AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1137210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1137210 MtrunA17_Chr7g0259161 99.714 350 1 0 1 350 1 350 0.0 726
Msa1137210 MtrunA17_Chr1g0196311 84.286 350 49 4 1 350 17 360 0.0 613
Msa1137210 MtrunA17_Chr1g0191301 70.370 351 96 6 1 350 1 344 0.0 510
Msa1137210 MtrunA17_Chr6g0477161 40.764 314 178 4 35 347 378 684 5.31e-76 247
Msa1137210 MtrunA17_Chr6g0477161 40.663 332 188 5 17 347 12 335 7.92e-76 246
Msa1137210 MtrunA17_Chr6g0477251 38.484 343 202 4 6 347 554 888 8.68e-75 247
Msa1137210 MtrunA17_Chr6g0477251 37.168 339 204 4 10 347 4 334 2.18e-69 233
Msa1137210 MtrunA17_Chr6g0477231 35.294 340 215 4 9 347 1 336 7.90e-73 229
Msa1137210 MtrunA17_Chr6g0477271 36.283 339 198 5 11 346 28 351 3.30e-64 207
Msa1137210 MtrunA17_Chr6g0477241 37.557 221 129 3 36 254 41 254 1.83e-49 167
Msa1137210 MtrunA17_Chr4g0025291 34.797 296 160 8 61 346 43 315 1.12e-42 150
Msa1137210 MtrunA17_Chr7g0214851 33.013 312 169 11 61 347 54 350 5.91e-39 141
Msa1137210 MtrunA17_Chr7g0268091 35.345 232 136 6 106 327 69 296 8.64e-38 137
Msa1137210 MtrunA17_Chr1g0210121 31.987 297 161 8 69 346 68 342 3.59e-37 137
Msa1137210 MtrunA17_Chr1g0149271 31.579 304 179 9 63 346 13 307 1.47e-36 134
Msa1137210 MtrunA17_Chr1g0204211 37.143 210 111 5 78 283 83 275 3.03e-36 134
Msa1137210 MtrunA17_Chr8g0351211 32.308 260 157 5 99 346 64 316 5.77e-35 130
Msa1137210 MtrunA17_Chr7g0235741 34.749 259 143 8 106 350 107 353 6.79e-35 130
Msa1137210 MtrunA17_Chr6g0474411 32.231 242 144 5 32 268 22 248 1.15e-34 129
Msa1137210 MtrunA17_Chr6g0474631 34.496 258 155 8 100 347 72 325 2.75e-34 128
Msa1137210 MtrunA17_Chr3g0081521 33.750 240 147 5 97 328 79 314 3.71e-34 128
Msa1137210 MtrunA17_Chr6g0474541 32.787 244 138 7 32 268 47 271 6.60e-34 128
Msa1137210 MtrunA17_Chr4g0045181 31.699 306 178 10 53 347 33 318 8.97e-34 127
Msa1137210 MtrunA17_Chr6g0474471 32.584 267 163 5 69 329 54 309 1.09e-33 127
Msa1137210 MtrunA17_Chr4g0045131 27.666 347 209 12 27 346 23 354 3.78e-33 126
Msa1137210 MtrunA17_Chr6g0474491 34.274 248 136 6 78 314 62 293 6.51e-33 124
Msa1137210 MtrunA17_Chr6g0458881 30.662 287 147 5 80 329 146 417 1.06e-32 126
Msa1137210 MtrunA17_Chr3g0095711 31.419 296 169 12 72 346 86 368 9.79e-32 122
Msa1137210 MtrunA17_Chr1g0204201 38.012 171 97 3 106 268 78 247 1.30e-30 118
Msa1137210 MtrunA17_Chr4g0045121 31.225 253 151 7 106 346 76 317 2.65e-30 117
Msa1137210 MtrunA17_Chr8g0351201 29.457 258 165 5 101 347 74 325 6.47e-30 117
Msa1137210 MtrunA17_Chr8g0351171 29.139 302 181 9 25 315 8 287 7.31e-30 116
Msa1137210 MtrunA17_Chr3g0133701 30.769 312 171 12 53 347 32 315 1.92e-29 115
Msa1137210 MtrunA17_Chr7g0228721 30.657 274 132 6 106 329 165 430 5.96e-29 116
Msa1137210 MtrunA17_Chr8g0353951 28.228 333 197 14 32 347 22 329 2.87e-27 109
Msa1137210 MtrunA17_Chr5g0394251 29.042 334 190 15 25 340 9 313 2.96e-26 107
Msa1137210 MtrunA17_Chr4g0045191 29.949 197 116 5 38 231 31 208 4.24e-26 106
Msa1137210 MtrunA17_Chr1g0205871 29.000 300 171 11 38 320 21 295 9.84e-25 102
Msa1137210 MtrunA17_Chr7g0233871 30.976 297 164 12 69 347 53 326 3.54e-24 101
Msa1137210 MtrunA17_Chr5g0394241 27.124 306 171 13 23 308 12 285 1.72e-23 99.4
Msa1137210 MtrunA17_Chr5g0394211 27.703 296 171 11 38 316 56 325 6.10e-22 95.5
Msa1137210 MtrunA17_Chr1g0205791 31.641 256 134 10 69 311 51 278 8.42e-21 92.0
Msa1137210 MtrunA17_Chr1g0205781 31.154 260 134 11 69 311 53 284 1.95e-20 90.5
Msa1137210 MtrunA17_Chr6g0474611 32.941 170 103 6 186 347 5 171 2.40e-13 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1137210 AT3G63010.1 72.622 347 90 3 1 347 1 342 0.0 543
Msa1137210 AT5G27320.1 68.946 351 100 6 1 350 1 343 1.10e-177 496
Msa1137210 AT3G05120.1 66.382 351 111 5 1 350 1 345 7.63e-173 484
Msa1137210 AT5G23530.1 34.911 338 193 7 15 347 12 327 2.92e-62 202
Msa1137210 AT5G16080.1 32.026 306 173 7 59 349 59 344 7.88e-44 154
Msa1137210 AT1G68620.1 35.656 244 131 6 69 306 65 288 1.90e-42 150
Msa1137210 AT5G62180.1 30.597 268 170 5 32 294 15 271 9.89e-40 143
Msa1137210 AT2G45600.1 33.188 229 139 3 106 322 66 292 5.54e-35 130
Msa1137210 AT5G14310.1 32.331 266 135 5 106 329 151 413 4.27e-33 128
Msa1137210 AT2G03550.1 31.481 324 176 12 39 347 19 311 7.65e-33 124
Msa1137210 AT1G19190.1 35.439 285 141 14 53 321 30 287 1.51e-32 124
Msa1137210 AT1G47480.1 29.283 321 195 11 33 347 16 310 2.00e-32 123
