AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0032090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032090 MtrunA17_Chr1g0190351 98.133 964 16 2 1 964 33 994 0.0 1931
Msa0032090 MtrunA17_Chr8g0349601 36.842 76 48 0 288 363 203 278 8.43e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032090 AT2G21440.1 47.410 1023 416 20 24 964 21 1003 0.0 805
Msa0032090 AT1G54080.1 27.103 214 127 5 199 400 64 260 5.99e-11 66.2

Find 219 sgRNAs with CRISPR-Local

Find 553 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCTTCCTTTGGTTCTTT+TGG 0.108090 1_1:+59014068 None:intergenic
TCTGTTTCCTTGGAAGTTTC+AGG 0.151548 1_1:+59009421 None:intergenic
TGCTTCTGGGATGGGTATTT+TGG 0.157301 1_1:-59009117 Msa0032090:CDS
CGTTACGAAGTTTCAATTTC+TGG 0.157364 1_1:+59007907 None:intergenic
TTAACAGTTTCCTTGGATTT+TGG 0.171316 1_1:+59009499 None:intergenic
ACTGAATCTTTGTTCTTCTT+TGG 0.190926 1_1:+59007420 None:intergenic
GGGGTCCCCTTTCTGTCTTT+TGG 0.224958 1_1:+59007674 None:intergenic
TCAACTGCCAATACTGCTTC+TGG 0.228699 1_1:-59009131 Msa0032090:CDS
AAGAAAGAAGACGCAGTATT+TGG 0.233382 1_1:-59007498 Msa0032090:CDS
GTAATTTAGCACCATGATTC+TGG 0.234712 1_1:+59007568 None:intergenic
GGTAAGGGGTAGACCATTAA+AGG 0.238442 1_1:-59009096 Msa0032090:CDS
GTTGCTAGAACTGTTATATT+TGG 0.244405 1_1:-59013645 Msa0032090:CDS
AGAGCCTTTAAAACCTTTAA+TGG 0.253378 1_1:+59009083 None:intergenic
GATAAAGACAGCGGATTATC+TGG 0.273260 1_1:-59014113 Msa0032090:CDS
AGGCCAAAGAAAATGAAATA+AGG 0.273524 1_1:-59012024 Msa0032090:CDS
AAACTCAATGGATCGAAGTT+TGG 0.305477 1_1:-59011683 Msa0032090:CDS
TTTCATCTGCGGGGACTGTA+TGG 0.307723 1_1:-59011994 Msa0032090:CDS
CACTTCGGTATTTGTACTCT+TGG 0.308629 1_1:+59007653 None:intergenic
TCCACAATTGGCCGATGTTC+AGG 0.314138 1_1:+59007948 None:intergenic
TTCCTTTCCGAAGAAGCTTT+TGG 0.331812 1_1:+59007612 None:intergenic
TAACCAACCTGCCGAATTAC+AGG 0.333219 1_1:+59008442 None:intergenic
TCTACACAACATCGTGGTTT+TGG 0.333522 1_1:-59015260 Msa0032090:CDS
ACTTCGGTATTTGTACTCTT+GGG 0.335882 1_1:+59007654 None:intergenic
ATAGTTCCATTGACAGTAAT+AGG 0.336958 1_1:-59007533 Msa0032090:CDS
CACCATGATTCTGGCCATCT+TGG 0.340703 1_1:+59007577 None:intergenic
CAATCGCAACCTTCTTCCTT+TGG 0.342154 1_1:+59014059 None:intergenic
TGTCAGAAACCTTCCTTTCA+AGG 0.342388 1_1:-59012129 Msa0032090:intron
TTTCATAACAAAATTATGAT+TGG 0.345149 1_1:+59007274 None:intergenic
CAAATCAACTTCTGTTTCCT+TGG 0.354494 1_1:+59009411 None:intergenic
GTCGTCTCATAGCTGTTGAT+TGG 0.358840 1_1:-59011658 Msa0032090:CDS
AACTCAATGGATCGAAGTTT+GGG 0.358983 1_1:-59011682 Msa0032090:CDS
GTTATTTACAGATTCGTCTT+TGG 0.369847 1_1:+59009552 None:intergenic
AAGCAGGGGAAAAGGTTTCT+AGG 0.374787 1_1:-59007449 Msa0032090:CDS
TGCACCCTTAACAGTTTCCT+TGG 0.378021 1_1:+59009492 None:intergenic
CTGTTTCATGGTTACACAAA+AGG 0.379270 1_1:-59015362 Msa0032090:CDS
GACAGTAATAGGAAAATATC+AGG 0.382523 1_1:-59007522 Msa0032090:CDS
CTATTAAGCATCCCCTTTCA+AGG 0.383007 1_1:-59013554 Msa0032090:CDS
ACCATGAAACAGCGTCTAAC+AGG 0.384092 1_1:+59015373 None:intergenic
GCTGAAACCCCTTCGGCAGC+TGG 0.384100 1_1:+59008862 None:intergenic
CTGAGAGTTAGTGAAGGAAT+AGG 0.388327 1_1:+59015516 None:intergenic
AGAACCCTTGTGTGAGAACT+TGG 0.390972 1_1:+59007347 None:intergenic
CTCTGAAGCAGGAGCATCAT+TGG 0.391724 1_1:+59011604 None:intergenic
AAAATCCAAGGAAACTGTTA+AGG 0.392787 1_1:-59009497 Msa0032090:CDS
AAAGGCTCTGGACAAGAAAT+CGG 0.400061 1_1:-59009069 Msa0032090:CDS
CCGTGTTCACTATTTGAATC+TGG 0.400337 1_1:+59007738 None:intergenic
GCTAGAACTGTTATATTTGG+TGG 0.404207 1_1:-59013642 Msa0032090:CDS
ACCTGTTAGACGCTGTTTCA+TGG 0.405122 1_1:-59015374 Msa0032090:CDS
CACCGCCAAGCCAGAGAAAT+CGG 0.405483 1_1:-59013588 Msa0032090:CDS
ATCTAATTCAAAGGGAAGAT+TGG 0.406524 1_1:+59009369 None:intergenic
GAACAAACTTTCAGTGAAGT+TGG 0.409004 1_1:-59015397 Msa0032090:CDS
AAGCTTCCATTTCTGAGTCT+TGG 0.414414 1_1:+59012154 None:intergenic
AGACCACCGCAATCTTTACT+TGG 0.416144 1_1:-59009006 Msa0032090:CDS
TCCTGTGTGCAGTCTTTCAA+AGG 0.416759 1_1:-59011851 Msa0032090:intron
AAACCGTTGCTTCACTTCTT+CGG 0.420518 1_1:+59009345 None:intergenic
TTAGAAACAAAGAGTGTTAA+CGG 0.425518 1_1:+59015544 None:intergenic
TGCGTAAACTCCCGCATTGT+CGG 0.425962 1_1:+59007821 None:intergenic
TGAGCTGAAGAACGGTTCAT+TGG 0.431497 1_1:-59014385 Msa0032090:CDS
GGCCAAAGAAAATGAAATAA+GGG 0.433746 1_1:-59012023 Msa0032090:CDS
AGAAAGTCCAAAAGCTTCTT+CGG 0.435552 1_1:-59007619 Msa0032090:CDS
CCAAGCAAATACCTGTAATT+CGG 0.436673 1_1:-59008453 Msa0032090:CDS
TTGGTCACTTGGTGGAGAAC+AGG 0.437156 1_1:+59009292 None:intergenic
CTGAAGATCATTCCTTGAAA+GGG 0.446240 1_1:+59013542 None:intergenic
ACACACAGTGCCGATTTCTC+TGG 0.447857 1_1:+59013578 None:intergenic
TGCCGATTTCTCTGGCTTGG+CGG 0.449281 1_1:+59013586 None:intergenic
CAACTGCCAATACTGCTTCT+GGG 0.451408 1_1:-59009130 Msa0032090:CDS
AAATTTAATATAAACAACTT+AGG 0.453008 1_1:-59006806 Msa0032090:three_prime_UTR
AGAGTTCTTAACAATAATCC+TGG 0.454597 1_1:-59008212 Msa0032090:intron
AATCTAAACAGCTTAGGAAA+TGG 0.456031 1_1:-59007299 Msa0032090:CDS
TGAGAGTTAGTGAAGGAATA+GGG 0.456317 1_1:+59015517 None:intergenic
CCTGTGTGCAGTCTTTCAAA+GGG 0.458416 1_1:-59011850 Msa0032090:intron
TGAACCGTTCTTCAGCTCAA+TGG 0.460449 1_1:+59014389 None:intergenic
GGCTTGGCGGTGAACATCTT+CGG 0.460580 1_1:+59013599 None:intergenic
CTAGGACATACTTGGTCACT+TGG 0.461965 1_1:+59009281 None:intergenic
GCGTAAACTCCCGCATTGTC+GGG 0.462564 1_1:+59007822 None:intergenic
GCCAATACTGCTTCTGGGAT+GGG 0.465705 1_1:-59009125 Msa0032090:CDS
TCAAGAGCAAACTCCACAAT+TGG 0.466178 1_1:+59007936 None:intergenic
TAACGGCGGACATTGTTTAA+CGG 0.467270 1_1:+59015561 None:intergenic
ATCGGCTCATGACAAGGAAC+AGG 0.468605 1_1:-59009051 Msa0032090:CDS
GAAAGAAAGAGAAAGAAGGA+AGG 0.470132 1_1:+59015654 None:intergenic
ACCCATCCCAGAAGCAGTAT+TGG 0.471074 1_1:+59009124 None:intergenic
TTTGGGCACGCCAACTTGGT+GGG 0.473129 1_1:-59012870 Msa0032090:CDS
ACTGTTTGGGCACGCCAACT+TGG 0.473827 1_1:-59012874 Msa0032090:CDS
CCAAGAACAAGCAGGGGAAA+AGG 0.475052 1_1:-59007457 Msa0032090:CDS
CACCCACCCGGTCCATAATG+AGG 0.475726 1_1:-59015709 None:intergenic
CGTTCTTCAGCTCAATGGCT+TGG 0.475932 1_1:+59014394 None:intergenic
TAGGAGGGACTTATTCTTGA+CGG 0.477564 1_1:-59008889 Msa0032090:CDS
CAGGCGATTCGAAAACTCAA+TGG 0.479592 1_1:-59011695 Msa0032090:CDS
AGATGAGGCTCAAAAGAAGT+AGG 0.479760 1_1:+59007223 None:intergenic
TGCAGGCGTCCACGAGGGAC+TGG 0.480915 1_1:-59009197 Msa0032090:intron
GGCAAATCCAAAAGACAGAA+AGG 0.484725 1_1:-59007681 Msa0032090:CDS
TACAGATTCGTCTTTGGCAG+AGG 0.486047 1_1:+59009558 None:intergenic
TGCCAATACTGCTTCTGGGA+TGG 0.486395 1_1:-59009126 Msa0032090:CDS
GTTTGGGCACGCCAACTTGG+TGG 0.487001 1_1:-59012871 Msa0032090:CDS
CGAAGATCGAAACCGGATCA+AGG 0.488053 1_1:-59014306 Msa0032090:intron
CAGTGCCGATTTCTCTGGCT+TGG 0.490360 1_1:+59013583 None:intergenic
AGCATCAATCAACCTTGATC+CGG 0.491692 1_1:+59014294 None:intergenic
AATGATAAACCCGACAATGC+GGG 0.495453 1_1:-59007831 Msa0032090:CDS
CTATTCCTTCACTAACTCTC+AGG 0.495586 1_1:-59015515 Msa0032090:intron
GATTTCTTTAGGACAACAAA+AGG 0.498067 1_1:-59009758 Msa0032090:intron
TCGTCTCATAGCTGTTGATT+GGG 0.499678 1_1:-59011657 Msa0032090:CDS
TGTTTCATGGTTACACAAAA+GGG 0.499866 1_1:-59015361 Msa0032090:intron
TCATTGACCACAGAAACCTT+TGG 0.500631 1_1:-59007972 Msa0032090:intron
TTCTCACACAAGGGTTCTCA+AGG 0.501028 1_1:-59007342 Msa0032090:CDS
ACGGTTCATTGGTTGGTGAC+CGG 0.501056 1_1:-59014374 Msa0032090:CDS
AGGGAGCCAAGACTCAGAAA+TGG 0.503890 1_1:-59012160 Msa0032090:CDS
AGAAATATCTGAAACCTTGT+CGG 0.504739 1_1:+59009447 None:intergenic
