Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0511300 | XP_039687423.1 | 95.096 | 469 | 12 | 2 | 1 | 458 | 2083 | 2551 | 0.0 | 924 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0511300 | sp|Q9M3G7|ATM_ARATH | 78.465 | 469 | 90 | 2 | 1 | 458 | 3388 | 3856 | 0.0 | 778 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0511300 | G7J5G3 | 95.096 | 469 | 12 | 2 | 1 | 458 | 2565 | 3033 | 0.0 | 924 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032090 | Msa0511300 | 0.829789 | 4.228169e-55 | -8.615850e-47 |
| Msa0032430 | Msa0511300 | 0.802888 | 4.530662e-49 | -8.615850e-47 |
| Msa0079380 | Msa0511300 | 0.822661 | 2.101855e-53 | -8.615850e-47 |
| Msa0127050 | Msa0511300 | 0.800219 | 1.596853e-48 | -8.615850e-47 |
| Msa0172070 | Msa0511300 | 0.803142 | 4.014955e-49 | -8.615850e-47 |
| Msa0465410 | Msa0511300 | 0.840163 | 1.026056e-57 | -8.615850e-47 |
| Msa0511270 | Msa0511300 | 0.862756 | 4.045598e-64 | -8.615850e-47 |
| Msa0511300 | Msa0511370 | 0.911352 | 6.701202e-83 | -8.615850e-47 |
| Msa0511300 | Msa0643560 | 0.804037 | 2.618069e-49 | -8.615850e-47 |
| Msa0511300 | Msa1171710 | 0.861206 | 1.207171e-63 | -8.615850e-47 |
| Msa0511300 | Msa1324100 | 0.800467 | 1.421567e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0511300 | MtrunA17_Chr3g0117611 | 95.096 | 469 | 12 | 2 | 1 | 458 | 2565 | 3033 | 0.0 | 924 |
| Msa0511300 | MtrunA17_Chr1g0211551 | 37.203 | 379 | 183 | 8 | 106 | 458 | 2372 | 2721 | 4.16e-71 | 245 |
| Msa0511300 | MtrunA17_Chr5g0393901 | 29.976 | 417 | 187 | 12 | 125 | 454 | 2069 | 2467 | 5.57e-47 | 174 |
| Msa0511300 | MtrunA17_Chr4g0034061 | 33.779 | 299 | 156 | 8 | 116 | 373 | 1982 | 2279 | 7.54e-41 | 156 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0511300 | AT3G48190.2 | 78.465 | 469 | 90 | 2 | 1 | 458 | 2545 | 3013 | 0.0 | 775 |
| Msa0511300 | AT3G48190.3 | 78.465 | 469 | 90 | 2 | 1 | 458 | 2521 | 2989 | 0.0 | 775 |
| Msa0511300 | AT5G40820.2 | 35.990 | 414 | 210 | 10 | 69 | 458 | 2321 | 2703 | 1.01e-73 | 253 |
| Msa0511300 | AT5G40820.1 | 35.990 | 414 | 210 | 10 | 69 | 458 | 2320 | 2702 | 1.02e-73 | 253 |
| Msa0511300 | AT5G40820.4 | 35.990 | 414 | 210 | 10 | 69 | 458 | 2320 | 2702 | 1.02e-73 | 253 |
| Msa0511300 | AT5G40820.3 | 35.990 | 414 | 210 | 10 | 69 | 458 | 2320 | 2702 | 1.02e-73 | 253 |
| Msa0511300 | AT1G50030.2 | 35.401 | 274 | 161 | 6 | 116 | 375 | 2042 | 2313 | 4.66e-47 | 175 |
| Msa0511300 | AT1G50030.1 | 35.401 | 274 | 161 | 6 | 116 | 375 | 2069 | 2340 | 4.67e-47 | 175 |
| Msa0511300 | AT4G36080.2 | 20.811 | 370 | 235 | 12 | 131 | 458 | 3451 | 3804 | 1.11e-13 | 74.3 |
| Msa0511300 | AT4G36080.1 | 20.811 | 370 | 235 | 12 | 131 | 458 | 3481 | 3834 | 1.13e-13 | 74.3 |
| Msa0511300 | AT4G36080.3 | 20.811 | 370 | 235 | 12 | 131 | 458 | 3456 | 3809 | 1.24e-13 | 74.3 |
Find 117 sgRNAs with CRISPR-Local
Find 493 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGTCTCTTGTGAGCCTAAA+TGG | 0.227901 | 3_4:+60801688 | None:intergenic |
| GGACAAGCGCAAAGCATTTC+AGG | 0.231262 | 3_4:-60803129 | Msa0511300:CDS |
| TTCTTCTCCATGTATCTTGA+TGG | 0.269308 | 3_4:+60805848 | None:intergenic |
| ACACCAGCACTTGGAGTAAA+AGG | 0.279441 | 3_4:+60805049 | None:intergenic |
| AGGAAGTTTGCAGGAATTTC+AGG | 0.292786 | 3_4:-60803109 | Msa0511300:intron |
| TAGGTAATGGAACAATTCTT+TGG | 0.297548 | 3_4:-60805895 | Msa0511300:CDS |
| GTGCCAAATGTTTCCTGGTT+GGG | 0.312642 | 3_4:-60800387 | Msa0511300:CDS |
| ACAGGAAATGGACGTTGATT+TGG | 0.314638 | 3_4:-60801234 | Msa0511300:intron |
| TATCAAAGACATACCCGTTC+TGG | 0.316121 | 3_4:+60802200 | None:intergenic |
| TACGCTGTTTATCCTTTATA+CGG | 0.319478 | 3_4:+60808385 | None:intergenic |
| TATCGGCAACTTGCAAAATC+TGG | 0.327219 | 3_4:-60806704 | Msa0511300:CDS |
| AAGTTCATTTGTCGTGGATA+TGG | 0.329725 | 3_4:-60808358 | Msa0511300:CDS |
| TGTGCTGGCAGGTTCCATTT+AGG | 0.332916 | 3_4:-60801702 | Msa0511300:intron |
| GTTGGTTATATTGTTGGCCT+TGG | 0.341107 | 3_4:-60802323 | Msa0511300:CDS |
| CAAGTGCTGGTGTTCTTGAA+TGG | 0.347529 | 3_4:-60805039 | Msa0511300:CDS |
| TCCTAAAGTGGTTGAGTGCT+TGG | 0.348865 | 3_4:-60806744 | Msa0511300:CDS |
| AAACGAGTATGAAGGAAATA+AGG | 0.355055 | 3_4:-60801189 | Msa0511300:CDS |
| TTCATACAGCATCCTGTCTT+AGG | 0.360690 | 3_4:+60806672 | None:intergenic |
| CCCAAGCACTCAACCACTTT+AGG | 0.361416 | 3_4:+60806743 | None:intergenic |
| GGTGTTCTTGAATGGGTTAA+TGG | 0.362165 | 3_4:-60805031 | Msa0511300:CDS |
| AAGATGACAACTCATTTAGA+AGG | 0.368388 | 3_4:+60808313 | None:intergenic |
| GGCAAATGGTGACCGTATAA+AGG | 0.369215 | 3_4:-60808397 | Msa0511300:CDS |
| TGTTTCCTGGTTGGGGAGCT+TGG | 0.376721 | 3_4:-60800379 | Msa0511300:CDS |
| ATGGACGTTGATTTGGATAC+AGG | 0.377455 | 3_4:-60801227 | Msa0511300:CDS |
| ATTCAGGTTGGTTATATTGT+TGG | 0.381689 | 3_4:-60802329 | Msa0511300:intron |
| CGATTGTGCCAAATGTTTCC+TGG | 0.384146 | 3_4:-60800392 | Msa0511300:CDS |
| AAGCATTTCAGGAAGTTTGC+AGG | 0.389566 | 3_4:-60803118 | Msa0511300:CDS |
| TAGCTTCTGGCCCTGGCAAA+TGG | 0.393494 | 3_4:-60808411 | None:intergenic |
| CGTTGATTTGGATACAGGTT+TGG | 0.397662 | 3_4:-60801222 | Msa0511300:CDS |
| AAGTGTTGCTGCTAGTTCTA+TGG | 0.412166 | 3_4:-60802837 | Msa0511300:intron |
| CCTAAAGTGGTTGAGTGCTT+GGG | 0.417225 | 3_4:-60806743 | Msa0511300:CDS |
| TGCCAAATGTTTCCTGGTTG+GGG | 0.432472 | 3_4:-60800386 | Msa0511300:CDS |
| TTATATCAAACTTGCTGAGA+TGG | 0.437673 | 3_4:-60808164 | Msa0511300:CDS |
| CTCTTGTCAAACCACTCAGC+TGG | 0.443188 | 3_4:+60802875 | None:intergenic |
| GAGGTTGTTCACATTGATCT+TGG | 0.446090 | 3_4:-60802257 | Msa0511300:CDS |
| TTATACGGTCACCATTTGCC+AGG | 0.446671 | 3_4:+60808400 | None:intergenic |
| ATTGATGGAATGGGTATAAC+TGG | 0.446804 | 3_4:-60801664 | Msa0511300:CDS |
| GTTGAGTGCTTGGGTTCTGA+TGG | 0.449761 | 3_4:-60806734 | Msa0511300:CDS |
| AAGTGCTGGTGTTCTTGAAT+GGG | 0.450933 | 3_4:-60805038 | Msa0511300:CDS |
| ATCAAAGACATACCCGTTCT+GGG | 0.453325 | 3_4:+60802201 | None:intergenic |
| CTCCCCAACCAGGAAACATT+TGG | 0.456644 | 3_4:+60800384 | None:intergenic |
| ATGTATCTTGATGGTTCCTC+AGG | 0.459929 | 3_4:+60805857 | None:intergenic |
| CTCACAAGAGACGTAATTGA+TGG | 0.460252 | 3_4:-60801679 | Msa0511300:CDS |
| GAAAGCTTTGCAGCGTCAAA+AGG | 0.462002 | 3_4:-60801425 | Msa0511300:intron |
| GTTCTGATGGCTGTAGATAT+CGG | 0.463029 | 3_4:-60806721 | Msa0511300:CDS |
| TCTGCTAATCCTTTGAAGTA+AGG | 0.463135 | 3_4:+60806890 | None:intergenic |
| AGAACTAGCAGCAACACTTC+GGG | 0.471564 | 3_4:+60802841 | None:intergenic |
| ATGGGTATAACTGGTGTAGA+GGG | 0.473068 | 3_4:-60801655 | Msa0511300:CDS |
| ACAACTACGATCAATTGAAA+TGG | 0.476008 | 3_4:+60806934 | None:intergenic |
| TCCATGATCCTCTTTATAAG+TGG | 0.477519 | 3_4:-60801462 | Msa0511300:CDS |
| TTTACGTGTAAAGCAAAAGC+TGG | 0.481676 | 3_4:-60801150 | Msa0511300:CDS |
| GGAGAAGAAGGCTTGGTGTT+CGG | 0.483382 | 3_4:-60805834 | Msa0511300:CDS |
| ATTGTGTTCGGAATTTATGT+TGG | 0.490613 | 3_4:-60803921 | Msa0511300:CDS |
| AAGAGACGTAATTGATGGAA+TGG | 0.490641 | 3_4:-60801674 | Msa0511300:CDS |
| TCTAGAAATCACATTGTGTT+CGG | 0.498201 | 3_4:-60803933 | Msa0511300:CDS |
| CACCTTGAGTGATCTTGTAT+AGG | 0.500853 | 3_4:-60800331 | Msa0511300:three_prime_UTR |
| ATCAAGATACATGGAGAAGA+AGG | 0.502088 | 3_4:-60805846 | Msa0511300:CDS |
| ATCAATAAAACACCTGTCCA+TGG | 0.508766 | 3_4:+60801096 | None:intergenic |
| CGTGTAAAGCAAAAGCTGGA+TGG | 0.510359 | 3_4:-60801146 | Msa0511300:CDS |
| GATGCTTAAGACCCCAGAAC+GGG | 0.511848 | 3_4:-60802213 | Msa0511300:intron |
| GGCACGTTTCCTTACTTCAA+AGG | 0.515666 | 3_4:-60806899 | Msa0511300:CDS |
| GATCAGAATCGATTGCATCT+TGG | 0.516227 | 3_4:+60800414 | None:intergenic |
