Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0355550 | XP_013459264.1 | 92.739 | 303 | 22 | 0 | 1 | 303 | 1 | 303 | 0.0 | 585 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0355550 | sp|Q9FLJ2|NC100_ARATH | 56.686 | 344 | 100 | 6 | 1 | 303 | 1 | 336 | 7.36e-125 | 363 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0355550 | A0A072V531 | 92.739 | 303 | 22 | 0 | 1 | 303 | 1 | 303 | 0.0 | 585 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0355550 | TF | NAC |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030700 | Msa0355550 | 0.827935 | 1.188689e-54 | -8.615850e-47 |
| Msa0042490 | Msa0355550 | -0.804930 | 1.705575e-49 | -8.615850e-47 |
| Msa0043740 | Msa0355550 | 0.807607 | 4.654231e-50 | -8.615850e-47 |
| Msa0051960 | Msa0355550 | 0.831052 | 2.077436e-55 | -8.615850e-47 |
| Msa0078120 | Msa0355550 | 0.824307 | 8.666091e-54 | -8.615850e-47 |
| Msa0090090 | Msa0355550 | 0.827868 | 1.233556e-54 | -8.615850e-47 |
| Msa0094710 | Msa0355550 | 0.840283 | 9.545890e-58 | -8.615850e-47 |
| Msa0101860 | Msa0355550 | 0.803399 | 3.551467e-49 | -8.615850e-47 |
| Msa0101960 | Msa0355550 | 0.842998 | 1.835919e-58 | -8.615850e-47 |
| Msa0114790 | Msa0355550 | 0.809752 | 1.620040e-50 | -8.615850e-47 |
| Msa0129770 | Msa0355550 | 0.803140 | 4.018438e-49 | -8.615850e-47 |
| Msa0137560 | Msa0355550 | 0.827531 | 1.485991e-54 | -8.615850e-47 |
| Msa0198470 | Msa0355550 | 0.822077 | 2.872546e-53 | -8.615850e-47 |
| Msa0206450 | Msa0355550 | 0.818781 | 1.638793e-52 | -8.615850e-47 |
| Msa0257900 | Msa0355550 | 0.814741 | 1.320063e-51 | -8.615850e-47 |
| Msa0299530 | Msa0355550 | -0.801483 | 8.815883e-49 | -8.615850e-47 |
| Msa0302560 | Msa0355550 | 0.823817 | 1.129226e-53 | -8.615850e-47 |
| Msa0306000 | Msa0355550 | 0.811001 | 8.709009e-51 | -8.615850e-47 |
| Msa0307420 | Msa0355550 | 0.815783 | 7.746916e-52 | -8.615850e-47 |
| Msa0339920 | Msa0355550 | 0.854460 | 1.213310e-61 | -8.615850e-47 |
| Msa0345890 | Msa0355550 | 0.810213 | 1.289243e-50 | -8.615850e-47 |
| Msa0355550 | Msa0388010 | 0.818758 | 1.658572e-52 | -8.615850e-47 |
| Msa0355550 | Msa0388070 | 0.812617 | 3.873270e-51 | -8.615850e-47 |
| Msa0355550 | Msa0403470 | -0.812354 | 4.423310e-51 | -8.615850e-47 |
| Msa0355550 | Msa0419060 | 0.809454 | 1.877653e-50 | -8.615850e-47 |
| Msa0355550 | Msa0428200 | 0.800170 | 1.634087e-48 | -8.615850e-47 |
| Msa0355550 | Msa0433790 | 0.810206 | 1.293649e-50 | -8.615850e-47 |
| Msa0355550 | Msa0490320 | 0.802466 | 5.536914e-49 | -8.615850e-47 |
| Msa0355550 | Msa0497120 | 0.891867 | 2.683651e-74 | -8.615850e-47 |
| Msa0355550 | Msa0500630 | 0.801020 | 1.096394e-48 | -8.615850e-47 |
| Msa0355550 | Msa0510570 | 0.806485 | 8.039613e-50 | -8.615850e-47 |
| Msa0355550 | Msa0517270 | 0.837790 | 4.222485e-57 | -8.615850e-47 |
| Msa0355550 | Msa0527950 | 0.812161 | 4.872569e-51 | -8.615850e-47 |
| Msa0355550 | Msa0534610 | 0.805060 | 1.601579e-49 | -8.615850e-47 |
| Msa0355550 | Msa0545050 | 0.835571 | 1.552754e-56 | -8.615850e-47 |
| Msa0355550 | Msa0563860 | 0.819083 | 1.399300e-52 | -8.615850e-47 |
| Msa0355550 | Msa0577490 | 0.819643 | 1.043084e-52 | -8.615850e-47 |
| Msa0355550 | Msa0584600 | 0.814416 | 1.557601e-51 | -8.615850e-47 |
| Msa0355550 | Msa0590810 | 0.814391 | 1.577860e-51 | -8.615850e-47 |
| Msa0355550 | Msa0600590 | 0.830053 | 3.646316e-55 | -8.615850e-47 |
| Msa0355550 | Msa0619310 | 0.817599 | 3.032715e-52 | -8.615850e-47 |
| Msa0355550 | Msa0635270 | 0.852163 | 5.527291e-61 | -8.615850e-47 |
| Msa0355550 | Msa0641130 | 0.846030 | 2.804714e-59 | -8.615850e-47 |
| Msa0355550 | Msa0650560 | 0.814495 | 1.496750e-51 | -8.615850e-47 |
| Msa0355550 | Msa0658190 | 0.802058 | 6.718471e-49 | -8.615850e-47 |
| Msa0355550 | Msa0662580 | 0.816049 | 6.756750e-52 | -8.615850e-47 |
| Msa0355550 | Msa0704680 | 0.817897 | 2.597662e-52 | -8.615850e-47 |
| Msa0355550 | Msa0744640 | 0.819834 | 9.432181e-53 | -8.615850e-47 |
| Msa0355550 | Msa0772280 | 0.808220 | 3.446261e-50 | -8.615850e-47 |
| Msa0355550 | Msa0800490 | 0.811106 | 8.265395e-51 | -8.615850e-47 |
| Msa0355550 | Msa0807020 | 0.800751 | 1.244081e-48 | -8.615850e-47 |
| Msa0355550 | Msa0830030 | 0.824395 | 8.260583e-54 | -8.615850e-47 |
| Msa0355550 | Msa0841730 | 0.819334 | 1.226812e-52 | -8.615850e-47 |
| Msa0355550 | Msa0862620 | 0.801047 | 1.082694e-48 | -8.615850e-47 |
| Msa0355550 | Msa0863990 | 0.806577 | 7.688859e-50 | -8.615850e-47 |
| Msa0355550 | Msa0864820 | -0.807687 | 4.475754e-50 | -8.615850e-47 |
| Msa0355550 | Msa0870510 | 0.837977 | 3.778902e-57 | -8.615850e-47 |
| Msa0355550 | Msa0879930 | 0.822419 | 2.393159e-53 | -8.615850e-47 |
| Msa0355550 | Msa0881720 | 0.801244 | 9.864787e-49 | -8.615850e-47 |
| Msa0355550 | Msa0896530 | 0.815218 | 1.034489e-51 | -8.615850e-47 |
| Msa0355550 | Msa0905570 | 0.817179 | 3.770369e-52 | -8.615850e-47 |
| Msa0355550 | Msa0922190 | 0.812774 | 3.579045e-51 | -8.615850e-47 |
| Msa0355550 | Msa0968470 | -0.825313 | 5.019271e-54 | -8.615850e-47 |
| Msa0355550 | Msa0996380 | 0.804922 | 1.712200e-49 | -8.615850e-47 |
| Msa0355550 | Msa1011250 | 0.842839 | 2.023879e-58 | -8.615850e-47 |
| Msa0355550 | Msa1030810 | 0.831098 | 2.023060e-55 | -8.615850e-47 |
| Msa0355550 | Msa1031460 | 0.828436 | 9.000811e-55 | -8.615850e-47 |
| Msa0355550 | Msa1035000 | 0.805624 | 1.219990e-49 | -8.615850e-47 |
| Msa0355550 | Msa1069890 | 0.859493 | 3.980550e-63 | -8.615850e-47 |
| Msa0355550 | Msa1070540 | 0.819511 | 1.117736e-52 | -8.615850e-47 |
| Msa0355550 | Msa1075040 | 0.818351 | 2.051175e-52 | -8.615850e-47 |
| Msa0355550 | Msa1084890 | 0.808960 | 2.395209e-50 | -8.615850e-47 |
| Msa0355550 | Msa1101240 | 0.825355 | 4.904866e-54 | -8.615850e-47 |
| Msa0355550 | Msa1116840 | 0.803898 | 2.798331e-49 | -8.615850e-47 |
| Msa0355550 | Msa1119920 | 0.844481 | 7.360360e-59 | -8.615850e-47 |
| Msa0355550 | Msa1132980 | 0.803518 | 3.354827e-49 | -8.615850e-47 |
| Msa0355550 | Msa1137210 | 0.826695 | 2.355260e-54 | -8.615850e-47 |
| Msa0355550 | Msa1140630 | 0.838618 | 2.583757e-57 | -8.615850e-47 |
| Msa0355550 | Msa1157670 | 0.846990 | 1.534955e-59 | -8.615850e-47 |
| Msa0355550 | Msa1162870 | 0.811538 | 6.660841e-51 | -8.615850e-47 |
| Msa0355550 | Msa1168640 | 0.806895 | 6.585357e-50 | -8.615850e-47 |
| Msa0355550 | Msa1175100 | 0.810714 | 1.004761e-50 | -8.615850e-47 |
| Msa0355550 | Msa1208450 | -0.810467 | 1.136139e-50 | -8.615850e-47 |
| Msa0355550 | Msa1208990 | 0.840270 | 9.619365e-58 | -8.615850e-47 |
| Msa0355550 | Msa1212130 | 0.803008 | 4.279466e-49 | -8.615850e-47 |
| Msa0355550 | Msa1237890 | 0.814708 | 1.342369e-51 | -8.615850e-47 |
| Msa0355550 | Msa1238600 | 0.801717 | 7.891646e-49 | -8.615850e-47 |
| Msa0355550 | Msa1239620 | 0.802572 | 5.263740e-49 | -8.615850e-47 |
| Msa0355550 | Msa1255210 | 0.820012 | 8.586437e-53 | -8.615850e-47 |
| Msa0355550 | Msa1256060 | 0.885455 | 8.013852e-72 | -8.615850e-47 |
| Msa0355550 | Msa1259860 | 0.815981 | 6.994847e-52 | -8.615850e-47 |
| Msa0355550 | Msa1281660 | 0.812062 | 5.121949e-51 | -8.615850e-47 |
| Msa0355550 | Msa1289050 | 0.801104 | 1.053675e-48 | -8.615850e-47 |
| Msa0355550 | Msa1289090 | 0.807172 | 5.754988e-50 | -8.615850e-47 |
| Msa0355550 | Msa1295650 | 0.811912 | 5.521391e-51 | -8.615850e-47 |