CATCATCATCGGCGAGGCGA+TGG 0.506850 1_1:-59015626 Msa0032090:exon
GCAAATCCAAAAGACAGAAA+GGG 0.507205 1_1:-59007680 Msa0032090:CDS
TGAAAATCGAAGATCGAAAC+CGG 0.507609 1_1:-59014313 Msa0032090:CDS
GGGAAAAGGTTTCTAGGAAA+AGG 0.509364 1_1:-59007443 Msa0032090:CDS
CCGAATTACAGGTATTTGCT+TGG 0.511846 1_1:+59008453 None:intergenic
TCTTCGGTATCTAATTCAAA+GGG 0.513395 1_1:+59009361 None:intergenic
GCTGAAGATCATTCCTTGAA+AGG 0.515929 1_1:+59013541 None:intergenic
CACGGTGGTAGAGTGCCAAA+TGG 0.516262 1_1:-59007720 Msa0032090:CDS
TCAACAGATCGAACCTTGAA+AGG 0.517773 1_1:+59012116 None:intergenic
TTCATCTGCGGGGACTGTAT+GGG 0.521165 1_1:-59011993 Msa0032090:CDS
AAGACGCAGTATTTGGAAAG+AGG 0.521867 1_1:-59007491 Msa0032090:CDS
ATCAGTGGCTGAAACCCCTT+CGG 0.522666 1_1:+59008855 None:intergenic
TTCTTCGGTATCTAATTCAA+AGG 0.523243 1_1:+59009360 None:intergenic
GACGGAACTCCAGCTGCCGA+AGG 0.523716 1_1:-59008871 Msa0032090:CDS
CAATGATGCTCCTGCTTCAG+AGG 0.523848 1_1:-59011603 Msa0032090:CDS
CAGATCGAACCTTGAAAGGA+AGG 0.524767 1_1:+59012120 None:intergenic
GAAATATTTATAGTTTGGAA+AGG 0.525585 1_1:-59008609 Msa0032090:intron
GAACAAAGATTCAGTAGGGA+AGG 0.527716 1_1:-59007412 Msa0032090:CDS
AACCAAGATGGCCAGAATCA+TGG 0.528146 1_1:-59007579 Msa0032090:CDS
TCCTGAACATCGGCCAATTG+TGG 0.528514 1_1:-59007949 Msa0032090:CDS
AAATCCAAGGAAACTGTTAA+GGG 0.531440 1_1:-59009496 Msa0032090:CDS
CTTCGGTATTTGTACTCTTG+GGG 0.533027 1_1:+59007655 None:intergenic
CCAAAAGAACCAAAGGAAGA+AGG 0.533227 1_1:-59014068 Msa0032090:intron
AAGAAGAACAAAGATTCAGT+AGG 0.534680 1_1:-59007417 Msa0032090:CDS
GATGCAATAGAGGGCAATGA+AGG 0.535517 1_1:-59014161 Msa0032090:intron
AAATTACCTTCCTCTGAAGC+AGG 0.535871 1_1:+59011593 None:intergenic
TGCATTATCAGCTGCTTCCG+CGG 0.535875 1_1:+59009157 None:intergenic
ATGCATAACCAAGAACAAGC+AGG 0.537887 1_1:-59007465 Msa0032090:CDS
TTCCCAGGTCTGCTGCAAGA+AGG 0.538150 1_1:-59012991 Msa0032090:intron
GCAAATACCTGTAATTCGGC+AGG 0.538494 1_1:-59008449 Msa0032090:intron
TTCTAAGCCTGAAACTTCCA+AGG 0.542108 1_1:-59009428 Msa0032090:CDS
GATGCTCCTGCTTCAGAGGA+AGG 0.546927 1_1:-59011599 Msa0032090:intron
ACTGACAAAGAATCTGATCA+AGG 0.547224 1_1:-59009688 Msa0032090:CDS
TGGCCGATGTTCAGGACCAA+AGG 0.547311 1_1:+59007956 None:intergenic
GGACATACTTGGTCACTTGG+TGG 0.548184 1_1:+59009284 None:intergenic
TGATGAAAGAAAGAGAAAGA+AGG 0.551835 1_1:+59015650 None:intergenic
AAAGAACAAGCCAAAATCCA+AGG 0.552898 1_1:-59009509 Msa0032090:CDS
ACGGAACTCCAGCTGCCGAA+GGG 0.553197 1_1:-59008870 Msa0032090:CDS
CAATGTTGCAACAGAAGCAC+GGG 0.556088 1_1:+59012921 None:intergenic
TTGGGCACGCCAACTTGGTG+GGG 0.556141 1_1:-59012869 Msa0032090:CDS
AAAGAAAGAGAAAGAAGGAA+GGG 0.558529 1_1:+59015655 None:intergenic
TGGTCTCGTGAATTCTGCTA+TGG 0.558745 1_1:-59013622 Msa0032090:CDS
GGCACGCCAACTTGGTGGGG+AGG 0.559247 1_1:-59012866 Msa0032090:intron
CATGGTGCTAAATTACATGA+AGG 0.559370 1_1:-59007561 Msa0032090:CDS
TTCAGTTCCAAAAGAACCAA+AGG 0.560178 1_1:-59014075 Msa0032090:CDS
ATCATCATCGGCGAGGCGAT+GGG 0.563341 1_1:-59015625 Msa0032090:exon
ATTCAAGAAAAGCGACTCCA+CGG 0.563574 1_1:+59008267 None:intergenic
CTGAAGAACGGTTCATTGGT+TGG 0.563589 1_1:-59014381 Msa0032090:CDS
CAAGAAATCGGCTCATGACA+AGG 0.564214 1_1:-59009057 Msa0032090:CDS
ACTTTACCTCCCCACCAAGT+TGG 0.564510 1_1:+59012860 None:intergenic
TTGTAATGACACAGCAGATG+AGG 0.565429 1_1:-59013886 Msa0032090:CDS
GTCCAAAAGCTTCTTCGGAA+AGG 0.566021 1_1:-59007614 Msa0032090:CDS
AGAAGAACAAAGATTCAGTA+GGG 0.570029 1_1:-59007416 Msa0032090:CDS
CAAATCCAAAAGACAGAAAG+GGG 0.571325 1_1:-59007679 Msa0032090:CDS
GAAAGATGGCAGGAAAGGAA+AGG 0.571880 1_1:-59008312 Msa0032090:CDS
TGCATAACCAAGAACAAGCA+GGG 0.575155 1_1:-59007464 Msa0032090:CDS
GATGAGGCTCAAAAGAAGTA+GGG 0.575330 1_1:+59007224 None:intergenic
TGTAATGACACAGCAGATGA+GGG 0.575965 1_1:-59013885 Msa0032090:CDS
TGACAAACCAGCAAAAGACT+TGG 0.576336 1_1:-59007763 Msa0032090:CDS
GCAATGTTGCAACAGAAGCA+CGG 0.579403 1_1:+59012920 None:intergenic
TTCTTTCGATGAGATCACTT+CGG 0.585525 1_1:+59007638 None:intergenic
CCGCAATCTTTACTTGGCGA+AGG 0.588434 1_1:-59009000 Msa0032090:intron
CGGAACTCCAGCTGCCGAAG+GGG 0.589924 1_1:-59008869 Msa0032090:CDS
AAAGCTACAGTATCAGCAGC+GGG 0.590881 1_1:-59007883 Msa0032090:CDS
TTCAAGAAAAGCGACTCCAC+GGG 0.595349 1_1:+59008268 None:intergenic
TTGTCAAAATCATCGTCAGA+AGG 0.599134 1_1:+59009625 None:intergenic
CAAAAGGTGACAGATGAAGA+TGG 0.601633 1_1:-59009742 Msa0032090:CDS
AAAACTACAAAATTAAGTCA+TGG 0.604774 1_1:-59006871 Msa0032090:three_prime_UTR
AACCCTCATTATGGACCGGG+TGG 0.605330 1_1:+59015706 None:intergenic
TACCCTGTGTCGGACTTCTG+TGG 0.606080 1_1:+59011959 None:intergenic
TAATGACACAGCAGATGAGG+GGG 0.608560 1_1:-59013883 Msa0032090:CDS
ATTCCACAGAAGTCCGACAC+AGG 0.608649 1_1:-59011962 Msa0032090:CDS
AGGAATGATCTTCAGCAGCA+TGG 0.610357 1_1:-59013534 Msa0032090:intron
ACCCACCCGGTCCATAATGA+GGG 0.613936 1_1:-59015708 None:intergenic
AAGGAATATATACCCTGTGT+CGG 0.616888 1_1:+59011949 None:intergenic
ACTTGAAATAACTCAAGATG+AGG 0.618188 1_1:+59007208 None:intergenic
AAGGGTTCTCAAGGAAATGA+CGG 0.619296 1_1:-59007333 Msa0032090:CDS
CAGCAGCGGGCTCCTCACAA+TGG 0.623421 1_1:-59007870 Msa0032090:CDS
TAGATCCAAGTTCTCACACA+AGG 0.623451 1_1:-59007352 Msa0032090:CDS
TTTCTGCTGTTGCCATTGTG+AGG 0.623452 1_1:+59007858 None:intergenic
TGAAGATCATTCCTTGAAAG+GGG 0.624383 1_1:+59013543 None:intergenic
CAAGCCATTGAGCTGAAGAA+CGG 0.627871 1_1:-59014393 Msa0032090:CDS
ATCTGCGGGGACTGTATGGG+AGG 0.628989 1_1:-59011990 Msa0032090:CDS
AAATGATAAACCCGACAATG+CGG 0.629902 1_1:-59007832 Msa0032090:CDS
CCAAATGGAAAATCTCCTCA+AGG 0.629918 1_1:-59007705 Msa0032090:CDS
CCAGATTCAAATAGTGAACA+CGG 0.633933 1_1:-59007738 Msa0032090:CDS
AAACCTTTGGTCCTGAACAT+CGG 0.642171 1_1:-59007959 Msa0032090:CDS
GAGTACCTGAGAGTTAGTGA+AGG 0.642979 1_1:+59015510 None:intergenic
GTAATGACACAGCAGATGAG+GGG 0.644262 1_1:-59013884 Msa0032090:CDS
TCATGGTAACTAACATAGCA+CGG 0.646595 1_1:-59006854 Msa0032090:three_prime_UTR
CAAGAACAGCAGTATTCCCG+TGG 0.650331 1_1:-59008284 Msa0032090:CDS
ACCCTCATTATGGACCGGGT+GGG 0.652142 1_1:+59015707 None:intergenic
AGATGGTAGTACTACTACTG+AGG 0.654593 1_1:-59009725 Msa0032090:CDS
ATACCGAAGAAGTGAAGCAA+CGG 0.656518 1_1:-59009348 Msa0032090:CDS
AATGCGGGAGTTTACGCACA+TGG 0.658005 1_1:-59007816 Msa0032090:CDS
TAGTGATATTGATAGTGTTG+TGG 0.658825 1_1:-59009659 Msa0032090:CDS
CTCAATGCAGGCGTCCACGA+GGG 0.661595 1_1:-59009202 Msa0032090:intron
TGATATTGATAGTGTTGTGG+AGG 0.663472 1_1:-59009656 Msa0032090:CDS
TTCCACAGAAGTCCGACACA+GGG 0.667711 1_1:-59011961 Msa0032090:intron
TTAAGAAAACCAGTCCCTCG+TGG 0.669577 1_1:+59009188 None:intergenic
ATGAAGGAAAATAGCGACGA+CGG 0.674278 1_1:-59015586 Msa0032090:CDS
GCATAACCAAGAACAAGCAG+GGG 0.676330 1_1:-59007463 Msa0032090:CDS
AACATCTAAAGAGTCCGACA+AGG 0.679032 1_1:-59009461 Msa0032090:CDS
ACTCAATGCAGGCGTCCACG+AGG 0.680693 1_1:-59009203 Msa0032090:intron
AAAAGCTACAGTATCAGCAG+CGG 0.686433 1_1:-59007884 Msa0032090:CDS
AGATCCAAGTTCTCACACAA+GGG 0.701976 1_1:-59007351 Msa0032090:CDS
TCGCCAAGTAAAGATTGCGG+TGG 0.704028 1_1:+59009003 None:intergenic
TCAGGGTCTACACAACATCG+TGG 0.720317 1_1:-59015266 Msa0032090:intron
AATGGAAAATCTCCTCAAGG+AGG 0.725686 1_1:-59007702 Msa0032090:CDS
AATGACACAGCAGATGAGGG+GGG 0.726717 1_1:-59013882 Msa0032090:CDS
CCTTCGCCAAGTAAAGATTG+CGG 0.731180 1_1:+59009000 None:intergenic
GAAACAAAGAGTGTTAACGG+CGG 0.786080 1_1:+59015547 None:intergenic
GATTCAAATAGTGAACACGG+TGG 0.855909 1_1:-59007735 Msa0032090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGAATGATAAATAAAAA+TGG + chr1_1:59006970-59006989 None:intergenic 10.0%