Msa1137210 AT5G06570.1 35.338 266 155 9 96 347 64 326 4.75e-32 123
Msa1137210 AT5G06570.2 35.338 266 155 9 96 347 64 326 4.75e-32 123
Msa1137210 AT5G06570.3 35.338 266 155 9 96 347 79 341 7.05e-32 122
Msa1137210 AT5G06570.4 35.338 266 155 9 96 347 79 341 7.05e-32 122
Msa1137210 AT2G45610.1 28.720 289 179 6 69 347 53 324 3.71e-30 117
Msa1137210 AT3G27320.2 28.736 348 171 9 56 329 51 395 7.29e-29 116
Msa1137210 AT3G27320.1 30.717 293 145 6 78 329 152 427 2.85e-28 114
Msa1137210 AT3G48690.1 32.463 268 147 11 50 302 27 275 1.50e-27 110
Msa1137210 AT3G48700.1 31.034 319 178 14 50 346 27 325 2.63e-27 110
Msa1137210 AT1G49650.1 32.090 268 154 8 53 311 86 334 1.61e-26 108
Msa1137210 AT1G49640.1 29.183 257 154 9 56 308 40 272 1.55e-24 102
Msa1137210 AT1G49660.1 30.303 264 159 6 53 308 30 276 1.18e-23 99.8

Find 99 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTTGATGGTTTGGAATTT+GGG 0.103998 7_4:-5932209 Msa1137210:three_prime_UTR
TTGGTTGATGGTTTGGAATT+TGG 0.150301 7_4:-5932210 Msa1137210:three_prime_UTR
ACAATTTCTGTTGTACTTAA+TGG 0.166515 7_4:+5933168 None:intergenic
TGGCTTATGTGGATGGTTTA+AGG 0.186814 7_4:-5932561 Msa1137210:CDS
GTGGATGGTTTAAGGAATTT+TGG 0.215905 7_4:-5932553 Msa1137210:CDS
TGATCATTTCTATTGCCTTA+TGG 0.245202 7_4:-5932467 Msa1137210:CDS
ATTCTTCTTCATCCTTTGTT+TGG 0.284217 7_4:-5932811 Msa1137210:CDS
GGAGATTGAAGATTAGGTAT+TGG 0.296630 7_4:-5932229 Msa1137210:three_prime_UTR
TAGAGAGGAGATTGAAGATT+AGG 0.310621 7_4:-5932235 Msa1137210:three_prime_UTR
GCAGAAGGAATTGAAGTGTT+AGG 0.327890 7_4:-5932838 Msa1137210:CDS
AAAAGTCTTGTTTGTGTGGC+TGG 0.337676 7_4:-5932610 Msa1137210:CDS
GAAGATTAGGTATTGGTTGA+TGG 0.338553 7_4:-5932222 Msa1137210:three_prime_UTR
CAATAGAAATGATCATTATT+AGG 0.341519 7_4:+5932475 None:intergenic
TGGTCTCTATCTTCACCTTC+TGG 0.343587 7_4:+5932697 None:intergenic
AATGGGTGAAGTCAAGAAAA+TGG 0.346501 7_4:-5932963 Msa1137210:CDS
TTAGGTATTGGTTGATGGTT+TGG 0.346685 7_4:-5932217 Msa1137210:three_prime_UTR
GATTCTGAAATGAGATTAGA+TGG 0.348082 7_4:-5932772 Msa1137210:CDS
TCTTGTTTGTGTGGCTGGTT+TGG 0.349537 7_4:-5932605 Msa1137210:CDS
TACAAGATCGTGATTGGTAT+TGG 0.350184 7_4:-5932732 Msa1137210:CDS
TACCTTAAGGAGGCTACTAT+TGG 0.351911 7_4:-5932511 Msa1137210:CDS
TGTTAAACTTCTTTACCTTA+AGG 0.362269 7_4:-5932524 Msa1137210:CDS
CTTCTTCATCCTTTGTTTGG+TGG 0.365813 7_4:-5932808 Msa1137210:CDS
GAGAAAGAACAGAATAATAA+TGG 0.371342 7_4:+5933873 None:intergenic
AAGTAATAGTATTAACAGTT+AGG 0.372219 7_4:+5932421 None:intergenic
TTTAAGTACACACCATTACT+TGG 0.398396 7_4:+5932304 None:intergenic
TTCAGAAAATGAATCTCAAT+GGG 0.401908 7_4:-5933211 Msa1137210:CDS
AGTTCTTGATTTCCTCCATA+AGG 0.402550 7_4:+5932452 None:intergenic
TTAGATTACAAGATCGTGAT+TGG 0.411360 7_4:-5932738 Msa1137210:CDS
AAAGTTTATGTTTACATGGC+AGG 0.415400 7_4:-5932919 Msa1137210:CDS
AGTTACTATTATAACATCTA+TGG 0.415455 7_4:-5932268 Msa1137210:three_prime_UTR
AGTCCCGGCAAATGCTATTC+CGG 0.421368 7_4:-5933307 Msa1137210:CDS
AACCAATAGTAGCCTCCTTA+AGG 0.425272 7_4:+5932509 None:intergenic
TTGTAAAGCTGCTGTTGTTT+CGG 0.428335 7_4:-5933052 Msa1137210:CDS
CACCCTGCTTGTAACCCGTT+TGG 0.430827 7_4:-5932676 Msa1137210:CDS
TGTAACCCGTTTGGTCCAAA+AGG 0.441552 7_4:-5932667 Msa1137210:CDS
TACATGGCAGGTGATAGTTC+TGG 0.444051 7_4:-5932907 Msa1137210:CDS
GAAGTGATGTGGGTTAGAAA+AGG 0.453473 7_4:+5934012 None:intergenic
CAGAAGGAATTGAAGTGTTA+GGG 0.454064 7_4:-5932837 Msa1137210:CDS
CTTCAGAAAATGAATCTCAA+TGG 0.456710 7_4:-5933212 Msa1137210:CDS
TCATTAGTACCAGTCATGTC+TGG 0.474445 7_4:+5933833 None:intergenic
AGATTGGCAATTGGCTTATG+TGG 0.475777 7_4:-5932572 Msa1137210:CDS
AAGTGATGTGGGTTAGAAAA+GGG 0.491006 7_4:+5934013 None:intergenic
GGTTAATTACCGACGATCAC+CGG 0.491592 7_4:-5933031 Msa1137210:CDS
GGACCAAACGGGTTACAAGC+AGG 0.492003 7_4:+5932673 None:intergenic
ATAAGAACATATGTATTCAA+TGG 0.496984 7_4:+5933414 None:intergenic
AAGTCAACCTCAGTGAATCC+AGG 0.499269 7_4:-5933811 Msa1137210:CDS
GTAACCCGTTTGGTCCAAAA+GGG 0.503887 7_4:-5932666 Msa1137210:CDS
CATGTGCTTATGAAGATGGC+TGG 0.506515 7_4:-5932996 Msa1137210:CDS
CCTGTCATAGTATTCTTCCA+TGG 0.508891 7_4:-5933144 Msa1137210:CDS
GGTTGATGGTTTGGAATTTG+GGG 0.512139 7_4:-5932208 Msa1137210:three_prime_UTR
TCCTAAAAGTCTTGTTTGTG+TGG 0.514991 7_4:-5932614 Msa1137210:CDS
ATGGCTGGAATGCACTCAAA+TGG 0.521371 7_4:-5932981 Msa1137210:CDS
AAAGAAAGTTTATGTTTACA+TGG 0.521453 7_4:-5932923 Msa1137210:CDS
AAGGGATTGAGTAAAGAAGA+AGG 0.523828 7_4:+5934122 None:intergenic