| AATGAGTTGTCATCTTATCA+TGG | 0.516662 | 3_4:-60808306 | Msa0511300:CDS |
| CATTCAAGAACACCAGCACT+TGG | 0.516687 | 3_4:+60805040 | None:intergenic |
| TGATTTGGATACAGGTTTGG+AGG | 0.520624 | 3_4:-60801219 | Msa0511300:CDS |
| CCCACTTATAAAGAGGATCA+TGG | 0.526086 | 3_4:+60801461 | None:intergenic |
| TAGAACTAGCAGCAACACTT+CGG | 0.541841 | 3_4:+60802840 | None:intergenic |
| GGTGAAATGCGAAGTATCCA+TGG | 0.543569 | 3_4:-60801113 | Msa0511300:CDS |
| AGAGACGTAATTGATGGAAT+GGG | 0.547862 | 3_4:-60801673 | Msa0511300:CDS |
| TCTTGTCAAACCACTCAGCT+GGG | 0.551525 | 3_4:+60802876 | None:intergenic |
| TGGAAATGATGACCTAAGAC+AGG | 0.554157 | 3_4:-60806684 | Msa0511300:CDS |
| TAGTAGAAGTTCATTTGTCG+TGG | 0.558915 | 3_4:-60808364 | Msa0511300:CDS |
| GAAATGGTAGCTGTCACTAC+AGG | 0.560747 | 3_4:+60806950 | None:intergenic |
| TGTGCCAAATGTTTCCTGGT+TGG | 0.561774 | 3_4:-60800388 | Msa0511300:CDS |
| GATAGAGCCCACTTATAAAG+AGG | 0.563870 | 3_4:+60801454 | None:intergenic |
| TGACGCTGCAAAGCTTTCAG+AGG | 0.566199 | 3_4:+60801430 | None:intergenic |
| GTGTAAAGCAAAAGCTGGAT+GGG | 0.568813 | 3_4:-60801145 | Msa0511300:CDS |
| TGACTTACAAGTTCTAGCAC+CGG | 0.570001 | 3_4:+60807950 | None:intergenic |
| TTAACATACAGGATAATGAA+TGG | 0.570318 | 3_4:-60806776 | Msa0511300:intron |
| GCTTGGTGTTCGGACGTACA+AGG | 0.571194 | 3_4:-60805824 | Msa0511300:intron |
| CATAACCAAGCTCCCCAACC+AGG | 0.573245 | 3_4:+60800374 | None:intergenic |
| TAGGCGGCTTATATTCATGT+TGG | 0.573394 | 3_4:-60800312 | Msa0511300:three_prime_UTR |
| CCATGATCCTCTTTATAAGT+GGG | 0.573492 | 3_4:-60801461 | Msa0511300:CDS |
| AATGCGAAGTATCCATGGAC+AGG | 0.578933 | 3_4:-60801108 | Msa0511300:intron |
| CGCCTATACAAGATCACTCA+AGG | 0.579909 | 3_4:+60800329 | None:intergenic |
| TGAGGAACCATCAAGATACA+TGG | 0.580893 | 3_4:-60805855 | Msa0511300:CDS |
| TGAGATGGAAACAAAGAAAG+AGG | 0.583167 | 3_4:-60808149 | Msa0511300:intron |
| GATACATGGAGAAGAAGGCT+TGG | 0.589762 | 3_4:-60805841 | Msa0511300:CDS |
| AAGGGATTTACGTAATCTCC+CGG | 0.590310 | 3_4:-60807969 | Msa0511300:CDS |
| TGGGTATAACTGGTGTAGAG+GGG | 0.590547 | 3_4:-60801654 | Msa0511300:CDS |
| GAACCTCAAAACGAGTATGA+AGG | 0.591940 | 3_4:-60801197 | Msa0511300:CDS |
| GGGAGATTACGTAAATCCCT+TGG | 0.593582 | 3_4:+60807971 | None:intergenic |
| GTTAATGGCACTCTTCCTCT+CGG | 0.598767 | 3_4:-60805016 | Msa0511300:CDS |
| GGGTATAACTGGTGTAGAGG+GGG | 0.603783 | 3_4:-60801653 | Msa0511300:CDS |
| AGAGGCATTACTGACAATTG+TGG | 0.604005 | 3_4:-60801581 | Msa0511300:CDS |
| AAGCTGGATGGGTATGAAGA+TGG | 0.607491 | 3_4:-60801134 | Msa0511300:CDS |
| ATAAAAGAATGACACTACCA+AGG | 0.608085 | 3_4:-60807988 | Msa0511300:CDS |
| CTTGAGTGATCTTGTATAGG+CGG | 0.610943 | 3_4:-60800328 | Msa0511300:three_prime_UTR |
| GACTTACAAGTTCTAGCACC+GGG | 0.611744 | 3_4:+60807951 | None:intergenic |
| TGGTATAAATGCTCCTAAAG+TGG | 0.614313 | 3_4:-60806756 | Msa0511300:CDS |
| TAAAAGAATGACACTACCAA+GGG | 0.620756 | 3_4:-60807987 | Msa0511300:CDS |
| AATGGGTATAACTGGTGTAG+AGG | 0.621251 | 3_4:-60801656 | Msa0511300:CDS |
| AATTGATCAGACCACTGCAG+AGG | 0.623187 | 3_4:-60802276 | Msa0511300:CDS |
| ACATATGTAGATGAAGCAAA+TGG | 0.624663 | 3_4:-60808194 | Msa0511300:intron |
| TATACGGTCACCATTTGCCA+GGG | 0.625356 | 3_4:+60808401 | None:intergenic |
| TCGTAGTTGTCAATATCATG+AGG | 0.637179 | 3_4:-60806921 | Msa0511300:CDS |
| TGATGCTTAAGACCCCAGAA+CGG | 0.644615 | 3_4:-60802214 | Msa0511300:CDS |
| CGTAGTTGTCAATATCATGA+GGG | 0.647297 | 3_4:-60806920 | Msa0511300:CDS |
| AATGTGAACAACCTCTGCAG+TGG | 0.647590 | 3_4:+60802265 | None:intergenic |
| GGTTTCTACACCCAGCTGAG+TGG | 0.651446 | 3_4:-60802886 | Msa0511300:CDS |
| TATGTAGATGAAGCAAATGG+TGG | 0.657308 | 3_4:-60808191 | Msa0511300:intron |
| TCAAAGACATACCCGTTCTG+GGG | 0.666275 | 3_4:+60802202 | None:intergenic |
| AGAAAACTCTCTCTGTTATG+CGG | 0.668713 | 3_4:-60801612 | Msa0511300:CDS |
| TGTTATGCGGACAAACAAAG+AGG | 0.669226 | 3_4:-60801599 | Msa0511300:CDS |
| TCATTGAATGTCGATCTCCA+AGG | 0.669618 | 3_4:+60802306 | None:intergenic |
| GTTTAGTTAACACATTCCTG+AGG | 0.679281 | 3_4:-60805873 | Msa0511300:CDS |
| CCTAAAAGATATTCACCGAG+AGG | 0.683152 | 3_4:+60805001 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTCAAAAAATGAATAAAA+TGG | + | chr3_4:60800790-60800809 | None:intergenic | 10.0% |
| !!! | TACTTTTAAATTTTGAAATT+TGG | - | chr3_4:60801356-60801375 | Msa0511300:intron | 10.0% |
| !!! | ATTTTTAAGATGTTTAATTT+TGG | + | chr3_4:60801434-60801453 | None:intergenic | 10.0% |
| !!! | AGTAATTTCTTTTTTAAAAA+TGG | + | chr3_4:60802121-60802140 | None:intergenic | 10.0% |
| !!! | AATAAATTTTGTAGTAAAAT+AGG | + | chr3_4:60803746-60803765 | None:intergenic | 10.0% |
| !! | TTTATATATTTATTATCACT+AGG | - | chr3_4:60804388-60804407 | Msa0511300:intron | 10.0% |
| !!! | TGTTTTATTTACAATTATTT+AGG | - | chr3_4:60804695-60804714 | Msa0511300:intron | 10.0% |
| !! | GAAAATAAAAAGAAATTAAT+AGG | + | chr3_4:60807189-60807208 | None:intergenic | 10.0% |
| !!! | TCATAGTTAATTTATTTTAT+TGG | + | chr3_4:60807888-60807907 | None:intergenic | 10.0% |
| !! | TTTATCTTCAAATAAATTCA+TGG | + | chr3_4:60800615-60800634 | None:intergenic | 15.0% |
| !! | AAAATACAATGAATACTAAA+TGG | - | chr3_4:60801500-60801519 | Msa0511300:intron | 15.0% |
| !! | TAATATGTAATAAATTCTGA+AGG | - | chr3_4:60801596-60801615 | Msa0511300:CDS | 15.0% |
| !!! | CATTTTATGATTTTCTTTTT+AGG | - | chr3_4:60804260-60804279 | Msa0511300:intron | 15.0% |
| !! | AAAATTAAAAAAAAGGAAAC+AGG | + | chr3_4:60804925-60804944 | None:intergenic | 15.0% |
| !! | TGATAAAATAAGAAATTACA+GGG | + | chr3_4:60804985-60805004 | None:intergenic | 15.0% |
| !! | TTGATAAAATAAGAAATTAC+AGG | + | chr3_4:60804986-60805005 | None:intergenic | 15.0% |
| !! | TATAATTTCATTAATCTATG+AGG | - | chr3_4:60805268-60805287 | Msa0511300:intron | 15.0% |
| !!! | TAATAATGAATTTTACATGA+GGG | + | chr3_4:60805389-60805408 | None:intergenic | 15.0% |
| !!! | TTAATAATGAATTTTACATG+AGG | + | chr3_4:60805390-60805409 | None:intergenic | 15.0% |
| !! | TAATTTCAAATTTGCAAATT+AGG | - | chr3_4:60806715-60806734 | Msa0511300:CDS | 15.0% |
| !! | GTATATATTATATTCAAGTA+CGG | - | chr3_4:60807791-60807810 | Msa0511300:intron | 15.0% |
| !!! | ATTTTTAAAGATGAACTCTT+TGG | - | chr3_4:60800873-60800892 | Msa0511300:intron | 20.0% |
| !!! | TTTTTTCTTATATTTGAGTC+CGG | - | chr3_4:60801201-60801220 | Msa0511300:CDS | 20.0% |
| !! | ACAAATAATGCTCAAATAAA+AGG | + | chr3_4:60801624-60801643 | None:intergenic | 20.0% |
| !! | ATTTGTATATTGTTAGTGTT+AGG | - | chr3_4:60801638-60801657 | Msa0511300:CDS | 20.0% |
| !! | CTTACAATTTATAGAAAAGT+AGG | + | chr3_4:60802181-60802200 | None:intergenic | 20.0% |
| !! | AGAAACATTAACAACAAAAT+AGG | + | chr3_4:60802529-60802548 | None:intergenic | 20.0% |
| !!! | TGCTGTTTTTTATCTTTTAA+TGG | - | chr3_4:60802583-60802602 | Msa0511300:intron | 20.0% |
| !!! | GCTGTTTTTTATCTTTTAAT+GGG | - | chr3_4:60802584-60802603 | Msa0511300:intron | 20.0% |
| !!! | TTTATCTTTTAATGGGTTTT+TGG | - | chr3_4:60802591-60802610 | Msa0511300:intron | 20.0% |
| !!! | TAATTCTGTTTTCCAATATT+TGG | - | chr3_4:60802672-60802691 | Msa0511300:intron | 20.0% |
| !! | TAGCTTATCAAAAAACAATT+TGG | - | chr3_4:60802737-60802756 | Msa0511300:intron | 20.0% |
| !!! | CTTTCATTTTTGCTTATATA+AGG | + | chr3_4:60803023-60803042 | None:intergenic | 20.0% |
| !! | TATATAAGCAAAAATGAAAG+CGG | - | chr3_4:60803023-60803042 | Msa0511300:intron | 20.0% |
| !! | CCATATGTAATGAAAAATAA+AGG | + | chr3_4:60803066-60803085 | None:intergenic | 20.0% |
| !!! | CCTTTATTTTTCATTACATA+TGG | - | chr3_4:60803063-60803082 | Msa0511300:intron | 20.0% |
| !! | TCACAATACATAATATGTTA+AGG | - | chr3_4:60803211-60803230 | Msa0511300:intron | 20.0% |
