647 | Msa0500630:intron | 40.0% | |
| ! | TTGGCATCATTTGGAATAGG+TGG | + | chr3_4:41130712-41130731 | None:intergenic | 40.0% |
| GATGCTATCTGTTTGGAAGT+TGG | + | chr3_4:41130838-41130857 | None:intergenic | 40.0% | |
| ! | CATCGTTGAATCTGAAGCAA+GGG | - | chr3_4:41130854-41130873 | Msa0500630:intron | 40.0% |
| !!! | CACTTTTTCTACAGCTATGC+TGG | - | chr3_4:41130894-41130913 | Msa0500630:intron | 40.0% |
| ! | CTTTTTCTACAGCTATGCTG+GGG | - | chr3_4:41130896-41130915 | Msa0500630:intron | 40.0% |
| GAATGATCGTATCGTGATCT+CGG | - | chr3_4:41131083-41131102 | Msa0500630:intron | 40.0% | |
| AACTTGATCTGACGATATGC+TGG | - | chr3_4:41131167-41131186 | Msa0500630:CDS | 40.0% | |
| ! | TCTTTTCATTCACTTGCGTC+AGG | - | chr3_4:41131423-41131442 | Msa0500630:intron | 40.0% |
| TAGTGCGTAACAGTTTAGGT+TGG | - | chr3_4:41131469-41131488 | Msa0500630:intron | 40.0% | |
| ! | AGTGCGTAACAGTTTAGGTT+GGG | - | chr3_4:41131470-41131489 | Msa0500630:intron | 40.0% |
| AAAAGTCTCTAACTCTGGTG+TGG | - | chr3_4:41131731-41131750 | Msa0500630:intron | 40.0% | |
| CTTGACTGCGGAGAATAAAT+GGG | + | chr3_4:41131855-41131874 | None:intergenic | 40.0% | |
| ACATAAGCAAACCTTGACTG+CGG | + | chr3_4:41131867-41131886 | None:intergenic | 40.0% | |
| GCCCATTATTGCACTATTGA+TGG | - | chr3_4:41132009-41132028 | Msa0500630:intron | 40.0% | |
| CTGCAAATGAGAAATCGACA+AGG | + | chr3_4:41132211-41132230 | None:intergenic | 40.0% | |
| !! | CTTGTCGATTTCTCATTTGC+AGG | - | chr3_4:41132209-41132228 | Msa0500630:CDS | 40.0% |
| ! | GATGGCAAAGTTTTACCAGA+GGG | - | chr3_4:41132426-41132445 | Msa0500630:CDS | 40.0% |
| TAGAGAGGGAAAAAGTCCAT+CGG | + | chr3_4:41132469-41132488 | None:intergenic | 40.0% | |
| !! | TAAACAGAAAGGCATTCACC+TGG | + | chr3_4:41132918-41132937 | None:intergenic | 40.0% |
| !! | TTAGGGGATTGACTTGTGAA+TGG | + | chr3_4:41133095-41133114 | None:intergenic | 40.0% |
| !! | AGCATAGAACGGATTGCAAT+CGG | + | chr3_4:41133522-41133541 | None:intergenic | 40.0% |
| !!! | AATCCGTTCTATGCTGGTTT+TGG | - | chr3_4:41133527-41133546 | Msa0500630:intron | 40.0% |
| AATAAATAGCATGCTGGTCG+TGG | - | chr3_4:41133879-41133898 | Msa0500630:CDS | 40.0% | |
| ATAAATAGCATGCTGGTCGT+GGG | - | chr3_4:41133880-41133899 | Msa0500630:CDS | 40.0% | |
| TCTTGCTGAACAATGATTGC+AGG | - | chr3_4:41134058-41134077 | Msa0500630:CDS | 40.0% | |
| ! | TGAAAGAGCCTGATGACTTT+TGG | - | chr3_4:41134134-41134153 | Msa0500630:CDS | 40.0% |
| TATTCAGGCCAAAAGTCATC+AGG | + | chr3_4:41134145-41134164 | None:intergenic | 40.0% | |