| Msa0355550 | Msa1296240 | 0.834959 | 2.216359e-56 | -8.615850e-47 |
| Msa0355550 | Msa1298390 | -0.828332 | 9.533629e-55 | -8.615850e-47 |
| Msa0355550 | Msa1306830 | 0.841044 | 6.032335e-58 | -8.615850e-47 |
| Msa0355550 | Msa1306960 | 0.812180 | 4.826801e-51 | -8.615850e-47 |
| Msa0355550 | Msa1315480 | 0.844539 | 7.101926e-59 | -8.615850e-47 |
| Msa0355550 | Msa1318550 | 0.810300 | 1.234175e-50 | -8.615850e-47 |
| Msa0355550 | Msa1389170 | 0.870224 | 1.714484e-66 | -8.615850e-47 |
| Msa0355550 | Msa1395110 | 0.808462 | 3.061047e-50 | -8.615850e-47 |
| Msa0355550 | Msa1395250 | 0.807448 | 5.028862e-50 | -8.615850e-47 |
| Msa0355550 | Msa1398900 | 0.805659 | 1.199879e-49 | -8.615850e-47 |
| Msa0355550 | Msa1407880 | 0.806733 | 7.128127e-50 | -8.615850e-47 |
| Msa0355550 | Msa1420940 | 0.807935 | 3.963013e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0355550 | MtrunA17_Chr3g0091921 | 92.739 | 303 | 22 | 0 | 1 | 303 | 1 | 303 | 0.0 | 585 |
| Msa0355550 | MtrunA17_Chr4g0060931 | 67.492 | 323 | 79 | 7 | 1 | 302 | 1 | 318 | 2.15e-143 | 408 |
| Msa0355550 | MtrunA17_Chr6g0453451 | 50.769 | 325 | 130 | 7 | 1 | 303 | 5 | 321 | 1.39e-100 | 298 |
| Msa0355550 | MtrunA17_Chr7g0253011 | 66.204 | 216 | 64 | 6 | 1 | 208 | 1 | 215 | 1.01e-92 | 280 |
| Msa0355550 | MtrunA17_Chr6g0461661 | 64.734 | 207 | 67 | 5 | 6 | 207 | 8 | 213 | 2.45e-89 | 271 |
| Msa0355550 | MtrunA17_Chr6g0484441 | 58.442 | 231 | 82 | 5 | 16 | 245 | 5 | 222 | 4.72e-88 | 266 |
| Msa0355550 | MtrunA17_Chr2g0316971 | 64.352 | 216 | 55 | 3 | 16 | 209 | 23 | 238 | 2.35e-86 | 263 |
| Msa0355550 | MtrunA17_Chr7g0217721 | 57.741 | 239 | 79 | 4 | 2 | 218 | 5 | 243 | 1.60e-83 | 255 |
| Msa0355550 | MtrunA17_Chr3g0139331 | 59.709 | 206 | 63 | 5 | 16 | 218 | 11 | 199 | 5.73e-77 | 238 |
| Msa0355550 | MtrunA17_Chr1g0147421 | 67.273 | 165 | 47 | 3 | 11 | 172 | 22 | 182 | 9.39e-76 | 236 |
| Msa0355550 | MtrunA17_Chr7g0217711 | 72.667 | 150 | 40 | 1 | 2 | 150 | 5 | 154 | 2.90e-73 | 223 |
| Msa0355550 | MtrunA17_Chr2g0312321 | 48.523 | 237 | 91 | 8 | 1 | 222 | 1 | 221 | 2.76e-63 | 202 |
| Msa0355550 | MtrunA17_Chr3g0144271 | 67.361 | 144 | 39 | 3 | 6 | 141 | 8 | 151 | 1.25e-61 | 201 |
| Msa0355550 | MtrunA17_Chr4g0056541 | 59.494 | 158 | 55 | 3 | 16 | 169 | 7 | 159 | 8.37e-60 | 195 |
| Msa0355550 | MtrunA17_Chr5g0405211 | 54.819 | 166 | 68 | 3 | 16 | 178 | 8 | 169 | 2.54e-59 | 193 |
| Msa0355550 | MtrunA17_Chr4g0018391 | 57.325 | 157 | 60 | 3 | 16 | 169 | 7 | 159 | 4.63e-59 | 192 |
| Msa0355550 | MtrunA17_Chr2g0318081 | 55.689 | 167 | 72 | 1 | 13 | 179 | 13 | 177 | 9.48e-59 | 192 |
| Msa0355550 | MtrunA17_Chr2g0309331 | 57.595 | 158 | 59 | 3 | 13 | 166 | 7 | 160 | 1.15e-58 | 191 |
| Msa0355550 | MtrunA17_Chr8g0359921 | 48.058 | 206 | 96 | 2 | 13 | 209 | 11 | 214 | 1.67e-58 | 190 |
| Msa0355550 | MtrunA17_Chr4g0017921 | 61.935 | 155 | 49 | 4 | 16 | 166 | 8 | 156 | 1.67e-58 | 191 |
| Msa0355550 | MtrunA17_Chr8g0372121 | 56.051 | 157 | 62 | 3 | 16 | 169 | 6 | 158 | 1.82e-58 | 189 |
| Msa0355550 | MtrunA17_Chr8g0346001 | 54.286 | 175 | 68 | 4 | 2 | 166 | 3 | 175 | 2.15e-58 | 193 |
| Msa0355550 | MtrunA17_Chr5g0398971 | 56.962 | 158 | 61 | 3 | 16 | 169 | 7 | 161 | 2.07e-57 | 188 |
| Msa0355550 | MtrunA17_Chr1g0183741 | 44.344 | 221 | 91 | 6 | 16 | 234 | 10 | 200 | 6.91e-57 | 184 |
| Msa0355550 | MtrunA17_Chr4g0042561 | 55.063 | 158 | 69 | 1 | 16 | 171 | 9 | 166 | 1.54e-56 | 183 |
| Msa0355550 | MtrunA17_Chr7g0252971 | 44.444 | 234 | 113 | 6 | 13 | 230 | 5 | 237 | 1.78e-56 | 185 |
| Msa0355550 | MtrunA17_Chr5g0417791 | 55.484 | 155 | 67 | 1 | 14 | 166 | 1 | 155 | 3.39e-56 | 182 |
| Msa0355550 | MtrunA17_Chr2g0309891 | 56.051 | 157 | 66 | 2 | 14 | 168 | 4 | 159 | 3.72e-56 | 185 |
| Msa0355550 | MtrunA17_Chr7g0263931 | 57.595 | 158 | 63 | 3 | 13 | 166 | 8 | 165 | 4.08e-56 | 184 |
| Msa0355550 | MtrunA17_Chr1g0200561 | 55.195 | 154 | 62 | 3 | 16 | 166 | 19 | 168 | 1.18e-55 | 184 |
| Msa0355550 | MtrunA17_Chr3g0124761 | 50.282 | 177 | 86 | 2 | 13 | 188 | 4 | 179 | 1.64e-55 | 181 |
| Msa0355550 | MtrunA17_Chr6g0481091 | 55.844 | 154 | 64 | 2 | 16 | 167 | 6 | 157 | 7.77e-55 | 178 |
| Msa0355550 | MtrunA17_Chr2g0318101 | 53.704 | 162 | 64 | 4 | 16 | 166 | 15 | 176 | 2.99e-54 | 180 |
| Msa0355550 | MtrunA17_Chr3g0109821 | 57.516 | 153 | 62 | 2 | 16 | 166 | 6 | 157 | 4.99e-54 | 186 |
| Msa0355550 | MtrunA17_Chr7g0261411 | 54.305 | 151 | 61 | 3 | 16 | 164 | 10 | 154 | 6.75e-54 | 177 |
| Msa0355550 | MtrunA17_Chr5g0433781 | 56.209 | 153 | 63 | 3 | 16 | 166 | 6 | 156 | 3.62e-53 | 184 |
| Msa0355550 | MtrunA17_Chr3g0113001 | 61.972 | 142 | 50 | 2 | 65 | 202 | 14 | 155 | 4.76e-53 | 175 |
| Msa0355550 | MtrunA17_Chr8g0361731 | 50.000 | 168 | 74 | 3 | 8 | 166 | 7 | 173 | 6.14e-53 | 177 |
| Msa0355550 | MtrunA17_Chr4g0047841 | 50.000 | 174 | 64 | 3 | 16 | 166 | 15 | 188 | 1.20e-52 | 176 |
| Msa0355550 | MtrunA17_Chr7g0214071 | 50.000 | 176 | 79 | 4 | 7 | 180 | 6 | 174 | 2.97e-52 | 172 |
| Msa0355550 | MtrunA17_Chr5g0417001 | 48.958 | 192 | 84 | 6 | 12 | 193 | 11 | 198 | 8.40e-52 | 175 |
| Msa0355550 | MtrunA17_Chr2g0326361 | 52.500 | 160 | 72 | 3 | 16 | 171 | 14 | 173 | 3.03e-51 | 171 |
| Msa0355550 | MtrunA17_Chr8g0384721 | 54.902 | 153 | 66 | 2 | 16 | 166 | 7 | 158 | 3.08e-51 | 170 |
| Msa0355550 | MtrunA17_Chr3g0130731 | 52.229 | 157 | 73 | 2 | 11 | 166 | 2 | 157 | 6.30e-51 | 169 |
| Msa0355550 | MtrunA17_Chr3g0128151 | 55.346 | 159 | 57 | 3 | 16 | 167 | 22 | 173 | 2.78e-50 | 175 |
| Msa0355550 | MtrunA17_Chr6g0453131 | 50.943 | 159 | 70 | 2 | 16 | 166 | 15 | 173 | 3.67e-50 | 170 |
| Msa0355550 | MtrunA17_Chr5g0400461 | 46.774 | 186 | 83 | 4 | 16 | 192 | 6 | 184 | 5.17e-50 | 168 |
| Msa0355550 | MtrunA17_Chr5g0428991 | 54.430 | 158 | 58 | 3 | 16 | 166 | 25 | 175 | 2.01e-49 | 173 |
| Msa0355550 | MtrunA17_Chr3g0128111 | 46.561 | 189 | 87 | 3 | 19 | 200 | 45 | 226 | 2.77e-49 | 164 |
| Msa0355550 | MtrunA17_Chr4g0054791 | 49.405 | 168 | 78 | 3 | 16 | 178 | 6 | 171 | 9.78e-49 | 165 |
| Msa0355550 | MtrunA17_Chr1g0197361 | 44.954 | 218 | 105 | 8 | 10 | 219 | 2 | 212 | 2.26e-48 | 170 |
| Msa0355550 | MtrunA17_Chr3g0130101 | 50.311 | 161 | 74 | 3 | 15 | 172 | 6 | 163 | 1.51e-47 | 162 |
| Msa0355550 | MtrunA17_Chr5g0442771 | 47.126 | 174 | 81 | 4 | 9 | 172 | 12 | 184 | 1.69e-47 | 161 |
| Msa0355550 | MtrunA17_Chr1g0197351 | 52.795 | 161 | 70 | 2 | 16 | 170 | 42 | 202 | 7.34e-47 | 164 |
| Msa0355550 | MtrunA17_Chr3g0092671 | 53.416 | 161 | 63 | 5 | 18 | 172 | 7 | 161 | 2.15e-46 | 164 |
| Msa0355550 | MtrunA17_Chr2g0311651 | 45.503 | 189 | 83 | 7 | 1 | 173 | 9 | 193 | 3.21e-46 | 158 |
| Msa0355550 | MtrunA17_Chr2g0311661 | 41.951 | 205 | 96 | 7 | 1 | 190 | 9 | 205 | 7.93e-46 | 156 |
| Msa0355550 | MtrunA17_Chr8g0364791 | 47.826 | 161 | 76 | 3 | 16 | 172 | 6 | 162 | 4.69e-45 | 158 |
| Msa0355550 | MtrunA17_Chr4g0076731 | 48.701 | 154 | 72 | 3 | 15 | 166 | 53 | 201 | 6.35e-45 | 157 |
| Msa0355550 | MtrunA17_Chr1g0201021 | 47.399 | 173 | 86 | 3 | 2 | 172 | 6 | 175 | 1.36e-44 | 159 |
| Msa0355550 | MtrunA17_Chr4g0038751 | 45.977 | 174 | 80 | 5 | 1 | 171 | 4 | 166 | 2.19e-43 | 150 |
| Msa0355550 | MtrunA17_Chr8g0384201 | 46.541 | 159 | 81 | 2 | 16 | 172 | 6 | 162 | 2.41e-43 | 154 |