| !! | CACAATACATAATATGTTAA+GGG | - | chr3_4:60803212-60803231 | Msa0511300:intron | 20.0% |
| !! | ATAAAATTTAACTCCATAAC+AGG | - | chr3_4:60803305-60803324 | Msa0511300:intron | 20.0% |
| !! | TAAAATTTAACTCCATAACA+GGG | - | chr3_4:60803306-60803325 | Msa0511300:intron | 20.0% |
| !!! | AGAATAGCTTTTTATGATAT+AGG | - | chr3_4:60803625-60803644 | Msa0511300:intron | 20.0% |
| !!! | ATGTTTTTAGTTTGAAGTTT+TGG | - | chr3_4:60804220-60804239 | Msa0511300:intron | 20.0% |
| !! | AGTTCATTTCTTGTAATTAT+AGG | - | chr3_4:60804413-60804432 | Msa0511300:intron | 20.0% |
| !!! | GTTCTAGTTTATATGAAATT+TGG | - | chr3_4:60804602-60804621 | Msa0511300:intron | 20.0% |
| !! | ATATGAAATTTGGATAATCT+TGG | - | chr3_4:60804612-60804631 | Msa0511300:intron | 20.0% |
| !! | TTTCTTTCTTATATATGAAG+TGG | + | chr3_4:60804669-60804688 | None:intergenic | 20.0% |
| !!! | TTACAATTATTTAGGTTGTT+AGG | - | chr3_4:60804703-60804722 | Msa0511300:intron | 20.0% |
| !!! | TTTTCTTTCTGTTTTCAATA+TGG | - | chr3_4:60804946-60804965 | Msa0511300:intron | 20.0% |
| !! | TTTCAAAACAAAATCTTTAC+AGG | - | chr3_4:60805090-60805109 | Msa0511300:intron | 20.0% |
| !! | AGATGTTTGCTTAAAAAATT+GGG | + | chr3_4:60806059-60806078 | None:intergenic | 20.0% |
| !! | TAGATGTTTGCTTAAAAAAT+TGG | + | chr3_4:60806060-60806079 | None:intergenic | 20.0% |
| !! | AAAGAAAATAGAACTAATGT+AGG | + | chr3_4:60806176-60806195 | None:intergenic | 20.0% |
| !!! | AATAATGAAACTAACTTTTG+AGG | + | chr3_4:60807313-60807332 | None:intergenic | 20.0% |
| !! | AAAAGAAGAAAAAGATCAAT+GGG | + | chr3_4:60807444-60807463 | None:intergenic | 20.0% |
| !!! | TCATTCAATTTAGAATAACT+GGG | + | chr3_4:60807744-60807763 | None:intergenic | 20.0% |
| !!! | TTCATTCAATTTAGAATAAC+TGG | + | chr3_4:60807745-60807764 | None:intergenic | 20.0% |
| !! | ATTCTAAATTGAATGAAAGT+TGG | - | chr3_4:60807748-60807767 | Msa0511300:intron | 20.0% |
| !!! | TCTCTTTTAGAAATTACTAT+TGG | + | chr3_4:60808023-60808042 | None:intergenic | 20.0% |
| !! | GGATGGTAATTATAAATTTA+TGG | + | chr3_4:60808122-60808141 | None:intergenic | 20.0% |
| !!! | AAATATAATTTTACATGCCA+TGG | - | chr3_4:60808174-60808193 | Msa0511300:CDS | 20.0% |
| !!! | AATATAATTTTACATGCCAT+GGG | - | chr3_4:60808175-60808194 | Msa0511300:CDS | 20.0% |
| ! | CATGTCAGAAATATAATGAA+TGG | - | chr3_4:60801455-60801474 | Msa0511300:CDS | 25.0% |
| !! | TTTTCCTTTTGCATTTCTTT+TGG | - | chr3_4:60801718-60801737 | Msa0511300:intron | 25.0% |
| ! | TTAACATACAGGATAATGAA+TGG | - | chr3_4:60801926-60801945 | Msa0511300:intron | 25.0% |
| !! | CTTATGCTTTCTAATTGTTT+TGG | - | chr3_4:60802062-60802081 | Msa0511300:intron | 25.0% |
| !!! | AGGTATCATTTTTCTAAAAC+AGG | + | chr3_4:60802224-60802243 | None:intergenic | 25.0% |
| ! | CTATACTGAAAGATTTAACT+TGG | + | chr3_4:60802277-60802296 | None:intergenic | 25.0% |
| ! | TGAAATCATAACATGATTAC+TGG | - | chr3_4:60802389-60802408 | Msa0511300:intron | 25.0% |
| ! | AATGTTAAGCGAAAATTGAT+TGG | - | chr3_4:60802415-60802434 | Msa0511300:intron | 25.0% |
| ! | ATGTTAAGCGAAAATTGATT+GGG | - | chr3_4:60802416-60802435 | Msa0511300:intron | 25.0% |
| !! | TTGTGTTCTTTTCTTTTTTC+TGG | - | chr3_4:60802614-60802633 | Msa0511300:intron | 25.0% |
| !! | AAACTGTTAGGAAACATTTT+AGG | - | chr3_4:60802977-60802996 | Msa0511300:intron | 25.0% |
| !! | AACTGTTAGGAAACATTTTA+GGG | - | chr3_4:60802978-60802997 | Msa0511300:intron | 25.0% |
| ! | ATATAAGCAAAAATGAAAGC+GGG | - | chr3_4:60803024-60803043 | Msa0511300:intron | 25.0% |
| ! | TTATAAGATGAAGAAACCTT+GGG | + | chr3_4:60803142-60803161 | None:intergenic | 25.0% |
| ! | CATTACATATAAGATGTCTA+GGG | + | chr3_4:60803483-60803502 | None:intergenic | 25.0% |
| ! | ACATTACATATAAGATGTCT+AGG | + | chr3_4:60803484-60803503 | None:intergenic | 25.0% |
| !! | CTAATCCTAAATATTTTCCA+TGG | - | chr3_4:60803511-60803530 | Msa0511300:intron | 25.0% |
| ! | TATTCAACTTCAAAAAGGAT+TGG | - | chr3_4:60803770-60803789 | Msa0511300:intron | 25.0% |
| ! | ATGTCAAATTCTATAACTCA+TGG | - | chr3_4:60803840-60803859 | Msa0511300:intron | 25.0% |
| ! | CAAGGAAAATTGTTAGATAT+AGG | + | chr3_4:60803945-60803964 | None:intergenic | 25.0% |
| !! | TCTTACGTATATTGATTGTT+TGG | - | chr3_4:60804110-60804129 | Msa0511300:intron | 25.0% |
| ! | ATTAATATTGCAGAGTTCAT+AGG | + | chr3_4:60804181-60804200 | None:intergenic | 25.0% |
| ! | CAAACTAAAAACATACATCT+TGG | + | chr3_4:60804214-60804233 | None:intergenic | 25.0% |
| !! | AAAACTACTTTGGAAAAACA+TGG | + | chr3_4:60804310-60804329 | None:intergenic | 25.0% |
| ! | AATTTATCTCTAACAAGGTT+AGG | + | chr3_4:60804875-60804894 | None:intergenic | 25.0% |
| ! | TCATGAATTTATCTCTAACA+AGG | + | chr3_4:60804880-60804899 | None:intergenic | 25.0% |
| ! | TAAAAAAAAGGAAACAGGTT+AGG | + | chr3_4:60804920-60804939 | None:intergenic | 25.0% |
| ! | ATAAGAAATTACAGGGAAAA+TGG | + | chr3_4:60804978-60804997 | None:intergenic | 25.0% |
| ! | TTTGAAAAAGACATCTAGTT+GGG | + | chr3_4:60805077-60805096 | None:intergenic | 25.0% |
| !!! | TTTTGAAAAAGACATCTAGT+TGG | + | chr3_4:60805078-60805097 | None:intergenic | 25.0% |
| ! | CACTGTATTACTATTCTATT+TGG | + | chr3_4:60805534-60805553 | None:intergenic | 25.0% |
| !! | ATACAGTGATGATTTTTGAT+AGG | - | chr3_4:60805546-60805565 | Msa0511300:intron | 25.0% |
| !! | TGATGATTTTTGATAGGAAA+GGG | - | chr3_4:60805552-60805571 | Msa0511300:intron | 25.0% |
| ! | TAATTGTAATAACTCTTCAC+AGG | + | chr3_4:60805626-60805645 | None:intergenic | 25.0% |
| ! | AGTTATTACAATTAGTCGTT+AGG | - | chr3_4:60805632-60805651 | Msa0511300:intron | 25.0% |
| !! | AGGATTTAGTATTGAGTATA+TGG | - | chr3_4:60805652-60805671 | Msa0511300:intron | 25.0% |
| !! | GGATTTAGTATTGAGTATAT+GGG | - | chr3_4:60805653-60805672 | Msa0511300:intron | 25.0% |
| !!! | CATGCTTATTTTTTCAGTAT+TGG | - | chr3_4:60805911-60805930 | Msa0511300:intron | 25.0% |
| ! | ATCAACGAATAAATATACCA+AGG | + | chr3_4:60806349-60806368 | None:intergenic | 25.0% |
| !! | TTATTCGTTGATTGATATTC+AGG | - | chr3_4:60806357-60806376 | Msa0511300:intron | 25.0% |
| ! | ATAGAATCAAAACATAGACT+AGG | - | chr3_4:60806584-60806603 | Msa0511300:intron | 25.0% |
| ! | TGGTGAATTATATTCTTTGT+TGG | + | chr3_4:60806615-60806634 | None:intergenic | 25.0% |
| !! | TTCACTAGTTTCATTAACAT+TGG | + | chr3_4:60806759-60806778 | None:intergenic | 25.0% |
| !!! | AACATATTTGGGAGTATTTA+GGG | + | chr3_4:60806844-60806863 | None:intergenic | 25.0% |
| !!! | AAACATATTTGGGAGTATTT+AGG | + | chr3_4:60806845-60806864 | None:intergenic | 25.0% |
| ! | AGATATCAACAATGTAAATG+AGG | + | chr3_4:60806974-60806993 | None:intergenic | 25.0% |
| !! | AATCAAAATGTGTCTTTTGT+AGG | - | chr3_4:60807211-60807230 | Msa0511300:intron | 25.0% |
| !!! | AAGGATTCTTTTTGTTTCAA+AGG | + | chr3_4:60807339-60807358 | None:intergenic | 25.0% |
| ! | AAAGAAGAAAAAGATCAATG+GGG | + | chr3_4:60807443-60807462 | None:intergenic | 25.0% |
| ! | GAAAAGAAGAAAAAGATCAA+TGG | + | chr3_4:60807445-60807464 | None:intergenic | 25.0% |
| ! | GCATAATCAATACACTAATT+TGG | + | chr3_4:60807642-60807661 | None:intergenic | 25.0% |
| !! | GTTTCTTCTATATTGTTGTT+TGG | - | chr3_4:60807664-60807683 | Msa0511300:intron | 25.0% |
| !!! | CTTTTGAGTACTTGTATATA+TGG | - | chr3_4:60807987-60808006 | Msa0511300:CDS | 25.0% |
| ! | AAATTACTATTGGACAAATG+TGG | + | chr3_4:60808013-60808032 | None:intergenic | 25.0% |
| !! | ATATAATTTTACATGCCATG+GGG | - | chr3_4:60808176-60808195 | Msa0511300:CDS | 25.0% |
| ! | TTACATGTTCAAATATCTCA+TGG | - | chr3_4:60808221-60808240 | Msa0511300:intron | 25.0% |
| ! | TACATGTTCAAATATCTCAT+GGG | - | chr3_4:60808222-60808241 | Msa0511300:intron | 25.0% |