TTTCCATGTGCTTATGAAGA+TGG 0.528955 7_4:-5933000 Msa1137210:CDS
TGGCAATTGGCTTATGTGGA+TGG 0.532054 7_4:-5932568 Msa1137210:CDS
GGTGTATTAATTGAAGAGAA+GGG 0.534817 7_4:+5934104 None:intergenic
TGGTGTATTAATTGAAGAGA+AGG 0.535556 7_4:+5934103 None:intergenic
ACGTATAAGTTTAATCTCAA+AGG 0.545836 7_4:+5934076 None:intergenic
CAAGAAACTCTGCTAAATCT+CGG 0.546001 7_4:+5933337 None:intergenic
AGAAGAAAGCGTGATCCTCA+TGG 0.546168 7_4:+5933943 None:intergenic
ATAAGTTTAATCTCAAAGGT+TGG 0.547903 7_4:+5934080 None:intergenic
CATGGAGAAGAGAACAAAAG+AGG 0.550114 7_4:+5933961 None:intergenic
GTTTCTTGACAGAAAAGTCC+CGG 0.552120 7_4:-5933322 Msa1137210:CDS
TCGACCGGAATAGCATTTGC+CGG 0.555684 7_4:+5933303 None:intergenic
CGACCGGAATAGCATTTGCC+GGG 0.556973 7_4:+5933304 None:intergenic
GACCAAACGGGTTACAAGCA+GGG 0.558028 7_4:+5932674 None:intergenic
CAAGAAAATGGCTTCAAAGT+GGG 0.561680 7_4:-5932951 Msa1137210:CDS
GCAAATGCTATTCCGGTCGA+TGG 0.562535 7_4:-5933300 Msa1137210:CDS
CCATGGAAGAATACTATGAC+AGG 0.563416 7_4:+5933144 None:intergenic
TGAAAGAGTTGAAGTGATGT+GGG 0.563904 7_4:+5934002 None:intergenic
TGGCTGGAATGCACTCAAAT+GGG 0.565881 7_4:-5932980 Msa1137210:CDS
GATAAAAGTGTACGTAGCGT+AGG 0.567364 7_4:+5934044 None:intergenic
GTGAAAGAGTTGAAGTGATG+TGG 0.567567 7_4:+5934001 None:intergenic
ACCGATACTCCGGTGATCGT+CGG 0.572460 7_4:+5933022 None:intergenic
TAAACTTCTTTACCTTAAGG+AGG 0.574148 7_4:-5932521 Msa1137210:CDS
AATCTTCTAAGAAGAGCAGA+TGG 0.579373 7_4:-5933369 Msa1137210:CDS
TCAGTAATTAGTACTACAAG+AGG 0.584693 7_4:+5932175 None:intergenic
TACAACTAACCAGACATGAC+TGG 0.594054 7_4:-5933842 Msa1137210:exon
TCATTTCTATTGCCTTATGG+AGG 0.599565 7_4:-5932464 Msa1137210:CDS
TGTAGCAGTAAAAGCTTGTG+AGG 0.600327 7_4:-5932866 Msa1137210:CDS
AAAAGTGTACGTAGCGTAGG+TGG 0.602061 7_4:+5934047 None:intergenic
CAGCCATCTTCATAAGCACA+TGG 0.605205 7_4:+5932997 None:intergenic
AATGAAAAGACTCCATCGAC+CGG 0.605436 7_4:+5933288 None:intergenic
TCAAGAAAATGGCTTCAAAG+TGG 0.615492 7_4:-5932952 Msa1137210:CDS
AGTTTAATCTCAAAGGTTGG+TGG 0.616241 7_4:+5934083 None:intergenic
TACTATTATAACATCTATGG+TGG 0.625048 7_4:-5932265 Msa1137210:three_prime_UTR
GCACATGGAAACCGATACTC+CGG 0.625683 7_4:+5933012 None:intergenic
ATGGCAGGTGATAGTTCTGG+TGG 0.630946 7_4:-5932904 Msa1137210:CDS
GATCATATCGAACGAAACAC+CGG 0.631025 7_4:-5933264 Msa1137210:CDS
AGTCAACCTCAGTGAATCCA+GGG 0.636231 7_4:-5933810 Msa1137210:intron
ATAAACACGATTGAATAGAC+CGG 0.640482 7_4:+5933245 None:intergenic
TAACCCGTTTGGTCCAAAAG+GGG 0.642733 7_4:-5932665 Msa1137210:CDS
AATGAGAGAAGCTTCCACCA+TGG 0.652602 7_4:+5933127 None:intergenic
GTCATAGTATTCTTCCATGG+TGG 0.656265 7_4:-5933141 Msa1137210:CDS
ACTAATTACTGAATGTGACA+TGG 0.657158 7_4:-5932164 Msa1137210:three_prime_UTR
TCAGAAAATGAATCTCAATG+GGG 0.736042 7_4:-5933210 Msa1137210:CDS
ATATTACCCTGGATTCACTG+AGG 0.739496 7_4:+5933804 None:intergenic
CAAACGGGTTACAAGCAGGG+TGG 0.789743 7_4:+5932677 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAATAAATAAAAAGAGAAA+GGG + chr7_4:5932377-5932396 None:intergenic 15.0%
!! AGAAATAAATAAAAAGAGAA+AGG + chr7_4:5932378-5932397 None:intergenic 15.0%
!!! AAAAACAAAATTTTCTAAGA+TGG + chr7_4:5932521-5932540 None:intergenic 15.0%
!! GAAATAAATAAAAAGAGAAA+GGG + chr7_4:5932377-5932396 None:intergenic 15.0%
!! AGAAATAAATAAAAAGAGAA+AGG + chr7_4:5932378-5932397 None:intergenic 15.0%
!!! AAAAACAAAATTTTCTAAGA+TGG + chr7_4:5932521-5932540 None:intergenic 15.0%
!! TAAACTTTAACATATGTGAT+TGG - chr7_4:5932597-5932616 Msa1137210:CDS 20.0%
!!! ATCATGTAATATTTTTCTGT+GGG - chr7_4:5932632-5932651 Msa1137210:CDS 20.0%
!! AGAAAAATGAAACAAATCTT+GGG + chr7_4:5932792-5932811 None:intergenic 20.0%
!! AAGAAAAATGAAACAAATCT+TGG + chr7_4:5932793-5932812 None:intergenic 20.0%
!! ATAAGAACATATGTATTCAA+TGG + chr7_4:5932880-5932899 None:intergenic 20.0%
!! AAAGAAAGTTTATGTTTACA+TGG - chr7_4:5933368-5933387 Msa1137210:CDS 20.0%
!!! TTAATATTTTTTTCCCCTTT+TGG + chr7_4:5933642-5933661 None:intergenic 20.0%
!! AAAGGGGAAAAAAATATTAA+AGG - chr7_4:5933642-5933661 Msa1137210:intron 20.0%
!! CAATAGAAATGATCATTATT+AGG + chr7_4:5933819-5933838 None:intergenic 20.0%
!! AAGTAATAGTATTAACAGTT+AGG + chr7_4:5933873-5933892 None:intergenic 20.0%
!!! AAAAGCTTGAATTTTTCATT+TGG - chr7_4:5933913-5933932 Msa1137210:five_prime_UTR 20.0%
!!! AAAGCTTGAATTTTTCATTT+GGG - chr7_4:5933914-5933933 Msa1137210:five_prime_UTR 20.0%
!! AGTTACTATTATAACATCTA+TGG - chr7_4:5934023-5934042 Msa1137210:five_prime_UTR 20.0%