| ! | ACTTTTGGCCTGAATAACCT+TGG | - | chr3_4:41134149-41134168 | Msa0500630:CDS | 40.0% |
| AATAACCTTGGTCCTGGATA+TGG | - | chr3_4:41134161-41134180 | Msa0500630:CDS | 40.0% | |
| !! | TGTCATGGTGGTGCATATTT+TGG | - | chr3_4:41134344-41134363 | Msa0500630:CDS | 40.0% |
| CTCATCTCTTAGCATCAAAC+AGG | + | chr3_4:41134525-41134544 | None:intergenic | 40.0% | |
| TTTGATGCTAAGAGATGAGC+AGG | - | chr3_4:41134526-41134545 | Msa0500630:five_prime_UTR | 40.0% | |
| AAAGGAGTGGGACTTAACTA+TGG | + | chr3_4:41134645-41134664 | None:intergenic | 40.0% | |
| ACATTCGAATGGAAAGGAGT+GGG | + | chr3_4:41134657-41134676 | None:intergenic | 40.0% | |
| TACATTCGAATGGAAAGGAG+TGG | + | chr3_4:41134658-41134677 | None:intergenic | 40.0% | |
| GCTGGAAAAATGGAATCAAG+CGG | + | chr3_4:41134716-41134735 | None:intergenic | 40.0% | |
| GGAGAAGAACAAGAGTTACG+TGG | + | chr3_4:41127355-41127374 | None:intergenic | 45.0% | |
| !! | TGTTGTTCTTTCTGGGACGA+TGG | + | chr3_4:41127376-41127395 | None:intergenic | 45.0% |
| TTGAACGACGACGATATCGA+CGG | + | chr3_4:41127705-41127724 | None:intergenic | 45.0% | |
| GTCGTCGTTCAACAACAAGA+CGG | - | chr3_4:41127713-41127732 | Msa0500630:three_prime_UTR | 45.0% | |
| TTACCAAACCGAACGTACCA+TGG | + | chr3_4:41127755-41127774 | None:intergenic | 45.0% | |
| TCTAAGCGTTCGCGAATACT+TGG | - | chr3_4:41128016-41128035 | Msa0500630:intron | 45.0% | |
| TGAGATTGCCGCGAATTTGT+TGG | - | chr3_4:41128105-41128124 | Msa0500630:intron | 45.0% | |
| TCAAGATGGTGATCATGCTG+TGG | - | chr3_4:41128147-41128166 | Msa0500630:intron | 45.0% | |
| GCAGCAATTGAGTGTAGAAG+AGG | - | chr3_4:41128216-41128235 | Msa0500630:intron | 45.0% | |
| GAGTGTAGAAGAGGTTTCTG+TGG | - | chr3_4:41128225-41128244 | Msa0500630:intron | 45.0% | |
| AGAAGAGGTTTCTGTGGTAG+AGG | - | chr3_4:41128231-41128250 | Msa0500630:intron | 45.0% | |
| GAAGAGGTTTCTGTGGTAGA+GGG | - | chr3_4:41128232-41128251 | Msa0500630:intron | 45.0% | |
| CTCAAGTGAGCAAACTCATG+AGG | - | chr3_4:41128294-41128313 | Msa0500630:CDS | 45.0% | |
| TATCTTGCTCATGGGGAAAC+TGG | - | chr3_4:41128322-41128341 | Msa0500630:intron | 45.0% | |
| ! | GTGAATGCAAGACTTGGTCA+TGG | + | chr3_4:41128360-41128379 | None:intergenic | 45.0% |
| CTTGCATTCACTCGTATCTC+AGG | - | chr3_4:41128369-41128388 | Msa0500630:intron | 45.0% | |
| TGCGAAAAATGCCAGCCAAA+TGG | - | chr3_4:41128713-41128732 | Msa0500630:intron | 45.0% | |
| GCGAAAAATGCCAGCCAAAT+GGG | - | chr3_4:41128714-41128733 | Msa0500630:intron | 45.0% | |
| ACTAACGGAGTCTGCATTCA+GGG | + | chr3_4:41128893-41128912 | None:intergenic | 45.0% | |