| TACGCTGTTTATCCTTTATA+CGG | + | chr3_4:60800320-60800339 | None:intergenic | 30.0% | |
| AAGATGACAACTCATTTAGA+AGG | + | chr3_4:60800392-60800411 | None:intergenic | 30.0% | |
| AATGAGTTGTCATCTTATCA+TGG | - | chr3_4:60800396-60800415 | Msa0511300:CDS | 30.0% | |
| CATATGTAACATTCAGAGTT+TGG | + | chr3_4:60800495-60800514 | None:intergenic | 30.0% | |
| ACATATGTAGATGAAGCAAA+TGG | - | chr3_4:60800508-60800527 | Msa0511300:intron | 30.0% | |
| !! | TTATATCAAACTTGCTGAGA+TGG | - | chr3_4:60800538-60800557 | Msa0511300:intron | 30.0% |
| TAAATTCATGGACACAAGAA+TGG | + | chr3_4:60800603-60800622 | None:intergenic | 30.0% | |
| ACATAAAGAACTCAGTTAGA+AGG | + | chr3_4:60800685-60800704 | None:intergenic | 30.0% | |
| TCTAACTGAGTTCTTTATGT+AGG | - | chr3_4:60800685-60800704 | Msa0511300:intron | 30.0% | |
| ATAAAAGAATGACACTACCA+AGG | - | chr3_4:60800714-60800733 | Msa0511300:intron | 30.0% | |
| TAAAAGAATGACACTACCAA+GGG | - | chr3_4:60800715-60800734 | Msa0511300:intron | 30.0% | |
| TCAAACAAAGTTGACGTATA+TGG | - | chr3_4:60801141-60801160 | Msa0511300:CDS | 30.0% | |
| TCTGATATAGCATAATACTC+CGG | + | chr3_4:60801223-60801242 | None:intergenic | 30.0% | |
| GCTATATCAGAAATGAGTTA+TGG | - | chr3_4:60801232-60801251 | Msa0511300:CDS | 30.0% | |
| ATCAGAAATGAGTTATGGAA+TGG | - | chr3_4:60801237-60801256 | Msa0511300:intron | 30.0% | |
| ! | ATGAAGTGCAACAAAGTTTT+GGG | - | chr3_4:60801277-60801296 | Msa0511300:intron | 30.0% |
| !!! | TTTTTTCCAGCAAGTTTTGA+AGG | + | chr3_4:60801336-60801355 | None:intergenic | 30.0% |
| TTGTCACATGTTTATATCCT+TGG | + | chr3_4:60801568-60801587 | None:intergenic | 30.0% | |
| ATAAACATGTGACAAGTGAA+TGG | - | chr3_4:60801573-60801592 | Msa0511300:intron | 30.0% | |
| TAAGAAGATTAAGCACACAT+AGG | + | chr3_4:60801673-60801692 | None:intergenic | 30.0% | |
| ACAACTACGATCAATTGAAA+TGG | + | chr3_4:60801771-60801790 | None:intergenic | 30.0% | |
| AGATTCTGTTATGTAAGTCT+TGG | - | chr3_4:60801832-60801851 | Msa0511300:intron | 30.0% | |
| TTGGTCGTTTATTGAATTCA+GGG | - | chr3_4:60801851-60801870 | Msa0511300:intron | 30.0% | |
| TTCTTAAATCTGCTGTATGT+TGG | - | chr3_4:60801902-60801921 | Msa0511300:intron | 30.0% | |
| !! | TGTATGTTGGTTTAACATAC+AGG | - | chr3_4:60801915-60801934 | Msa0511300:intron | 30.0% |
| TAATAAACGAAGATGATACC+AGG | + | chr3_4:60802450-60802469 | None:intergenic | 30.0% | |
| ATCTTCGTTTATTAACCCAT+AGG | - | chr3_4:60802456-60802475 | Msa0511300:intron | 30.0% | |
| !!! | TTTTTTCTGGTCGAAATTTC+AGG | - | chr3_4:60802627-60802646 | Msa0511300:intron | 30.0% |
| TAACCTTCTGAATGCTTTAT+AGG | - | chr3_4:60802788-60802807 | Msa0511300:intron | 30.0% | |
| ! | TTACCTATAAAGCATTCAGA+AGG | + | chr3_4:60802794-60802813 | None:intergenic | 30.0% |
| TCTGAATGCTTTATAGGTAA+TGG | - | chr3_4:60802794-60802813 | Msa0511300:intron | 30.0% | |
| !! | TAGGTAATGGAACAATTCTT+TGG | - | chr3_4:60802807-60802826 | Msa0511300:intron | 30.0% |
| !!! | CTTCTGCTTTTTATTGTTCT+TGG | - | chr3_4:60802904-60802923 | Msa0511300:CDS | 30.0% |
| GTTATAAGATGAAGAAACCT+TGG | + | chr3_4:60803143-60803162 | None:intergenic | 30.0% | |
| !!! | ATTTTTCTAGTTCAAGGAGA+GGG | + | chr3_4:60803165-60803184 | None:intergenic | 30.0% |
| !!! | AATTTTTCTAGTTCAAGGAG+AGG | + | chr3_4:60803166-60803185 | None:intergenic | 30.0% |
| !!! | GAAGCAATTTTTCTAGTTCA+AGG | + | chr3_4:60803171-60803190 | None:intergenic | 30.0% |
| !! | TGCTTACTTCATCATTTTTC+AGG | + | chr3_4:60803248-60803267 | None:intergenic | 30.0% |
| !!! | AGAACAATTTTTTCCTTTGC+TGG | - | chr3_4:60803270-60803289 | Msa0511300:intron | 30.0% |
| TCATCGTGAACAATAATACA+TGG | - | chr3_4:60803436-60803455 | Msa0511300:intron | 30.0% | |
| TTCGTCCATGGAAAATATTT+AGG | + | chr3_4:60803519-60803538 | None:intergenic | 30.0% | |
| TGCGTTATTCAACTTCAAAA+AGG | - | chr3_4:60803765-60803784 | Msa0511300:intron | 30.0% | |
| GCATTCATTCTTAAAAGCTT+TGG | + | chr3_4:60803816-60803835 | None:intergenic | 30.0% | |
| GTTGAATCAAAACACACATA+TGG | - | chr3_4:60803918-60803937 | Msa0511300:CDS | 30.0% | |
| TTACATTTGACATGTGCATT+CGG | + | chr3_4:60804036-60804055 | None:intergenic | 30.0% | |
| ! | ACGTATATTGATTGTTTGGT+AGG | - | chr3_4:60804114-60804133 | Msa0511300:intron | 30.0% |
| !!! | AAAGTAGTTTTGAGCTGTAT+CGG | - | chr3_4:60804319-60804338 | Msa0511300:intron | 30.0% |
| AAAAAACACATGCACTTGAA+TGG | + | chr3_4:60804533-60804552 | None:intergenic | 30.0% | |
| TCTAGAAATCACATTGTGTT+CGG | - | chr3_4:60804769-60804788 | Msa0511300:intron | 30.0% | |
| ATTGTGTTCGGAATTTATGT+TGG | - | chr3_4:60804781-60804800 | Msa0511300:intron | 30.0% | |
| TGGAAATCCATTTGTATGTT+TGG | - | chr3_4:60804801-60804820 | Msa0511300:intron | 30.0% | |
| AAACAAAATCTTTACAGGTG+AGG | - | chr3_4:60805095-60805114 | Msa0511300:intron | 30.0% | |
| TTTCCACACGAGTTTATTAA+CGG | + | chr3_4:60805209-60805228 | None:intergenic | 30.0% | |
| GTCTATAAGAACAGTAACAA+TGG | + | chr3_4:60805314-60805333 | None:intergenic | 30.0% | |
| AATGTACCTTAGAAAGAGAA+TGG | - | chr3_4:60805450-60805469 | Msa0511300:intron | 30.0% | |
| ! | TGTTTTCCATTCTCTTTCTA+AGG | + | chr3_4:60805459-60805478 | None:intergenic | 30.0% |
| ! | GTGATGATTTTTGATAGGAA+AGG | - | chr3_4:60805551-60805570 | Msa0511300:intron | 30.0% |
| TTAAAAGAGAGTGAATAGAG+AGG | + | chr3_4:60805717-60805736 | None:intergenic | 30.0% | |
| ! | CTCTATTCACTCTCTTTTAA+AGG | - | chr3_4:60805717-60805736 | Msa0511300:intron | 30.0% |
| ! | TTGATCATATTGTCTTTTGC+AGG | - | chr3_4:60805765-60805784 | Msa0511300:intron | 30.0% |
| AAGAAAAAGAAATGCATGAC+AGG | + | chr3_4:60805791-60805810 | None:intergenic | 30.0% | |
| ! | TGTCATGCATTTCTTTTTCT+TGG | - | chr3_4:60805790-60805809 | Msa0511300:intron | 30.0% |
| ACTGAAAAAATAAGCATGCA+TGG | + | chr3_4:60805909-60805928 | None:intergenic | 30.0% | |
| ! | TCATGTTAGTGTTGTTGAAT+GGG | + | chr3_4:60805990-60806009 | None:intergenic | 30.0% |
| ! | ATCATGTTAGTGTTGTTGAA+TGG | + | chr3_4:60805991-60806010 | None:intergenic | 30.0% |
| ATGGATTTGGATCACAAAAT+GGG | + | chr3_4:60806148-60806167 | None:intergenic | 30.0% | |
| !! | ATTCAGGTTGGTTATATTGT+TGG | - | chr3_4:60806373-60806392 | Msa0511300:intron | 30.0% |
| GCTTTCTAGATCATTAATGA+AGG | + | chr3_4:60806530-60806549 | None:intergenic | 30.0% | |
| ! | AATTGTTCATTGCTATTCAG+TGG | + | chr3_4:60806655-60806674 | None:intergenic | 30.0% |
| AATGAACAATTGATCGTATG+AGG | - | chr3_4:60806664-60806683 | Msa0511300:intron | 30.0% | |
| TGAAAGAGAAACCCTAAAAT+GGG | - | chr3_4:60806775-60806794 | Msa0511300:intron | 30.0% | |
| AATACTCCCAAATATGTTTG+AGG | - | chr3_4:60806846-60806865 | Msa0511300:intron | 30.0% | |
| TATCAACAATGTAAATGAGG+CGG | + | chr3_4:60806971-60806990 | None:intergenic | 30.0% | |
| ! | ACAAAAAGAATCCTTTTGTC+CGG | - | chr3_4:60807344-60807363 | Msa0511300:intron | 30.0% |
| AAACGAGTATGAAGGAAATA+AGG | - | chr3_4:60807513-60807532 | Msa0511300:intron | 30.0% | |
| TCAATACACTAATTTGGCAA+GGG | + | chr3_4:60807636-60807655 | None:intergenic | 30.0% | |
| ATCAATACACTAATTTGGCA+AGG | + | chr3_4:60807637-60807656 | None:intergenic | 30.0% | |
| !! | TTGTTGTTTGGCTGATAAAA+TGG | - | chr3_4:60807676-60807695 | Msa0511300:intron | 30.0% |
| ! | TGTTGTTTGGCTGATAAAAT+GGG | - | chr3_4:60807677-60807696 | Msa0511300:intron | 30.0% |
| TTGAATGAAAGTTGGAAACT+TGG | - | chr3_4:60807756-60807775 | Msa0511300:intron | 30.0% | |
| ! | TTTTATTGGAATCGATCCAA+TGG | + | chr3_4:60807874-60807893 | None:intergenic | 30.0% |
| ATAATTACCATCCTTAACCA+TGG | - | chr3_4:60808129-60808148 | Msa0511300:intron | 30.0% | |
| TAATTACCATCCTTAACCAT+GGG | - | chr3_4:60808130-60808149 | Msa0511300:intron | 30.0% | |