!!! AAATAAGTTTTTTTTTTTTC+AGG - chr1_1:59007142-59007161 Msa0032090:intron 10.0%
!!! AATAAGTTTTTTTTTTTTCA+GGG - chr1_1:59007143-59007162 Msa0032090:intron 10.0%
!! TTCTAATAATATATGTAAAA+TGG + chr1_1:59007936-59007955 None:intergenic 10.0%
!!! TTTTGTATTGATTTTTAATT+TGG - chr1_1:59010154-59010173 Msa0032090:intron 10.0%
!!! ACATAAAATAATTTTTTGTT+TGG - chr1_1:59010341-59010360 Msa0032090:intron 10.0%
!! TTTCATTAATAAATAGTTAT+TGG - chr1_1:59011314-59011333 Msa0032090:intron 10.0%
!! TTATTATATTTATGTATATG+TGG + chr1_1:59011788-59011807 None:intergenic 10.0%
!!! AAAAATTACTTATTTTAATG+AGG - chr1_1:59011854-59011873 Msa0032090:intron 10.0%
!!! TCTTTTAAATTGTAATTAAT+AGG - chr1_1:59013518-59013537 Msa0032090:intron 10.0%
!! AAATTTAATATAAACAACTT+AGG - chr1_1:59015620-59015639 Msa0032090:exon 10.0%
!! TAAATAAAAATGGAAAAGAA+TGG + chr1_1:59006960-59006979 None:intergenic 15.0%
!! TCTATTAAATATCATATCAT+AGG + chr1_1:59007306-59007325 None:intergenic 15.0%
!! ATTTCGATTATTATCAAATA+GGG + chr1_1:59007391-59007410 None:intergenic 15.0%
!! TATTTCGATTATTATCAAAT+AGG + chr1_1:59007392-59007411 None:intergenic 15.0%
!!! CAATTTTTGAACTTTATTAT+AGG - chr1_1:59007779-59007798 Msa0032090:CDS 15.0%
!! TAAATATATAAATGAACAAC+TGG + chr1_1:59008419-59008438 None:intergenic 15.0%
!! TCTATATAAAAGATACTATA+TGG + chr1_1:59009632-59009651 None:intergenic 15.0%
!!! GATTTTTTGTATTTGATTTT+TGG + chr1_1:59009783-59009802 None:intergenic 15.0%
!! AAAAAATCTTAATAACTACA+GGG - chr1_1:59009795-59009814 Msa0032090:intron 15.0%
!! ATTTACGAAATTCAAATTAT+AGG + chr1_1:59010089-59010108 None:intergenic 15.0%
!! ATAATTTGAATTTCGTAAAT+TGG - chr1_1:59010089-59010108 Msa0032090:intron 15.0%
!!! ATGATTATTTTATTGAAAAG+TGG + chr1_1:59011272-59011291 None:intergenic 15.0%
!! ATTAATAAATAGTTATTGGT+GGG - chr1_1:59011318-59011337 Msa0032090:intron 15.0%
!! TGTATATTAGTAGAAAAATA+CGG - chr1_1:59011571-59011590 Msa0032090:intron 15.0%
!!! TCATTTAAAAAAGTACTTTT+TGG + chr1_1:59011981-59012000 None:intergenic 15.0%
!!! AAAAGTACTTTTTTAAATGA+AGG - chr1_1:59011981-59012000 Msa0032090:CDS 15.0%
!!! TCATTTAAAAAAGTACTTTT+TGG + chr1_1:59011981-59012000 None:intergenic 15.0%
!!! AAAAAGTACTTTTTTAAATG+AGG - chr1_1:59011980-59011999 Msa0032090:CDS 15.0%
!! TTTAAATTGTAATTAATAGG+AGG - chr1_1:59013521-59013540 Msa0032090:intron 15.0%
!! TTAAATTGTAATTAATAGGA+GGG - chr1_1:59013522-59013541 Msa0032090:intron 15.0%
!! TTTGTGAAATATTTATAGTT+TGG - chr1_1:59013812-59013831 Msa0032090:intron 15.0%
!!! TGATTGATTCATTTTTATTT+TGG + chr1_1:59014340-59014359 None:intergenic 15.0%
!! TTTCATAACAAAATTATGAT+TGG + chr1_1:59015155-59015174 None:intergenic 15.0%
!! CATTGTACTAAATAACATAT+CGG + chr1_1:59007479-59007498 None:intergenic 20.0%
!!! TATGTTTTTTTCTTTTGGTA+GGG - chr1_1:59008759-59008778 Msa0032090:intron 20.0%
!!! GTTTTGTGTATAATTGTTAT+TGG - chr1_1:59008955-59008974 Msa0032090:intron 20.0%
!! GCATATCATAATTATTAAAC+AGG + chr1_1:59009032-59009051 None:intergenic 20.0%
!! CAAAAAATCTTAATAACTAC+AGG - chr1_1:59009794-59009813 Msa0032090:intron 20.0%
!! TATGCATTGTCTTAAAAAAT+AGG - chr1_1:59009847-59009866 Msa0032090:intron 20.0%
!! ATGCATTGTCTTAAAAAATA+GGG - chr1_1:59009848-59009867 Msa0032090:intron 20.0%
!! ATATCTTAATCTACAAACAT+GGG + chr1_1:59009952-59009971 None:intergenic 20.0%
!! AATATCTTAATCTACAAACA+TGG + chr1_1:59009953-59009972 None:intergenic 20.0%
!!! TTGATTTTTAATTTGGTCAT+AGG - chr1_1:59010161-59010180 Msa0032090:intron 20.0%
!! ATGGTAATATTCATTAAACA+GGG + chr1_1:59010201-59010220 None:intergenic 20.0%
!! AATGGTAATATTCATTAAAC+AGG + chr1_1:59010202-59010221 None:intergenic 20.0%
!! AACAAACTAAGTATCATAAA+TGG + chr1_1:59010220-59010239 None:intergenic 20.0%
!!! TCACTACTAAATATCTTTTT+TGG + chr1_1:59010800-59010819 None:intergenic 20.0%
!! CATTAATAAATAGTTATTGG+TGG - chr1_1:59011317-59011336 Msa0032090:intron 20.0%
!!! AAAATTGCACATTTTCAAAT+GGG - chr1_1:59011611-59011630 Msa0032090:CDS 20.0%
!!! TATTGTTTATAGTTTTGTTG+CGG + chr1_1:59011916-59011935 None:intergenic 20.0%
!!! TATTGTTTATAGTTTTGTTG+CGG + chr1_1:59011916-59011935 None:intergenic 20.0%
!! AATTAATAATTGTTATACCC+AGG + chr1_1:59012426-59012445 None:intergenic 20.0%
!! GAAATATTTATAGTTTGGAA+AGG - chr1_1:59013817-59013836 Msa0032090:intron 20.0%
!!! GTTTTTGAAACATGAAAATT+TGG + chr1_1:59013867-59013886 None:intergenic 20.0%
!! TTGTAACATTCAAAACATAA+TGG + chr1_1:59014070-59014089 None:intergenic 20.0%
!! AATCAATCATAAAATGTGTA+CGG - chr1_1:59014351-59014370 Msa0032090:CDS 20.0%
!!! AAGTTGAGATTTTAATTTCA+TGG - chr1_1:59015376-59015395 Msa0032090:CDS 20.0%
!! TTACTTTAATCTATGACAAT+CGG + chr1_1:59015531-59015550 None:intergenic 20.0%
!! AAAACTACAAAATTAAGTCA+TGG - chr1_1:59015555-59015574 Msa0032090:CDS 20.0%
!!! TTAGAAACAAAGAGTGTTAA+CGG + chr1_1:59006885-59006904 None:intergenic 25.0%
!! TCTTTTTACTTACAAAGATG+GGG + chr1_1:59007617-59007636 None:intergenic 25.0%
!! CTCTTTTTACTTACAAAGAT+GGG + chr1_1:59007618-59007637 None:intergenic 25.0%
!! ACTCTTTTTACTTACAAAGA+TGG + chr1_1:59007619-59007638 None:intergenic 25.0%
! CCATCAAAATATTGTGATTA+CGG + chr1_1:59007895-59007914 None:intergenic 25.0%
!! TTTCTTTTATGATGCAATAG+AGG - chr1_1:59008255-59008274 Msa0032090:CDS 25.0%
!! TTCTTTTATGATGCAATAGA+GGG - chr1_1:59008256-59008275 Msa0032090:CDS 25.0%
! AAAAATGATGATAAAGACAG+CGG - chr1_1:59008304-59008323 Msa0032090:CDS 25.0%
! AAAGATACATCCATAAAGAA+AGG + chr1_1:59008692-59008711 None:intergenic 25.0%
! AAAGAAAAAAACATAGAGCA+AGG + chr1_1:59008754-59008773 None:intergenic 25.0%
!!! TGCTCTATGTTTTTTTCTTT+TGG - chr1_1:59008754-59008773 Msa0032090:intron 25.0%
!!! CTATGTTTTTTTCTTTTGGT+AGG - chr1_1:59008758-59008777 Msa0032090:intron 25.0%
! TTTCAAATTACAGACAAGAT+AGG - chr1_1:59008933-59008952 Msa0032090:intron 25.0%
! AAATATGAACTGAAAAGAAC+AGG + chr1_1:59009061-59009080 None:intergenic 25.0%
! TACTCAACAATTGATCATAT+GGG + chr1_1:59009265-59009284 None:intergenic 25.0%
! ATACTCAACAATTGATCATA+TGG + chr1_1:59009266-59009285 None:intergenic 25.0%
! AAAGATTCTTTATACTGCTT+AGG - chr1_1:59009389-59009408 Msa0032090:CDS 25.0%
! TTAGGATAGTAAGGTAATTA+TGG - chr1_1:59009407-59009426 Msa0032090:CDS 25.0%
! ACATTGCATAAAAAAGAGAT+AGG - chr1_1:59009522-59009541 Msa0032090:CDS 25.0%
!!! AACATTTTTGTTGTTGTATG+TGG - chr1_1:59010240-59010259 Msa0032090:intron 25.0%
!!! ACATTTTTGTTGTTGTATGT+GGG - chr1_1:59010241-59010260 Msa0032090:intron 25.0%
! TCTATCTACTTGACTATATA+TGG - chr1_1:59010375-59010394 Msa0032090:intron 25.0%
! CTTTATATCAGGAAAAGAAA+AGG + chr1_1:59010499-59010518 None:intergenic 25.0%
!! ATTTGTTAACTAGTAGAGTT+TGG - chr1_1:59010902-59010921 Msa0032090:intron 25.0%
! AAATCCTATTGATGTAATTC+TGG - chr1_1:59011089-59011108 Msa0032090:intron 25.0%
! AATCCTATTGATGTAATTCT+GGG - chr1_1:59011090-59011109 Msa0032090:intron 25.0%
!!! AAAATTTTTTCCCACATTGA+GGG + chr1_1:59011191-59011210 None:intergenic 25.0%
!! TCAATGTGGGAAAAAATTTT+GGG - chr1_1:59011191-59011210 Msa0032090:intron 25.0%
! TCAATTGTGTCAAGTATTAT+GGG + chr1_1:59011413-59011432 None:intergenic 25.0%
!! CAAAATTGCACATTTTCAAA+TGG - chr1_1:59011610-59011629 Msa0032090:CDS 25.0%
! TGAAAGAAATAGAGAGAAAA+TGG - chr1_1:59011755-59011774 Msa0032090:intron 25.0%
! GCAACAAAACTATAAACAAT+AGG - chr1_1:59011915-59011934 Msa0032090:intron 25.0%
! GCAACAAAACTATAAACAAT+AGG - chr1_1:59011915-59011934 Msa0032090:intron 25.0%
!! AGCAAATTGTATTTTACCAA+AGG - chr1_1:59012339-59012358 Msa0032090:intron 25.0%
!! GCAAATTGTATTTTACCAAA+GGG - chr1_1:59012340-59012359 Msa0032090:intron 25.0%