| ! | TGACTACTCTTTTCCCACTC+AGG | - | chr3_4:41129024-41129043 | Msa0500630:intron | 45.0% |
| ! | GACTACTCTTTTCCCACTCA+GGG | - | chr3_4:41129025-41129044 | Msa0500630:intron | 45.0% |
| ! | AGTCACTTTAGTCCCTGAGT+GGG | + | chr3_4:41129040-41129059 | None:intergenic | 45.0% |
| ! | TAGTCACTTTAGTCCCTGAG+TGG | + | chr3_4:41129041-41129060 | None:intergenic | 45.0% |
| ! | GCTGTTGTAACTGGAAGCAT+TGG | + | chr3_4:41129445-41129464 | None:intergenic | 45.0% |
| CACATAATTCTCGGTCATCC+TGG | + | chr3_4:41129467-41129486 | None:intergenic | 45.0% | |
| ATTCTCTTCGTCTGAACTCG+AGG | + | chr3_4:41129589-41129608 | None:intergenic | 45.0% | |
| AAAGCAGTTACTGCATGAGC+AGG | - | chr3_4:41129929-41129948 | Msa0500630:intron | 45.0% | |
| ATACCAGCTTTCTTACCAGG+GGG | + | chr3_4:41130011-41130030 | None:intergenic | 45.0% | |
| GTCATAGCTGTTGACCAAGT+TGG | - | chr3_4:41130580-41130599 | Msa0500630:intron | 45.0% | |
| ACAAGCAACTCTTCATCTGG+TGG | - | chr3_4:41130631-41130650 | Msa0500630:intron | 45.0% | |
| ACTCTTCATCTGGTGGAAAC+TGG | - | chr3_4:41130638-41130657 | Msa0500630:intron | 45.0% | |
| CTGGTGGAAACTGGAGAATT+TGG | - | chr3_4:41130647-41130666 | Msa0500630:intron | 45.0% | |
| TCTAGATCCTGATCTGCTCA+AGG | + | chr3_4:41130680-41130699 | None:intergenic | 45.0% | |
| ! | GCATCGTTGAATCTGAAGCA+AGG | - | chr3_4:41130853-41130872 | Msa0500630:intron | 45.0% |
| TGCAGTTCAATGCCACCAAT+TGG | - | chr3_4:41131497-41131516 | Msa0500630:intron | 45.0% | |
| TCCTACAGGTCAGATGTTCT+TGG | - | chr3_4:41131782-41131801 | Msa0500630:intron | 45.0% | |
| CCTTGACTGCGGAGAATAAA+TGG | + | chr3_4:41131856-41131875 | None:intergenic | 45.0% | |
| CCATTTATTCTCCGCAGTCA+AGG | - | chr3_4:41131853-41131872 | Msa0500630:intron | 45.0% | |
| !! | GAGCACTGAGAAAAAGCAGT+TGG | + | chr3_4:41132245-41132264 | None:intergenic | 45.0% |
| ! | GGATGGCAAAGTTTTACCAG+AGG | - | chr3_4:41132425-41132444 | Msa0500630:CDS | 45.0% |
| GAAATAACAACAGGACCCTC+TGG | + | chr3_4:41132444-41132463 | None:intergenic | 45.0% | |
| AGAGAGGGAAAAAGTCCATC+GGG | + | chr3_4:41132468-41132487 | None:intergenic | 45.0% | |
| TTTCCCTCTCTATACCGTGA+AGG | - | chr3_4:41132477-41132496 | Msa0500630:CDS | 45.0% | |
| TTGCCTTCACGGTATAGAGA+GGG | + | chr3_4:41132483-41132502 | None:intergenic | 45.0% | |
| ATTGCCTTCACGGTATAGAG+AGG | + | chr3_4:41132484-41132503 | None:intergenic | 45.0% | |
| ATGTGTGAGTGATGGTCACT+TGG | - | chr3_4:41132937-41132956 | Msa0500630:intron | 45.0% | |