| TATATTTCATTTATTCGCCC+AGG | + | chr3_4:60808161-60808180 | None:intergenic | 30.0% | |
| ! | TATAATTTTACATGCCATGG+GGG | - | chr3_4:60808177-60808196 | Msa0511300:CDS | 30.0% |
| CTCATGGGAAAATATAATTG+TGG | - | chr3_4:60808237-60808256 | Msa0511300:intron | 30.0% | |
| TAGTAGAAGTTCATTTGTCG+TGG | - | chr3_4:60800338-60800357 | Msa0511300:three_prime_UTR | 35.0% | |
| AAGTTCATTTGTCGTGGATA+TGG | - | chr3_4:60800344-60800363 | Msa0511300:three_prime_UTR | 35.0% | |
| TATGTAGATGAAGCAAATGG+TGG | - | chr3_4:60800511-60800530 | Msa0511300:intron | 35.0% | |
| TGAGATGGAAACAAAGAAAG+AGG | - | chr3_4:60800553-60800572 | Msa0511300:intron | 35.0% | |
| TGAATACATAGTAGTCCTTC+CGG | - | chr3_4:60801092-60801111 | Msa0511300:intron | 35.0% | |
| !! | TTGTTGCTTATTTTCGAGAC+CGG | + | chr3_4:60801114-60801133 | None:intergenic | 35.0% |
| ! | CATGAAGTGCAACAAAGTTT+TGG | - | chr3_4:60801276-60801295 | Msa0511300:intron | 35.0% |
| ATGGCCAAAAGAAATGCAAA+AGG | + | chr3_4:60801725-60801744 | None:intergenic | 35.0% | |
| TCGTAGTTGTCAATATCATG+AGG | - | chr3_4:60801781-60801800 | Msa0511300:intron | 35.0% | |
| CGTAGTTGTCAATATCATGA+GGG | - | chr3_4:60801782-60801801 | Msa0511300:intron | 35.0% | |
| !! | TCTGCTAATCCTTTGAAGTA+AGG | + | chr3_4:60801815-60801834 | None:intergenic | 35.0% |
| CTTGGTCGTTTATTGAATTC+AGG | - | chr3_4:60801850-60801869 | Msa0511300:intron | 35.0% | |
| TGGTCGTTTATTGAATTCAG+GGG | - | chr3_4:60801852-60801871 | Msa0511300:intron | 35.0% | |
| TGGTATAAATGCTCCTAAAG+TGG | - | chr3_4:60801946-60801965 | Msa0511300:intron | 35.0% | |
| ! | TCTGCTATAAAAGCTTGCTT+CGG | + | chr3_4:60802145-60802164 | None:intergenic | 35.0% |
| GAAAAATGATACCTTCCATC+TGG | - | chr3_4:60802230-60802249 | Msa0511300:CDS | 35.0% | |
| AAGCACAGTGAACATCTAAA+AGG | + | chr3_4:60802333-60802352 | None:intergenic | 35.0% | |
| !!! | CGTTAACTTGTACAGTTTTC+TGG | + | chr3_4:60802364-60802383 | None:intergenic | 35.0% |
| ATTGATTGGGTTTACTTACC+TGG | - | chr3_4:60802429-60802448 | Msa0511300:intron | 35.0% | |
| TTATTAACCCATAGGATGCT+TGG | - | chr3_4:60802464-60802483 | Msa0511300:intron | 35.0% | |
| !! | TGCTGATTTGTATAGCATGT+AGG | - | chr3_4:60802491-60802510 | Msa0511300:intron | 35.0% |
| ATCAAAAAACAATTTGGCCC+TGG | - | chr3_4:60802743-60802762 | Msa0511300:intron | 35.0% | |
| CAAAGCAAACAACAAATCCA+GGG | + | chr3_4:60802763-60802782 | None:intergenic | 35.0% | |
| TCAAAGCAAACAACAAATCC+AGG | + | chr3_4:60802764-60802783 | None:intergenic | 35.0% | |
| !! | GGATTTGTTGTTTGCTTTGA+TGG | - | chr3_4:60802764-60802783 | Msa0511300:intron | 35.0% |
| GTTTAGTTAACACATTCCTG+AGG | - | chr3_4:60802829-60802848 | Msa0511300:intron | 35.0% | |
| TTCTTCTCCATGTATCTTGA+TGG | + | chr3_4:60802857-60802876 | None:intergenic | 35.0% | |
| ATCAAGATACATGGAGAAGA+AGG | - | chr3_4:60802856-60802875 | Msa0511300:CDS | 35.0% | |
| CCTAACAGTTTCTTCTTTAC+AGG | + | chr3_4:60802968-60802987 | None:intergenic | 35.0% | |
| CCTGTAAAGAAGAAACTGTT+AGG | - | chr3_4:60802965-60802984 | Msa0511300:intron | 35.0% | |
| ! | GCTGCAAAGGTATATTCTAT+GGG | + | chr3_4:60803108-60803127 | None:intergenic | 35.0% |
| ! | TGCTGCAAAGGTATATTCTA+TGG | + | chr3_4:60803109-60803128 | None:intergenic | 35.0% |
| ATAGAATATACCTTTGCAGC+AGG | - | chr3_4:60803108-60803127 | Msa0511300:intron | 35.0% | |
| TAGAATATACCTTTGCAGCA+GGG | - | chr3_4:60803109-60803128 | Msa0511300:intron | 35.0% | |
| GAAGCTTATCATAGACAACA+AGG | + | chr3_4:60803193-60803212 | None:intergenic | 35.0% | |
| !!! | CAATTTTTTCCTTTGCTGGT+TGG | - | chr3_4:60803274-60803293 | Msa0511300:intron | 35.0% |
| AAGCAAAAGTAGGACAAGAA+AGG | + | chr3_4:60803396-60803415 | None:intergenic | 35.0% | |
| ACAAACCAGAAAGCAAAAGT+AGG | + | chr3_4:60803406-60803425 | None:intergenic | 35.0% | |
| TCGTGAACAATAATACATGG+AGG | - | chr3_4:60803439-60803458 | Msa0511300:intron | 35.0% | |
| ! | CTCTCGGTGAATATCTTTTA+GGG | - | chr3_4:60803702-60803721 | Msa0511300:intron | 35.0% |
| ! | AATTTGGTTCATGCATGAGA+TGG | + | chr3_4:60803883-60803902 | None:intergenic | 35.0% |
| CAACTTAAGCTGTTGGAATT+TGG | + | chr3_4:60803899-60803918 | None:intergenic | 35.0% | |
| GATTCAACAACTTAAGCTGT+TGG | + | chr3_4:60803906-60803925 | None:intergenic | 35.0% | |
| GATACAGCTCAAAACTACTT+TGG | + | chr3_4:60804320-60804339 | None:intergenic | 35.0% | |
| GTATCGGATTCTCATTGTAT+TGG | - | chr3_4:60804335-60804354 | Msa0511300:intron | 35.0% | |
| ATGAGCTCCAAACATACAAA+TGG | + | chr3_4:60804811-60804830 | None:intergenic | 35.0% | |
| ! | TGTTTGGAGCTCATTTACTT+TGG | - | chr3_4:60804817-60804836 | Msa0511300:intron | 35.0% |
| TTCCCCTTCGAAAGTTAATA+AGG | - | chr3_4:60805125-60805144 | Msa0511300:intron | 35.0% | |
| TCCCCTTCGAAAGTTAATAA+GGG | - | chr3_4:60805126-60805145 | Msa0511300:intron | 35.0% | |
| TGCCCTTATTAACTTTCGAA+GGG | + | chr3_4:60805131-60805150 | None:intergenic | 35.0% | |
| TTGCCCTTATTAACTTTCGA+AGG | + | chr3_4:60805132-60805151 | None:intergenic | 35.0% | |
| AAACCGTTAATAAACTCGTG+TGG | - | chr3_4:60805203-60805222 | Msa0511300:intron | 35.0% | |
| AGACACCTTAGTTCCTATAA+CGG | - | chr3_4:60805330-60805349 | Msa0511300:intron | 35.0% | |
| TGGGAAGATTGTAAAACATG+TGG | + | chr3_4:60805686-60805705 | None:intergenic | 35.0% | |
| ! | TGCATTTCTTTTTCTTGGAG+AGG | - | chr3_4:60805795-60805814 | Msa0511300:intron | 35.0% |
| TGACACTTCAATTCGATCAA+GGG | + | chr3_4:60805942-60805961 | None:intergenic | 35.0% | |
| CACAAAATGGGCAATATGAA+GGG | + | chr3_4:60806136-60806155 | None:intergenic | 35.0% | |
| TCACAAAATGGGCAATATGA+AGG | + | chr3_4:60806137-60806156 | None:intergenic | 35.0% | |
| ! | GATGGATTTGGATCACAAAA+TGG | + | chr3_4:60806149-60806168 | None:intergenic | 35.0% |
| !! | AATGTAGGATGTGATGGATT+TGG | + | chr3_4:60806161-60806180 | None:intergenic | 35.0% |
| AGAACTAATGTAGGATGTGA+TGG | + | chr3_4:60806167-60806186 | None:intergenic | 35.0% | |
| GTCAGAAATATCTCATTCTC+AGG | - | chr3_4:60806323-60806342 | Msa0511300:intron | 35.0% | |
| ! | TCGTTGATTGATATTCAGGT+TGG | - | chr3_4:60806361-60806380 | Msa0511300:intron | 35.0% |
| GATCGTATGAGGTTTCTTAT+TGG | - | chr3_4:60806675-60806694 | Msa0511300:intron | 35.0% | |
| ! | GTTTCTTATTGGCTACTGAA+AGG | - | chr3_4:60806686-60806705 | Msa0511300:CDS | 35.0% |
| CTAGTTTCATTAACATTGGC+TGG | + | chr3_4:60806755-60806774 | None:intergenic | 35.0% | |
| GTGAAAGAGAAACCCTAAAA+TGG | - | chr3_4:60806774-60806793 | Msa0511300:intron | 35.0% | |
| CACAAGCCTCAAACATATTT+GGG | + | chr3_4:60806855-60806874 | None:intergenic | 35.0% | |
| TAACATCCTAGTTGTGATAG+AGG | + | chr3_4:60806928-60806947 | None:intergenic | 35.0% | |
| TTGATATCTTCTCTATGTGC+TGG | - | chr3_4:60806985-60807004 | Msa0511300:intron | 35.0% | |
| AAGAGACGTAATTGATGGAA+TGG | - | chr3_4:60807028-60807047 | Msa0511300:intron | 35.0% | |
| AGAGACGTAATTGATGGAAT+GGG | - | chr3_4:60807029-60807048 | Msa0511300:intron | 35.0% | |
| ATTGATGGAATGGGTATAAC+TGG | - | chr3_4:60807038-60807057 | Msa0511300:intron | 35.0% | |
| AGAAAACTCTCTCTGTTATG+CGG | - | chr3_4:60807090-60807109 | Msa0511300:intron | 35.0% | |
| TCCATGATCCTCTTTATAAG+TGG | - | chr3_4:60807240-60807259 | Msa0511300:intron | 35.0% | |
| CCATGATCCTCTTTATAAGT+GGG | - | chr3_4:60807241-60807260 | Msa0511300:intron | 35.0% | |
| CCAAATTCCATAAGATATGC+CGG | + | chr3_4:60807366-60807385 | None:intergenic | 35.0% | |
| GCATATCTTATGGAATTTGG+TGG | - | chr3_4:60807366-60807385 | Msa0511300:intron | 35.0% | |
| ! | CTTTTTCTTCTTTTCTCCAC+AGG | - | chr3_4:60807450-60807469 | Msa0511300:intron | 35.0% |
| ! | TTTCCTTCATACTCGTTTTG+AGG | + | chr3_4:60807511-60807530 | None:intergenic | 35.0% |