| Msa0355550 | MtrunA17_Chr3g0113031 | 59.542 | 131 | 48 | 3 | 77 | 202 | 1 | 131 | 3.45e-43 | 149 |
| Msa0355550 | MtrunA17_Chr8g0385991 | 43.125 | 160 | 84 | 3 | 16 | 170 | 14 | 171 | 7.99e-38 | 134 |
| Msa0355550 | MtrunA17_Chr8g0345671 | 56.923 | 130 | 48 | 6 | 16 | 139 | 11 | 138 | 1.17e-37 | 137 |
| Msa0355550 | MtrunA17_Chr3g0131911 | 42.593 | 162 | 83 | 4 | 16 | 169 | 14 | 173 | 1.08e-36 | 131 |
| Msa0355550 | MtrunA17_Chr8g0345691 | 48.387 | 155 | 65 | 8 | 16 | 164 | 12 | 157 | 5.61e-35 | 130 |
| Msa0355550 | MtrunA17_Chr4g0026141 | 42.500 | 160 | 79 | 5 | 15 | 164 | 4 | 160 | 1.45e-34 | 126 |
| Msa0355550 | MtrunA17_Chr2g0321741 | 40.123 | 162 | 77 | 4 | 36 | 196 | 12 | 154 | 2.02e-33 | 125 |
| Msa0355550 | MtrunA17_Chr2g0321631 | 38.462 | 156 | 88 | 4 | 17 | 164 | 5 | 160 | 4.66e-32 | 119 |
| Msa0355550 | MtrunA17_Chr8g0345711 | 47.287 | 129 | 62 | 5 | 16 | 139 | 12 | 139 | 4.33e-31 | 114 |
| Msa0355550 | MtrunA17_Chr7g0266701 | 38.889 | 162 | 89 | 5 | 16 | 167 | 4 | 165 | 1.88e-30 | 115 |
| Msa0355550 | MtrunA17_Chr4g0050701 | 37.342 | 158 | 85 | 3 | 16 | 167 | 11 | 160 | 5.47e-29 | 109 |
| Msa0355550 | MtrunA17_Chr8g0345701 | 46.154 | 143 | 55 | 7 | 16 | 139 | 7 | 146 | 5.56e-29 | 109 |
| Msa0355550 | MtrunA17_Chr8g0345731 | 45.038 | 131 | 65 | 5 | 16 | 139 | 24 | 154 | 3.75e-28 | 107 |
| Msa0355550 | MtrunA17_Chr8g0345721 | 37.158 | 183 | 68 | 9 | 2 | 139 | 11 | 191 | 1.80e-25 | 100 |
| Msa0355550 | MtrunA17_Chr8g0384351 | 37.647 | 170 | 80 | 6 | 11 | 176 | 5 | 152 | 4.35e-25 | 99.4 |
| Msa0355550 | MtrunA17_Chr7g0243371 | 47.727 | 88 | 42 | 2 | 63 | 146 | 9 | 96 | 1.67e-22 | 90.5 |
| Msa0355550 | MtrunA17_Chr8g0345741 | 43.697 | 119 | 59 | 6 | 27 | 139 | 2 | 118 | 1.75e-22 | 91.7 |
| Msa0355550 | MtrunA17_Chr3g0130321 | 35.000 | 180 | 96 | 7 | 12 | 176 | 3 | 176 | 1.94e-20 | 87.4 |
| Msa0355550 | MtrunA17_Chr3g0113011 | 63.934 | 61 | 22 | 0 | 2 | 62 | 5 | 65 | 4.10e-20 | 82.4 |
| Msa0355550 | MtrunA17_Chr3g0113041 | 60.656 | 61 | 24 | 0 | 2 | 62 | 5 | 65 | 3.15e-18 | 77.4 |
| Msa0355550 | MtrunA17_Chr7g0251661 | 32.283 | 127 | 80 | 5 | 16 | 139 | 10 | 133 | 1.01e-16 | 75.9 |
| Msa0355550 | MtrunA17_Chr7g0251651 | 32.609 | 138 | 87 | 5 | 11 | 145 | 13 | 147 | 2.11e-16 | 75.9 |
| Msa0355550 | MtrunA17_Chr4g0040541 | 31.053 | 190 | 107 | 5 | 16 | 188 | 48 | 230 | 1.05e-14 | 72.8 |
| Msa0355550 | MtrunA17_Chr7g0251671 | 28.571 | 147 | 95 | 5 | 16 | 157 | 10 | 151 | 1.34e-13 | 67.4 |
| Msa0355550 | MtrunA17_Chr8g0389661 | 33.766 | 154 | 76 | 5 | 12 | 141 | 43 | 194 | 8.33e-12 | 65.5 |
| Msa0355550 | MtrunA17_Chr7g0274971 | 30.573 | 157 | 91 | 7 | 22 | 168 | 11 | 159 | 3.19e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0355550 | AT5G61430.1 | 56.686 | 344 | 100 | 6 | 1 | 303 | 1 | 336 | 7.48e-126 | 363 |
| Msa0355550 | AT5G07680.1 | 56.012 | 341 | 100 | 9 | 1 | 303 | 1 | 329 | 3.46e-117 | 340 |
| Msa0355550 | AT5G07680.2 | 56.269 | 327 | 94 | 8 | 14 | 303 | 1 | 315 | 1.16e-113 | 331 |
| Msa0355550 | AT5G39610.1 | 68.720 | 211 | 63 | 1 | 7 | 217 | 11 | 218 | 1.23e-99 | 294 |
| Msa0355550 | AT3G29035.1 | 69.652 | 201 | 47 | 1 | 2 | 202 | 10 | 196 | 4.72e-93 | 279 |
| Msa0355550 | AT3G04060.1 | 66.667 | 204 | 61 | 4 | 2 | 198 | 4 | 207 | 8.58e-90 | 271 |
| Msa0355550 | AT5G18270.2 | 58.506 | 241 | 84 | 4 | 11 | 235 | 16 | 256 | 3.04e-89 | 270 |
| Msa0355550 | AT5G61430.2 | 52.015 | 273 | 96 | 4 | 65 | 303 | 2 | 273 | 1.02e-88 | 266 |
| Msa0355550 | AT5G18270.1 | 58.091 | 241 | 85 | 4 | 11 | 235 | 16 | 256 | 1.84e-88 | 268 |
| Msa0355550 | AT3G15170.1 | 60.444 | 225 | 77 | 4 | 11 | 230 | 15 | 232 | 7.37e-88 | 265 |
| Msa0355550 | AT5G53950.1 | 75.949 | 158 | 36 | 1 | 12 | 167 | 13 | 170 | 2.33e-84 | 258 |
| Msa0355550 | AT3G18400.1 | 74.684 | 158 | 37 | 2 | 16 | 173 | 5 | 159 | 1.19e-82 | 252 |
| Msa0355550 | AT2G24430.2 | 68.675 | 166 | 45 | 4 | 9 | 172 | 11 | 171 | 2.39e-75 | 233 |
| Msa0355550 | AT2G24430.1 | 68.675 | 166 | 45 | 4 | 9 | 172 | 11 | 171 | 2.39e-75 | 233 |
| Msa0355550 | AT1G76420.1 | 65.625 | 160 | 50 | 2 | 9 | 166 | 15 | 171 | 4.68e-69 | 218 |
| Msa0355550 | AT3G12977.1 | 48.095 | 210 | 99 | 3 | 16 | 224 | 18 | 218 | 1.26e-66 | 210 |
| Msa0355550 | AT1G56010.2 | 49.107 | 224 | 92 | 8 | 16 | 224 | 19 | 235 | 8.24e-63 | 201 |
| Msa0355550 | AT1G12260.2 | 58.861 | 158 | 58 | 3 | 16 | 170 | 7 | 160 | 1.19e-59 | 194 |
| Msa0355550 | AT1G12260.1 | 58.861 | 158 | 58 | 3 | 16 | 170 | 7 | 160 | 2.08e-59 | 195 |
| Msa0355550 | AT2G18060.3 | 44.672 | 244 | 109 | 7 | 16 | 246 | 9 | 239 | 8.07e-59 | 192 |
| Msa0355550 | AT2G18060.1 | 44.672 | 244 | 109 | 7 | 16 | 246 | 9 | 239 | 8.07e-59 | 192 |
| Msa0355550 | AT1G62700.1 | 59.494 | 158 | 57 | 3 | 16 | 170 | 7 | 160 | 9.98e-59 | 193 |
| Msa0355550 | AT1G62700.2 | 59.494 | 158 | 57 | 3 | 16 | 170 | 7 | 160 | 9.98e-59 | 193 |
| Msa0355550 | AT1G71930.2 | 51.534 | 163 | 72 | 2 | 13 | 172 | 6 | 164 | 4.00e-58 | 189 |
| Msa0355550 | AT1G71930.1 | 51.534 | 163 | 72 | 2 | 13 | 172 | 6 | 164 | 4.00e-58 | 189 |
| Msa0355550 | AT2G46770.1 | 54.762 | 168 | 62 | 3 | 13 | 166 | 13 | 180 | 4.57e-58 | 191 |
| Msa0355550 | AT4G10350.1 | 58.599 | 157 | 59 | 3 | 16 | 168 | 9 | 163 | 7.51e-58 | 189 |
| Msa0355550 | AT4G27410.2 | 52.941 | 170 | 75 | 2 | 8 | 174 | 3 | 170 | 2.26e-57 | 187 |
| Msa0355550 | AT4G36160.2 | 54.438 | 169 | 64 | 4 | 1 | 166 | 5 | 163 | 2.32e-57 | 189 |
| Msa0355550 | AT4G36160.1 | 54.438 | 169 | 64 | 4 | 1 | 166 | 1 | 159 | 2.49e-57 | 189 |
| Msa0355550 | AT4G36160.3 | 54.438 | 169 | 64 | 4 | 1 | 166 | 1 | 159 | 2.49e-57 | 189 |
| Msa0355550 | AT3G61910.1 | 43.852 | 244 | 116 | 6 | 13 | 235 | 8 | 251 | 3.43e-57 | 187 |
| Msa0355550 | AT5G62380.2 | 54.286 | 175 | 73 | 4 | 16 | 187 | 7 | 177 | 3.76e-57 | 187 |
| Msa0355550 | AT5G62380.1 | 54.286 | 175 | 73 | 4 | 16 | 187 | 7 | 177 | 3.76e-57 | 187 |
| Msa0355550 | AT1G61110.1 | 52.273 | 176 | 73 | 3 | 16 | 180 | 16 | 191 | 6.48e-57 | 186 |
| Msa0355550 | AT3G17730.1 | 56.494 | 154 | 63 | 2 | 16 | 167 | 6 | 157 | 8.48e-57 | 184 |
| Msa0355550 | AT3G04070.2 | 44.490 | 245 | 110 | 8 | 16 | 242 | 10 | 246 | 8.55e-57 | 187 |
| Msa0355550 | AT5G66300.1 | 42.562 | 242 | 121 | 6 | 16 | 246 | 12 | 246 | 8.86e-57 | 185 |
| Msa0355550 | AT3G15500.1 | 54.491 | 167 | 74 | 2 | 13 | 179 | 11 | 175 | 1.49e-56 | 185 |
| Msa0355550 | AT1G33280.1 | 56.494 | 154 | 59 | 2 | 16 | 166 | 8 | 156 | 2.21e-56 | 184 |
| Msa0355550 | AT5G04410.1 | 57.500 | 160 | 62 | 3 | 16 | 172 | 9 | 165 | 4.46e-56 | 190 |
| Msa0355550 | AT3G10500.1 | 56.522 | 161 | 62 | 3 | 16 | 172 | 9 | 165 | 2.07e-55 | 188 |
| Msa0355550 | AT1G32770.1 | 55.152 | 165 | 63 | 3 | 13 | 166 | 13 | 177 | 2.37e-55 | 183 |
| Msa0355550 | AT1G52890.1 | 51.705 | 176 | 80 | 3 | 13 | 186 | 11 | 183 | 7.50e-55 | 181 |
| Msa0355550 | AT1G69490.1 | 54.037 | 161 | 72 | 2 | 13 | 171 | 6 | 166 | 9.81e-55 | 179 |
| Msa0355550 | AT1G79580.3 | 56.329 | 158 | 60 | 3 | 13 | 166 | 14 | 166 | 1.25e-54 | 182 |
| Msa0355550 | AT1G79580.5 | 56.329 | 158 | 60 | 3 | 13 | 166 | 14 | 166 | 1.25e-54 | 182 |
| Msa0355550 | AT1G79580.4 | 56.329 | 158 | 60 | 3 | 13 | 166 | 14 | 166 | 1.25e-54 | 182 |
| Msa0355550 | AT1G79580.2 | 56.329 | 158 | 60 | 3 | 13 | 166 | 14 | 166 | 1.25e-54 | 182 |