! ACATCTGTTATGATTTCTTT+AGG - chr1_1:59012657-59012676 Msa0032090:intron 25.0%
!!! TTTTCTTAAGTTTAAAACCG+CGG - chr1_1:59013252-59013271 Msa0032090:intron 25.0%
!!! TAGACCATTAAAGGTTTTAA+AGG - chr1_1:59013339-59013358 Msa0032090:intron 25.0%
! AAGAAATGAGAATAGTAAAG+TGG + chr1_1:59013683-59013702 None:intergenic 25.0%
!!! CAGATAAAGATTTTGAAAGA+TGG - chr1_1:59014100-59014119 Msa0032090:CDS 25.0%
! TATCTTCACAATTGAGAAAT+GGG + chr1_1:59014255-59014274 None:intergenic 25.0%
! ATATCTTCACAATTGAGAAA+TGG + chr1_1:59014256-59014275 None:intergenic 25.0%
! AAGCTAAAAAATAACCAAGA+TGG - chr1_1:59014835-59014854 Msa0032090:intron 25.0%
!! TATTTTCCTATTACTGTCAA+TGG + chr1_1:59014902-59014921 None:intergenic 25.0%
! AAAAACAATCTAAACAGCTT+AGG - chr1_1:59015121-59015140 Msa0032090:intron 25.0%
!!! TTATCTCTTTGAGATTTTAG+TGG - chr1_1:59015291-59015310 Msa0032090:intron 25.0%
! AAACCAAAAAATCACTCAAA+TGG - chr1_1:59015401-59015420 Msa0032090:CDS 25.0%
AAAGAAAGAGAAAGAAGGAA+GGG + chr1_1:59006774-59006793 None:intergenic 30.0%
TGATGAAAGAAAGAGAAAGA+AGG + chr1_1:59006779-59006798 None:intergenic 30.0%
TCTTTCATCATCATCATCAT+CGG - chr1_1:59006789-59006808 Msa0032090:three_prime_UTR 30.0%
CAAGAAAAACAAAGCAATGA+AGG - chr1_1:59006824-59006843 Msa0032090:three_prime_UTR 30.0%
TGTTTCATGGTTACACAAAA+GGG - chr1_1:59007065-59007084 Msa0032090:intron 30.0%
! GTTTTGTCAAATAACAGCTA+TGG - chr1_1:59007326-59007345 Msa0032090:CDS 30.0%
!! TAAAAAGAGTTCGCCATTTT+TGG - chr1_1:59007629-59007648 Msa0032090:CDS 30.0%
CAAATTGCACTTACCAAAAA+TGG + chr1_1:59007645-59007664 None:intergenic 30.0%
AATACTAAACATGCTACTGT+TGG - chr1_1:59007700-59007719 Msa0032090:CDS 30.0%
AGGAGAATATTGATATCATG+AGG - chr1_1:59007742-59007761 Msa0032090:CDS 30.0%
!! CCGTAATCACAATATTTTGA+TGG - chr1_1:59007892-59007911 Msa0032090:CDS 30.0%
! ATCTCTATCTGAAACAGAAT+TGG + chr1_1:59008159-59008178 None:intergenic 30.0%
CAAATCATCTGTACATCATT+CGG + chr1_1:59008196-59008215 None:intergenic 30.0%
AGAGTGAGAAAAGAAAACAA+GGG + chr1_1:59008236-59008255 None:intergenic 30.0%
AAGAGTGAGAAAAGAAAACA+AGG + chr1_1:59008237-59008256 None:intergenic 30.0%
CCAAAACTTTCACTTCTAAA+AGG + chr1_1:59008471-59008490 None:intergenic 30.0%
!! CCTTTTAGAAGTGAAAGTTT+TGG - chr1_1:59008468-59008487 Msa0032090:CDS 30.0%
! CTGAAGTACTACTAAGAAAA+GGG + chr1_1:59008602-59008621 None:intergenic 30.0%
TTGATCTGATCCTTTCTTTA+TGG - chr1_1:59008679-59008698 Msa0032090:intron 30.0%
GTTGCTAGAACTGTTATATT+TGG - chr1_1:59008781-59008800 Msa0032090:intron 30.0%
AATTGTTGAGTATGCTGATA+AGG - chr1_1:59009273-59009292 Msa0032090:intron 30.0%
TTATACTGCTTAGGATAGTA+AGG - chr1_1:59009398-59009417 Msa0032090:CDS 30.0%
! GTAATTATGGTATTTTTCCC+AGG - chr1_1:59009420-59009439 Msa0032090:CDS 30.0%
TTGCATAAAAAAGAGATAGG+AGG - chr1_1:59009525-59009544 Msa0032090:CDS 30.0%
TGCATAAAAAAGAGATAGGA+GGG - chr1_1:59009526-59009545 Msa0032090:CDS 30.0%
AAAAATAGGGAGTTACATCA+TGG - chr1_1:59009861-59009880 Msa0032090:intron 30.0%
AAAATAGGGAGTTACATCAT+GGG - chr1_1:59009862-59009881 Msa0032090:intron 30.0%
ATCTACAAACATGGGAAATT+AGG + chr1_1:59009944-59009963 None:intergenic 30.0%
! GTTGATAGAAATGTTGAACA+GGG + chr1_1:59010057-59010076 None:intergenic 30.0%
!! AGTTGATAGAAATGTTGAAC+AGG + chr1_1:59010058-59010077 None:intergenic 30.0%
AGTCAAGTAGATAGAAAACA+AGG + chr1_1:59010370-59010389 None:intergenic 30.0%
ACTTGACTATATATGGATAC+AGG - chr1_1:59010382-59010401 Msa0032090:intron 30.0%
AGGCCAAAGAAAATGAAATA+AGG - chr1_1:59010402-59010421 Msa0032090:intron 30.0%
GGCCAAAGAAAATGAAATAA+GGG - chr1_1:59010403-59010422 Msa0032090:intron 30.0%
!! GTCCCTTATTTCATTTTCTT+TGG + chr1_1:59010408-59010427 None:intergenic 30.0%
TTGCACGTTCATTCAAAAAA+TGG + chr1_1:59010994-59011013 None:intergenic 30.0%
AAAATGATTTGACACTTGTG+AGG + chr1_1:59011025-59011044 None:intergenic 30.0%
!!! CAAAATTTTTTCCCACATTG+AGG + chr1_1:59011192-59011211 None:intergenic 30.0%
! CTCAATGTGGGAAAAAATTT+TGG - chr1_1:59011190-59011209 Msa0032090:intron 30.0%
! CAATGTGGGAAAAAATTTTG+GGG - chr1_1:59011192-59011211 Msa0032090:intron 30.0%
! AATGTGGGAAAAAATTTTGG+GGG - chr1_1:59011193-59011212 Msa0032090:intron 30.0%
CTCTATCAAAAGGTCTAAAT+GGG + chr1_1:59011345-59011364 None:intergenic 30.0%
GTCAATTGTGTCAAGTATTA+TGG + chr1_1:59011414-59011433 None:intergenic 30.0%
TTAAGCTCAAAGTTATGCAT+TGG + chr1_1:59011450-59011469 None:intergenic 30.0%
AAATACGGTCAAAGTAAGTT+AGG - chr1_1:59011586-59011605 Msa0032090:intron 30.0%
! TCACATTTGAGGTCTTAAAT+GGG + chr1_1:59011706-59011725 None:intergenic 30.0%
! ATTTAAGACCTCAAATGTGA+GGG - chr1_1:59011706-59011725 Msa0032090:intron 30.0%
AGCTACAAAATGTTCTATGA+AGG - chr1_1:59012227-59012246 Msa0032090:intron 30.0%
ACCACATATTGTTCTAATGT+CGG + chr1_1:59012573-59012592 None:intergenic 30.0%
!! GATTTCTTTAGGACAACAAA+AGG - chr1_1:59012668-59012687 Msa0032090:intron 30.0%
!! TAGTGATATTGATAGTGTTG+TGG - chr1_1:59012767-59012786 Msa0032090:intron 30.0%
GTTATTTACAGATTCGTCTT+TGG + chr1_1:59012877-59012896 None:intergenic 30.0%
! TTAACAGTTTCCTTGGATTT+TGG + chr1_1:59012930-59012949 None:intergenic 30.0%
AAAATCCAAGGAAACTGTTA+AGG - chr1_1:59012929-59012948 Msa0032090:CDS 30.0%
AAATCCAAGGAAACTGTTAA+GGG - chr1_1:59012930-59012949 Msa0032090:CDS 30.0%
! AGAAATATCTGAAACCTTGT+CGG + chr1_1:59012982-59013001 None:intergenic 30.0%
ATCTAATTCAAAGGGAAGAT+TGG + chr1_1:59013060-59013079 None:intergenic 30.0%
TCTTCGGTATCTAATTCAAA+GGG + chr1_1:59013068-59013087 None:intergenic 30.0%
TTCTTCGGTATCTAATTCAA+AGG + chr1_1:59013069-59013088 None:intergenic 30.0%
!! ATATTGTTCTAGGACATACT+TGG + chr1_1:59013156-59013175 None:intergenic 30.0%
CACACACAAAATATTGTTCT+AGG + chr1_1:59013166-59013185 None:intergenic 30.0%
!! AGAGCCTTTAAAACCTTTAA+TGG + chr1_1:59013346-59013365 None:intergenic 30.0%
!!! ATTAAAGGTTTTAAAGGCTC+TGG - chr1_1:59013345-59013364 Msa0032090:intron 30.0%
! CGCAAAAAGTGAGTATTTTA+TGG - chr1_1:59013603-59013622 Msa0032090:CDS 30.0%
TGTATTTGATCTTCCATACT+TGG - chr1_1:59013716-59013735 Msa0032090:intron 30.0%
GTATTTGATCTTCCATACTT+GGG - chr1_1:59013717-59013736 Msa0032090:intron 30.0%
!!! TGTTTTTCAGTCATTGACTT+TGG + chr1_1:59013912-59013931 None:intergenic 30.0%
!! TAAAGATTTTGAAAGATGGC+AGG - chr1_1:59014104-59014123 Msa0032090:CDS 30.0%
AGAGTTCTTAACAATAATCC+TGG - chr1_1:59014214-59014233 Msa0032090:intron 30.0%
! GCTTTGTTAAAATTGTCAAC+TGG - chr1_1:59014295-59014314 Msa0032090:intron 30.0%
!! TTTGGAAGCGTTCAATTTAT+GGG + chr1_1:59014322-59014341 None:intergenic 30.0%
!!! TTTTGGAAGCGTTCAATTTA+TGG + chr1_1:59014323-59014342 None:intergenic 30.0%
ATAGTTCCATTGACAGTAAT+AGG - chr1_1:59014893-59014912 Msa0032090:intron 30.0%
GACAGTAATAGGAAAATATC+AGG - chr1_1:59014904-59014923 Msa0032090:intron 30.0%
ACTGAATCTTTGTTCTTCTT+TGG + chr1_1:59015009-59015028 None:intergenic 30.0%
AAGAAGAACAAAGATTCAGT+AGG - chr1_1:59015009-59015028 Msa0032090:intron 30.0%
AGAAGAACAAAGATTCAGTA+GGG - chr1_1:59015010-59015029 Msa0032090:intron 30.0%
AATCTAAACAGCTTAGGAAA+TGG - chr1_1:59015127-59015146 Msa0032090:intron 30.0%
ACTTGAAATAACTCAAGATG+AGG + chr1_1:59015221-59015240 None:intergenic 30.0%
GAGATAACGCTATTACAAAA+AGG + chr1_1:59015278-59015297 None:intergenic 30.0%
!!! ATGCCATTTGAGTGATTTTT+TGG + chr1_1:59015407-59015426 None:intergenic 30.0%
TCCATTGTTGCATAATAATG+CGG + chr1_1:59015488-59015507 None:intergenic 30.0%
GAATCGAAAAACCCTCATTA+TGG + chr1_1:59006732-59006751 None:intergenic 35.0%
GAAAGAAAGAGAAAGAAGGA+AGG + chr1_1:59006775-59006794 None:intergenic 35.0%
TGAGAGTTAGTGAAGGAATA+GGG + chr1_1:59006912-59006931 None:intergenic 35.0%