| TTTACGTGTAAAGCAAAAGC+TGG | - | chr3_4:60807552-60807571 | Msa0511300:intron | 35.0% | |
| ATCAATAAAACACCTGTCCA+TGG | + | chr3_4:60807609-60807628 | None:intergenic | 35.0% | |
| GCATACTATCTGAATTCTGA+AGG | + | chr3_4:60807707-60807726 | None:intergenic | 35.0% | |
| GTTGGAAACTTGGAAACATA+AGG | - | chr3_4:60807766-60807785 | Msa0511300:intron | 35.0% | |
| TCACTTCTGCACTATAGAAT+TGG | + | chr3_4:60807817-60807836 | None:intergenic | 35.0% | |
| ! | GATGTGACTTTTTGATCCAA+TGG | - | chr3_4:60807906-60807925 | Msa0511300:intron | 35.0% |
| ! | ATAATTTTACATGCCATGGG+GGG | - | chr3_4:60808178-60808197 | Msa0511300:CDS | 35.0% |
| AATTGTGGTATTCCATTTGC+AGG | - | chr3_4:60808252-60808271 | Msa0511300:intron | 35.0% | |
| TCAAGGTGTACAACGAAAAA+AGG | + | chr3_4:60808359-60808378 | None:intergenic | 35.0% | |
| AAGGGATTTACGTAATCTCC+CGG | - | chr3_4:60800733-60800752 | Msa0511300:intron | 40.0% | |
| ! | TGACTTACAAGTTCTAGCAC+CGG | + | chr3_4:60800755-60800774 | None:intergenic | 40.0% |
| GAAATGAGTTATGGAATGGC+AGG | - | chr3_4:60801241-60801260 | Msa0511300:intron | 40.0% | |
| CTGATACCTTCAAAACTTGC+TGG | - | chr3_4:60801327-60801346 | Msa0511300:intron | 40.0% | |
| GCTGTACAACAATAGTGACT+AGG | + | chr3_4:60801546-60801565 | None:intergenic | 40.0% | |
| TCACTATTGTTGTACAGCCA+AGG | - | chr3_4:60801548-60801567 | Msa0511300:intron | 40.0% | |
| ! | TGCATTTCTTTTGGCCATTC+AGG | - | chr3_4:60801727-60801746 | Msa0511300:intron | 40.0% |
| GTTCTGATGGCTGTAGATAT+CGG | - | chr3_4:60801981-60802000 | Msa0511300:intron | 40.0% | |
| TATCGGCAACTTGCAAAATC+TGG | - | chr3_4:60801998-60802017 | Msa0511300:intron | 40.0% | |
| TGGAAATGATGACCTAAGAC+AGG | - | chr3_4:60802018-60802037 | Msa0511300:intron | 40.0% | |
| TTCATACAGCATCCTGTCTT+AGG | + | chr3_4:60802033-60802052 | None:intergenic | 40.0% | |
| ! | CTGCTATAAAAGCTTGCTTC+GGG | + | chr3_4:60802144-60802163 | None:intergenic | 40.0% |
| AAACAGCCATTCAACCAAAG+CGG | + | chr3_4:60802563-60802582 | None:intergenic | 40.0% | |
| !! | TAGCAGAGAGTGCCAAATAT+TGG | + | chr3_4:60802687-60802706 | None:intergenic | 40.0% |
| TGGCACTCTCTGCTAAATAT+TGG | - | chr3_4:60802692-60802711 | Msa0511300:intron | 40.0% | |
| ! | ATGTATCTTGATGGTTCCTC+AGG | + | chr3_4:60802848-60802867 | None:intergenic | 40.0% |
| TGAGGAACCATCAAGATACA+TGG | - | chr3_4:60802847-60802866 | Msa0511300:CDS | 40.0% | |
| TTGTTCTTGGTCTCTAGTGT+TGG | - | chr3_4:60802917-60802936 | Msa0511300:CDS | 40.0% | |
| CAGTTTCTTCTTTACAGGAG+TGG | + | chr3_4:60802963-60802982 | None:intergenic | 40.0% | |
| !! | TATATAAGGCACTGCATAGC+AGG | + | chr3_4:60803009-60803028 | None:intergenic | 40.0% |
| TAAATGCTTCCAACCAGCAA+AGG | + | chr3_4:60803286-60803305 | None:intergenic | 40.0% | |
| CTTCGTGTATAACCCTGTTA+TGG | + | chr3_4:60803321-60803340 | None:intergenic | 40.0% | |
| !! | CTTGTCCTACTTTTGCTTTC+TGG | - | chr3_4:60803398-60803417 | Msa0511300:intron | 40.0% |
| ! | AGCAATGACATTTTCGTCCA+TGG | + | chr3_4:60803531-60803550 | None:intergenic | 40.0% |
| !! | AAGTGCTGGTGTTCTTGAAT+GGG | - | chr3_4:60803664-60803683 | Msa0511300:intron | 40.0% |
| !! | GGTGTTCTTGAATGGGTTAA+TGG | - | chr3_4:60803671-60803690 | Msa0511300:intron | 40.0% |
| CCTAAAAGATATTCACCGAG+AGG | + | chr3_4:60803704-60803723 | None:intergenic | 40.0% | |
| ! | CCTCTCGGTGAATATCTTTT+AGG | - | chr3_4:60803701-60803720 | Msa0511300:intron | 40.0% |
| !! | TCGGTGAATATCTTTTAGGG+AGG | - | chr3_4:60803705-60803724 | Msa0511300:intron | 40.0% |
| ! | TTGGCAGTTGATACAAGACA+AGG | + | chr3_4:60803797-60803816 | None:intergenic | 40.0% |
| GGAAACAGGTTAGGTAATGA+GGG | + | chr3_4:60804911-60804930 | None:intergenic | 40.0% | |
| AGGAAACAGGTTAGGTAATG+AGG | + | chr3_4:60804912-60804931 | None:intergenic | 40.0% | |
| GCCCTTATTAACTTTCGAAG+GGG | + | chr3_4:60805130-60805149 | None:intergenic | 40.0% | |
| TGGAAATCTGTGATGATCCA+AGG | - | chr3_4:60805223-60805242 | Msa0511300:intron | 40.0% | |
| GGAAATCTGTGATGATCCAA+GGG | - | chr3_4:60805224-60805243 | Msa0511300:intron | 40.0% | |
| TGATGATCCAAGGGAAACTT+AGG | - | chr3_4:60805233-60805252 | Msa0511300:intron | 40.0% | |
| GATGATCCAAGGGAAACTTA+GGG | - | chr3_4:60805234-60805253 | Msa0511300:intron | 40.0% | |
| GACACCTTAGTTCCTATAAC+GGG | - | chr3_4:60805331-60805350 | Msa0511300:intron | 40.0% | |
| TGATCCCGTTATAGGAACTA+AGG | + | chr3_4:60805338-60805357 | None:intergenic | 40.0% | |
| GACATTAGTGATCCCGTTAT+AGG | + | chr3_4:60805346-60805365 | None:intergenic | 40.0% | |
| ! | ATAACGGGATCACTAATGTC+AGG | - | chr3_4:60805346-60805365 | Msa0511300:intron | 40.0% |
| AAGCATTTCAGGAAGTTTGC+AGG | - | chr3_4:60805584-60805603 | Msa0511300:intron | 40.0% | |
| AGGAAGTTTGCAGGAATTTC+AGG | - | chr3_4:60805593-60805612 | Msa0511300:intron | 40.0% | |
| AGATTGTAAAACATGTGGCC+TGG | + | chr3_4:60805681-60805700 | None:intergenic | 40.0% | |
| GAATAGAGAGGAAGAGACAT+GGG | + | chr3_4:60805705-60805724 | None:intergenic | 40.0% | |
| TGAATAGAGAGGAAGAGACA+TGG | + | chr3_4:60805706-60805725 | None:intergenic | 40.0% | |
| TAGAACTAGCAGCAACACTT+CGG | + | chr3_4:60805865-60805884 | None:intergenic | 40.0% | |
| !! | AAGTGTTGCTGCTAGTTCTA+TGG | - | chr3_4:60805865-60805884 | Msa0511300:CDS | 40.0% |
| AGCATGCATGGAAAAGTAGA+AGG | + | chr3_4:60805897-60805916 | None:intergenic | 40.0% | |
| CTGACACTTCAATTCGATCA+AGG | + | chr3_4:60805943-60805962 | None:intergenic | 40.0% | |
| GCTCTTTGTCCAAGTAAAGA+TGG | - | chr3_4:60805964-60805983 | Msa0511300:intron | 40.0% | |
| TTGAATGGGCCATCTTTACT+TGG | + | chr3_4:60805976-60805995 | None:intergenic | 40.0% | |
| AAAAACTTCAACCAGTGCAC+TGG | + | chr3_4:60806031-60806050 | None:intergenic | 40.0% | |
| ! | TCTAGCCTTCATATTGTAGC+TGG | - | chr3_4:60806076-60806095 | Msa0511300:intron | 40.0% |
| ! | CTAGCCTTCATATTGTAGCT+GGG | - | chr3_4:60806077-60806096 | Msa0511300:intron | 40.0% |
| AATATCTCATTCTCAGGCCT+TGG | - | chr3_4:60806329-60806348 | Msa0511300:intron | 40.0% | |
| ! | GTTGGTTATATTGTTGGCCT+TGG | - | chr3_4:60806379-60806398 | Msa0511300:intron | 40.0% |
| TCATTGAATGTCGATCTCCA+AGG | + | chr3_4:60806399-60806418 | None:intergenic | 40.0% | |
| GAGGTTGTTCACATTGATCT+TGG | - | chr3_4:60806445-60806464 | Msa0511300:intron | 40.0% | |
| !!! | CTTGGTGTTGCTTTTGAACA+AGG | - | chr3_4:60806463-60806482 | Msa0511300:intron | 40.0% |
| ATCAAAGACATACCCGTTCT+GGG | + | chr3_4:60806504-60806523 | None:intergenic | 40.0% | |
| TATCAAAGACATACCCGTTC+TGG | + | chr3_4:60806505-60806524 | None:intergenic | 40.0% | |
| ! | TCATTAACATTGGCTGGAGA+TGG | + | chr3_4:60806749-60806768 | None:intergenic | 40.0% |
| ! | CTGATCAGTGTCCCATTTTA+GGG | + | chr3_4:60806789-60806808 | None:intergenic | 40.0% |
| ! | TCTGATCAGTGTCCCATTTT+AGG | + | chr3_4:60806790-60806809 | None:intergenic | 40.0% |
| GCACAAGCCTCAAACATATT+TGG | + | chr3_4:60806856-60806875 | None:intergenic | 40.0% | |
| CACAAGGTCATCTACAGTAA+TGG | + | chr3_4:60806886-60806905 | None:intergenic | 40.0% | |
| TTGCAACCTCTATCACAACT+AGG | - | chr3_4:60806919-60806938 | Msa0511300:CDS | 40.0% | |
| CTCACAAGAGACGTAATTGA+TGG | - | chr3_4:60807023-60807042 | Msa0511300:intron | 40.0% | |
| AATGGGTATAACTGGTGTAG+AGG | - | chr3_4:60807046-60807065 | Msa0511300:intron | 40.0% | |
| ATGGGTATAACTGGTGTAGA+GGG | - | chr3_4:60807047-60807066 | Msa0511300:intron | 40.0% | |
| TGTTATGCGGACAAACAAAG+AGG | - | chr3_4:60807103-60807122 | Msa0511300:intron | 40.0% | |
| !! | AGAGGCATTACTGACAATTG+TGG | - | chr3_4:60807121-60807140 | Msa0511300:intron | 40.0% |
| CCCACTTATAAAGAGGATCA+TGG | + | chr3_4:60807244-60807263 | None:intergenic | 40.0% | |