| Msa0355550 | AT1G79580.1 | 56.329 | 158 | 60 | 3 | 13 | 166 | 14 | 166 | 1.25e-54 | 182 |
| Msa0355550 | AT4G35580.1 | 47.761 | 201 | 88 | 4 | 16 | 206 | 9 | 202 | 1.28e-54 | 185 |
| Msa0355550 | AT4G35580.3 | 47.761 | 201 | 88 | 4 | 16 | 206 | 9 | 202 | 1.74e-54 | 185 |
| Msa0355550 | AT4G35580.2 | 47.761 | 201 | 88 | 4 | 16 | 206 | 9 | 202 | 1.81e-54 | 185 |
| Msa0355550 | AT1G01720.1 | 56.129 | 155 | 65 | 3 | 14 | 166 | 5 | 158 | 2.95e-54 | 178 |
| Msa0355550 | AT3G04070.1 | 42.529 | 261 | 108 | 9 | 16 | 242 | 10 | 262 | 3.02e-54 | 181 |
| Msa0355550 | AT1G54330.1 | 57.962 | 157 | 59 | 2 | 14 | 168 | 4 | 155 | 3.28e-54 | 179 |
| Msa0355550 | AT1G33060.1 | 56.209 | 153 | 63 | 2 | 16 | 166 | 24 | 174 | 5.11e-54 | 186 |
| Msa0355550 | AT1G33060.2 | 56.209 | 153 | 63 | 2 | 16 | 166 | 24 | 174 | 5.98e-54 | 186 |
| Msa0355550 | AT5G46590.1 | 56.962 | 158 | 58 | 4 | 16 | 167 | 6 | 159 | 1.31e-53 | 177 |
| Msa0355550 | AT3G03200.1 | 55.769 | 156 | 60 | 3 | 16 | 166 | 6 | 157 | 1.61e-53 | 182 |
| Msa0355550 | AT3G10490.1 | 50.276 | 181 | 87 | 2 | 16 | 194 | 27 | 206 | 3.73e-53 | 174 |
| Msa0355550 | AT3G10480.1 | 57.325 | 157 | 64 | 2 | 16 | 170 | 27 | 182 | 4.64e-53 | 180 |
| Msa0355550 | AT4G27410.3 | 49.718 | 177 | 70 | 2 | 13 | 172 | 11 | 185 | 8.89e-53 | 175 |
| Msa0355550 | AT3G10480.2 | 57.233 | 159 | 60 | 3 | 16 | 170 | 27 | 181 | 1.74e-52 | 178 |
| Msa0355550 | AT5G17260.1 | 54.487 | 156 | 62 | 3 | 16 | 166 | 6 | 157 | 2.71e-52 | 178 |
| Msa0355550 | AT1G77450.1 | 54.037 | 161 | 72 | 2 | 7 | 166 | 1 | 160 | 3.93e-52 | 172 |
| Msa0355550 | AT1G26870.1 | 45.755 | 212 | 94 | 5 | 9 | 211 | 11 | 210 | 4.13e-52 | 176 |
| Msa0355550 | AT5G46590.2 | 62.016 | 129 | 46 | 2 | 16 | 141 | 6 | 134 | 4.50e-52 | 172 |
| Msa0355550 | AT5G08790.1 | 53.374 | 163 | 72 | 2 | 13 | 172 | 4 | 165 | 4.97e-52 | 172 |
| Msa0355550 | AT1G65910.1 | 52.830 | 159 | 71 | 2 | 16 | 172 | 6 | 162 | 5.44e-52 | 181 |
| Msa0355550 | AT2G33480.2 | 53.216 | 171 | 68 | 4 | 1 | 169 | 1 | 161 | 7.86e-52 | 171 |
| Msa0355550 | AT3G10490.2 | 56.051 | 157 | 66 | 2 | 16 | 170 | 27 | 182 | 8.11e-52 | 176 |
| Msa0355550 | AT4G28530.1 | 50.888 | 169 | 59 | 4 | 16 | 166 | 10 | 172 | 1.82e-51 | 173 |
| Msa0355550 | AT5G13180.1 | 50.000 | 174 | 77 | 4 | 1 | 172 | 1 | 166 | 2.23e-51 | 170 |
| Msa0355550 | AT2G33480.1 | 52.632 | 171 | 71 | 4 | 1 | 169 | 1 | 163 | 4.84e-51 | 169 |
| Msa0355550 | AT2G43000.1 | 47.239 | 163 | 84 | 2 | 9 | 171 | 12 | 172 | 7.55e-50 | 167 |
| Msa0355550 | AT4G17980.1 | 47.090 | 189 | 96 | 2 | 16 | 200 | 6 | 194 | 8.62e-50 | 166 |
| Msa0355550 | AT4G17980.2 | 47.090 | 189 | 96 | 2 | 16 | 200 | 6 | 194 | 1.02e-49 | 167 |
| Msa0355550 | AT3G15510.1 | 50.610 | 164 | 60 | 3 | 20 | 167 | 21 | 179 | 1.22e-49 | 169 |
| Msa0355550 | AT5G63790.1 | 50.898 | 167 | 78 | 2 | 9 | 172 | 43 | 208 | 1.26e-49 | 167 |
| Msa0355550 | AT5G63790.2 | 50.898 | 167 | 78 | 2 | 9 | 172 | 53 | 218 | 1.35e-49 | 167 |
| Msa0355550 | AT5G24590.2 | 45.631 | 206 | 87 | 6 | 16 | 213 | 13 | 201 | 1.89e-49 | 170 |
| Msa0355550 | AT5G39820.1 | 48.876 | 178 | 65 | 5 | 12 | 166 | 17 | 191 | 9.56e-49 | 166 |
| Msa0355550 | AT3G49530.2 | 51.613 | 155 | 68 | 4 | 16 | 166 | 13 | 164 | 5.38e-48 | 166 |
| Msa0355550 | AT3G49530.1 | 51.613 | 155 | 68 | 4 | 16 | 166 | 13 | 164 | 1.84e-47 | 166 |
| Msa0355550 | AT3G10480.3 | 47.368 | 190 | 64 | 2 | 16 | 170 | 27 | 215 | 2.84e-47 | 166 |
| Msa0355550 | AT2G02450.2 | 50.327 | 153 | 71 | 2 | 15 | 166 | 50 | 198 | 6.54e-47 | 163 |
| Msa0355550 | AT2G02450.1 | 50.327 | 153 | 71 | 2 | 15 | 166 | 50 | 198 | 7.41e-47 | 162 |
| Msa0355550 | AT3G12977.2 | 47.205 | 161 | 75 | 3 | 65 | 224 | 14 | 165 | 1.49e-46 | 157 |
| Msa0355550 | AT5G64060.1 | 46.875 | 160 | 79 | 3 | 16 | 172 | 6 | 162 | 2.66e-46 | 160 |
| Msa0355550 | AT5G09330.5 | 48.125 | 160 | 77 | 3 | 16 | 172 | 6 | 162 | 2.69e-46 | 163 |
| Msa0355550 | AT5G09330.2 | 48.125 | 160 | 77 | 3 | 16 | 172 | 6 | 162 | 2.69e-46 | 163 |
| Msa0355550 | AT5G09330.4 | 48.125 | 160 | 77 | 3 | 16 | 172 | 6 | 162 | 2.69e-46 | 163 |
| Msa0355550 | AT5G09330.3 | 48.125 | 160 | 77 | 3 | 16 | 172 | 6 | 162 | 2.69e-46 | 163 |
| Msa0355550 | AT5G09330.1 | 48.125 | 160 | 77 | 3 | 16 | 172 | 6 | 162 | 2.69e-46 | 163 |
| Msa0355550 | AT2G27300.1 | 49.007 | 151 | 67 | 3 | 16 | 165 | 14 | 155 | 4.63e-46 | 159 |
| Msa0355550 | AT1G52880.1 | 51.250 | 160 | 68 | 3 | 20 | 169 | 21 | 180 | 2.61e-45 | 156 |
| Msa0355550 | AT1G32510.1 | 47.647 | 170 | 77 | 4 | 15 | 174 | 5 | 172 | 2.70e-44 | 152 |
| Msa0355550 | AT1G56010.1 | 49.425 | 174 | 67 | 7 | 65 | 224 | 2 | 168 | 5.15e-44 | 151 |
| Msa0355550 | AT2G17040.1 | 47.134 | 157 | 73 | 3 | 18 | 171 | 8 | 157 | 6.81e-44 | 151 |
| Msa0355550 | AT1G34180.3 | 47.771 | 157 | 78 | 2 | 18 | 172 | 18 | 172 | 9.58e-44 | 155 |
| Msa0355550 | AT1G34190.1 | 47.134 | 157 | 79 | 2 | 18 | 172 | 18 | 172 | 2.16e-43 | 156 |
| Msa0355550 | AT1G34180.1 | 47.771 | 157 | 78 | 2 | 18 | 172 | 18 | 172 | 3.54e-43 | 155 |
| Msa0355550 | AT5G22290.1 | 46.939 | 147 | 69 | 2 | 18 | 163 | 23 | 161 | 2.88e-42 | 149 |
| Msa0355550 | AT3G12910.1 | 43.889 | 180 | 84 | 6 | 8 | 172 | 14 | 191 | 3.41e-42 | 147 |
| Msa0355550 | AT1G34180.4 | 44.970 | 169 | 77 | 3 | 18 | 172 | 18 | 184 | 4.04e-42 | 151 |
| Msa0355550 | AT3G44290.2 | 51.969 | 127 | 60 | 1 | 18 | 143 | 16 | 142 | 8.31e-42 | 144 |
| Msa0355550 | AT1G34180.2 | 44.970 | 169 | 77 | 3 | 18 | 172 | 18 | 184 | 1.75e-41 | 151 |
| Msa0355550 | AT3G44290.1 | 51.969 | 127 | 60 | 1 | 18 | 143 | 16 | 142 | 3.31e-41 | 146 |
| Msa0355550 | AT1G32870.1 | 49.686 | 159 | 76 | 2 | 16 | 172 | 10 | 166 | 7.12e-41 | 149 |
| Msa0355550 | AT1G32870.2 | 49.686 | 159 | 76 | 2 | 16 | 172 | 10 | 166 | 8.25e-41 | 149 |
| Msa0355550 | AT1G32870.3 | 49.686 | 159 | 76 | 2 | 16 | 172 | 46 | 202 | 1.57e-40 | 148 |
| Msa0355550 | AT5G04395.1 | 50.000 | 142 | 55 | 2 | 16 | 141 | 28 | 169 | 1.46e-38 | 135 |
| Msa0355550 | AT4G10350.2 | 56.250 | 112 | 43 | 3 | 61 | 168 | 7 | 116 | 1.45e-34 | 127 |
| Msa0355550 | AT4G28530.2 | 47.656 | 128 | 49 | 2 | 16 | 125 | 10 | 137 | 3.01e-31 | 119 |
| Msa0355550 | AT2G33480.3 | 55.340 | 103 | 40 | 2 | 69 | 169 | 8 | 106 | 1.48e-30 | 114 |
| Msa0355550 | AT3G04420.2 | 40.260 | 154 | 81 | 4 | 17 | 166 | 4 | 150 | 7.28e-30 | 115 |
| Msa0355550 | AT3G04420.1 | 40.260 | 154 | 81 | 4 | 17 | 166 | 4 | 150 | 3.35e-29 | 114 |
| Msa0355550 | AT4G01550.1 | 41.139 | 158 | 80 | 6 | 19 | 170 | 7 | 157 | 1.56e-27 | 111 |
| Msa0355550 | AT1G02230.1 | 43.165 | 139 | 69 | 5 | 14 | 145 | 1 | 136 | 3.46e-27 | 109 |
| Msa0355550 | AT3G44350.2 | 37.037 | 162 | 95 | 4 | 16 | 171 | 5 | 165 | 3.67e-27 | 106 |
| Msa0355550 | AT5G64530.1 | 36.416 | 173 | 84 | 4 | 14 | 172 | 1 | 161 | 5.15e-27 | 104 |
| Msa0355550 | AT5G22380.1 | 37.013 | 154 | 88 | 5 | 19 | 164 | 8 | 160 | 9.08e-27 | 105 |
| Msa0355550 | AT1G02220.1 | 34.375 | 192 | 111 | 6 | 14 | 200 | 1 | 182 | 1.62e-25 | 105 |
| Msa0355550 | AT5G64530.2 | 40.769 | 130 | 63 | 3 | 14 | 141 | 1 | 118 | 2.62e-25 | 99.4 |
| Msa0355550 | AT1G02250.1 | 30.508 | 295 | 180 | 10 | 14 | 300 | 1 | 278 | 7.38e-25 | 102 |
| Msa0355550 | AT3G44350.1 | 38.356 | 146 | 80 | 4 | 16 | 153 | 5 | 148 | 2.33e-24 | 97.1 |
| Msa0355550 | AT2G18060.2 | 39.877 | 163 | 75 | 6 | 94 | 246 | 2 | 151 | 4.38e-24 | 99.4 |