GAACAAACTTTCAGTGAAGT+TGG - chr1_1:59007029-59007048 Msa0032090:intron 35.0%
CTGTTTCATGGTTACACAAA+AGG - chr1_1:59007064-59007083 Msa0032090:intron 35.0%
TTGTCAAATAACAGCTATGG+TGG - chr1_1:59007329-59007348 Msa0032090:CDS 35.0%
ACGCTGATATAGCTACTATT+TGG + chr1_1:59007505-59007524 None:intergenic 35.0%
GTGGTGAGTATTAATCATTC+AGG + chr1_1:59007592-59007611 None:intergenic 35.0%
TGCAATTTGAGTGTATTGTC+TGG - chr1_1:59007656-59007675 Msa0032090:CDS 35.0%
GTTCACAAAGCTTAGTTAAG+AGG - chr1_1:59007722-59007741 Msa0032090:CDS 35.0%
TCAAAAATTGTATCCCTCCT+CGG + chr1_1:59007769-59007788 None:intergenic 35.0%
GTGAACATAAAAAGACTACC+CGG + chr1_1:59007839-59007858 None:intergenic 35.0%
! TTTCGATCTTCGATTTTCAC+GGG + chr1_1:59008112-59008131 None:intergenic 35.0%
! GTTTCGATCTTCGATTTTCA+CGG + chr1_1:59008113-59008132 None:intergenic 35.0%
TGAAAATCGAAGATCGAAAC+CGG - chr1_1:59008113-59008132 Msa0032090:intron 35.0%
TTCAGTTCCAAAAGAACCAA+AGG - chr1_1:59008351-59008370 Msa0032090:intron 35.0%
TGGATAAACCGAAAAACTCA+AGG - chr1_1:59008488-59008507 Msa0032090:CDS 35.0%
!!! GCTGCTTTTTTTATTTCCAC+AGG + chr1_1:59008517-59008536 None:intergenic 35.0%
! GCTGAAGTACTACTAAGAAA+AGG + chr1_1:59008603-59008622 None:intergenic 35.0%
GCTAGAACTGTTATATTTGG+TGG - chr1_1:59008784-59008803 Msa0032090:intron 35.0%
TGAAGATCATTCCTTGAAAG+GGG + chr1_1:59008886-59008905 None:intergenic 35.0%
CTGAAGATCATTCCTTGAAA+GGG + chr1_1:59008887-59008906 None:intergenic 35.0%
AACACGAAGTGCAAAACAAT+GGG + chr1_1:59009085-59009104 None:intergenic 35.0%
TTCATACACTAACCATGAGA+TGG + chr1_1:59009111-59009130 None:intergenic 35.0%
! GATGAGATAGTTTTCCAGTT+AGG - chr1_1:59009328-59009347 Msa0032090:CDS 35.0%
!! TTCTTGATTTGCATCCTAAC+TGG + chr1_1:59009345-59009364 None:intergenic 35.0%
GCATAAAAAAGAGATAGGAG+GGG - chr1_1:59009527-59009546 Msa0032090:CDS 35.0%
CATAAAAAAGAGATAGGAGG+GGG - chr1_1:59009528-59009547 Msa0032090:CDS 35.0%
CCAAAAAGAAAACCCTTTCA+AGG + chr1_1:59009915-59009934 None:intergenic 35.0%
! CCTTGAAAGGGTTTTCTTTT+TGG - chr1_1:59009912-59009931 Msa0032090:intron 35.0%
ACGTATCAGAATCAGATACA+AGG + chr1_1:59009996-59010015 None:intergenic 35.0%
AAGGAATATATACCCTGTGT+CGG + chr1_1:59010480-59010499 None:intergenic 35.0%
GTATCGAAACGCTTTATATC+AGG + chr1_1:59010510-59010529 None:intergenic 35.0%
!! AAGTTTCCTGTTTCTGTTTC+AGG - chr1_1:59010712-59010731 Msa0032090:intron 35.0%
AAACTCAATGGATCGAAGTT+TGG - chr1_1:59010743-59010762 Msa0032090:intron 35.0%
AACTCAATGGATCGAAGTTT+GGG - chr1_1:59010744-59010763 Msa0032090:intron 35.0%
AGACCCAGAATTACATCAAT+AGG + chr1_1:59011096-59011115 None:intergenic 35.0%
CTGGGTCTTAGATTTATAGA+AGG - chr1_1:59011108-59011127 Msa0032090:intron 35.0%
! GGTCTTTAACATTTAAGACC+CGG - chr1_1:59011152-59011171 Msa0032090:intron 35.0%
CCTCTATCAAAAGGTCTAAA+TGG + chr1_1:59011346-59011365 None:intergenic 35.0%
! CCATTTAGACCTTTTGATAG+AGG - chr1_1:59011343-59011362 Msa0032090:intron 35.0%
AATGGAGATCCTCTATCAAA+AGG + chr1_1:59011355-59011374 None:intergenic 35.0%
! TTTTGATAGAGGATCTCCAT+TGG - chr1_1:59011354-59011373 Msa0032090:intron 35.0%
TTGTGTCAAGTATTATGGGA+CGG + chr1_1:59011409-59011428 None:intergenic 35.0%
AAAAAAGTGATGTGTCCATG+TGG - chr1_1:59011678-59011697 Msa0032090:CDS 35.0%
! CTCACATTTGAGGTCTTAAA+TGG + chr1_1:59011707-59011726 None:intergenic 35.0%
! CATTTAAGACCTCAAATGTG+AGG - chr1_1:59011705-59011724 Msa0032090:intron 35.0%
!! CGGTAGTTTGTAATTTGTTG+TGG + chr1_1:59011896-59011915 None:intergenic 35.0%
!! CGGTAGTTTGTAATTTGTTG+TGG + chr1_1:59011896-59011915 None:intergenic 35.0%
! CATTTTGTAGCTATGATGCA+TGG + chr1_1:59012219-59012238 None:intergenic 35.0%
TCTTACTGTTGTATGTGCAT+TGG + chr1_1:59012303-59012322 None:intergenic 35.0%
GCACATATTGTTCTAGTGTT+GGG + chr1_1:59012482-59012501 None:intergenic 35.0%
AGCACATATTGTTCTAGTGT+TGG + chr1_1:59012483-59012502 None:intergenic 35.0%
CCACATATTGTTCTAATGTC+GGG + chr1_1:59012572-59012591 None:intergenic 35.0%
ACTGACAAAGAATCTGATCA+AGG - chr1_1:59012738-59012757 Msa0032090:intron 35.0%
!! TGATATTGATAGTGTTGTGG+AGG - chr1_1:59012770-59012789 Msa0032090:intron 35.0%
TTGTCAAAATCATCGTCAGA+AGG + chr1_1:59012804-59012823 None:intergenic 35.0%
!! TTCTGACGATGATTTTGACA+AGG - chr1_1:59012803-59012822 Msa0032090:intron 35.0%
! GTTCTTTTCTTCAGAAGACA+CGG + chr1_1:59012904-59012923 None:intergenic 35.0%
AAAGAACAAGCCAAAATCCA+AGG - chr1_1:59012917-59012936 Msa0032090:CDS 35.0%
CAAATCAACTTCTGTTTCCT+TGG + chr1_1:59013018-59013037 None:intergenic 35.0%
TATGGTAGCTGATATGCAAT+AGG - chr1_1:59013482-59013501 Msa0032090:intron 35.0%
!! TTTGCGTTTTGACATATCAG+TGG + chr1_1:59013589-59013608 None:intergenic 35.0%
ATAACTTTACCACCCAAGTA+TGG + chr1_1:59013732-59013751 None:intergenic 35.0%
AGATCACTACAATCAGTTAC+AGG + chr1_1:59013782-59013801 None:intergenic 35.0%
CCAAGCAAATACCTGTAATT+CGG - chr1_1:59013973-59013992 Msa0032090:intron 35.0%
!! ATTTTGAAAGATGGCAGGAA+AGG - chr1_1:59014109-59014128 Msa0032090:CDS 35.0%
!! TTGGAAGCGTTCAATTTATG+GGG + chr1_1:59014321-59014340 None:intergenic 35.0%
ATTGCTAGCATTTCTATGTG+CGG - chr1_1:59014396-59014415 Msa0032090:CDS 35.0%
CGTTACGAAGTTTCAATTTC+TGG + chr1_1:59014522-59014541 None:intergenic 35.0%
AAATGATAAACCCGACAATG+CGG - chr1_1:59014594-59014613 Msa0032090:intron 35.0%
CCAGATTCAAATAGTGAACA+CGG - chr1_1:59014688-59014707 Msa0032090:intron 35.0%
GCAAATCCAAAAGACAGAAA+GGG - chr1_1:59014746-59014765 Msa0032090:intron 35.0%
CAAATCCAAAAGACAGAAAG+GGG - chr1_1:59014747-59014766 Msa0032090:intron 35.0%
ACTTCGGTATTTGTACTCTT+GGG + chr1_1:59014775-59014794 None:intergenic 35.0%
TTCTTTCGATGAGATCACTT+CGG + chr1_1:59014791-59014810 None:intergenic 35.0%
AGAAAGTCCAAAAGCTTCTT+CGG - chr1_1:59014807-59014826 Msa0032090:intron 35.0%
GTAATTTAGCACCATGATTC+TGG + chr1_1:59014861-59014880 None:intergenic 35.0%
! CATGGTGCTAAATTACATGA+AGG - chr1_1:59014865-59014884 Msa0032090:intron 35.0%
AAGAAAGAAGACGCAGTATT+TGG - chr1_1:59014928-59014947 Msa0032090:intron 35.0%
! GGCATGAAGTTGATTAAATG+TGG - chr1_1:59015422-59015441 Msa0032090:intron 35.0%
TCCGCATTATTATGCAACAA+TGG - chr1_1:59015484-59015503 Msa0032090:intron 35.0%
TCATGGTAACTAACATAGCA+CGG - chr1_1:59015572-59015591 Msa0032090:CDS 35.0%
AAAAACCCTCATTATGGACC+GGG + chr1_1:59006726-59006745 None:intergenic 40.0%
GAAAAACCCTCATTATGGAC+CGG + chr1_1:59006727-59006746 None:intergenic 40.0%
ATGAAGGAAAATAGCGACGA+CGG - chr1_1:59006840-59006859 Msa0032090:three_prime_UTR 40.0%
TAACGGCGGACATTGTTTAA+CGG + chr1_1:59006868-59006887 None:intergenic 40.0%
!! GAAACAAAGAGTGTTAACGG+CGG + chr1_1:59006882-59006901 None:intergenic 40.0%
CTGAGAGTTAGTGAAGGAAT+AGG + chr1_1:59006913-59006932 None:intergenic 40.0%
CTATTCCTTCACTAACTCTC+AGG - chr1_1:59006911-59006930 Msa0032090:intron 40.0%
! TCTACACAACATCGTGGTTT+TGG - chr1_1:59007166-59007185 Msa0032090:intron 40.0%
TACTTACAAAGATGGGGTTG+TGG + chr1_1:59007611-59007630 None:intergenic 40.0%
TATTGATATCATGAGGACCG+AGG - chr1_1:59007749-59007768 Msa0032090:CDS 40.0%
GTGCTTGCTTCAATAGTATC+CGG - chr1_1:59007817-59007836 Msa0032090:CDS 40.0%
TGCTTGCTTCAATAGTATCC+GGG - chr1_1:59007818-59007837 Msa0032090:CDS 40.0%
! CGTGCTTCACTACAATTTTC+CGG + chr1_1:59008074-59008093 None:intergenic 40.0%
! TTCGATCTTCGATTTTCACG+GGG + chr1_1:59008111-59008130 None:intergenic 40.0%
AGCATCAATCAACCTTGATC+CGG + chr1_1:59008135-59008154 None:intergenic 40.0%
GTGAGAAAAGAAAACAAGGG+AGG + chr1_1:59008233-59008252 None:intergenic 40.0%
!! GATAAAGACAGCGGATTATC+TGG - chr1_1:59008313-59008332 Msa0032090:CDS 40.0%