| GATAGAGCCCACTTATAAAG+AGG | + | chr3_4:60807251-60807270 | None:intergenic | 40.0% | |
| CATAAGATATGCCGGACAAA+AGG | + | chr3_4:60807358-60807377 | None:intergenic | 40.0% | |
| ! | CTTTTGTCCGGCATATCTTA+TGG | - | chr3_4:60807356-60807375 | Msa0511300:intron | 40.0% |
| CCGGCATATCTTATGGAATT+TGG | - | chr3_4:60807363-60807382 | Msa0511300:intron | 40.0% | |
| ! | TCTTATGGAATTTGGTGGCA+TGG | - | chr3_4:60807371-60807390 | Msa0511300:intron | 40.0% |
| ATGAACAAACTTCGCCGAAT+GGG | + | chr3_4:60807401-60807420 | None:intergenic | 40.0% | |
| ! | CTTCTTTTCTCCACAGGAAA+TGG | - | chr3_4:60807456-60807475 | Msa0511300:intron | 40.0% |
| AAATCAACGTCCATTTCCTG+TGG | + | chr3_4:60807469-60807488 | None:intergenic | 40.0% | |
| ! | ACAGGAAATGGACGTTGATT+TGG | - | chr3_4:60807468-60807487 | Msa0511300:intron | 40.0% |
| !! | ATGGACGTTGATTTGGATAC+AGG | - | chr3_4:60807475-60807494 | Msa0511300:intron | 40.0% |
| !! | CGTTGATTTGGATACAGGTT+TGG | - | chr3_4:60807480-60807499 | Msa0511300:intron | 40.0% |
| ! | TGATTTGGATACAGGTTTGG+AGG | - | chr3_4:60807483-60807502 | Msa0511300:intron | 40.0% |
| GAACCTCAAAACGAGTATGA+AGG | - | chr3_4:60807505-60807524 | Msa0511300:intron | 40.0% | |
| GTGTAAAGCAAAAGCTGGAT+GGG | - | chr3_4:60807557-60807576 | Msa0511300:intron | 40.0% | |
| CACGAGCTAATTTCTACCAT+TGG | - | chr3_4:60807855-60807874 | Msa0511300:intron | 40.0% | |
| ! | GTGACTTTTTGATCCAATGG+TGG | - | chr3_4:60807909-60807928 | Msa0511300:intron | 40.0% |
| ! | CAAGTGTCTTTTTCCACCAT+TGG | + | chr3_4:60807925-60807944 | None:intergenic | 40.0% |
| AGACTAGACGACTACTCATA+CGG | - | chr3_4:60808059-60808078 | Msa0511300:intron | 40.0% | |
| TTTCATTTATTTGCCCCCCA+TGG | + | chr3_4:60808194-60808213 | None:intergenic | 40.0% | |
| TGAGTTGTTGTACCTGCAAA+TGG | + | chr3_4:60808267-60808286 | None:intergenic | 40.0% | |
| GATCAGAATCGATTGCATCT+TGG | + | chr3_4:60808291-60808310 | None:intergenic | 40.0% | |
| CACCTTGAGTGATCTTGTAT+AGG | - | chr3_4:60808371-60808390 | Msa0511300:CDS | 40.0% | |
| CTTGAGTGATCTTGTATAGG+CGG | - | chr3_4:60808374-60808393 | Msa0511300:CDS | 40.0% | |
| TAGGCGGCTTATATTCATGT+TGG | - | chr3_4:60808390-60808409 | Msa0511300:CDS | 40.0% | |
| TATACGGTCACCATTTGCCA+GGG | + | chr3_4:60800304-60800323 | None:intergenic | 45.0% | |
| TTATACGGTCACCATTTGCC+AGG | + | chr3_4:60800305-60800324 | None:intergenic | 45.0% | |
| GGCAAATGGTGACCGTATAA+AGG | - | chr3_4:60800305-60800324 | Msa0511300:three_prime_UTR | 45.0% | |
| GGGAGATTACGTAAATCCCT+TGG | + | chr3_4:60800734-60800753 | None:intergenic | 45.0% | |
| ! | GACTTACAAGTTCTAGCACC+GGG | + | chr3_4:60800754-60800773 | None:intergenic | 45.0% |
| !! | TGCTTATTTTCGAGACCGGA+AGG | + | chr3_4:60801110-60801129 | None:intergenic | 45.0% |
| TGTCACTACAGGTACCTGAA+TGG | + | chr3_4:60801744-60801763 | None:intergenic | 45.0% | |
| GAAATGGTAGCTGTCACTAC+AGG | + | chr3_4:60801755-60801774 | None:intergenic | 45.0% | |
| GGCACGTTTCCTTACTTCAA+AGG | - | chr3_4:60801803-60801822 | Msa0511300:intron | 45.0% | |
| TCCTAAAGTGGTTGAGTGCT+TGG | - | chr3_4:60801958-60801977 | Msa0511300:intron | 45.0% | |
| CCTAAAGTGGTTGAGTGCTT+GGG | - | chr3_4:60801959-60801978 | Msa0511300:intron | 45.0% | |
| ATGTTAGCAAGCCAGATGGA+AGG | + | chr3_4:60802244-60802263 | None:intergenic | 45.0% | |
| !! | TTCCATCTGGCTTGCTAACA+TGG | - | chr3_4:60802243-60802262 | Msa0511300:CDS | 45.0% |
| TTAACCCATAGGATGCTTGG+TGG | - | chr3_4:60802467-60802486 | Msa0511300:intron | 45.0% | |
| ! | TCTGTTTCTTGCTTCCGCTT+TGG | - | chr3_4:60802546-60802565 | Msa0511300:intron | 45.0% |
| TTGCTTCCGCTTTGGTTGAA+TGG | - | chr3_4:60802554-60802573 | Msa0511300:intron | 45.0% | |
| GATACATGGAGAAGAAGGCT+TGG | - | chr3_4:60802861-60802880 | Msa0511300:CDS | 45.0% | |
| !! | CTCTAGTGTTGGTGATTTGC+TGG | - | chr3_4:60802928-60802947 | Msa0511300:intron | 45.0% |
| GATGAAGAAACCTTGGGAAC+AGG | + | chr3_4:60803136-60803155 | None:intergenic | 45.0% | |
| ! | GTTCCTTTTACTCCAAGTGC+TGG | - | chr3_4:60803650-60803669 | Msa0511300:intron | 45.0% |
| ACACCAGCACTTGGAGTAAA+AGG | + | chr3_4:60803656-60803675 | None:intergenic | 45.0% | |
| CATTCAAGAACACCAGCACT+TGG | + | chr3_4:60803665-60803684 | None:intergenic | 45.0% | |
| !! | CAAGTGCTGGTGTTCTTGAA+TGG | - | chr3_4:60803663-60803682 | Msa0511300:intron | 45.0% |
| GTTAATGGCACTCTTCCTCT+CGG | - | chr3_4:60803686-60803705 | Msa0511300:intron | 45.0% | |
| ATCTCTCGAGCTGAAGTTCA+AGG | + | chr3_4:60803963-60803982 | None:intergenic | 45.0% | |
| TTGAACTTCAGCTCGAGAGA+TGG | - | chr3_4:60803962-60803981 | Msa0511300:intron | 45.0% | |
| GTATTGAGTATATGGGCTCC+AGG | - | chr3_4:60805660-60805679 | Msa0511300:intron | 45.0% | |
| TCTTGTCAAACCACTCAGCT+GGG | + | chr3_4:60805829-60805848 | None:intergenic | 45.0% | |
| AGAACTAGCAGCAACACTTC+GGG | + | chr3_4:60805864-60805883 | None:intergenic | 45.0% | |
| CACTTCAATTCGATCAAGGG+TGG | + | chr3_4:60805939-60805958 | None:intergenic | 45.0% | |
| ! | TAAGTCCTTTTCCAGTGCAC+TGG | - | chr3_4:60806017-60806036 | Msa0511300:intron | 45.0% |
| TTCAACCAGTGCACTGGAAA+AGG | + | chr3_4:60806025-60806044 | None:intergenic | 45.0% | |
| GCAACCCAGCTACAATATGA+AGG | + | chr3_4:60806084-60806103 | None:intergenic | 45.0% | |
| AATTGATCAGACCACTGCAG+AGG | - | chr3_4:60806426-60806445 | Msa0511300:intron | 45.0% | |
| AATGTGAACAACCTCTGCAG+TGG | + | chr3_4:60806440-60806459 | None:intergenic | 45.0% | |
| TGATGCTTAAGACCCCAGAA+CGG | - | chr3_4:60806488-60806507 | Msa0511300:intron | 45.0% | |
| TCAAAGACATACCCGTTCTG+GGG | + | chr3_4:60806503-60806522 | None:intergenic | 45.0% | |
| ! | TGGTGTCAACTAGAGATTCG+TGG | + | chr3_4:60806635-60806654 | None:intergenic | 45.0% |
| ! | CATCTACAGTAATGGAGCAG+AGG | + | chr3_4:60806878-60806897 | None:intergenic | 45.0% |
| TAGATGACCTTGTGACCATG+AGG | - | chr3_4:60806892-60806911 | Msa0511300:CDS | 45.0% | |
| AGATGACCTTGTGACCATGA+GGG | - | chr3_4:60806893-60806912 | Msa0511300:CDS | 45.0% | |
| CAAATTCCCTCATGGTCACA+AGG | + | chr3_4:60806902-60806921 | None:intergenic | 45.0% | |
| AGAGGTTGCAAATTCCCTCA+TGG | + | chr3_4:60806910-60806929 | None:intergenic | 45.0% | |
| ! | TATCTTCTCTATGTGCTGGC+AGG | - | chr3_4:60806989-60807008 | Msa0511300:intron | 45.0% |
| ACGTCTCTTGTGAGCCTAAA+TGG | + | chr3_4:60807017-60807036 | None:intergenic | 45.0% | |
| TGGGTATAACTGGTGTAGAG+GGG | - | chr3_4:60807048-60807067 | Msa0511300:intron | 45.0% | |
| GAAAGCTTTGCAGCGTCAAA+AGG | - | chr3_4:60807277-60807296 | Msa0511300:intron | 45.0% | |
| TGAACAAACTTCGCCGAATG+GGG | + | chr3_4:60807400-60807419 | None:intergenic | 45.0% | |
| GATGAACAAACTTCGCCGAA+TGG | + | chr3_4:60807402-60807421 | None:intergenic | 45.0% | |
| CGTGTAAAGCAAAAGCTGGA+TGG | - | chr3_4:60807556-60807575 | Msa0511300:intron | 45.0% | |
| AAGCTGGATGGGTATGAAGA+TGG | - | chr3_4:60807568-60807587 | Msa0511300:intron | 45.0% | |
| ! | GGTGAAATGCGAAGTATCCA+TGG | - | chr3_4:60807589-60807608 | Msa0511300:intron | 45.0% |
| ! | AATGCGAAGTATCCATGGAC+AGG | - | chr3_4:60807594-60807613 | Msa0511300:intron | 45.0% |
| TATGGCAATCACCAGTGCAA+TGG | + | chr3_4:60808104-60808123 | None:intergenic | 45.0% | |
| GTAACACCCATGGTTAAGGA+TGG | + | chr3_4:60808139-60808158 | None:intergenic | 45.0% | |
| ! | CTTAACCATGGGTGTTACCT+GGG | - | chr3_4:60808141-60808160 | Msa0511300:intron | 45.0% |
| CGATTGTGCCAAATGTTTCC+TGG | - | chr3_4:60808310-60808329 | Msa0511300:CDS | 45.0% | |
| TGTGCCAAATGTTTCCTGGT+TGG | - | chr3_4:60808314-60808333 | Msa0511300:CDS | 45.0% | |
| GTGCCAAATGTTTCCTGGTT+GGG | - | chr3_4:60808315-60808334 | Msa0511300:CDS | 45.0% | |