| Msa0355550 | AT4G01520.1 | 38.961 | 154 | 80 | 7 | 17 | 163 | 5 | 151 | 7.62e-24 | 99.0 |
| Msa0355550 | AT4G01540.4 | 39.474 | 152 | 78 | 7 | 19 | 163 | 7 | 151 | 3.43e-23 | 98.6 |
| Msa0355550 | AT4G01540.3 | 39.474 | 152 | 78 | 7 | 19 | 163 | 7 | 151 | 3.48e-23 | 99.0 |
| Msa0355550 | AT3G10490.4 | 57.317 | 82 | 34 | 1 | 89 | 170 | 2 | 82 | 5.06e-23 | 97.8 |
| Msa0355550 | AT3G10490.3 | 57.317 | 82 | 34 | 1 | 89 | 170 | 2 | 82 | 5.06e-23 | 97.8 |
| Msa0355550 | AT4G01540.1 | 39.474 | 152 | 78 | 7 | 19 | 163 | 7 | 151 | 5.34e-23 | 99.0 |
| Msa0355550 | AT4G01540.2 | 39.474 | 152 | 78 | 7 | 19 | 163 | 7 | 151 | 5.50e-23 | 98.6 |
| Msa0355550 | AT1G01010.1 | 37.725 | 167 | 75 | 7 | 11 | 163 | 2 | 153 | 8.35e-23 | 98.2 |
| Msa0355550 | AT2G43000.2 | 43.158 | 95 | 53 | 1 | 77 | 171 | 1 | 94 | 2.83e-21 | 89.7 |
| Msa0355550 | AT3G56530.1 | 31.613 | 155 | 99 | 3 | 13 | 164 | 49 | 199 | 2.44e-19 | 87.0 |
| Msa0355550 | AT5G14000.2 | 37.879 | 132 | 78 | 2 | 14 | 143 | 13 | 142 | 4.71e-19 | 82.8 |
| Msa0355550 | AT5G14000.1 | 35.976 | 164 | 91 | 5 | 14 | 172 | 13 | 167 | 1.54e-18 | 82.4 |
| Msa0355550 | AT3G55210.1 | 32.317 | 164 | 91 | 5 | 15 | 164 | 10 | 167 | 1.62e-16 | 78.6 |
| Msa0355550 | AT5G50820.1 | 31.053 | 190 | 107 | 7 | 14 | 191 | 15 | 192 | 2.43e-16 | 76.3 |
| Msa0355550 | AT5G22290.2 | 45.070 | 71 | 31 | 1 | 95 | 165 | 2 | 64 | 2.14e-15 | 74.7 |
| Msa0355550 | AT3G04430.1 | 31.538 | 130 | 77 | 3 | 22 | 139 | 6 | 135 | 1.05e-12 | 66.2 |
| Msa0355550 | AT4G29230.3 | 32.911 | 158 | 79 | 5 | 9 | 141 | 41 | 196 | 3.03e-12 | 67.0 |
| Msa0355550 | AT4G29230.1 | 32.911 | 158 | 79 | 5 | 9 | 141 | 41 | 196 | 4.47e-12 | 66.6 |
| Msa0355550 | AT5G14490.4 | 32.911 | 158 | 83 | 6 | 16 | 152 | 55 | 210 | 7.82e-12 | 65.5 |
| Msa0355550 | AT5G14490.1 | 32.911 | 158 | 83 | 6 | 16 | 152 | 58 | 213 | 8.31e-12 | 65.5 |
| Msa0355550 | AT5G14490.2 | 31.847 | 157 | 86 | 5 | 16 | 152 | 55 | 210 | 9.71e-12 | 64.7 |
| Msa0355550 | AT5G14490.3 | 31.847 | 157 | 86 | 5 | 16 | 152 | 58 | 213 | 1.01e-11 | 65.5 |
| Msa0355550 | AT4G29230.2 | 32.903 | 155 | 77 | 5 | 12 | 141 | 43 | 195 | 1.36e-11 | 65.5 |
Find 56 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAAATGGGTGTTGTTAA+AGG | 0.206873 | 3_1:+30142802 | None:intergenic |
| CCAACTTGGTTTCTTTCAAT+TGG | 0.256365 | 3_1:+30142836 | None:intergenic |
| GGTTATAGGTAAAGCCAAAA+TGG | 0.262710 | 3_1:-30143725 | Msa0355550:intron |
| CTAAAGGAGAGAAAAGTAAT+TGG | 0.275422 | 3_1:-30143525 | Msa0355550:CDS |
| TAGTCATTACCTTTACAAAA+AGG | 0.312749 | 3_1:-30144088 | Msa0355550:CDS |
| GATTTGAAGGAAGTTCAAAA+TGG | 0.334061 | 3_1:+30142789 | None:intergenic |
| CAATTGATCTATCTACCTTA+TGG | 0.334456 | 3_1:-30142607 | Msa0355550:CDS |
| GAGCTACTGAAGCTGGATAT+TGG | 0.357650 | 3_1:-30143636 | Msa0355550:CDS |
| AGATTGAGTGGGTGATTTGC+AGG | 0.374745 | 3_1:-30143024 | Msa0355550:CDS |
| GTATTCAAGAAGAATTTATC+AGG | 0.375173 | 3_1:-30143001 | Msa0355550:CDS |
| TTGGTTTCTTTCAATTGGAT+TGG | 0.390371 | 3_1:+30142841 | None:intergenic |
| TTTGAACAAATCTGAGCCTT+GGG | 0.414691 | 3_1:-30144022 | Msa0355550:CDS |
| ATGCATGAATATAGACTTGA+TGG | 0.429188 | 3_1:-30143499 | Msa0355550:CDS |
| CATAAGGTAGATAGATCAAT+TGG | 0.429936 | 3_1:+30142608 | None:intergenic |
| TACAGAGGAAAATCTCTTGT+TGG | 0.430359 | 3_1:-30143586 | Msa0355550:CDS |
| AGAGTAATTGAATGATTTGA+AGG | 0.441015 | 3_1:+30142776 | None:intergenic |
| TTCAATTGGATTGGAGAAGC+AGG | 0.441289 | 3_1:+30142850 | None:intergenic |
| ATTTGAAGGAAGTTCAAAAT+GGG | 0.443413 | 3_1:+30142790 | None:intergenic |
| GTTATAGGTAAAGCCAAAAT+GGG | 0.446731 | 3_1:-30143724 | Msa0355550:intron |
| GTGCAGTTGAAGCAGGTTGA+TGG | 0.452689 | 3_1:+30142630 | None:intergenic |
| CTAATAAGCTCTTCATCAGT+TGG | 0.462975 | 3_1:+30144108 | None:intergenic |
| GCTGGATATTGGAAGGCAAC+AGG | 0.465290 | 3_1:-30143625 | Msa0355550:CDS |
| TAAAGGAGAGAAAAGTAATT+GGG | 0.477512 | 3_1:-30143524 | Msa0355550:CDS |
| ACTAATAGAGCTACTGAAGC+TGG | 0.478520 | 3_1:-30143643 | Msa0355550:CDS |
| TTGAATTCAGTAATTCCATA+AGG | 0.481231 | 3_1:+30142592 | None:intergenic |
| ATTTGAACAAATCTGAGCCT+TGG | 0.481500 | 3_1:-30144023 | Msa0355550:CDS |
| TCAATTGGTGCAGTTGAAGC+AGG | 0.484138 | 3_1:+30142623 | None:intergenic |
| TGCCAGGGCCATTGGAGAAG+TGG | 0.486536 | 3_1:-30144046 | Msa0355550:CDS |
| TCAACAAATTTGCCATTACC+TGG | 0.493752 | 3_1:-30142692 | Msa0355550:CDS |
| AAAAGTACCCAACTGGTTTG+AGG | 0.496887 | 3_1:-30143666 | Msa0355550:CDS |
| CCTGGTTCTGTCTATAACAA+TGG | 0.502369 | 3_1:-30142674 | Msa0355550:CDS |
| ATCCACTTCTCCAATGGCCC+TGG | 0.506104 | 3_1:+30144044 | None:intergenic |
| ATAATGAGGTTAGAATCTCT+TGG | 0.511146 | 3_1:-30142956 | Msa0355550:CDS |
| AGGAATCAAAGGTTCCAACT+TGG | 0.513759 | 3_1:+30142822 | None:intergenic |
| GGTAATGGCAAATTTGTTGA+GGG | 0.518830 | 3_1:+30142695 | None:intergenic |
| CTATTAGTCCTCAAACCAGT+TGG | 0.520776 | 3_1:+30143658 | None:intergenic |
| GTTCAAATCCACTTCTCCAA+TGG | 0.523031 | 3_1:+30144038 | None:intergenic |
| GGTGTTGTTAAAGGAATCAA+AGG | 0.528587 | 3_1:+30142811 | None:intergenic |
| TATTAGTCCTCAAACCAGTT+GGG | 0.531607 | 3_1:+30143659 | None:intergenic |
| CATGTCATTCTGGGATAATG+AGG | 0.543430 | 3_1:-30142970 | Msa0355550:CDS |
| TACAAAGGAAGAGCACCTAA+AGG | 0.552423 | 3_1:-30143541 | Msa0355550:CDS |
| TTATAGACAGAACCAGGTAA+TGG | 0.560214 | 3_1:+30142680 | None:intergenic |
| AGGTAATGGCAAATTTGTTG+AGG | 0.565495 | 3_1:+30142694 | None:intergenic |
| CCAATTGAAAGAAACCAAGT+TGG | 0.570767 | 3_1:-30142836 | Msa0355550:CDS |
| CCATTGTTATAGACAGAACC+AGG | 0.571803 | 3_1:+30142674 | None:intergenic |
| AAAGATAAAGAGATTTACAG+AGG | 0.582911 | 3_1:-30143601 | Msa0355550:CDS |
| GGTGATGAATCTGTGAGTGG+TGG | 0.583550 | 3_1:+30142908 | None:intergenic |
| AGTAGAGTAAAATGAACCAA+TGG | 0.585480 | 3_1:+30142736 | None:intergenic |
| TACTGAAGCTGGATATTGGA+AGG | 0.589257 | 3_1:-30143632 | Msa0355550:CDS |
| TTGGAGAAGCAGGACACGTA+AGG | 0.590495 | 3_1:+30142860 | None:intergenic |
| GATTGAGTGGGTGATTTGCA+GGG | 0.595659 | 3_1:-30143023 | Msa0355550:CDS |
| AACTTACATGGCAAATCCCA+AGG | 0.595710 | 3_1:+30144006 | None:intergenic |
| CAACCTCCCTAAAACTGCCA+AGG | 0.602916 | 3_1:-30143461 | Msa0355550:intron |
| GTTGGATGAAACCTAAACCC+TGG | 0.635628 | 3_1:+30144126 | None:intergenic |
| TAAGGTGATGAATCTGTGAG+TGG | 0.710371 | 3_1:+30142905 | None:intergenic |
| GGATGAAACCTAAACCCTGG+AGG | 0.741977 | 3_1:+30144129 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGTAATTATTTTCTCTT+TGG | - | chr3_1:30142986-30143005 | Msa0355550:CDS | 15.0% |
| !! | TTTAAATCCGAAATAAAAAT+AGG | + | chr3_1:30143366-30143385 | None:intergenic | 15.0% |
| !! | TTTATTTCGGATTTAAATAA+AGG | - | chr3_1:30143369-30143388 | Msa0355550:intron | 15.0% |
| !!! | AAATGTAATTATTTTCTCTT+TGG | - | chr3_1:30142986-30143005 | Msa0355550:CDS | 15.0% |
| !! | TTTAAATCCGAAATAAAAAT+AGG | + | chr3_1:30143366-30143385 | None:intergenic | 15.0% |
| !! | TTTATTTCGGATTTAAATAA+AGG | - | chr3_1:30143369-30143388 | Msa0355550:intron | 15.0% |
| !!! | AATCATTTACCTTTTTGTAA+AGG | + | chr3_1:30142699-30142718 | None:intergenic | 20.0% |
| !!! | TGTACATGTTTTGATTAATT+TGG | - | chr3_1:30143029-30143048 | Msa0355550:intron | 20.0% |
| !!! | GTTTTGATTAATTTGGTTAT+AGG | - | chr3_1:30143036-30143055 | Msa0355550:intron | 20.0% |