!!! GGTTCTTTTGGAACTGAAAC+AGG + chr1_1:59008349-59008368 None:intergenic 40.0%
!!! CCTTCTTCCTTTGGTTCTTT+TGG + chr1_1:59008361-59008380 None:intergenic 40.0%
CCAAAAGAACCAAAGGAAGA+AGG - chr1_1:59008358-59008377 Msa0032090:intron 40.0%
! ACAGGCTTCCTTGAGTTTTT+CGG + chr1_1:59008499-59008518 None:intergenic 40.0%
TTGTAATGACACAGCAGATG+AGG - chr1_1:59008540-59008559 Msa0032090:CDS 40.0%
TGTAATGACACAGCAGATGA+GGG - chr1_1:59008541-59008560 Msa0032090:CDS 40.0%
CTATTAAGCATCCCCTTTCA+AGG - chr1_1:59008872-59008891 Msa0032090:CDS 40.0%
GCTGAAGATCATTCCTTGAA+AGG + chr1_1:59008888-59008907 None:intergenic 40.0%
CAACACGAAGTGCAAAACAA+TGG + chr1_1:59009086-59009105 None:intergenic 40.0%
!!! TTGTGCTGTTTTATGTGCTC+TGG - chr1_1:59009160-59009179 Msa0032090:CDS 40.0%
GTGATAACTGCTAGCTGATT+AGG - chr1_1:59009652-59009671 Msa0032090:CDS 40.0%
AAGCTTCCATTTCTGAGTCT+TGG + chr1_1:59010275-59010294 None:intergenic 40.0%
TGTCAGAAACCTTCCTTTCA+AGG - chr1_1:59010297-59010316 Msa0032090:intron 40.0%
TCAACAGATCGAACCTTGAA+AGG + chr1_1:59010313-59010332 None:intergenic 40.0%
! ATTTTCAGCATCTTGCTTGC+AGG + chr1_1:59010622-59010641 None:intergenic 40.0%
! TCGTCTCATAGCTGTTGATT+GGG - chr1_1:59010769-59010788 Msa0032090:intron 40.0%
!! AAATTACCTTCCTCTGAAGC+AGG + chr1_1:59010836-59010855 None:intergenic 40.0%
!! TAAGAGCATCCACATTGGTA+GGG - chr1_1:59011131-59011150 Msa0032090:intron 40.0%
TGTTAAAGACCCTACCAATG+TGG + chr1_1:59011143-59011162 None:intergenic 40.0%
! TTTAAGACCCGGTACCTAAT+AGG - chr1_1:59011163-59011182 Msa0032090:intron 40.0%
CTAATAGGTACCCTCAATGT+GGG - chr1_1:59011178-59011197 Msa0032090:intron 40.0%
TTAAGACCCCCAATCTTAAG+TGG - chr1_1:59011239-59011258 Msa0032090:intron 40.0%
TCGTAGTCCACTTAAGATTG+GGG + chr1_1:59011249-59011268 None:intergenic 40.0%
GTCGTAGTCCACTTAAGATT+GGG + chr1_1:59011250-59011269 None:intergenic 40.0%
! ATGCATTGGCATGCGTAATA+AGG + chr1_1:59011436-59011455 None:intergenic 40.0%
GGCACAATACATCATGAAGA+AGG - chr1_1:59012063-59012082 Msa0032090:intron 40.0%
AACAAGCAATAGTTGCCCTT+TGG + chr1_1:59012358-59012377 None:intergenic 40.0%
CAGTATGTACACATGTTCCT+GGG - chr1_1:59012406-59012425 Msa0032090:intron 40.0%
CCCGACATTAGAACAATATG+TGG - chr1_1:59012569-59012588 Msa0032090:intron 40.0%
CAAAAGGTGACAGATGAAGA+TGG - chr1_1:59012684-59012703 Msa0032090:intron 40.0%
AGATGGTAGTACTACTACTG+AGG - chr1_1:59012701-59012720 Msa0032090:intron 40.0%
AACATCTAAAGAGTCCGACA+AGG - chr1_1:59012965-59012984 Msa0032090:CDS 40.0%
TTCTAAGCCTGAAACTTCCA+AGG - chr1_1:59012998-59013017 Msa0032090:intron 40.0%
TCTGTTTCCTTGGAAGTTTC+AGG + chr1_1:59013008-59013027 None:intergenic 40.0%
ATACCGAAGAAGTGAAGCAA+CGG - chr1_1:59013078-59013097 Msa0032090:intron 40.0%
AAACCGTTGCTTCACTTCTT+CGG + chr1_1:59013084-59013103 None:intergenic 40.0%
! AAGCAACGGTTTTCTGCATT+TGG - chr1_1:59013092-59013111 Msa0032090:intron 40.0%
ACTCCTCTATTACTCAATGC+AGG - chr1_1:59013212-59013231 Msa0032090:intron 40.0%
!!! TGGGATGGGTATTTTGGTAA+GGG - chr1_1:59013315-59013334 Msa0032090:intron 40.0%
!! AAAGGCTCTGGACAAGAAAT+CGG - chr1_1:59013357-59013376 Msa0032090:intron 40.0%
TAGGAGGGACTTATTCTTGA+CGG - chr1_1:59013537-59013556 Msa0032090:CDS 40.0%
TTTGATCTTCCATACTTGGG+TGG - chr1_1:59013720-59013739 Msa0032090:intron 40.0%
CCGAATTACAGGTATTTGCT+TGG + chr1_1:59013976-59013995 None:intergenic 40.0%
!! ATTCGGCAGGTTGGTTAAAT+AGG - chr1_1:59013990-59014009 Msa0032090:intron 40.0%
ATTCAAGAAAAGCGACTCCA+CGG + chr1_1:59014162-59014181 None:intergenic 40.0%
! GGGTGTAATTGTTTGTTACC+AGG + chr1_1:59014235-59014254 None:intergenic 40.0%
TCATTGACCACAGAAACCTT+TGG - chr1_1:59014454-59014473 Msa0032090:intron 40.0%
AAACCTTTGGTCCTGAACAT+CGG - chr1_1:59014467-59014486 Msa0032090:intron 40.0%
TCAAGAGCAAACTCCACAAT+TGG + chr1_1:59014493-59014512 None:intergenic 40.0%
AAAAGCTACAGTATCAGCAG+CGG - chr1_1:59014542-59014561 Msa0032090:intron 40.0%
AATGATAAACCCGACAATGC+GGG - chr1_1:59014595-59014614 Msa0032090:intron 40.0%
TGACAAACCAGCAAAAGACT+TGG - chr1_1:59014663-59014682 Msa0032090:intron 40.0%
CCGTGTTCACTATTTGAATC+TGG + chr1_1:59014691-59014710 None:intergenic 40.0%
GATTCAAATAGTGAACACGG+TGG - chr1_1:59014691-59014710 Msa0032090:intron 40.0%
! CCTTGAGGAGATTTTCCATT+TGG + chr1_1:59014724-59014743 None:intergenic 40.0%
CCAAATGGAAAATCTCCTCA+AGG - chr1_1:59014721-59014740 Msa0032090:intron 40.0%
AATGGAAAATCTCCTCAAGG+AGG - chr1_1:59014724-59014743 Msa0032090:intron 40.0%
GGCAAATCCAAAAGACAGAA+AGG - chr1_1:59014745-59014764 Msa0032090:intron 40.0%
CTTCGGTATTTGTACTCTTG+GGG + chr1_1:59014774-59014793 None:intergenic 40.0%
CACTTCGGTATTTGTACTCT+TGG + chr1_1:59014776-59014795 None:intergenic 40.0%
! TTCCTTTCCGAAGAAGCTTT+TGG + chr1_1:59014817-59014836 None:intergenic 40.0%
AAGACGCAGTATTTGGAAAG+AGG - chr1_1:59014935-59014954 Msa0032090:intron 40.0%
ATGCATAACCAAGAACAAGC+AGG - chr1_1:59014961-59014980 Msa0032090:intron 40.0%
TGCATAACCAAGAACAAGCA+GGG - chr1_1:59014962-59014981 Msa0032090:intron 40.0%
! GGGAAAAGGTTTCTAGGAAA+AGG - chr1_1:59014983-59015002 Msa0032090:intron 40.0%
GAACAAAGATTCAGTAGGGA+AGG - chr1_1:59015014-59015033 Msa0032090:intron 40.0%
TAGATCCAAGTTCTCACACA+AGG - chr1_1:59015074-59015093 Msa0032090:intron 40.0%
AGATCCAAGTTCTCACACAA+GGG - chr1_1:59015075-59015094 Msa0032090:intron 40.0%
AAGGGTTCTCAAGGAAATGA+CGG - chr1_1:59015093-59015112 Msa0032090:intron 40.0%
GATGAGGCTCAAAAGAAGTA+GGG + chr1_1:59015205-59015224 None:intergenic 40.0%
AGATGAGGCTCAAAAGAAGT+AGG + chr1_1:59015206-59015225 None:intergenic 40.0%
TGATTAAATGTGGTTCGCAG+AGG - chr1_1:59015432-59015451 Msa0032090:intron 40.0%
GAGTACCTGAGAGTTAGTGA+AGG + chr1_1:59006919-59006938 None:intergenic 45.0%
! ACCTGTTAGACGCTGTTTCA+TGG - chr1_1:59007052-59007071 Msa0032090:intron 45.0%
ACCATGAAACAGCGTCTAAC+AGG + chr1_1:59007056-59007075 None:intergenic 45.0%
TATGTTCACTCTGCGTGTTG+TGG - chr1_1:59007850-59007869 Msa0032090:CDS 45.0%
CTGCGTGTTGTGGTAATTTG+TGG - chr1_1:59007860-59007879 Msa0032090:CDS 45.0%
CAAGCCATTGAGCTGAAGAA+CGG - chr1_1:59008033-59008052 Msa0032090:intron 45.0%
TGAACCGTTCTTCAGCTCAA+TGG + chr1_1:59008040-59008059 None:intergenic 45.0%
TGAGCTGAAGAACGGTTCAT+TGG - chr1_1:59008041-59008060 Msa0032090:intron 45.0%
CTGAAGAACGGTTCATTGGT+TGG - chr1_1:59008045-59008064 Msa0032090:intron 45.0%
GATGCAATAGAGGGCAATGA+AGG - chr1_1:59008265-59008284 Msa0032090:CDS 45.0%
CAATCGCAACCTTCTTCCTT+TGG + chr1_1:59008370-59008389 None:intergenic 45.0%
GAAAAACTCAAGGAAGCCTG+TGG - chr1_1:59008498-59008517 Msa0032090:CDS 45.0%
GTAATGACACAGCAGATGAG+GGG - chr1_1:59008542-59008561 Msa0032090:CDS 45.0%
TAATGACACAGCAGATGAGG+GGG - chr1_1:59008543-59008562 Msa0032090:CDS 45.0%
TGGTCTCGTGAATTCTGCTA+TGG - chr1_1:59008804-59008823 Msa0032090:intron 45.0%
AGGAATGATCTTCAGCAGCA+TGG - chr1_1:59008892-59008911 Msa0032090:intron 45.0%
! CAATGTTGCAACAGAAGCAC+GGG + chr1_1:59009508-59009527 None:intergenic 45.0%
GCAATGTTGCAACAGAAGCA+CGG + chr1_1:59009509-59009528 None:intergenic 45.0%
CTCGTCATAGAACACATCAG+AGG - chr1_1:59009590-59009609 Msa0032090:CDS 45.0%
! TATGCGTCTAGAGCCTTGAA+AGG - chr1_1:59009899-59009918 Msa0032090:intron 45.0%
! ATGCGTCTAGAGCCTTGAAA+GGG - chr1_1:59009900-59009919 Msa0032090:intron 45.0%
!! TTTGTTGTTGTATGTGGGCC+AGG - chr1_1:59010246-59010265 Msa0032090:intron 45.0%
! TTGTTGTTGTATGTGGGCCA+GGG - chr1_1:59010247-59010266 Msa0032090:intron 45.0%
CAGATCGAACCTTGAAAGGA+AGG + chr1_1:59010309-59010328 None:intergenic 45.0%
! AAGGGACGCATTTTCATCTG+CGG - chr1_1:59010421-59010440 Msa0032090:intron 45.0%