| !! | TAGAACGGATTGCAATCGGA+AGG | + | chr3_4:41133518-41133537 | None:intergenic | 45.0% |
| GATTGCAATCCGTTCTATGC+TGG | - | chr3_4:41133521-41133540 | Msa0500630:intron | 45.0% | |
| CTTAAGGTTGGAATCCCGTT+GGG | - | chr3_4:41133578-41133597 | Msa0500630:intron | 45.0% | |
| TCTATGCATGCACTCGTGAA+TGG | - | chr3_4:41133761-41133780 | Msa0500630:CDS | 45.0% | |
| TGCTGAACAATGATTGCAGG+AGG | - | chr3_4:41134061-41134080 | Msa0500630:CDS | 45.0% | |
| ATCCAGGACCAAGGTTATTC+AGG | + | chr3_4:41134160-41134179 | None:intergenic | 45.0% | |
| ! | GGGAACAACCTTTTCTGTTG+TGG | - | chr3_4:41134426-41134445 | Msa0500630:exon | 45.0% |
| !! | CATATGGCTTTGGTGGTCAT+GGG | + | chr3_4:41134577-41134596 | None:intergenic | 45.0% |
| CTTGGGATTCCATATGGCTT+TGG | + | chr3_4:41134587-41134606 | None:intergenic | 45.0% | |
| !!! | TTATTTTGAATATTAAATAA+TGG | + | chr3_4:41133864-41133883 | None:intergenic | 5.0% |
| ATTAGTGAGGATGCAAGCGG+TGG | - | chr3_4:41127610-41127629 | Msa0500630:three_prime_UTR | 50.0% | |
| TTAGTGAGGATGCAAGCGGT+GGG | - | chr3_4:41127611-41127630 | Msa0500630:three_prime_UTR | 50.0% | |
| CAAGGCGTATACACCGTTTC+CGG | - | chr3_4:41127656-41127675 | Msa0500630:three_prime_UTR | 50.0% | |
| TGGATGAAAGGGACCGGAAA+CGG | + | chr3_4:41127672-41127691 | None:intergenic | 50.0% | |
| TCCGGTCCCTTTCATCCATT+CGG | - | chr3_4:41127674-41127693 | Msa0500630:three_prime_UTR | 50.0% | |
| ACCGAATGGATGAAAGGGAC+CGG | + | chr3_4:41127678-41127697 | None:intergenic | 50.0% | |
| TCACCATGGTACGTTCGGTT+TGG | - | chr3_4:41127749-41127768 | Msa0500630:intron | 50.0% | |
| TCCGAGGATGGGAAGATTGT+AGG | - | chr3_4:41127983-41128002 | Msa0500630:intron | 50.0% | |
| CCCTACAATCTTCCCATCCT+CGG | + | chr3_4:41127987-41128006 | None:intergenic | 50.0% | |
| CCGAGGATGGGAAGATTGTA+GGG | - | chr3_4:41127984-41128003 | Msa0500630:intron | 50.0% | |
| AGGATGGGAAGATTGTAGGG+AGG | - | chr3_4:41127987-41128006 | Msa0500630:intron | 50.0% | |
| TTTGGGAGAAGGTCTGTGAG+TGG | - | chr3_4:41128046-41128065 | Msa0500630:intron | 50.0% | |
| TGGTGATCATGCTGTGGTAG+TGG | - | chr3_4:41128153-41128172 | Msa0500630:intron | 50.0% | |
| !! | TGCTGTGGTAGTGGAGAATG+AGG | - | chr3_4:41128162-41128181 | Msa0500630:intron | 50.0% |
| !! | GTGGTAGTGGAGAATGAGGA+TGG | - | chr3_4:41128166-41128185 | Msa0500630:intron | 50.0% |
| !! | TGTGGTAGAGGGTGTTGAAG+AGG | - | chr3_4:41128243-41128262 | Msa0500630:CDS | 50.0% |
| !! | GTGGTAGAGGGTGTTGAAGA+GGG | - | chr3_4:41128244-41128263 | Msa0500630:CDS | 50.0% |
| GACTAACGGAGTCTGCATTC+AGG | + | chr3_4:41128894-41128913 | None:intergenic | 50.0% | |