!! TAAACTTTAACATATGTGAT+TGG - chr7_4:5932597-5932616 Msa1137210:CDS 20.0%
!!! ATCATGTAATATTTTTCTGT+GGG - chr7_4:5932632-5932651 Msa1137210:CDS 20.0%
!! AGAAAAATGAAACAAATCTT+GGG + chr7_4:5932792-5932811 None:intergenic 20.0%
!! AAGAAAAATGAAACAAATCT+TGG + chr7_4:5932793-5932812 None:intergenic 20.0%
!! ATAAGAACATATGTATTCAA+TGG + chr7_4:5932880-5932899 None:intergenic 20.0%
!! AAAGAAAGTTTATGTTTACA+TGG - chr7_4:5933368-5933387 Msa1137210:CDS 20.0%
!!! TTAATATTTTTTTCCCCTTT+TGG + chr7_4:5933642-5933661 None:intergenic 20.0%
!! AAAGGGGAAAAAAATATTAA+AGG - chr7_4:5933642-5933661 Msa1137210:intron 20.0%
!! CAATAGAAATGATCATTATT+AGG + chr7_4:5933819-5933838 None:intergenic 20.0%
!! AAGTAATAGTATTAACAGTT+AGG + chr7_4:5933873-5933892 None:intergenic 20.0%
!!! AAAAGCTTGAATTTTTCATT+TGG - chr7_4:5933913-5933932 Msa1137210:five_prime_UTR 20.0%
!!! AAAGCTTGAATTTTTCATTT+GGG - chr7_4:5933914-5933933 Msa1137210:five_prime_UTR 20.0%
!! AGTTACTATTATAACATCTA+TGG - chr7_4:5934023-5934042 Msa1137210:five_prime_UTR 20.0%
! ATAAGTTTAATCTCAAAGGT+TGG + chr7_4:5932214-5932233 None:intergenic 25.0%
! ACGTATAAGTTTAATCTCAA+AGG + chr7_4:5932218-5932237 None:intergenic 25.0%
! GAGAAAGAACAGAATAATAA+TGG + chr7_4:5932421-5932440 None:intergenic 25.0%
!!! TTTGCTTTGTTTTTGATGTT+GGG - chr7_4:5932560-5932579 Msa1137210:CDS 25.0%
!! GATCATGTAATATTTTTCTG+TGG - chr7_4:5932631-5932650 Msa1137210:CDS 25.0%
!! AGTTTCTTCTTTTTATGTGT+TGG - chr7_4:5932692-5932711 Msa1137210:CDS 25.0%
!! GTTTCTTCTTTTTATGTGTT+GGG - chr7_4:5932693-5932712 Msa1137210:CDS 25.0%
! TCATTATGTGTCACAATAAT+TGG - chr7_4:5932750-5932769 Msa1137210:CDS 25.0%
! GCAAAACAATAACTTTAGAT+TGG + chr7_4:5932846-5932865 None:intergenic 25.0%
! TTCAGAAAATGAATCTCAAT+GGG - chr7_4:5933080-5933099 Msa1137210:CDS 25.0%
! ACAATTTCTGTTGTACTTAA+TGG + chr7_4:5933126-5933145 None:intergenic 25.0%
!! TCTATGATACATTTTGTAGA+AGG - chr7_4:5933205-5933224 Msa1137210:CDS 25.0%
! TGTTAAACTTCTTTACCTTA+AGG - chr7_4:5933767-5933786 Msa1137210:intron 25.0%
!! TTCAAGCTTTTGTTAAGTAA+GGG + chr7_4:5933904-5933923 None:intergenic 25.0%
!! ATTCAAGCTTTTGTTAAGTA+AGG + chr7_4:5933905-5933924 None:intergenic 25.0%
!! TTATTTTCTTCTCCAAGTAA+TGG - chr7_4:5933975-5933994 Msa1137210:five_prime_UTR 25.0%
! TACTATTATAACATCTATGG+TGG - chr7_4:5934026-5934045 Msa1137210:five_prime_UTR 25.0%
! ATAAGTTTAATCTCAAAGGT+TGG + chr7_4:5932214-5932233 None:intergenic 25.0%
! ACGTATAAGTTTAATCTCAA+AGG + chr7_4:5932218-5932237 None:intergenic 25.0%
! GAGAAAGAACAGAATAATAA+TGG + chr7_4:5932421-5932440 None:intergenic 25.0%
!!! TTTGCTTTGTTTTTGATGTT+GGG - chr7_4:5932560-5932579 Msa1137210:CDS 25.0%
!! GATCATGTAATATTTTTCTG+TGG - chr7_4:5932631-5932650 Msa1137210:CDS 25.0%
!! AGTTTCTTCTTTTTATGTGT+TGG - chr7_4:5932692-5932711 Msa1137210:CDS 25.0%
!! GTTTCTTCTTTTTATGTGTT+GGG - chr7_4:5932693-5932712 Msa1137210:CDS 25.0%
! TCATTATGTGTCACAATAAT+TGG - chr7_4:5932750-5932769 Msa1137210:CDS 25.0%
! GCAAAACAATAACTTTAGAT+TGG + chr7_4:5932846-5932865 None:intergenic 25.0%
! TTCAGAAAATGAATCTCAAT+GGG - chr7_4:5933080-5933099 Msa1137210:CDS 25.0%
! ACAATTTCTGTTGTACTTAA+TGG + chr7_4:5933126-5933145 None:intergenic 25.0%
!! TCTATGATACATTTTGTAGA+AGG - chr7_4:5933205-5933224 Msa1137210:CDS 25.0%
! TGTTAAACTTCTTTACCTTA+AGG - chr7_4:5933767-5933786 Msa1137210:intron 25.0%
!! TTCAAGCTTTTGTTAAGTAA+GGG + chr7_4:5933904-5933923 None:intergenic 25.0%
!! ATTCAAGCTTTTGTTAAGTA+AGG + chr7_4:5933905-5933924 None:intergenic 25.0%
!! TTATTTTCTTCTCCAAGTAA+TGG - chr7_4:5933975-5933994 Msa1137210:five_prime_UTR 25.0%
! TACTATTATAACATCTATGG+TGG - chr7_4:5934026-5934045 Msa1137210:five_prime_UTR 25.0%
GGTGTATTAATTGAAGAGAA+GGG + chr7_4:5932190-5932209 None:intergenic 30.0%
TGGTGTATTAATTGAAGAGA+AGG + chr7_4:5932191-5932210 None:intergenic 30.0%
AGAGGAATAGAAAAAAACGT+TGG + chr7_4:5932315-5932334 None:intergenic 30.0%
!!! GTTTGCTTTGTTTTTGATGT+TGG - chr7_4:5932559-5932578 Msa1137210:CDS 30.0%
!!! ATATTTTTCTGTGGGTTAGT+TGG - chr7_4:5932640-5932659 Msa1137210:CDS 30.0%
! GGTTTCTTGTTATGGTAAAT+TGG - chr7_4:5932714-5932733 Msa1137210:CDS 30.0%
ATAAACACGATTGAATAGAC+CGG + chr7_4:5933049-5933068 None:intergenic 30.0%
!! GATTCATTTTCTGAAGATGA+TGG + chr7_4:5933075-5933094 None:intergenic 30.0%
CTTCAGAAAATGAATCTCAA+TGG - chr7_4:5933079-5933098 Msa1137210:CDS 30.0%
TCAGAAAATGAATCTCAATG+GGG - chr7_4:5933081-5933100 Msa1137210:CDS 30.0%
AAAGTTTATGTTTACATGGC+AGG - chr7_4:5933372-5933391 Msa1137210:CDS 30.0%