AAGACTGCACACAGGAAATG+AGG + chr1_1:59010571-59010590 None:intergenic 45.0%
TCCTGTGTGCAGTCTTTCAA+AGG - chr1_1:59010575-59010594 Msa0032090:intron 45.0%
CCTGTGTGCAGTCTTTCAAA+GGG - chr1_1:59010576-59010595 Msa0032090:intron 45.0%
GAATCGCCTGAAACAGAAAC+AGG + chr1_1:59010721-59010740 None:intergenic 45.0%
CAGGCGATTCGAAAACTCAA+TGG - chr1_1:59010731-59010750 Msa0032090:intron 45.0%
GTCGTCTCATAGCTGTTGAT+TGG - chr1_1:59010768-59010787 Msa0032090:intron 45.0%
!! GAAGGTAAGAGCATCCACAT+TGG - chr1_1:59011126-59011145 Msa0032090:intron 45.0%
!! GTAAGAGCATCCACATTGGT+AGG - chr1_1:59011130-59011149 Msa0032090:intron 45.0%
!! TGAGGGTACCTATTAGGTAC+CGG + chr1_1:59011174-59011193 None:intergenic 45.0%
!! CCACATTGAGGGTACCTATT+AGG + chr1_1:59011180-59011199 None:intergenic 45.0%
CCTAATAGGTACCCTCAATG+TGG - chr1_1:59011177-59011196 Msa0032090:intron 45.0%
TTTGGGGGTCTCTTAAGACT+CGG - chr1_1:59011208-59011227 Msa0032090:intron 45.0%
CGTAGTCCACTTAAGATTGG+GGG + chr1_1:59011248-59011267 None:intergenic 45.0%
GGTCGTAGTCCACTTAAGAT+TGG + chr1_1:59011251-59011270 None:intergenic 45.0%
ATAGAGGATCTCCATTGGAG+TGG - chr1_1:59011359-59011378 Msa0032090:intron 45.0%
TAGGTACTCAACCACTCCAA+TGG + chr1_1:59011373-59011392 None:intergenic 45.0%
GGAGTGGTTGAGTACCTATT+AGG - chr1_1:59011375-59011394 Msa0032090:intron 45.0%
GTCAAGTATTATGGGACGGA+GGG + chr1_1:59011405-59011424 None:intergenic 45.0%
TGTCAAGTATTATGGGACGG+AGG + chr1_1:59011406-59011425 None:intergenic 45.0%
! GGTCTTAAATGGGTTCCACA+TGG + chr1_1:59011696-59011715 None:intergenic 45.0%
AATGGAGACCCTCACATTTG+AGG + chr1_1:59011717-59011736 None:intergenic 45.0%
AAATGTGAGGGTCTCCATTG+TGG - chr1_1:59011718-59011737 Msa0032090:intron 45.0%
! GTCTCTTAGAGCATCCACAA+TGG + chr1_1:59011735-59011754 None:intergenic 45.0%
GGTGTCTGATAAGTATCCTG+TGG - chr1_1:59012150-59012169 Msa0032090:CDS 45.0%
CTTCAGAAATGGACAACCAC+AGG + chr1_1:59012169-59012188 None:intergenic 45.0%
GCAGTATGTACACATGTTCC+TGG - chr1_1:59012405-59012424 Msa0032090:intron 45.0%
TACAGATTCGTCTTTGGCAG+AGG + chr1_1:59012871-59012890 None:intergenic 45.0%
TGCACCCTTAACAGTTTCCT+TGG + chr1_1:59012937-59012956 None:intergenic 45.0%
CTAGGACATACTTGGTCACT+TGG + chr1_1:59013148-59013167 None:intergenic 45.0%
ACGCCTGCATTGAGTAATAG+AGG + chr1_1:59013218-59013237 None:intergenic 45.0%
TTAAGAAAACCAGTCCCTCG+TGG + chr1_1:59013241-59013260 None:intergenic 45.0%
TCAACTGCCAATACTGCTTC+TGG - chr1_1:59013295-59013314 Msa0032090:intron 45.0%
CAACTGCCAATACTGCTTCT+GGG - chr1_1:59013296-59013315 Msa0032090:intron 45.0%
!!! TGCTTCTGGGATGGGTATTT+TGG - chr1_1:59013309-59013328 Msa0032090:intron 45.0%
!!! CTGGGATGGGTATTTTGGTA+AGG - chr1_1:59013314-59013333 Msa0032090:intron 45.0%
!!! GGGATGGGTATTTTGGTAAG+GGG - chr1_1:59013316-59013335 Msa0032090:intron 45.0%
GGTAAGGGGTAGACCATTAA+AGG - chr1_1:59013330-59013349 Msa0032090:intron 45.0%
! CAAGAAATCGGCTCATGACA+AGG - chr1_1:59013369-59013388 Msa0032090:intron 45.0%
AGACCACCGCAATCTTTACT+TGG - chr1_1:59013420-59013439 Msa0032090:intron 45.0%
CCTTCGCCAAGTAAAGATTG+CGG + chr1_1:59013429-59013448 None:intergenic 45.0%
GCAAATACCTGTAATTCGGC+AGG - chr1_1:59013977-59013996 Msa0032090:intron 45.0%
ATACCTGTAATTCGGCAGGT+TGG - chr1_1:59013981-59014000 Msa0032090:intron 45.0%
TAACCAACCTGCCGAATTAC+AGG + chr1_1:59013987-59014006 None:intergenic 45.0%
GAAAGATGGCAGGAAAGGAA+AGG - chr1_1:59014114-59014133 Msa0032090:CDS 45.0%
TTCAAGAAAAGCGACTCCAC+GGG + chr1_1:59014161-59014180 None:intergenic 45.0%
TTCAGGACCAAAGGTTTCTG+TGG + chr1_1:59014464-59014483 None:intergenic 45.0%
AAAGCTACAGTATCAGCAGC+GGG - chr1_1:59014543-59014562 Msa0032090:intron 45.0%
TTTCTGCTGTTGCCATTGTG+AGG + chr1_1:59014571-59014590 None:intergenic 45.0%
! CTTTTGGATTTGCCTCCTTG+AGG + chr1_1:59014739-59014758 None:intergenic 45.0%
GTCCAAAAGCTTCTTCGGAA+AGG - chr1_1:59014812-59014831 Msa0032090:intron 45.0%
AACCAAGATGGCCAGAATCA+TGG - chr1_1:59014847-59014866 Msa0032090:intron 45.0%
GCATAACCAAGAACAAGCAG+GGG - chr1_1:59014963-59014982 Msa0032090:intron 45.0%
AAGCAGGGGAAAAGGTTTCT+AGG - chr1_1:59014977-59014996 Msa0032090:intron 45.0%
AGAACCCTTGTGTGAGAACT+TGG + chr1_1:59015082-59015101 None:intergenic 45.0%
TTCTCACACAAGGGTTCTCA+AGG - chr1_1:59015084-59015103 Msa0032090:intron 45.0%
!! TTAAAAAAAAAAATATTTCA+TGG + chr1_1:59008625-59008644 None:intergenic 5.0%
!!! TTTTAATTTTTTTTAATGTT+TGG - chr1_1:59008639-59008658 Msa0032090:intron 5.0%
!!! TTTAATTTTTTTTAATGTTT+GGG - chr1_1:59008640-59008659 Msa0032090:intron 5.0%
!! TGTTTAATTATAAAATAAAA+AGG + chr1_1:59009226-59009245 None:intergenic 5.0%
!!! TTGTTTATATTAAATTTTAA+TGG + chr1_1:59015617-59015636 None:intergenic 5.0%
CATCATCATCATCATCGGCG+AGG - chr1_1:59006794-59006813 Msa0032090:three_prime_UTR 50.0%
TCAGGGTCTACACAACATCG+TGG - chr1_1:59007160-59007179 Msa0032090:intron 50.0%
GGGATGCTCGTGTTAAACAG+CGG + chr1_1:59007371-59007390 None:intergenic 50.0%
TGATATCATGAGGACCGAGG+AGG - chr1_1:59007752-59007771 Msa0032090:CDS 50.0%
GATATCATGAGGACCGAGGA+GGG - chr1_1:59007753-59007772 Msa0032090:CDS 50.0%
CGTTCTTCAGCTCAATGGCT+TGG + chr1_1:59008035-59008054 None:intergenic 50.0%
!! ACGGTTCATTGGTTGGTGAC+CGG - chr1_1:59008052-59008071 Msa0032090:intron 50.0%
! GATCTTCGATTTTCACGGGG+AGG + chr1_1:59008108-59008127 None:intergenic 50.0%
CGAAGATCGAAACCGGATCA+AGG - chr1_1:59008120-59008139 Msa0032090:intron 50.0%
AATGACACAGCAGATGAGGG+GGG - chr1_1:59008544-59008563 Msa0032090:CDS 50.0%
!! ACACACAGTGCCGATTTCTC+TGG + chr1_1:59008851-59008870 None:intergenic 50.0%
CTTCGTGTTGAGCCATCTCA+TGG - chr1_1:59009096-59009115 Msa0032090:CDS 50.0%
AGATAGGAGGGGGAACTGTT+TGG - chr1_1:59009538-59009557 Msa0032090:CDS 50.0%
GATAGGAGGGGGAACTGTTT+GGG - chr1_1:59009539-59009558 Msa0032090:CDS 50.0%
ACTTTACCTCCCCACCAAGT+TGG + chr1_1:59009569-59009588 None:intergenic 50.0%
ATTTCTGAGTCTTGGCTCCC+TGG + chr1_1:59010267-59010286 None:intergenic 50.0%
AGGGAGCCAAGACTCAGAAA+TGG - chr1_1:59010266-59010285 Msa0032090:intron 50.0%
! AGGGACGCATTTTCATCTGC+GGG - chr1_1:59010422-59010441 Msa0032090:intron 50.0%
TTTCATCTGCGGGGACTGTA+TGG - chr1_1:59010432-59010451 Msa0032090:intron 50.0%
TTCATCTGCGGGGACTGTAT+GGG - chr1_1:59010433-59010452 Msa0032090:intron 50.0%
ATTCCACAGAAGTCCGACAC+AGG - chr1_1:59010464-59010483 Msa0032090:intron 50.0%
TTCCACAGAAGTCCGACACA+GGG - chr1_1:59010465-59010484 Msa0032090:intron 50.0%
! CCCTTTGAAAGACTGCACAC+AGG + chr1_1:59010579-59010598 None:intergenic 50.0%
!! CTCTGAAGCAGGAGCATCAT+TGG + chr1_1:59010825-59010844 None:intergenic 50.0%
CAATGATGCTCCTGCTTCAG+AGG - chr1_1:59010823-59010842 Msa0032090:intron 50.0%
!! GAGGGTACCTATTAGGTACC+GGG + chr1_1:59011173-59011192 None:intergenic 50.0%
TTGGGGGTCTCTTAAGACTC+GGG - chr1_1:59011209-59011228 Msa0032090:intron 50.0%
GTCGTCTATTGCGAGACAGA+GGG - chr1_1:59011633-59011652 Msa0032090:CDS 50.0%
TAACAGTGACCTCACCACGT+CGG - chr1_1:59011950-59011969 Msa0032090:intron 50.0%
!!! ACTTTTTGGCTGTTCCGACG+TGG + chr1_1:59011967-59011986 None:intergenic 50.0%
GAGGTCACTGTTCTGGTGAA+GGG + chr1_1:59012092-59012111 None:intergenic 50.0%
TGAGGTCACTGTTCTGGTGA+AGG + chr1_1:59012093-59012112 None:intergenic 50.0%
!!! ACTTTTTGGCTGTTCCGACG+TGG + chr1_1:59011967-59011986 None:intergenic 50.0%
!! GGTTGTCCATTTCTGAAGCG+TGG - chr1_1:59012171-59012190 Msa0032090:intron 50.0%
CCAGTGTCTTATACTCCTCC+CGG + chr1_1:59012269-59012288 None:intergenic 50.0%
! TTGGTCACTTGGTGGAGAAC+AGG + chr1_1:59013137-59013156 None:intergenic 50.0%
GGACATACTTGGTCACTTGG+TGG + chr1_1:59013145-59013164 None:intergenic 50.0%