| CTTCAGGGTACGGAAACTGA+GGG | - | chr3_4:41129234-41129253 | Msa0500630:CDS | 50.0% | |
| TGCTTCCAGTTACAACAGCC+AGG | - | chr3_4:41129446-41129465 | Msa0500630:intron | 50.0% | |
| GTCATCCTGGCTGTTGTAAC+TGG | + | chr3_4:41129454-41129473 | None:intergenic | 50.0% | |
| TCAACTCCACCACACTCTCT+TGG | - | chr3_4:41129525-41129544 | Msa0500630:intron | 50.0% | |
| ! | CAATCACCAAGAGAGTGTGG+TGG | + | chr3_4:41129534-41129553 | None:intergenic | 50.0% |
| TCTTCGTCTGAACTCGAGGA+CGG | + | chr3_4:41129585-41129604 | None:intergenic | 50.0% | |
| CCGCAGCATCCTCATTTCTA+GGG | + | chr3_4:41129755-41129774 | None:intergenic | 50.0% | |
| CCCTAGAAATGAGGATGCTG+CGG | - | chr3_4:41129752-41129771 | Msa0500630:CDS | 50.0% | |
| CCTAGAAATGAGGATGCTGC+GGG | - | chr3_4:41129753-41129772 | Msa0500630:CDS | 50.0% | |
| CTAGAAATGAGGATGCTGCG+GGG | - | chr3_4:41129754-41129773 | Msa0500630:CDS | 50.0% | |
| TAGAAATGAGGATGCTGCGG+GGG | - | chr3_4:41129755-41129774 | Msa0500630:CDS | 50.0% | |
| CAGTTACTGCATGAGCAGGA+AGG | - | chr3_4:41129933-41129952 | Msa0500630:intron | 50.0% | |
| TACCAGCTTTCTTACCAGGG+GGG | + | chr3_4:41130010-41130029 | None:intergenic | 50.0% | |
| CCTGATCTGCTCAAGGAGAA+AGG | + | chr3_4:41130673-41130692 | None:intergenic | 50.0% | |
| CCTTTCTCCTTGAGCAGATC+AGG | - | chr3_4:41130670-41130689 | Msa0500630:intron | 50.0% | |
| ! | CGTTGAATCTGAAGCAAGGG+AGG | - | chr3_4:41130857-41130876 | Msa0500630:intron | 50.0% |
| TCGTATCGTGATCTCGGATG+TGG | - | chr3_4:41131089-41131108 | Msa0500630:intron | 50.0% | |
| ATCGTGATCTCGGATGTGGA+TGG | - | chr3_4:41131093-41131112 | Msa0500630:intron | 50.0% | |
| GCCAAGAACATCTGACCTGT+AGG | + | chr3_4:41131786-41131805 | None:intergenic | 50.0% | |
| TCTTGGCCAGTTCATGCCTT+TGG | - | chr3_4:41131799-41131818 | Msa0500630:intron | 50.0% | |
| ! | CACCAACCAAAGGCATGAAC+TGG | + | chr3_4:41131808-41131827 | None:intergenic | 50.0% |
| !! | TGCCTTTGGTTGGTGTTGAC+TGG | - | chr3_4:41131813-41131832 | Msa0500630:intron | 50.0% |
| GACCAGTCAACACCAACCAA+AGG | + | chr3_4:41131818-41131837 | None:intergenic | 50.0% | |
| CTATAGACGGGGTACAGTAC+AGG | + | chr3_4:41132135-41132154 | None:intergenic | 50.0% | |
| CCATCGGGGGAAATAACAAC+AGG | + | chr3_4:41132453-41132472 | None:intergenic | 50.0% | |
| !! | CCTGTTGTTATTTCCCCCGA+TGG | - | chr3_4:41132450-41132469 | Msa0500630:CDS | 50.0% |
| AGAGGGAAAAAGTCCATCGG+GGG | + | chr3_4:41132466-41132485 | None:intergenic | 50.0% | |