ATTCTTCTTCATCCTTTGTT+TGG - chr7_4:5933480-5933499 Msa1137210:intron 30.0%
!! GATTCTGAAATGAGATTAGA+TGG - chr7_4:5933519-5933538 Msa1137210:intron 30.0%
TTAGATTACAAGATCGTGAT+TGG - chr7_4:5933553-5933572 Msa1137210:intron 30.0%
! GTTTGGATCTTTTACAAGAT+TGG - chr7_4:5933703-5933722 Msa1137210:intron 30.0%
! TCTTTTACAAGATTGGCAAT+TGG - chr7_4:5933710-5933729 Msa1137210:intron 30.0%
TAAACTTCTTTACCTTAAGG+AGG - chr7_4:5933770-5933789 Msa1137210:intron 30.0%
TGATCATTTCTATTGCCTTA+TGG - chr7_4:5933824-5933843 Msa1137210:CDS 30.0%
TTTAAGTACACACCATTACT+TGG + chr7_4:5933990-5934009 None:intergenic 30.0%
TCAGTAATTAGTACTACAAG+AGG + chr7_4:5934119-5934138 None:intergenic 30.0%
ACTAATTACTGAATGTGACA+TGG - chr7_4:5934127-5934146 Msa1137210:five_prime_UTR 30.0%
GGTGTATTAATTGAAGAGAA+GGG + chr7_4:5932190-5932209 None:intergenic 30.0%
TGGTGTATTAATTGAAGAGA+AGG + chr7_4:5932191-5932210 None:intergenic 30.0%
AGAGGAATAGAAAAAAACGT+TGG + chr7_4:5932315-5932334 None:intergenic 30.0%
!!! GTTTGCTTTGTTTTTGATGT+TGG - chr7_4:5932559-5932578 Msa1137210:CDS 30.0%
!!! ATATTTTTCTGTGGGTTAGT+TGG - chr7_4:5932640-5932659 Msa1137210:CDS 30.0%
! GGTTTCTTGTTATGGTAAAT+TGG - chr7_4:5932714-5932733 Msa1137210:CDS 30.0%
ATAAACACGATTGAATAGAC+CGG + chr7_4:5933049-5933068 None:intergenic 30.0%
!! GATTCATTTTCTGAAGATGA+TGG + chr7_4:5933075-5933094 None:intergenic 30.0%
CTTCAGAAAATGAATCTCAA+TGG - chr7_4:5933079-5933098 Msa1137210:CDS 30.0%
TCAGAAAATGAATCTCAATG+GGG - chr7_4:5933081-5933100 Msa1137210:CDS 30.0%
AAAGTTTATGTTTACATGGC+AGG - chr7_4:5933372-5933391 Msa1137210:CDS 30.0%
ATTCTTCTTCATCCTTTGTT+TGG - chr7_4:5933480-5933499 Msa1137210:intron 30.0%
!! GATTCTGAAATGAGATTAGA+TGG - chr7_4:5933519-5933538 Msa1137210:intron 30.0%
TTAGATTACAAGATCGTGAT+TGG - chr7_4:5933553-5933572 Msa1137210:intron 30.0%
! GTTTGGATCTTTTACAAGAT+TGG - chr7_4:5933703-5933722 Msa1137210:intron 30.0%
! TCTTTTACAAGATTGGCAAT+TGG - chr7_4:5933710-5933729 Msa1137210:intron 30.0%
TAAACTTCTTTACCTTAAGG+AGG - chr7_4:5933770-5933789 Msa1137210:intron 30.0%
TGATCATTTCTATTGCCTTA+TGG - chr7_4:5933824-5933843 Msa1137210:CDS 30.0%
TTTAAGTACACACCATTACT+TGG + chr7_4:5933990-5934009 None:intergenic 30.0%
TCAGTAATTAGTACTACAAG+AGG + chr7_4:5934119-5934138 None:intergenic 30.0%
ACTAATTACTGAATGTGACA+TGG - chr7_4:5934127-5934146 Msa1137210:five_prime_UTR 30.0%
AAGGGATTGAGTAAAGAAGA+AGG + chr7_4:5932172-5932191 None:intergenic 35.0%
AGTTTAATCTCAAAGGTTGG+TGG + chr7_4:5932211-5932230 None:intergenic 35.0%
!! AAGTGATGTGGGTTAGAAAA+GGG + chr7_4:5932281-5932300 None:intergenic 35.0%
TGAAAGAGTTGAAGTGATGT+GGG + chr7_4:5932292-5932311 None:intergenic 35.0%
TGGAAGATGATATATTACCC+TGG + chr7_4:5932501-5932520 None:intergenic 35.0%
ATGTGTTGGGTTTCTTGTTA+TGG - chr7_4:5932706-5932725 Msa1137210:CDS 35.0%
! AATCTTCTAAGAAGAGCAGA+TGG - chr7_4:5932922-5932941 Msa1137210:CDS 35.0%
CAAGAAACTCTGCTAAATCT+CGG + chr7_4:5932957-5932976 None:intergenic 35.0%
! TTGTAAAGCTGCTGTTGTTT+CGG - chr7_4:5933239-5933258 Msa1137210:CDS 35.0%
TTTCCATGTGCTTATGAAGA+TGG - chr7_4:5933291-5933310 Msa1137210:CDS 35.0%
AATGGGTGAAGTCAAGAAAA+TGG - chr7_4:5933328-5933347 Msa1137210:CDS 35.0%
TCAAGAAAATGGCTTCAAAG+TGG - chr7_4:5933339-5933358 Msa1137210:CDS 35.0%
CAAGAAAATGGCTTCAAAGT+GGG - chr7_4:5933340-5933359 Msa1137210:CDS 35.0%
! CAGAAGGAATTGAAGTGTTA+GGG - chr7_4:5933454-5933473 Msa1137210:intron 35.0%
!!! CTTTTTTCACCACCAAACAA+AGG + chr7_4:5933495-5933514 None:intergenic 35.0%
TACAAGATCGTGATTGGTAT+TGG - chr7_4:5933559-5933578 Msa1137210:intron 35.0%
!! TCCTAAAAGTCTTGTTTGTG+TGG - chr7_4:5933677-5933696 Msa1137210:intron 35.0%
! GTGGATGGTTTAAGGAATTT+TGG - chr7_4:5933738-5933757 Msa1137210:intron 35.0%
TCATTTCTATTGCCTTATGG+AGG - chr7_4:5933827-5933846 Msa1137210:CDS 35.0%
AGTTCTTGATTTCCTCCATA+AGG + chr7_4:5933842-5933861 None:intergenic 35.0%
! CTTTTGTTAAGTAAGGGTGA+AGG + chr7_4:5933898-5933917 None:intergenic 35.0%
!! TATGGTGGTCAATTTTAGAG+AGG - chr7_4:5934041-5934060 Msa1137210:five_prime_UTR 35.0%
TAGAGAGGAGATTGAAGATT+AGG - chr7_4:5934056-5934075 Msa1137210:five_prime_UTR 35.0%
GGAGATTGAAGATTAGGTAT+TGG - chr7_4:5934062-5934081 Msa1137210:five_prime_UTR 35.0%
!! GAAGATTAGGTATTGGTTGA+TGG - chr7_4:5934069-5934088 Msa1137210:five_prime_UTR 35.0%
!! TTAGGTATTGGTTGATGGTT+TGG - chr7_4:5934074-5934093 Msa1137210:five_prime_UTR 35.0%
!! TTGGTTGATGGTTTGGAATT+TGG - chr7_4:5934081-5934100 Msa1137210:five_prime_UTR 35.0%