| TGCCAAATGTTTCCTGGTTG+GGG | - | chr3_4:60808316-60808335 | Msa0511300:CDS | 45.0% | |
| CGCCTATACAAGATCACTCA+AGG | + | chr3_4:60808376-60808395 | None:intergenic | 45.0% | |
| !!! | CTAATTTTTTTTTTTTATTA+AGG | + | chr3_4:60802720-60802739 | None:intergenic | 5.0% |
| !!! | TATTTTTAATTTAATCTTTA+AGG | - | chr3_4:60804557-60804576 | Msa0511300:intron | 5.0% |
| !! | AGAAAAAAAAATTAAAAAAA+AGG | + | chr3_4:60804932-60804951 | None:intergenic | 5.0% |
| CCCAAGCACTCAACCACTTT+AGG | + | chr3_4:60801962-60801981 | None:intergenic | 50.0% | |
| ! | GTTGAGTGCTTGGGTTCTGA+TGG | - | chr3_4:60801968-60801987 | Msa0511300:intron | 50.0% |
| CACCATGTTAGCAAGCCAGA+TGG | + | chr3_4:60802248-60802267 | None:intergenic | 50.0% | |
| GCAACCACCAAGCATCCTAT+GGG | + | chr3_4:60802474-60802493 | None:intergenic | 50.0% | |
| AGCAACCACCAAGCATCCTA+TGG | + | chr3_4:60802475-60802494 | None:intergenic | 50.0% | |
| !! | GGAGAAGAAGGCTTGGTGTT+CGG | - | chr3_4:60802868-60802887 | Msa0511300:CDS | 50.0% |
| AACTTCAGCTCGAGAGATGG+TGG | - | chr3_4:60803965-60803984 | Msa0511300:intron | 50.0% | |
| CTCATGGTCGCTATGGAGTA+GGG | - | chr3_4:60803990-60804009 | Msa0511300:intron | 50.0% | |
| TCATGGTCGCTATGGAGTAG+GGG | - | chr3_4:60803991-60804010 | Msa0511300:intron | 50.0% | |
| CCAGATCCCTAAGTTTCCCT+TGG | + | chr3_4:60805243-60805262 | None:intergenic | 50.0% | |
| CCAAGGGAAACTTAGGGATC+TGG | - | chr3_4:60805240-60805259 | Msa0511300:intron | 50.0% | |
| ! | GGACAAGCGCAAAGCATTTC+AGG | - | chr3_4:60805573-60805592 | Msa0511300:intron | 50.0% |
| CTCTTGTCAAACCACTCAGC+TGG | + | chr3_4:60805830-60805849 | None:intergenic | 50.0% | |
| GATGCTTAAGACCCCAGAAC+GGG | - | chr3_4:60806489-60806508 | Msa0511300:intron | 50.0% | |
| TGAGGCGGCAAAGTTGACAT+TGG | + | chr3_4:60806956-60806975 | None:intergenic | 50.0% | |
| ! | TGTGCTGGCAGGTTCCATTT+AGG | - | chr3_4:60807000-60807019 | Msa0511300:intron | 50.0% |
| GGGTATAACTGGTGTAGAGG+GGG | - | chr3_4:60807049-60807068 | Msa0511300:intron | 50.0% | |
| TGACGCTGCAAAGCTTTCAG+AGG | + | chr3_4:60807275-60807294 | None:intergenic | 50.0% | |
| CTCATACGGTCATACCAACC+AGG | - | chr3_4:60808073-60808092 | Msa0511300:intron | 50.0% | |
| !! | GTGCAATGGAAGTACCTGGT+TGG | + | chr3_4:60808090-60808109 | None:intergenic | 50.0% |
| ACCAGGTACTTCCATTGCAC+TGG | - | chr3_4:60808090-60808109 | Msa0511300:intron | 50.0% | |
| !! | ACCAGTGCAATGGAAGTACC+TGG | + | chr3_4:60808094-60808113 | None:intergenic | 50.0% |
| CCAGGTAACACCCATGGTTA+AGG | + | chr3_4:60808143-60808162 | None:intergenic | 50.0% | |
| ! | CCTTAACCATGGGTGTTACC+TGG | - | chr3_4:60808140-60808159 | Msa0511300:intron | 50.0% |
| CTCCCCAACCAGGAAACATT+TGG | + | chr3_4:60808321-60808340 | None:intergenic | 50.0% | |
| !! | GCTTGGTGTTCGGACGTACA+AGG | - | chr3_4:60802878-60802897 | Msa0511300:CDS | 55.0% |
| ! | TCGAGAGATGGTGGTGCTCA+TGG | - | chr3_4:60803974-60803993 | Msa0511300:intron | 55.0% |
| GCTCATGGTCGCTATGGAGT+AGG | - | chr3_4:60803989-60804008 | Msa0511300:intron | 55.0% | |
| GGGAAACTTAGGGATCTGGC+TGG | - | chr3_4:60805244-60805263 | Msa0511300:intron | 55.0% | |
| GGTTTCTACACCCAGCTGAG+TGG | - | chr3_4:60805816-60805835 | Msa0511300:intron | 55.0% | |
| ATTCGCCCAGGTAACACCCA+TGG | + | chr3_4:60808149-60808168 | None:intergenic | 55.0% | |
| TGTTTCCTGGTTGGGGAGCT+TGG | - | chr3_4:60808323-60808342 | Msa0511300:CDS | 55.0% | |
| CATAACCAAGCTCCCCAACC+AGG | + | chr3_4:60808331-60808350 | None:intergenic | 55.0% | |
| GGAACAGGACCCTGCTGCAA+AGG | + | chr3_4:60803121-60803140 | None:intergenic | 60.0% | |
| GGTGGTGCTCATGGTCGCTA+TGG | - | chr3_4:60803983-60804002 | Msa0511300:intron | 60.0% | |
| GTCGCTATGGAGTAGGGGAC+TGG | - | chr3_4:60803996-60804015 | Msa0511300:intron | 60.0% | |
| GGTGGCATGGCAACCCCATT+CGG | - | chr3_4:60807384-60807403 | Msa0511300:intron | 60.0% | |
| GCAGCAGGGTCCTGTTCCCA+AGG | - | chr3_4:60803123-60803142 | Msa0511300:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 60800297 | 60808427 | 60800297 | ID=Msa0511300;Name=Msa0511300 |
| chr3_4 | mRNA | 60800297 | 60808427 | 60800297 | ID=Msa0511300-mRNA-1;Parent=Msa0511300;Name=Msa0511300-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.85|0.86|0.93|0.85|0.86|15|76|458 |
| chr3_4 | exon | 60800297 | 60800450 | 60800297 | ID=Msa0511300-mRNA-1:exon:14682;Parent=Msa0511300-mRNA-1 |
| chr3_4 | exon | 60801109 | 60801252 | 60801109 | ID=Msa0511300-mRNA-1:exon:14681;Parent=Msa0511300-mRNA-1 |
| chr3_4 | exon | 60801426 | 60801491 | 60801426 | ID=Msa0511300-mRNA-1:exon:14680;Parent=Msa0511300-mRNA-1 |
| chr3_4 | exon | 60801579 | 60801713 | 60801579 | ID=Msa0511300-mRNA-1:exon:14679;Parent=Msa0511300-mRNA-1 |
| chr3_4 | exon | 60802214 | 60802345 | 60802214 | ID=Msa0511300-mRNA-1:exon:14678;Parent=Msa0511300-mRNA-1 |
| chr3_4 | exon | 60802838 | 60802937 | 60802838 | ID=Msa0511300-mRNA-1:exon:14677;Parent=Msa0511300-mRNA-1 |
| chr3_4 | exon | 60803110 | 60803156 | 60803110 | ID=Msa0511300-mRNA-1:exon:14676;Parent=Msa0511300-mRNA-1 |
| chr3_4 | exon | 60803911 | 60803956 | 60803911 | ID=Msa0511300-mRNA-1:exon:14675;Parent=Msa0511300-mRNA-1 |
| chr3_4 | exon | 60804998 | 60805077 | 60804998 | ID=Msa0511300-mRNA-1:exon:14674;Parent=Msa0511300-mRNA-1 |
| chr3_4 | exon | 60805825 | 60805914 | 60805825 | ID=Msa0511300-mRNA-1:exon:14673;Parent=Msa0511300-mRNA-1 |
| chr3_4 | exon | 60806679 | 60806787 | 60806679 | ID=Msa0511300-mRNA-1:exon:14672;Parent=Msa0511300-mRNA-1 |
| chr3_4 | exon | 60806881 | 60806975 | 60806881 | ID=Msa0511300-mRNA-1:exon:14671;Parent=Msa0511300-mRNA-1 |
| chr3_4 | exon | 60807958 | 60808017 | 60807958 | ID=Msa0511300-mRNA-1:exon:14670;Parent=Msa0511300-mRNA-1 |
| chr3_4 | exon | 60808150 | 60808206 | 60808150 | ID=Msa0511300-mRNA-1:exon:14669;Parent=Msa0511300-mRNA-1 |
| chr3_4 | exon | 60808290 | 60808427 | 60808290 | ID=Msa0511300-mRNA-1:exon:14668;Parent=Msa0511300-mRNA-1 |
| chr3_4 | CDS | 60808290 | 60808427 | 60808290 | ID=Msa0511300-mRNA-1:cds;Parent=Msa0511300-mRNA-1 |
| chr3_4 | CDS | 60808150 | 60808206 | 60808150 | ID=Msa0511300-mRNA-1:cds;Parent=Msa0511300-mRNA-1 |
| chr3_4 | CDS | 60807958 | 60808017 | 60807958 | ID=Msa0511300-mRNA-1:cds;Parent=Msa0511300-mRNA-1 |
| chr3_4 | CDS | 60806881 | 60806975 | 60806881 | ID=Msa0511300-mRNA-1:cds;Parent=Msa0511300-mRNA-1 |
| chr3_4 | CDS | 60806679 | 60806787 | 60806679 | ID=Msa0511300-mRNA-1:cds;Parent=Msa0511300-mRNA-1 |
| chr3_4 | CDS | 60805825 | 60805914 | 60805825 | ID=Msa0511300-mRNA-1:cds;Parent=Msa0511300-mRNA-1 |
| chr3_4 | CDS | 60804998 | 60805077 | 60804998 | ID=Msa0511300-mRNA-1:cds;Parent=Msa0511300-mRNA-1 |
| chr3_4 | CDS | 60803911 | 60803956 | 60803911 | ID=Msa0511300-mRNA-1:cds;Parent=Msa0511300-mRNA-1 |
| chr3_4 | CDS | 60803110 | 60803156 | 60803110 | ID=Msa0511300-mRNA-1:cds;Parent=Msa0511300-mRNA-1 |
| chr3_4 | CDS | 60802838 | 60802937 | 60802838 | ID=Msa0511300-mRNA-1:cds;Parent=Msa0511300-mRNA-1 |
| chr3_4 | CDS | 60802214 | 60802345 | 60802214 | ID=Msa0511300-mRNA-1:cds;Parent=Msa0511300-mRNA-1 |
| chr3_4 | CDS | 60801579 | 60801713 | 60801579 | ID=Msa0511300-mRNA-1:cds;Parent=Msa0511300-mRNA-1 |
| chr3_4 | CDS | 60801426 | 60801491 | 60801426 | ID=Msa0511300-mRNA-1:cds;Parent=Msa0511300-mRNA-1 |
| chr3_4 | CDS | 60801109 | 60801252 | 60801109 | ID=Msa0511300-mRNA-1:cds;Parent=Msa0511300-mRNA-1 |
| chr3_4 | CDS | 60800373 | 60800450 | 60800373 | ID=Msa0511300-mRNA-1:cds;Parent=Msa0511300-mRNA-1 |
| chr3_4 | three_prime_UTR | 60800297 | 60800372 | 60800297 | ID=Msa0511300-mRNA-1:three_prime_utr;Parent=Msa0511300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