| GAGAGGGAAAAAGTCCATCG+GGG | + | chr3_4:41132467-41132486 | None:intergenic | 50.0% | |
| CCAACGGGATTCCAACCTTA+AGG | + | chr3_4:41133580-41133599 | None:intergenic | 50.0% | |
| CCTTAAGGTTGGAATCCCGT+TGG | - | chr3_4:41133577-41133596 | Msa0500630:intron | 50.0% | |
| !! | TGCTCAGAAGTGCTTGTTGC+GGG | + | chr3_4:41133794-41133813 | None:intergenic | 50.0% |
| !! | CTGCTCAGAAGTGCTTGTTG+CGG | + | chr3_4:41133795-41133814 | None:intergenic | 50.0% |
| CCTATCCATATCCAGGACCA+AGG | + | chr3_4:41134169-41134188 | None:intergenic | 50.0% | |
| CCTTGGTCCTGGATATGGAT+AGG | - | chr3_4:41134166-41134185 | Msa0500630:CDS | 50.0% | |
| TCCTGGATATGGATAGGTGC+AGG | - | chr3_4:41134172-41134191 | Msa0500630:CDS | 50.0% | |
| GTAACCGTGTGATCGTGTCA+TGG | - | chr3_4:41134329-41134348 | Msa0500630:CDS | 50.0% | |
| ACCACCATGACACGATCACA+CGG | + | chr3_4:41134336-41134355 | None:intergenic | 50.0% | |
| !! | CCATATGGCTTTGGTGGTCA+TGG | + | chr3_4:41134578-41134597 | None:intergenic | 50.0% |
| CCATGACCACCAAAGCCATA+TGG | - | chr3_4:41134575-41134594 | Msa0500630:five_prime_UTR | 50.0% | |
| !! | GGGATTCCATATGGCTTTGG+TGG | + | chr3_4:41134584-41134603 | None:intergenic | 50.0% |
| TAGTGAGGATGCAAGCGGTG+GGG | - | chr3_4:41127612-41127631 | Msa0500630:three_prime_UTR | 55.0% | |
| ATGCAAGCGGTGGGGAGATT+AGG | - | chr3_4:41127620-41127639 | Msa0500630:three_prime_UTR | 55.0% | |
| TGCAAGCGGTGGGGAGATTA+GGG | - | chr3_4:41127621-41127640 | Msa0500630:three_prime_UTR | 55.0% | |
| GGTCCCTTTCATCCATTCGG+TGG | - | chr3_4:41127677-41127696 | Msa0500630:three_prime_UTR | 55.0% | |
| GCGCCACCGAATGGATGAAA+GGG | + | chr3_4:41127683-41127702 | None:intergenic | 55.0% | |
| TGCTCATGGGGAAACTGGTG+AGG | - | chr3_4:41128327-41128346 | Msa0500630:intron | 55.0% | |
| ! | CAGCCAAATGGGCTTGACGT+GGG | - | chr3_4:41128725-41128744 | Msa0500630:intron | 55.0% |
| CCTCAGTTTCCGTACCCTGA+AGG | + | chr3_4:41129236-41129255 | None:intergenic | 55.0% | |
| CCTTCAGGGTACGGAAACTG+AGG | - | chr3_4:41129233-41129252 | Msa0500630:CDS | 55.0% | |
| CCCGCAGCATCCTCATTTCT+AGG | + | chr3_4:41129756-41129775 | None:intergenic | 55.0% | |
| TCACTGGACTCGGCATTTCC+TGG | - | chr3_4:41129864-41129883 | Msa0500630:intron | 55.0% | |
| AGCTATGCTGGGGAAACAGC+AGG | - | chr3_4:41130906-41130925 | Msa0500630:intron | 55.0% | |
| GGCCAGTTCATGCCTTTGGT+TGG | - | chr3_4:41131803-41131822 | Msa0500630:intron | 55.0% | |
| !! | GGTGTTGACTGGTCACAGAC+TGG | - | chr3_4:41131824-41131843 | Msa0500630:intron | 55.0% |
| !! | GCTCAGAAGTGCTTGTTGCG+GGG | + | chr3_4:41133793-41133812 | None:intergenic | 55.0% |