!! TGGTTGATGGTTTGGAATTT+GGG - chr7_4:5934082-5934101 Msa1137210:five_prime_UTR 35.0%
AAGGGATTGAGTAAAGAAGA+AGG + chr7_4:5932172-5932191 None:intergenic 35.0%
AGTTTAATCTCAAAGGTTGG+TGG + chr7_4:5932211-5932230 None:intergenic 35.0%
!! AAGTGATGTGGGTTAGAAAA+GGG + chr7_4:5932281-5932300 None:intergenic 35.0%
TGAAAGAGTTGAAGTGATGT+GGG + chr7_4:5932292-5932311 None:intergenic 35.0%
TGGAAGATGATATATTACCC+TGG + chr7_4:5932501-5932520 None:intergenic 35.0%
ATGTGTTGGGTTTCTTGTTA+TGG - chr7_4:5932706-5932725 Msa1137210:CDS 35.0%
! AATCTTCTAAGAAGAGCAGA+TGG - chr7_4:5932922-5932941 Msa1137210:CDS 35.0%
CAAGAAACTCTGCTAAATCT+CGG + chr7_4:5932957-5932976 None:intergenic 35.0%
! TTGTAAAGCTGCTGTTGTTT+CGG - chr7_4:5933239-5933258 Msa1137210:CDS 35.0%
TTTCCATGTGCTTATGAAGA+TGG - chr7_4:5933291-5933310 Msa1137210:CDS 35.0%
AATGGGTGAAGTCAAGAAAA+TGG - chr7_4:5933328-5933347 Msa1137210:CDS 35.0%
TCAAGAAAATGGCTTCAAAG+TGG - chr7_4:5933339-5933358 Msa1137210:CDS 35.0%
CAAGAAAATGGCTTCAAAGT+GGG - chr7_4:5933340-5933359 Msa1137210:CDS 35.0%
! CAGAAGGAATTGAAGTGTTA+GGG - chr7_4:5933454-5933473 Msa1137210:intron 35.0%
!!! CTTTTTTCACCACCAAACAA+AGG + chr7_4:5933495-5933514 None:intergenic 35.0%
TACAAGATCGTGATTGGTAT+TGG - chr7_4:5933559-5933578 Msa1137210:intron 35.0%
!! TCCTAAAAGTCTTGTTTGTG+TGG - chr7_4:5933677-5933696 Msa1137210:intron 35.0%
! GTGGATGGTTTAAGGAATTT+TGG - chr7_4:5933738-5933757 Msa1137210:intron 35.0%
TCATTTCTATTGCCTTATGG+AGG - chr7_4:5933827-5933846 Msa1137210:CDS 35.0%
AGTTCTTGATTTCCTCCATA+AGG + chr7_4:5933842-5933861 None:intergenic 35.0%
! CTTTTGTTAAGTAAGGGTGA+AGG + chr7_4:5933898-5933917 None:intergenic 35.0%
!! TATGGTGGTCAATTTTAGAG+AGG - chr7_4:5934041-5934060 Msa1137210:five_prime_UTR 35.0%
TAGAGAGGAGATTGAAGATT+AGG - chr7_4:5934056-5934075 Msa1137210:five_prime_UTR 35.0%
GGAGATTGAAGATTAGGTAT+TGG - chr7_4:5934062-5934081 Msa1137210:five_prime_UTR 35.0%
!! GAAGATTAGGTATTGGTTGA+TGG - chr7_4:5934069-5934088 Msa1137210:five_prime_UTR 35.0%
!! TTAGGTATTGGTTGATGGTT+TGG - chr7_4:5934074-5934093 Msa1137210:five_prime_UTR 35.0%
!! TTGGTTGATGGTTTGGAATT+TGG - chr7_4:5934081-5934100 Msa1137210:five_prime_UTR 35.0%
!! TGGTTGATGGTTTGGAATTT+GGG - chr7_4:5934082-5934101 Msa1137210:five_prime_UTR 35.0%
! GATAAAAGTGTACGTAGCGT+AGG + chr7_4:5932250-5932269 None:intergenic 40.0%
!! GAAGTGATGTGGGTTAGAAA+AGG + chr7_4:5932282-5932301 None:intergenic 40.0%
GTGAAAGAGTTGAAGTGATG+TGG + chr7_4:5932293-5932312 None:intergenic 40.0%
CATGGAGAAGAGAACAAAAG+AGG + chr7_4:5932333-5932352 None:intergenic 40.0%
! CTTTTGTTCTCTTCTCCATG+AGG - chr7_4:5932333-5932352 Msa1137210:three_prime_UTR 40.0%
TACAACTAACCAGACATGAC+TGG - chr7_4:5932449-5932468 Msa1137210:CDS 40.0%
TCATTAGTACCAGTCATGTC+TGG + chr7_4:5932461-5932480 None:intergenic 40.0%
ATATTACCCTGGATTCACTG+AGG + chr7_4:5932490-5932509 None:intergenic 40.0%
!! GTGGGTTAGTTGGCTTAATT+TGG - chr7_4:5932650-5932669 Msa1137210:CDS 40.0%
GTTTCTTGACAGAAAAGTCC+CGG - chr7_4:5932969-5932988 Msa1137210:CDS 40.0%
AATGAAAAGACTCCATCGAC+CGG + chr7_4:5933006-5933025 None:intergenic 40.0%
GATCATATCGAACGAAACAC+CGG - chr7_4:5933027-5933046 Msa1137210:CDS 40.0%
CCATGGAAGAATACTATGAC+AGG + chr7_4:5933150-5933169 None:intergenic 40.0%
CCTGTCATAGTATTCTTCCA+TGG - chr7_4:5933147-5933166 Msa1137210:CDS 40.0%
GTCATAGTATTCTTCCATGG+TGG - chr7_4:5933150-5933169 Msa1137210:CDS 40.0%
TGTAGCAGTAAAAGCTTGTG+AGG - chr7_4:5933425-5933444 Msa1137210:CDS 40.0%
! GCAGAAGGAATTGAAGTGTT+AGG - chr7_4:5933453-5933472 Msa1137210:intron 40.0%
! CTTCTTCATCCTTTGTTTGG+TGG - chr7_4:5933483-5933502 Msa1137210:intron 40.0%
!!! TGGAGAGCTTTTTTACCAGA+AGG - chr7_4:5933579-5933598 Msa1137210:intron 40.0%
! TTTTCCCCTTTTGGACCAAA+CGG + chr7_4:5933633-5933652 None:intergenic 40.0%
! GCCACACAAACAAGACTTTT+AGG + chr7_4:5933681-5933700 None:intergenic 40.0%
!! AAAAGTCTTGTTTGTGTGGC+TGG - chr7_4:5933681-5933700 Msa1137210:intron 40.0%
! AGATTGGCAATTGGCTTATG+TGG - chr7_4:5933719-5933738 Msa1137210:intron 40.0%
TGGCTTATGTGGATGGTTTA+AGG - chr7_4:5933730-5933749 Msa1137210:intron 40.0%
TACCTTAAGGAGGCTACTAT+TGG - chr7_4:5933780-5933799 Msa1137210:intron 40.0%
AACCAATAGTAGCCTCCTTA+AGG + chr7_4:5933785-5933804 None:intergenic 40.0%
!! GGTTGATGGTTTGGAATTTG+GGG - chr7_4:5934083-5934102 Msa1137210:five_prime_UTR 40.0%
! GATAAAAGTGTACGTAGCGT+AGG + chr7_4:5932250-5932269 None:intergenic 40.0%
!! GAAGTGATGTGGGTTAGAAA+AGG + chr7_4:5932282-5932301 None:intergenic 40.0%