| !!! | GTGTATACCTATTTTTATTT+CGG | - | chr3_1:30143356-30143375 | Msa0355550:intron | 20.0% |
| !!! | ACAACCAACATTTTAAAAAA+CGG | + | chr3_1:30143506-30143525 | None:intergenic | 20.0% |
| !! | TTCAAATTATCATTACTCAT+TGG | - | chr3_1:30143653-30143672 | Msa0355550:CDS | 20.0% |
| !!! | AATCATTTACCTTTTTGTAA+AGG | + | chr3_1:30142699-30142718 | None:intergenic | 20.0% |
| !!! | TGTACATGTTTTGATTAATT+TGG | - | chr3_1:30143029-30143048 | Msa0355550:intron | 20.0% |
| !!! | GTTTTGATTAATTTGGTTAT+AGG | - | chr3_1:30143036-30143055 | Msa0355550:intron | 20.0% |
| !!! | GTGTATACCTATTTTTATTT+CGG | - | chr3_1:30143356-30143375 | Msa0355550:intron | 20.0% |
| !!! | ACAACCAACATTTTAAAAAA+CGG | + | chr3_1:30143506-30143525 | None:intergenic | 20.0% |
| !! | TTCAAATTATCATTACTCAT+TGG | - | chr3_1:30143653-30143672 | Msa0355550:CDS | 20.0% |
| !!! | AAATGTTTCAGTTTTGTGTA+AGG | - | chr3_1:30142603-30142622 | Msa0355550:CDS | 25.0% |
| ! | TAGTCATTACCTTTACAAAA+AGG | - | chr3_1:30142687-30142706 | Msa0355550:CDS | 25.0% |
| ! | CAAAGATCAAAAACAAAAGT+AGG | + | chr3_1:30142804-30142823 | None:intergenic | 25.0% |
| ! | CCTAATATAAACCTATCAAA+AGG | + | chr3_1:30142926-30142945 | None:intergenic | 25.0% |
| !! | CCTTTTGATAGGTTTATATT+AGG | - | chr3_1:30142923-30142942 | Msa0355550:CDS | 25.0% |
| ! | AAAGATAAAGAGATTTACAG+AGG | - | chr3_1:30143174-30143193 | Msa0355550:intron | 25.0% |
| !!! | AAAACTCTTGTTTTCTACAA+AGG | - | chr3_1:30143219-30143238 | Msa0355550:intron | 25.0% |
| ! | TAAAGGAGAGAAAAGTAATT+GGG | - | chr3_1:30143251-30143270 | Msa0355550:intron | 25.0% |
| ! | TTGAAACAGATAATTTACCT+TGG | + | chr3_1:30143334-30143353 | None:intergenic | 25.0% |
| ! | TTTAAAAAACGGTCTTAGAA+AGG | + | chr3_1:30143495-30143514 | None:intergenic | 25.0% |
| !!! | AAGACCGTTTTTTAAAATGT+TGG | - | chr3_1:30143499-30143518 | Msa0355550:CDS | 25.0% |
| ! | TTGAATGTAATCACATGTTA+CGG | + | chr3_1:30143621-30143640 | None:intergenic | 25.0% |
| !!! | TTATTTCGACTAATTGGTTT+TGG | - | chr3_1:30143717-30143736 | Msa0355550:CDS | 25.0% |
| ! | GTATTCAAGAAGAATTTATC+AGG | - | chr3_1:30143774-30143793 | Msa0355550:intron | 25.0% |
| !! | TTGATTTTGTCAATGGAATA+AGG | + | chr3_1:30143891-30143910 | None:intergenic | 25.0% |
| ! | ATTTGAAGGAAGTTCAAAAT+GGG | + | chr3_1:30143988-30144007 | None:intergenic | 25.0% |
| ! | AGAGTAATTGAATGATTTGA+AGG | + | chr3_1:30144002-30144021 | None:intergenic | 25.0% |
| !!! | AAATGTTTCAGTTTTGTGTA+AGG | - | chr3_1:30142603-30142622 | Msa0355550:CDS | 25.0% |
| ! | TAGTCATTACCTTTACAAAA+AGG | - | chr3_1:30142687-30142706 | Msa0355550:CDS | 25.0% |
| ! | CAAAGATCAAAAACAAAAGT+AGG | + | chr3_1:30142804-30142823 | None:intergenic | 25.0% |
| ! | CCTAATATAAACCTATCAAA+AGG | + | chr3_1:30142926-30142945 | None:intergenic | 25.0% |
| !! | CCTTTTGATAGGTTTATATT+AGG | - | chr3_1:30142923-30142942 | Msa0355550:CDS | 25.0% |
| ! | AAAGATAAAGAGATTTACAG+AGG | - | chr3_1:30143174-30143193 | Msa0355550:intron | 25.0% |
| !!! | AAAACTCTTGTTTTCTACAA+AGG | - | chr3_1:30143219-30143238 | Msa0355550:intron | 25.0% |
| ! | TAAAGGAGAGAAAAGTAATT+GGG | - | chr3_1:30143251-30143270 | Msa0355550:intron | 25.0% |
| ! | TTGAAACAGATAATTTACCT+TGG | + | chr3_1:30143334-30143353 | None:intergenic | 25.0% |
| ! | TTTAAAAAACGGTCTTAGAA+AGG | + | chr3_1:30143495-30143514 | None:intergenic | 25.0% |
| !!! | AAGACCGTTTTTTAAAATGT+TGG | - | chr3_1:30143499-30143518 | Msa0355550:CDS | 25.0% |
| ! | TTGAATGTAATCACATGTTA+CGG | + | chr3_1:30143621-30143640 | None:intergenic | 25.0% |
| !!! | TTATTTCGACTAATTGGTTT+TGG | - | chr3_1:30143717-30143736 | Msa0355550:CDS | 25.0% |
| ! | GTATTCAAGAAGAATTTATC+AGG | - | chr3_1:30143774-30143793 | Msa0355550:intron | 25.0% |
| !! | TTGATTTTGTCAATGGAATA+AGG | + | chr3_1:30143891-30143910 | None:intergenic | 25.0% |
| ! | ATTTGAAGGAAGTTCAAAAT+GGG | + | chr3_1:30143988-30144007 | None:intergenic | 25.0% |
| ! | AGAGTAATTGAATGATTTGA+AGG | + | chr3_1:30144002-30144021 | None:intergenic | 25.0% |
| AGGACTCATTATAACTTACA+TGG | + | chr3_1:30142784-30142803 | None:intergenic | 30.0% | |
| GTTATAGGTAAAGCCAAAAT+GGG | - | chr3_1:30143051-30143070 | Msa0355550:intron | 30.0% | |
| !! | CAATTACTTTTCTCTCCTTT+AGG | + | chr3_1:30143252-30143271 | None:intergenic | 30.0% |
| CTAAAGGAGAGAAAAGTAAT+TGG | - | chr3_1:30143250-30143269 | Msa0355550:intron | 30.0% | |
| ATGCATGAATATAGACTTGA+TGG | - | chr3_1:30143276-30143295 | Msa0355550:intron | 30.0% | |
| ! | AATTTACCTTGGCAGTTTTA+GGG | + | chr3_1:30143323-30143342 | None:intergenic | 30.0% |
| ! | TAATTTACCTTGGCAGTTTT+AGG | + | chr3_1:30143324-30143343 | None:intergenic | 30.0% |
| !! | TGTTGGTTGTGAACTTTTAT+TGG | - | chr3_1:30143516-30143535 | Msa0355550:CDS | 30.0% |
| TGAATGTAATCACATGTTAC+GGG | + | chr3_1:30143620-30143639 | None:intergenic | 30.0% | |
| !! | AGTGCTTTATTTCGACTAAT+TGG | - | chr3_1:30143711-30143730 | Msa0355550:CDS | 30.0% |
| !!! | TAATTGGTTTTGGTCTTTTG+TGG | - | chr3_1:30143727-30143746 | Msa0355550:intron | 30.0% |
| ATAATGAGGTTAGAATCTCT+TGG | - | chr3_1:30143819-30143838 | Msa0355550:intron | 30.0% | |
| !! | AGGTGATTTGATTTTGTCAA+TGG | + | chr3_1:30143898-30143917 | None:intergenic | 30.0% |
| TTGGTTTCTTTCAATTGGAT+TGG | + | chr3_1:30143937-30143956 | None:intergenic | 30.0% | |
| !! | TTCAAAATGGGTGTTGTTAA+AGG | + | chr3_1:30143976-30143995 | None:intergenic | 30.0% |
| GATTTGAAGGAAGTTCAAAA+TGG | + | chr3_1:30143989-30144008 | None:intergenic | 30.0% | |
| AGTAGAGTAAAATGAACCAA+TGG | + | chr3_1:30144042-30144061 | None:intergenic | 30.0% | |
| CATAAGGTAGATAGATCAAT+TGG | + | chr3_1:30144170-30144189 | None:intergenic | 30.0% | |
| CAATTGATCTATCTACCTTA+TGG | - | chr3_1:30144168-30144187 | Msa0355550:CDS | 30.0% | |
| AGGACTCATTATAACTTACA+TGG | + | chr3_1:30142784-30142803 | None:intergenic | 30.0% | |
| GTTATAGGTAAAGCCAAAAT+GGG | - | chr3_1:30143051-30143070 | Msa0355550:intron | 30.0% | |
| !! | CAATTACTTTTCTCTCCTTT+AGG | + | chr3_1:30143252-30143271 | None:intergenic | 30.0% |
| CTAAAGGAGAGAAAAGTAAT+TGG | - | chr3_1:30143250-30143269 | Msa0355550:intron | 30.0% | |
| ATGCATGAATATAGACTTGA+TGG | - | chr3_1:30143276-30143295 | Msa0355550:intron | 30.0% | |
| ! | AATTTACCTTGGCAGTTTTA+GGG | + | chr3_1:30143323-30143342 | None:intergenic | 30.0% |
| ! | TAATTTACCTTGGCAGTTTT+AGG | + | chr3_1:30143324-30143343 | None:intergenic | 30.0% |
| !! | TGTTGGTTGTGAACTTTTAT+TGG | - | chr3_1:30143516-30143535 | Msa0355550:CDS | 30.0% |
| TGAATGTAATCACATGTTAC+GGG | + | chr3_1:30143620-30143639 | None:intergenic | 30.0% | |
| !! | AGTGCTTTATTTCGACTAAT+TGG | - | chr3_1:30143711-30143730 | Msa0355550:CDS | 30.0% |
| !!! | TAATTGGTTTTGGTCTTTTG+TGG | - | chr3_1:30143727-30143746 | Msa0355550:intron | 30.0% |
| ATAATGAGGTTAGAATCTCT+TGG | - | chr3_1:30143819-30143838 | Msa0355550:intron | 30.0% | |
| !! | AGGTGATTTGATTTTGTCAA+TGG | + | chr3_1:30143898-30143917 | None:intergenic | 30.0% |
| TTGGTTTCTTTCAATTGGAT+TGG | + | chr3_1:30143937-30143956 | None:intergenic | 30.0% | |
| !! | TTCAAAATGGGTGTTGTTAA+AGG | + | chr3_1:30143976-30143995 | None:intergenic | 30.0% |
| GATTTGAAGGAAGTTCAAAA+TGG | + | chr3_1:30143989-30144008 | None:intergenic | 30.0% | |
| AGTAGAGTAAAATGAACCAA+TGG | + | chr3_1:30144042-30144061 | None:intergenic | 30.0% | |