| CGCAACAAGCACTTCTGAGC+AGG | - | chr3_4:41133793-41133812 | Msa0500630:CDS | 55.0% | |
| GGCCTGAATAACCTTGGTCC+TGG | - | chr3_4:41134155-41134174 | Msa0500630:CDS | 55.0% | |
| GCCTGCACCTATCCATATCC+AGG | + | chr3_4:41134176-41134195 | None:intergenic | 55.0% | |
| ACCGTGTGATCGTGTCATGG+TGG | - | chr3_4:41134332-41134351 | Msa0500630:CDS | 55.0% | |
| GGCGCCACCGAATGGATGAA+AGG | + | chr3_4:41127684-41127703 | None:intergenic | 60.0% | |
| ATATCGACGGCGCCACCGAA+TGG | + | chr3_4:41127692-41127711 | None:intergenic | 60.0% | |
| CCACGTCAAGCCCATTTGGC+TGG | + | chr3_4:41128727-41128746 | None:intergenic | 60.0% | |
| ! | CCAGCCAAATGGGCTTGACG+TGG | - | chr3_4:41128724-41128743 | Msa0500630:intron | 60.0% |
| AGGCCCACGTCAAGCCCATT+TGG | + | chr3_4:41128731-41128750 | None:intergenic | 60.0% | |
| AGGATGCTGCGGGGGAAGTT+GGG | - | chr3_4:41129763-41129782 | Msa0500630:CDS | 60.0% | |
| GGGGAAGTTGGGCAGCATAC+AGG | - | chr3_4:41129774-41129793 | Msa0500630:CDS | 60.0% | |
| ACTACGCTGAATCTCCCCCC+TGG | - | chr3_4:41129993-41130012 | Msa0500630:intron | 60.0% | |
| CTCCCCCCTGGTAAGAAAGC+TGG | - | chr3_4:41130005-41130024 | Msa0500630:intron | 60.0% | |
| ! | AGCATCTGGGGTCGGATTCC+AGG | - | chr3_4:41132897-41132916 | Msa0500630:intron | 60.0% |
| ! | TGCTGGTCGTGGGAGAGTAC+CGG | - | chr3_4:41133890-41133909 | Msa0500630:CDS | 60.0% |
| !! | GAGGTGGTGGGAGGGAGACA+GGG | + | chr3_4:41127423-41127442 | None:intergenic | 65.0% |
| !! | TGAGGTGGTGGGAGGGAGAC+AGG | + | chr3_4:41127424-41127443 | None:intergenic | 65.0% |
| GAGGATGCTGCGGGGGAAGT+TGG | - | chr3_4:41129762-41129781 | Msa0500630:CDS | 65.0% | |
| !! | GCTGGTCGTGGGAGAGTACC+GGG | - | chr3_4:41133891-41133910 | Msa0500630:CDS | 65.0% |
| !! | CTGGTCGTGGGAGAGTACCG+GGG | - | chr3_4:41133892-41133911 | Msa0500630:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 41127277 | 41134771 | 41127277 | ID=Msa0500630;Name=Msa0500630 |
| chr3_4 | mRNA | 41127277 | 41134771 | 41127277 | ID=Msa0500630-mRNA-1;Parent=Msa0500630;Name=Msa0500630-mRNA-1;_AED=0.06;_eAED=0.06;_QI=343|0.90|0.91|1|0.90|0.83|12|542|837 |
| chr3_4 | exon | 41127277 | 41127735 | 41127277 | ID=Msa0500630-mRNA-1:exon:8514;Parent=Msa0500630-mRNA-1 |
| chr3_4 | exon | 41127829 | 41127968 | 41127829 | ID=Msa0500630-mRNA-1:exon:8513;Parent=Msa0500630-mRNA-1 |
| chr3_4 | exon | 41128234 | 41128332 | 41128234 | ID=Msa0500630-mRNA-1:exon:8512;Parent=Msa0500630-mRNA-1 |