GTGAAAGAGTTGAAGTGATG+TGG + chr7_4:5932293-5932312 None:intergenic 40.0%
CATGGAGAAGAGAACAAAAG+AGG + chr7_4:5932333-5932352 None:intergenic 40.0%
! CTTTTGTTCTCTTCTCCATG+AGG - chr7_4:5932333-5932352 Msa1137210:three_prime_UTR 40.0%
TACAACTAACCAGACATGAC+TGG - chr7_4:5932449-5932468 Msa1137210:CDS 40.0%
TCATTAGTACCAGTCATGTC+TGG + chr7_4:5932461-5932480 None:intergenic 40.0%
ATATTACCCTGGATTCACTG+AGG + chr7_4:5932490-5932509 None:intergenic 40.0%
!! GTGGGTTAGTTGGCTTAATT+TGG - chr7_4:5932650-5932669 Msa1137210:CDS 40.0%
GTTTCTTGACAGAAAAGTCC+CGG - chr7_4:5932969-5932988 Msa1137210:CDS 40.0%
AATGAAAAGACTCCATCGAC+CGG + chr7_4:5933006-5933025 None:intergenic 40.0%
GATCATATCGAACGAAACAC+CGG - chr7_4:5933027-5933046 Msa1137210:CDS 40.0%
CCATGGAAGAATACTATGAC+AGG + chr7_4:5933150-5933169 None:intergenic 40.0%
CCTGTCATAGTATTCTTCCA+TGG - chr7_4:5933147-5933166 Msa1137210:CDS 40.0%
GTCATAGTATTCTTCCATGG+TGG - chr7_4:5933150-5933169 Msa1137210:CDS 40.0%
TGTAGCAGTAAAAGCTTGTG+AGG - chr7_4:5933425-5933444 Msa1137210:CDS 40.0%
! GCAGAAGGAATTGAAGTGTT+AGG - chr7_4:5933453-5933472 Msa1137210:intron 40.0%
! CTTCTTCATCCTTTGTTTGG+TGG - chr7_4:5933483-5933502 Msa1137210:intron 40.0%
!!! TGGAGAGCTTTTTTACCAGA+AGG - chr7_4:5933579-5933598 Msa1137210:intron 40.0%
! TTTTCCCCTTTTGGACCAAA+CGG + chr7_4:5933633-5933652 None:intergenic 40.0%
! GCCACACAAACAAGACTTTT+AGG + chr7_4:5933681-5933700 None:intergenic 40.0%
!! AAAAGTCTTGTTTGTGTGGC+TGG - chr7_4:5933681-5933700 Msa1137210:intron 40.0%
! AGATTGGCAATTGGCTTATG+TGG - chr7_4:5933719-5933738 Msa1137210:intron 40.0%
TGGCTTATGTGGATGGTTTA+AGG - chr7_4:5933730-5933749 Msa1137210:intron 40.0%
TACCTTAAGGAGGCTACTAT+TGG - chr7_4:5933780-5933799 Msa1137210:intron 40.0%
AACCAATAGTAGCCTCCTTA+AGG + chr7_4:5933785-5933804 None:intergenic 40.0%
!! GGTTGATGGTTTGGAATTTG+GGG - chr7_4:5934083-5934102 Msa1137210:five_prime_UTR 40.0%
! AAAAGTGTACGTAGCGTAGG+TGG + chr7_4:5932247-5932266 None:intergenic 45.0%
! AGAAGAAAGCGTGATCCTCA+TGG + chr7_4:5932351-5932370 None:intergenic 45.0%
AAGTCAACCTCAGTGAATCC+AGG - chr7_4:5932480-5932499 Msa1137210:CDS 45.0%
AGTCAACCTCAGTGAATCCA+GGG - chr7_4:5932481-5932500 Msa1137210:CDS 45.0%
AATGAGAGAAGCTTCCACCA+TGG + chr7_4:5933167-5933186 None:intergenic 45.0%
GGTTAATTACCGACGATCAC+CGG - chr7_4:5933260-5933279 Msa1137210:CDS 45.0%
CAGCCATCTTCATAAGCACA+TGG + chr7_4:5933297-5933316 None:intergenic 45.0%
CATGTGCTTATGAAGATGGC+TGG - chr7_4:5933295-5933314 Msa1137210:CDS 45.0%
ATGGCTGGAATGCACTCAAA+TGG - chr7_4:5933310-5933329 Msa1137210:CDS 45.0%
TGGCTGGAATGCACTCAAAT+GGG - chr7_4:5933311-5933330 Msa1137210:CDS 45.0%
TACATGGCAGGTGATAGTTC+TGG - chr7_4:5933384-5933403 Msa1137210:CDS 45.0%
GCTTGTGAGGAAAAAGCAGA+AGG - chr7_4:5933438-5933457 Msa1137210:intron 45.0%
TGGTCTCTATCTTCACCTTC+TGG + chr7_4:5933597-5933616 None:intergenic 45.0%
TGTAACCCGTTTGGTCCAAA+AGG - chr7_4:5933624-5933643 Msa1137210:intron 45.0%
GTAACCCGTTTGGTCCAAAA+GGG - chr7_4:5933625-5933644 Msa1137210:intron 45.0%
TAACCCGTTTGGTCCAAAAG+GGG - chr7_4:5933626-5933645 Msa1137210:intron 45.0%
! TTTCCCCTTTTGGACCAAAC+GGG + chr7_4:5933632-5933651 None:intergenic 45.0%
! TCTTGTTTGTGTGGCTGGTT+TGG - chr7_4:5933686-5933705 Msa1137210:intron 45.0%
! TGGCAATTGGCTTATGTGGA+TGG - chr7_4:5933723-5933742 Msa1137210:intron 45.0%
! AAAAGTGTACGTAGCGTAGG+TGG + chr7_4:5932247-5932266 None:intergenic 45.0%
! AGAAGAAAGCGTGATCCTCA+TGG + chr7_4:5932351-5932370 None:intergenic 45.0%
AAGTCAACCTCAGTGAATCC+AGG - chr7_4:5932480-5932499 Msa1137210:CDS 45.0%
AGTCAACCTCAGTGAATCCA+GGG - chr7_4:5932481-5932500 Msa1137210:CDS 45.0%
AATGAGAGAAGCTTCCACCA+TGG + chr7_4:5933167-5933186 None:intergenic 45.0%
GGTTAATTACCGACGATCAC+CGG - chr7_4:5933260-5933279 Msa1137210:CDS 45.0%
CAGCCATCTTCATAAGCACA+TGG + chr7_4:5933297-5933316 None:intergenic 45.0%
CATGTGCTTATGAAGATGGC+TGG - chr7_4:5933295-5933314 Msa1137210:CDS 45.0%
ATGGCTGGAATGCACTCAAA+TGG - chr7_4:5933310-5933329 Msa1137210:CDS 45.0%
TGGCTGGAATGCACTCAAAT+GGG - chr7_4:5933311-5933330 Msa1137210:CDS 45.0%
TACATGGCAGGTGATAGTTC+TGG - chr7_4:5933384-5933403 Msa1137210:CDS 45.0%
GCTTGTGAGGAAAAAGCAGA+AGG - chr7_4:5933438-5933457 Msa1137210:intron 45.0%
TGGTCTCTATCTTCACCTTC+TGG + chr7_4:5933597-5933616 None:intergenic 45.0%
TGTAACCCGTTTGGTCCAAA+AGG - chr7_4:5933624-5933643 Msa1137210:intron 45.0%
GTAACCCGTTTGGTCCAAAA+GGG - chr7_4:5933625-5933644 Msa1137210:intron 45.0%