| CATAAGGTAGATAGATCAAT+TGG | + | chr3_1:30144170-30144189 | None:intergenic | 30.0% | |
| CAATTGATCTATCTACCTTA+TGG | - | chr3_1:30144168-30144187 | Msa0355550:CDS | 30.0% | |
| !! | TTCAGTTTTGTGTAAGGAAG+AGG | - | chr3_1:30142609-30142628 | Msa0355550:CDS | 35.0% |
| CTAATAAGCTCTTCATCAGT+TGG | + | chr3_1:30142670-30142689 | None:intergenic | 35.0% | |
| ! | ATGATTCAAACTTTTCTGCC+AGG | - | chr3_1:30142713-30142732 | Msa0355550:CDS | 35.0% |
| ! | TGATTCAAACTTTTCTGCCA+GGG | - | chr3_1:30142714-30142733 | Msa0355550:CDS | 35.0% |
| ATTTGAACAAATCTGAGCCT+TGG | - | chr3_1:30142752-30142771 | Msa0355550:CDS | 35.0% | |
| TTTGAACAAATCTGAGCCTT+GGG | - | chr3_1:30142753-30142772 | Msa0355550:CDS | 35.0% | |
| TAATCCATATGCACGTAGAT+CGG | - | chr3_1:30142827-30142846 | Msa0355550:CDS | 35.0% | |
| TAAACGAAAAGTCGTACAGA+CGG | - | chr3_1:30142898-30142917 | Msa0355550:CDS | 35.0% | |
| GGTTATAGGTAAAGCCAAAA+TGG | - | chr3_1:30143050-30143069 | Msa0355550:intron | 35.0% | |
| TATTAGTCCTCAAACCAGTT+GGG | + | chr3_1:30143119-30143138 | None:intergenic | 35.0% | |
| TACAGAGGAAAATCTCTTGT+TGG | - | chr3_1:30143189-30143208 | Msa0355550:intron | 35.0% | |
| GGGTAATGTGATTACAATTG+AGG | - | chr3_1:30143422-30143441 | Msa0355550:intron | 35.0% | |
| AATTTGATCAAAGTCGTGTC+TGG | - | chr3_1:30143559-30143578 | Msa0355550:CDS | 35.0% | |
| GCAAAAAGACATGTCATTCT+GGG | - | chr3_1:30143796-30143815 | Msa0355550:intron | 35.0% | |
| CCAACTTGGTTTCTTTCAAT+TGG | + | chr3_1:30143942-30143961 | None:intergenic | 35.0% | |
| CCAATTGAAAGAAACCAAGT+TGG | - | chr3_1:30143939-30143958 | Msa0355550:intron | 35.0% | |
| !! | GGTGTTGTTAAAGGAATCAA+AGG | + | chr3_1:30143967-30143986 | None:intergenic | 35.0% |
| !!! | CCAATGGAAAGTGCATTTTT+TGG | + | chr3_1:30144026-30144045 | None:intergenic | 35.0% |
| CCAAAAAATGCACTTTCCAT+TGG | - | chr3_1:30144023-30144042 | Msa0355550:CDS | 35.0% | |
| ! | GGTTCATTTTACTCTACTCA+AGG | - | chr3_1:30144044-30144063 | Msa0355550:CDS | 35.0% |
| !! | GGTAATGGCAAATTTGTTGA+GGG | + | chr3_1:30144083-30144102 | None:intergenic | 35.0% |
| !! | AGGTAATGGCAAATTTGTTG+AGG | + | chr3_1:30144084-30144103 | None:intergenic | 35.0% |
| TCAACAAATTTGCCATTACC+TGG | - | chr3_1:30144083-30144102 | Msa0355550:CDS | 35.0% | |
| TTATAGACAGAACCAGGTAA+TGG | + | chr3_1:30144098-30144117 | None:intergenic | 35.0% | |
| !! | TTCAGTTTTGTGTAAGGAAG+AGG | - | chr3_1:30142609-30142628 | Msa0355550:CDS | 35.0% |
| CTAATAAGCTCTTCATCAGT+TGG | + | chr3_1:30142670-30142689 | None:intergenic | 35.0% | |
| ! | ATGATTCAAACTTTTCTGCC+AGG | - | chr3_1:30142713-30142732 | Msa0355550:CDS | 35.0% |
| ! | TGATTCAAACTTTTCTGCCA+GGG | - | chr3_1:30142714-30142733 | Msa0355550:CDS | 35.0% |
| ATTTGAACAAATCTGAGCCT+TGG | - | chr3_1:30142752-30142771 | Msa0355550:CDS | 35.0% | |
| TTTGAACAAATCTGAGCCTT+GGG | - | chr3_1:30142753-30142772 | Msa0355550:CDS | 35.0% | |
| TAATCCATATGCACGTAGAT+CGG | - | chr3_1:30142827-30142846 | Msa0355550:CDS | 35.0% | |
| TAAACGAAAAGTCGTACAGA+CGG | - | chr3_1:30142898-30142917 | Msa0355550:CDS | 35.0% | |
| GGTTATAGGTAAAGCCAAAA+TGG | - | chr3_1:30143050-30143069 | Msa0355550:intron | 35.0% | |
| TATTAGTCCTCAAACCAGTT+GGG | + | chr3_1:30143119-30143138 | None:intergenic | 35.0% | |
| TACAGAGGAAAATCTCTTGT+TGG | - | chr3_1:30143189-30143208 | Msa0355550:intron | 35.0% | |
| GGGTAATGTGATTACAATTG+AGG | - | chr3_1:30143422-30143441 | Msa0355550:intron | 35.0% | |
| AATTTGATCAAAGTCGTGTC+TGG | - | chr3_1:30143559-30143578 | Msa0355550:CDS | 35.0% | |
| GCAAAAAGACATGTCATTCT+GGG | - | chr3_1:30143796-30143815 | Msa0355550:intron | 35.0% | |
| CCAACTTGGTTTCTTTCAAT+TGG | + | chr3_1:30143942-30143961 | None:intergenic | 35.0% | |
| CCAATTGAAAGAAACCAAGT+TGG | - | chr3_1:30143939-30143958 | Msa0355550:intron | 35.0% | |
| !! | GGTGTTGTTAAAGGAATCAA+AGG | + | chr3_1:30143967-30143986 | None:intergenic | 35.0% |
| !!! | CCAATGGAAAGTGCATTTTT+TGG | + | chr3_1:30144026-30144045 | None:intergenic | 35.0% |
| CCAAAAAATGCACTTTCCAT+TGG | - | chr3_1:30144023-30144042 | Msa0355550:CDS | 35.0% | |
| ! | GGTTCATTTTACTCTACTCA+AGG | - | chr3_1:30144044-30144063 | Msa0355550:CDS | 35.0% |
| !! | GGTAATGGCAAATTTGTTGA+GGG | + | chr3_1:30144083-30144102 | None:intergenic | 35.0% |
| !! | AGGTAATGGCAAATTTGTTG+AGG | + | chr3_1:30144084-30144103 | None:intergenic | 35.0% |
| TCAACAAATTTGCCATTACC+TGG | - | chr3_1:30144083-30144102 | Msa0355550:CDS | 35.0% | |
| TTATAGACAGAACCAGGTAA+TGG | + | chr3_1:30144098-30144117 | None:intergenic | 35.0% | |
| ! | ATCAGATGATTTTGCCTCCA+GGG | - | chr3_1:30142632-30142651 | Msa0355550:CDS | 40.0% |
| GTTCAAATCCACTTCTCCAA+TGG | + | chr3_1:30142740-30142759 | None:intergenic | 40.0% | |
| AACTTACATGGCAAATCCCA+AGG | + | chr3_1:30142772-30142791 | None:intergenic | 40.0% | |
| AATCCATATGCACGTAGATC+GGG | - | chr3_1:30142828-30142847 | Msa0355550:CDS | 40.0% | |
| !! | CCACTCTTTTTCACCCATTT+TGG | + | chr3_1:30143067-30143086 | None:intergenic | 40.0% |
| CCAAAATGGGTGAAAAAGAG+TGG | - | chr3_1:30143064-30143083 | Msa0355550:intron | 40.0% | |
| !! | AGAGACAAAAAGTACCCAAC+TGG | - | chr3_1:30143102-30143121 | Msa0355550:intron | 40.0% |
| !! | AAAAGTACCCAACTGGTTTG+AGG | - | chr3_1:30143109-30143128 | Msa0355550:intron | 40.0% |
| CTATTAGTCCTCAAACCAGT+TGG | + | chr3_1:30143120-30143139 | None:intergenic | 40.0% | |
| ACTAATAGAGCTACTGAAGC+TGG | - | chr3_1:30143132-30143151 | Msa0355550:intron | 40.0% | |
| TACTGAAGCTGGATATTGGA+AGG | - | chr3_1:30143143-30143162 | Msa0355550:intron | 40.0% | |
| !! | TACAAAGGAAGAGCACCTAA+AGG | - | chr3_1:30143234-30143253 | Msa0355550:intron | 40.0% |
| TAATATGAGCCGTGGCATAA+GGG | - | chr3_1:30143402-30143421 | Msa0355550:intron | 40.0% | |
| ATCACATTACCCTTATGCCA+CGG | + | chr3_1:30143414-30143433 | None:intergenic | 40.0% | |
| ! | TCTTTTGTGGCAGATTGAGT+GGG | - | chr3_1:30143740-30143759 | Msa0355550:intron | 40.0% |
| GGCAAAAAGACATGTCATTC+TGG | - | chr3_1:30143795-30143814 | Msa0355550:intron | 40.0% | |
| !! | CATGTCATTCTGGGATAATG+AGG | - | chr3_1:30143805-30143824 | Msa0355550:intron | 40.0% |
| TAAGGTGATGAATCTGTGAG+TGG | + | chr3_1:30143873-30143892 | None:intergenic | 40.0% | |
| ! | TTCAATTGGATTGGAGAAGC+AGG | + | chr3_1:30143928-30143947 | None:intergenic | 40.0% |
| AGGAATCAAAGGTTCCAACT+TGG | + | chr3_1:30143956-30143975 | None:intergenic | 40.0% | |
| CCATTGTTATAGACAGAACC+AGG | + | chr3_1:30144104-30144123 | None:intergenic | 40.0% | |
| !! | CCTGGTTCTGTCTATAACAA+TGG | - | chr3_1:30144101-30144120 | Msa0355550:CDS | 40.0% |
| ! | ATCAGATGATTTTGCCTCCA+GGG | - | chr3_1:30142632-30142651 | Msa0355550:CDS | 40.0% |
| GTTCAAATCCACTTCTCCAA+TGG | + | chr3_1:30142740-30142759 | None:intergenic | 40.0% | |
| AACTTACATGGCAAATCCCA+AGG | + | chr3_1:30142772-30142791 | None:intergenic | 40.0% | |
| AATCCATATGCACGTAGATC+GGG | - | chr3_1:30142828-30142847 | Msa0355550:CDS | 40.0% | |
| !! | CCACTCTTTTTCACCCATTT+TGG | + | chr3_1:30143067-30143086 | None:intergenic | 40.0% |
| CCAAAATGGGTGAAAAAGAG+TGG | - | chr3_1:30143064-30143083 | Msa0355550:intron | 40.0% | |
| !! | AGAGACAAAAAGTACCCAAC+TGG | - | chr3_1:30143102-30143121 | Msa0355550:intron | 40.0% |
| !! | AAAAGTACCCAACTGGTTTG+AGG | - | chr3_1:30143109-30143128 | Msa0355550:intron | 40.0% |
| CTATTAGTCCTCAAACCAGT+TGG | + | chr3_1:30143120-30143139 | None:intergenic | 40.0% | |