| chr3_4 | exon | 41128423 | 41128551 | 41128423 | ID=Msa0500630-mRNA-1:exon:8511;Parent=Msa0500630-mRNA-1 |
| chr3_4 | exon | 41129222 | 41129265 | 41129222 | ID=Msa0500630-mRNA-1:exon:8510;Parent=Msa0500630-mRNA-1 |
| chr3_4 | exon | 41129550 | 41129622 | 41129550 | ID=Msa0500630-mRNA-1:exon:8509;Parent=Msa0500630-mRNA-1 |
| chr3_4 | exon | 41129731 | 41129817 | 41129731 | ID=Msa0500630-mRNA-1:exon:8508;Parent=Msa0500630-mRNA-1 |
| chr3_4 | exon | 41130174 | 41130258 | 41130174 | ID=Msa0500630-mRNA-1:exon:8507;Parent=Msa0500630-mRNA-1 |
| chr3_4 | exon | 41130921 | 41130994 | 41130921 | ID=Msa0500630-mRNA-1:exon:8506;Parent=Msa0500630-mRNA-1 |
| chr3_4 | exon | 41131121 | 41131428 | 41131121 | ID=Msa0500630-mRNA-1:exon:8505;Parent=Msa0500630-mRNA-1 |
| chr3_4 | exon | 41132022 | 41132808 | 41132022 | ID=Msa0500630-mRNA-1:exon:8504;Parent=Msa0500630-mRNA-1 |
| chr3_4 | exon | 41133658 | 41134771 | 41133658 | ID=Msa0500630-mRNA-1:exon:8503;Parent=Msa0500630-mRNA-1 |
| chr3_4 | five_prime_UTR | 41134429 | 41134771 | 41134429 | ID=Msa0500630-mRNA-1:five_prime_utr;Parent=Msa0500630-mRNA-1 |
| chr3_4 | CDS | 41133658 | 41134428 | 41133658 | ID=Msa0500630-mRNA-1:cds;Parent=Msa0500630-mRNA-1 |
| chr3_4 | CDS | 41132022 | 41132808 | 41132022 | ID=Msa0500630-mRNA-1:cds;Parent=Msa0500630-mRNA-1 |
| chr3_4 | CDS | 41131121 | 41131428 | 41131121 | ID=Msa0500630-mRNA-1:cds;Parent=Msa0500630-mRNA-1 |
| chr3_4 | CDS | 41130921 | 41130994 | 41130921 | ID=Msa0500630-mRNA-1:cds;Parent=Msa0500630-mRNA-1 |
| chr3_4 | CDS | 41130174 | 41130258 | 41130174 | ID=Msa0500630-mRNA-1:cds;Parent=Msa0500630-mRNA-1 |
| chr3_4 | CDS | 41129731 | 41129817 | 41129731 | ID=Msa0500630-mRNA-1:cds;Parent=Msa0500630-mRNA-1 |
| chr3_4 | CDS | 41129550 | 41129622 | 41129550 | ID=Msa0500630-mRNA-1:cds;Parent=Msa0500630-mRNA-1 |
| chr3_4 | CDS | 41129222 | 41129265 | 41129222 | ID=Msa0500630-mRNA-1:cds;Parent=Msa0500630-mRNA-1 |
| chr3_4 | CDS | 41128423 | 41128551 | 41128423 | ID=Msa0500630-mRNA-1:cds;Parent=Msa0500630-mRNA-1 |
| chr3_4 | CDS | 41128234 | 41128332 | 41128234 | ID=Msa0500630-mRNA-1:cds;Parent=Msa0500630-mRNA-1 |
| chr3_4 | CDS | 41127912 | 41127968 | 41127912 | ID=Msa0500630-mRNA-1:cds;Parent=Msa0500630-mRNA-1 |
| chr3_4 | three_prime_UTR | 41127829 | 41127911 | 41127829 | ID=Msa0500630-mRNA-1:three_prime_utr;Parent=Msa0500630-mRNA-1 |
| chr3_4 | three_prime_UTR | 41127277 | 41127735 | 41127277 | ID=Msa0500630-mRNA-1:three_prime_utr;Parent=Msa0500630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