TAACCCGTTTGGTCCAAAAG+GGG - chr7_4:5933626-5933645 Msa1137210:intron 45.0%
! TTTCCCCTTTTGGACCAAAC+GGG + chr7_4:5933632-5933651 None:intergenic 45.0%
! TCTTGTTTGTGTGGCTGGTT+TGG - chr7_4:5933686-5933705 Msa1137210:intron 45.0%
! TGGCAATTGGCTTATGTGGA+TGG - chr7_4:5933723-5933742 Msa1137210:intron 45.0%
AGTCCCGGCAAATGCTATTC+CGG - chr7_4:5932984-5933003 Msa1137210:CDS 50.0%
TCGACCGGAATAGCATTTGC+CGG + chr7_4:5932991-5933010 None:intergenic 50.0%
GCAAATGCTATTCCGGTCGA+TGG - chr7_4:5932991-5933010 Msa1137210:CDS 50.0%
GCACATGGAAACCGATACTC+CGG + chr7_4:5933282-5933301 None:intergenic 50.0%
!! ATGGCAGGTGATAGTTCTGG+TGG - chr7_4:5933387-5933406 Msa1137210:CDS 50.0%
!! GACCAAACGGGTTACAAGCA+GGG + chr7_4:5933620-5933639 None:intergenic 50.0%
AGTCCCGGCAAATGCTATTC+CGG - chr7_4:5932984-5933003 Msa1137210:CDS 50.0%
TCGACCGGAATAGCATTTGC+CGG + chr7_4:5932991-5933010 None:intergenic 50.0%
GCAAATGCTATTCCGGTCGA+TGG - chr7_4:5932991-5933010 Msa1137210:CDS 50.0%
GCACATGGAAACCGATACTC+CGG + chr7_4:5933282-5933301 None:intergenic 50.0%
!! ATGGCAGGTGATAGTTCTGG+TGG - chr7_4:5933387-5933406 Msa1137210:CDS 50.0%
!! GACCAAACGGGTTACAAGCA+GGG + chr7_4:5933620-5933639 None:intergenic 50.0%
CGACCGGAATAGCATTTGCC+GGG + chr7_4:5932990-5933009 None:intergenic 55.0%
ACCGACGATCACCGGAGTAT+CGG - chr7_4:5933268-5933287 Msa1137210:CDS 55.0%
ACCGATACTCCGGTGATCGT+CGG + chr7_4:5933272-5933291 None:intergenic 55.0%
!! CAAACGGGTTACAAGCAGGG+TGG + chr7_4:5933617-5933636 None:intergenic 55.0%
CACCCTGCTTGTAACCCGTT+TGG - chr7_4:5933615-5933634 Msa1137210:intron 55.0%
!! GGACCAAACGGGTTACAAGC+AGG + chr7_4:5933621-5933640 None:intergenic 55.0%
CGACCGGAATAGCATTTGCC+GGG + chr7_4:5932990-5933009 None:intergenic 55.0%
ACCGACGATCACCGGAGTAT+CGG - chr7_4:5933268-5933287 Msa1137210:CDS 55.0%
ACCGATACTCCGGTGATCGT+CGG + chr7_4:5933272-5933291 None:intergenic 55.0%
!! CAAACGGGTTACAAGCAGGG+TGG + chr7_4:5933617-5933636 None:intergenic 55.0%
CACCCTGCTTGTAACCCGTT+TGG - chr7_4:5933615-5933634 Msa1137210:intron 55.0%
!! GGACCAAACGGGTTACAAGC+AGG + chr7_4:5933621-5933640 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 5932152 5934161 5932152 ID=Msa1137210;Name=Msa1137210
chr7_4 mRNA 5932152 5934161 5932152 ID=Msa1137210-mRNA-1;Parent=Msa1137210;Name=Msa1137210-mRNA-1;_AED=0.01;_eAED=0.01;_QI=312|1|1|1|1|1|2|280|350
chr7_4 exon 5932152 5933445 5932152 ID=Msa1137210-mRNA-1:exon:1642;Parent=Msa1137210-mRNA-1
chr7_4 exon 5933811 5934161 5933811 ID=Msa1137210-mRNA-1:exon:1641;Parent=Msa1137210-mRNA-1
chr7_4 five_prime_UTR 5933850 5934161 5933850 ID=Msa1137210-mRNA-1:five_prime_utr;Parent=Msa1137210-mRNA-1
chr7_4 CDS 5933811 5933849 5933811 ID=Msa1137210-mRNA-1:cds;Parent=Msa1137210-mRNA-1
chr7_4 CDS 5932432 5933445 5932432 ID=Msa1137210-mRNA-1:cds;Parent=Msa1137210-mRNA-1
chr7_4 three_prime_UTR 5932152 5932431 5932152 ID=Msa1137210-mRNA-1:three_prime_utr;Parent=Msa1137210-mRNA-1
Gene Sequence

>Msa1137210

ATGACTGGTACTAATGAAGTCAACCTCAGTGAATCCAGGAGTGTTGTTCCATTGAATACATATGTTCTTATCTCAAATTTCAAGCTTGCTTACAATCTTCTAAGAAGAGCAGATGGAACATTCAACCGAGATTTAGCAGAGTTTCTTGACAGAAAAGTCCCGGCAAATGCTATTCCGGTCGATGGAGTCTTTTCATTCGATCATATCGAACGAAACACCGGTCTATTCAATCGTGTTTATCTACCATCATCTTCAGAAAATGAATCTCAATGGGGTGTCAAAGATTTAGAGAAACCATTAAGTACAACAGAAATTGTTCCTGTCATAGTATTCTTCCATGGTGGAAGCTTCTCTCATTCTTCAGCAAACAGTGCTATCTATGATACATTTTGTAGAAGGTTAGTAAGTGTTTGTAAAGCTGCTGTTGTTTCGGTTAATTACCGACGATCACCGGAGTATCGGTTTCCATGTGCTTATGAAGATGGCTGGAATGCACTCAAATGGGTGAAGTCAAGAAAATGGCTTCAAAGTGGGAAAGAAAAGAAAGTTTATGTTTACATGGCAGGTGATAGTTCTGGTGGAAACATTGTTCATCATGTAGCAGTAAAAGCTTGTGAGGAAAAAGCAGAAGGAATTGAAGTGTTAGGGAACATTCTTCTTCATCCTTTGTTTGGTGGTGAAAAAAGAACAGATTCTGAAATGAGATTAGATGGAAAGTACTTTGTTAGATTACAAGATCGTGATTGGTATTGGAGAGCTTTTTTACCAGAAGGTGAAGATAGAGACCACCCTGCTTGTAACCCGTTTGGTCCAAAAGGGGAAAAAAATATTAAAGGACTTGATAAATTTCCTAAAAGTCTTGTTTGTGTGGCTGGTTTGGATCTTTTACAAGATTGGCAATTGGCTTATGTGGATGGTTTAAGGAATTTTGGTCAAGATGTTAAACTTCTTTACCTTAAGGAGGCTACTATTGGTTTTTACTTCTTGCCTAATAATGATCATTTCTATTGCCTTATGGAGGAAATCAAGAACTTTGTTAATCCTAACTGTTAA

Protein sequence

>Msa1137210

MTGTNEVNLSESRSVVPLNTYVLISNFKLAYNLLRRADGTFNRDLAEFLDRKVPANAIPVDGVFSFDHIERNTGLFNRVYLPSSSENESQWGVKDLEKPLSTTEIVPVIVFFHGGSFSHSSANSAIYDTFCRRLVSVCKAAVVSVNYRRSPEYRFPCAYEDGWNALKWVKSRKWLQSGKEKKVYVYMAGDSSGGNIVHHVAVKACEEKAEGIEVLGNILLHPLFGGEKRTDSEMRLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPKGEKNIKGLDKFPKSLVCVAGLDLLQDWQLAYVDGLRNFGQDVKLLYLKEATIGFYFLPNNDHFYCLMEEIKNFVNPNC*