| ACTAATAGAGCTACTGAAGC+TGG | - | chr3_1:30143132-30143151 | Msa0355550:intron | 40.0% | |
| TACTGAAGCTGGATATTGGA+AGG | - | chr3_1:30143143-30143162 | Msa0355550:intron | 40.0% | |
| !! | TACAAAGGAAGAGCACCTAA+AGG | - | chr3_1:30143234-30143253 | Msa0355550:intron | 40.0% |
| TAATATGAGCCGTGGCATAA+GGG | - | chr3_1:30143402-30143421 | Msa0355550:intron | 40.0% | |
| ATCACATTACCCTTATGCCA+CGG | + | chr3_1:30143414-30143433 | None:intergenic | 40.0% | |
| ! | TCTTTTGTGGCAGATTGAGT+GGG | - | chr3_1:30143740-30143759 | Msa0355550:intron | 40.0% |
| GGCAAAAAGACATGTCATTC+TGG | - | chr3_1:30143795-30143814 | Msa0355550:intron | 40.0% | |
| !! | CATGTCATTCTGGGATAATG+AGG | - | chr3_1:30143805-30143824 | Msa0355550:intron | 40.0% |
| TAAGGTGATGAATCTGTGAG+TGG | + | chr3_1:30143873-30143892 | None:intergenic | 40.0% | |
| ! | TTCAATTGGATTGGAGAAGC+AGG | + | chr3_1:30143928-30143947 | None:intergenic | 40.0% |
| AGGAATCAAAGGTTCCAACT+TGG | + | chr3_1:30143956-30143975 | None:intergenic | 40.0% | |
| CCATTGTTATAGACAGAACC+AGG | + | chr3_1:30144104-30144123 | None:intergenic | 40.0% | |
| !! | CCTGGTTCTGTCTATAACAA+TGG | - | chr3_1:30144101-30144120 | Msa0355550:CDS | 40.0% |
| ! | GATCAGATGATTTTGCCTCC+AGG | - | chr3_1:30142631-30142650 | Msa0355550:CDS | 45.0% |
| ! | TGATTTTGCCTCCAGGGTTT+AGG | - | chr3_1:30142638-30142657 | Msa0355550:CDS | 45.0% |
| GTTGGATGAAACCTAAACCC+TGG | + | chr3_1:30142652-30142671 | None:intergenic | 45.0% | |
| ! | TACAGACGGTGCCTTTTGAT+AGG | - | chr3_1:30142912-30142931 | Msa0355550:CDS | 45.0% |
| GAGCTACTGAAGCTGGATAT+TGG | - | chr3_1:30143139-30143158 | Msa0355550:intron | 45.0% | |
| !!! | TTACCTTGGCAGTTTTAGGG+AGG | + | chr3_1:30143320-30143339 | None:intergenic | 45.0% |
| GTAATATGAGCCGTGGCATA+AGG | - | chr3_1:30143401-30143420 | Msa0355550:intron | 45.0% | |
| !! | TCATTGGTGTTGACCTGCAA+GGG | - | chr3_1:30143669-30143688 | Msa0355550:CDS | 45.0% |
| ! | GTCTTTTGTGGCAGATTGAG+TGG | - | chr3_1:30143739-30143758 | Msa0355550:intron | 45.0% |
| ! | AGATTGAGTGGGTGATTTGC+AGG | - | chr3_1:30143751-30143770 | Msa0355550:intron | 45.0% |
| ! | GATTGAGTGGGTGATTTGCA+GGG | - | chr3_1:30143752-30143771 | Msa0355550:intron | 45.0% |
| TCAATTGGTGCAGTTGAAGC+AGG | + | chr3_1:30144155-30144174 | None:intergenic | 45.0% | |
| ! | GATCAGATGATTTTGCCTCC+AGG | - | chr3_1:30142631-30142650 | Msa0355550:CDS | 45.0% |
| ! | TGATTTTGCCTCCAGGGTTT+AGG | - | chr3_1:30142638-30142657 | Msa0355550:CDS | 45.0% |
| GTTGGATGAAACCTAAACCC+TGG | + | chr3_1:30142652-30142671 | None:intergenic | 45.0% | |
| ! | TACAGACGGTGCCTTTTGAT+AGG | - | chr3_1:30142912-30142931 | Msa0355550:CDS | 45.0% |
| GAGCTACTGAAGCTGGATAT+TGG | - | chr3_1:30143139-30143158 | Msa0355550:intron | 45.0% | |
| !!! | TTACCTTGGCAGTTTTAGGG+AGG | + | chr3_1:30143320-30143339 | None:intergenic | 45.0% |
| GTAATATGAGCCGTGGCATA+AGG | - | chr3_1:30143401-30143420 | Msa0355550:intron | 45.0% | |
| !! | TCATTGGTGTTGACCTGCAA+GGG | - | chr3_1:30143669-30143688 | Msa0355550:CDS | 45.0% |
| ! | GTCTTTTGTGGCAGATTGAG+TGG | - | chr3_1:30143739-30143758 | Msa0355550:intron | 45.0% |
| ! | AGATTGAGTGGGTGATTTGC+AGG | - | chr3_1:30143751-30143770 | Msa0355550:intron | 45.0% |
| ! | GATTGAGTGGGTGATTTGCA+GGG | - | chr3_1:30143752-30143771 | Msa0355550:intron | 45.0% |
| TCAATTGGTGCAGTTGAAGC+AGG | + | chr3_1:30144155-30144174 | None:intergenic | 45.0% | |
| GGATGAAACCTAAACCCTGG+AGG | + | chr3_1:30142649-30142668 | None:intergenic | 50.0% | |
| ! | AACTTTTCTGCCAGGGCCAT+TGG | - | chr3_1:30142721-30142740 | Msa0355550:CDS | 50.0% |
| TTGCCCGATCTACGTGCATA+TGG | + | chr3_1:30142834-30142853 | None:intergenic | 50.0% | |
| GCTGGATATTGGAAGGCAAC+AGG | - | chr3_1:30143150-30143169 | Msa0355550:intron | 50.0% | |
| CAACCTCCCTAAAACTGCCA+AGG | - | chr3_1:30143314-30143333 | Msa0355550:intron | 50.0% | |
| TGCGATCGTAATATGAGCCG+TGG | - | chr3_1:30143394-30143413 | Msa0355550:intron | 50.0% | |
| !! | GGTCGCATCGACTACAATTG+AGG | - | chr3_1:30143443-30143462 | Msa0355550:intron | 50.0% |
| !!! | GTTACGGGTCGTGTTGGTTT+TGG | + | chr3_1:30143605-30143624 | None:intergenic | 50.0% |
| TCACATGTTACGGGTCGTGT+TGG | + | chr3_1:30143611-30143630 | None:intergenic | 50.0% | |
| !! | CTCATTGGTGTTGACCTGCA+AGG | - | chr3_1:30143668-30143687 | Msa0355550:CDS | 50.0% |
| AACACGACACTAACCCTTGC+AGG | + | chr3_1:30143685-30143704 | None:intergenic | 50.0% | |
| GGTGATGAATCTGTGAGTGG+TGG | + | chr3_1:30143870-30143889 | None:intergenic | 50.0% | |
| TTGGAGAAGCAGGACACGTA+AGG | + | chr3_1:30143918-30143937 | None:intergenic | 50.0% | |
| ! | GTGCAGTTGAAGCAGGTTGA+TGG | + | chr3_1:30144148-30144167 | None:intergenic | 50.0% |
| GGATGAAACCTAAACCCTGG+AGG | + | chr3_1:30142649-30142668 | None:intergenic | 50.0% | |
| ! | AACTTTTCTGCCAGGGCCAT+TGG | - | chr3_1:30142721-30142740 | Msa0355550:CDS | 50.0% |
| TTGCCCGATCTACGTGCATA+TGG | + | chr3_1:30142834-30142853 | None:intergenic | 50.0% | |
| GCTGGATATTGGAAGGCAAC+AGG | - | chr3_1:30143150-30143169 | Msa0355550:intron | 50.0% | |
| CAACCTCCCTAAAACTGCCA+AGG | - | chr3_1:30143314-30143333 | Msa0355550:intron | 50.0% | |
| TGCGATCGTAATATGAGCCG+TGG | - | chr3_1:30143394-30143413 | Msa0355550:intron | 50.0% | |
| !! | GGTCGCATCGACTACAATTG+AGG | - | chr3_1:30143443-30143462 | Msa0355550:intron | 50.0% |
| !!! | GTTACGGGTCGTGTTGGTTT+TGG | + | chr3_1:30143605-30143624 | None:intergenic | 50.0% |
| TCACATGTTACGGGTCGTGT+TGG | + | chr3_1:30143611-30143630 | None:intergenic | 50.0% | |
| !! | CTCATTGGTGTTGACCTGCA+AGG | - | chr3_1:30143668-30143687 | Msa0355550:CDS | 50.0% |
| AACACGACACTAACCCTTGC+AGG | + | chr3_1:30143685-30143704 | None:intergenic | 50.0% | |
| GGTGATGAATCTGTGAGTGG+TGG | + | chr3_1:30143870-30143889 | None:intergenic | 50.0% | |
| TTGGAGAAGCAGGACACGTA+AGG | + | chr3_1:30143918-30143937 | None:intergenic | 50.0% | |
| ! | GTGCAGTTGAAGCAGGTTGA+TGG | + | chr3_1:30144148-30144167 | None:intergenic | 50.0% |
| ATCCACTTCTCCAATGGCCC+TGG | + | chr3_1:30142734-30142753 | None:intergenic | 55.0% | |
| ATCCACTTCTCCAATGGCCC+TGG | + | chr3_1:30142734-30142753 | None:intergenic | 55.0% | |
| TGCCAGGGCCATTGGAGAAG+TGG | - | chr3_1:30142729-30142748 | Msa0355550:CDS | 60.0% | |
| TGCCAGGGCCATTGGAGAAG+TGG | - | chr3_1:30142729-30142748 | Msa0355550:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 30142598 | 30144199 | 30142598 | ID=Msa0355550;Name=Msa0355550 |
| chr3_1 | mRNA | 30142598 | 30144199 | 30142598 | ID=Msa0355550-mRNA-1;Parent=Msa0355550;Name=Msa0355550-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.5|0|1|1|1|3|0|303 |
| chr3_1 | exon | 30144013 | 30144199 | 30144013 | ID=Msa0355550-mRNA-1:exon:6196;Parent=Msa0355550-mRNA-1 |
| chr3_1 | exon | 30143462 | 30143739 | 30143462 | ID=Msa0355550-mRNA-1:exon:6195;Parent=Msa0355550-mRNA-1 |
| chr3_1 | exon | 30142598 | 30143044 | 30142598 | ID=Msa0355550-mRNA-1:exon:6194;Parent=Msa0355550-mRNA-1 |
| chr3_1 | CDS | 30144013 | 30144199 | 30144013 | ID=Msa0355550-mRNA-1:cds;Parent=Msa0355550-mRNA-1 |
| chr3_1 | CDS | 30143462 | 30143739 | 30143462 | ID=Msa0355550-mRNA-1:cds;Parent=Msa0355550-mRNA-1 |
| chr3_1 | CDS | 30142598 | 30143044 | 30142598 | ID=Msa0355550-mRNA-1:cds;Parent=Msa0355550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