TGCATTATCAGCTGCTTCCG+CGG + chr1_1:59013272-59013291 None:intergenic 50.0%
! TGCCAATACTGCTTCTGGGA+TGG - chr1_1:59013300-59013319 Msa0032090:intron 50.0%
!! GCCAATACTGCTTCTGGGAT+GGG - chr1_1:59013301-59013320 Msa0032090:intron 50.0%
ACCCATCCCAGAAGCAGTAT+TGG + chr1_1:59013305-59013324 None:intergenic 50.0%
! ATCGGCTCATGACAAGGAAC+AGG - chr1_1:59013375-59013394 Msa0032090:intron 50.0%
TCGCCAAGTAAAGATTGCGG+TGG + chr1_1:59013426-59013445 None:intergenic 50.0%
CCGCAATCTTTACTTGGCGA+AGG - chr1_1:59013426-59013445 Msa0032090:intron 50.0%
GCATATCAGCTACCATAGCC+TGG + chr1_1:59013479-59013498 None:intergenic 50.0%
ATCAGTGGCTGAAACCCCTT+CGG + chr1_1:59013574-59013593 None:intergenic 50.0%
CAAGAACAGCAGTATTCCCG+TGG - chr1_1:59014142-59014161 Msa0032090:CDS 50.0%
TCCTGAACATCGGCCAATTG+TGG - chr1_1:59014477-59014496 Msa0032090:intron 50.0%
TCCACAATTGGCCGATGTTC+AGG + chr1_1:59014481-59014500 None:intergenic 50.0%
TGCGTAAACTCCCGCATTGT+CGG + chr1_1:59014608-59014627 None:intergenic 50.0%
AATGCGGGAGTTTACGCACA+TGG - chr1_1:59014610-59014629 Msa0032090:intron 50.0%
!! TCTGGTGCCAAGTCTTTTGC+TGG + chr1_1:59014673-59014692 None:intergenic 50.0%
CACCATGATTCTGGCCATCT+TGG + chr1_1:59014852-59014871 None:intergenic 50.0%
! CCTTTTCCCCTGCTTGTTCT+TGG + chr1_1:59014972-59014991 None:intergenic 50.0%
CCAAGAACAAGCAGGGGAAA+AGG - chr1_1:59014969-59014988 Msa0032090:intron 50.0%
ATCATCATCGGCGAGGCGAT+GGG - chr1_1:59006801-59006820 Msa0032090:three_prime_UTR 55.0%
GGCTTGGCGGTGAACATCTT+CGG + chr1_1:59008830-59008849 None:intergenic 55.0%
CACCGCCAAGCCAGAGAAAT+CGG - chr1_1:59008838-59008857 Msa0032090:CDS 55.0%
!! TGCCGATTTCTCTGGCTTGG+CGG + chr1_1:59008843-59008862 None:intergenic 55.0%
!! CAGTGCCGATTTCTCTGGCT+TGG + chr1_1:59008846-59008865 None:intergenic 55.0%
TTCCCAGGTCTGCTGCAAGA+AGG - chr1_1:59009435-59009454 Msa0032090:CDS 55.0%
AGCCTTCTTGCAGCAGACCT+GGG + chr1_1:59009440-59009459 None:intergenic 55.0%
ACTGTTTGGGCACGCCAACT+TGG - chr1_1:59009552-59009571 Msa0032090:CDS 55.0%
TTTGGGCACGCCAACTTGGT+GGG - chr1_1:59009556-59009575 Msa0032090:CDS 55.0%
! GGGACGCATTTTCATCTGCG+GGG - chr1_1:59010423-59010442 Msa0032090:intron 55.0%
TACCCTGTGTCGGACTTCTG+TGG + chr1_1:59010470-59010489 None:intergenic 55.0%
GATGCTCCTGCTTCAGAGGA+AGG - chr1_1:59010827-59010846 Msa0032090:intron 55.0%
TGGGGGTCTCTTAAGACTCG+GGG - chr1_1:59011210-59011229 Msa0032090:intron 55.0%
!! GGACGGAGGGAGTACCTAAT+AGG + chr1_1:59011392-59011411 None:intergenic 55.0%
GGTCGTCTATTGCGAGACAG+AGG - chr1_1:59011632-59011651 Msa0032090:CDS 55.0%
ACGTGGTGAGGTCACTGTTC+TGG + chr1_1:59012099-59012118 None:intergenic 55.0%
GAACAGTGACCTCACCACGT+CGG - chr1_1:59012099-59012118 Msa0032090:intron 55.0%
GCGAGTCCACGCTTCAGAAA+TGG + chr1_1:59012180-59012199 None:intergenic 55.0%
CGTGGACTCGCCTAAATCCA+GGG - chr1_1:59012189-59012208 Msa0032090:intron 55.0%
GCATGGACAGCCCTGGATTT+AGG + chr1_1:59012202-59012221 None:intergenic 55.0%
CTATGATGCATGGACAGCCC+TGG + chr1_1:59012209-59012228 None:intergenic 55.0%
AGGCAGCTAGACTGCACTAC+CGG - chr1_1:59012247-59012266 Msa0032090:intron 55.0%
! CCGGGAGGAGTATAAGACAC+TGG - chr1_1:59012266-59012285 Msa0032090:intron 55.0%
TCCTCTGTACCTCGTGTTCC+AGG - chr1_1:59013458-59013477 Msa0032090:intron 55.0%
GTACCTCGTGTTCCAGGCTA+TGG - chr1_1:59013464-59013483 Msa0032090:intron 55.0%
CTACCATAGCCTGGAACACG+AGG + chr1_1:59013470-59013489 None:intergenic 55.0%
TGGCCGATGTTCAGGACCAA+AGG + chr1_1:59014473-59014492 None:intergenic 55.0%
GCGTAAACTCCCGCATTGTC+GGG + chr1_1:59014607-59014626 None:intergenic 55.0%
! CACGGTGGTAGAGTGCCAAA+TGG - chr1_1:59014706-59014725 Msa0032090:intron 55.0%
! GGGGTCCCCTTTCTGTCTTT+TGG + chr1_1:59014755-59014774 None:intergenic 55.0%
CATCATCATCGGCGAGGCGA+TGG - chr1_1:59006800-59006819 Msa0032090:three_prime_UTR 60.0%
! CGATTTTCACGGGGAGGACG+AGG + chr1_1:59008102-59008121 None:intergenic 60.0%
CAGCCTTCTTGCAGCAGACC+TGG + chr1_1:59009441-59009460 None:intergenic 60.0%
GTTTGGGCACGCCAACTTGG+TGG - chr1_1:59009555-59009574 Msa0032090:CDS 60.0%
! TTGGGCACGCCAACTTGGTG+GGG - chr1_1:59009557-59009576 Msa0032090:CDS 60.0%
ATCTGCGGGGACTGTATGGG+AGG - chr1_1:59010436-59010455 Msa0032090:intron 60.0%
TTGGCTGTTCCGACGTGGTG+AGG + chr1_1:59011962-59011981 None:intergenic 60.0%
TTGGCTGTTCCGACGTGGTG+AGG + chr1_1:59011962-59011981 None:intergenic 60.0%
GCGTGGACTCGCCTAAATCC+AGG - chr1_1:59012188-59012207 Msa0032090:intron 60.0%
GGCAGCTAGACTGCACTACC+GGG - chr1_1:59012248-59012267 Msa0032090:intron 60.0%
AGCTAGACTGCACTACCGGG+AGG - chr1_1:59012251-59012270 Msa0032090:intron 60.0%
ACTCAATGCAGGCGTCCACG+AGG - chr1_1:59013223-59013242 Msa0032090:intron 60.0%
CTCAATGCAGGCGTCCACGA+GGG - chr1_1:59013224-59013243 Msa0032090:intron 60.0%
GCCTGGAACACGAGGTACAG+AGG + chr1_1:59013462-59013481 None:intergenic 60.0%
ACGGAACTCCAGCTGCCGAA+GGG - chr1_1:59013556-59013575 Msa0032090:CDS 60.0%
GACACAGCAGATGAGGGGGG+TGG - chr1_1:59008547-59008566 Msa0032090:CDS 65.0%
GACGGAACTCCAGCTGCCGA+AGG - chr1_1:59013555-59013574 Msa0032090:CDS 65.0%
CGGAACTCCAGCTGCCGAAG+GGG - chr1_1:59013557-59013576 Msa0032090:CDS 65.0%
GCTGAAACCCCTTCGGCAGC+TGG + chr1_1:59013567-59013586 None:intergenic 65.0%
! CAGCAGCGGGCTCCTCACAA+TGG - chr1_1:59014556-59014575 Msa0032090:intron 65.0%
! GGCACGCCAACTTGGTGGGG+AGG - chr1_1:59009560-59009579 Msa0032090:CDS 70.0%
TGCAGGCGTCCACGAGGGAC+TGG - chr1_1:59013229-59013248 Msa0032090:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 59006722 59015726 59006722 ID=Msa0032090;Name=Msa0032090
chr1_1 mRNA 59006722 59015726 59006722 ID=Msa0032090-mRNA-1;Parent=Msa0032090;Name=Msa0032090-mRNA-1;_AED=0.11;_eAED=0.11;_QI=97|1|1|1|0.94|0.89|19|264|964
chr1_1 exon 59006722 59006907 59006722 ID=Msa0032090-mRNA-1:exon:18159;Parent=Msa0032090-mRNA-1
chr1_1 exon 59007209 59007981 59007209 ID=Msa0032090-mRNA-1:exon:18158;Parent=Msa0032090-mRNA-1
chr1_1 exon 59008213 59008345 59008213 ID=Msa0032090-mRNA-1:exon:18157;Parent=Msa0032090-mRNA-1
chr1_1 exon 59008450 59008618 59008450 ID=Msa0032090-mRNA-1:exon:18156;Parent=Msa0032090-mRNA-1
chr1_1 exon 59008838 59008908 59008838 ID=Msa0032090-mRNA-1:exon:18155;Parent=Msa0032090-mRNA-1
chr1_1 exon 59009001 59009214 59009001 ID=Msa0032090-mRNA-1:exon:18154;Parent=Msa0032090-mRNA-1
chr1_1 exon 59009292 59009769 59009292 ID=Msa0032090-mRNA-1:exon:18153;Parent=Msa0032090-mRNA-1
chr1_1 exon 59011600 59011714 59011600 ID=Msa0032090-mRNA-1:exon:18152;Parent=Msa0032090-mRNA-1
chr1_1 exon 59011807 59011861 59011807 ID=Msa0032090-mRNA-1:exon:18151;Parent=Msa0032090-mRNA-1
chr1_1 exon 59011962 59012044 59011962 ID=Msa0032090-mRNA-1:exon:18150;Parent=Msa0032090-mRNA-1
chr1_1 exon 59012130 59012180 59012130 ID=Msa0032090-mRNA-1:exon:18149;Parent=Msa0032090-mRNA-1
chr1_1 exon 59012867 59013006 59012867 ID=Msa0032090-mRNA-1:exon:18148;Parent=Msa0032090-mRNA-1
chr1_1 exon 59013535 59013668 59013535 ID=Msa0032090-mRNA-1:exon:18147;Parent=Msa0032090-mRNA-1
chr1_1 exon 59013864 59013972 59013864 ID=Msa0032090-mRNA-1:exon:18146;Parent=Msa0032090-mRNA-1
chr1_1 exon 59014069 59014173 59014069 ID=Msa0032090-mRNA-1:exon:18145;Parent=Msa0032090-mRNA-1
chr1_1 exon 59014307 59014437 59014307 ID=Msa0032090-mRNA-1:exon:18144;Parent=Msa0032090-mRNA-1
chr1_1 exon 59015248 59015284 59015248 ID=Msa0032090-mRNA-1:exon:18143;Parent=Msa0032090-mRNA-1
chr1_1 exon 59015362 59015422 59015362 ID=Msa0032090-mRNA-1:exon:18142;Parent=Msa0032090-mRNA-1
chr1_1 exon 59015516 59015726 59015516 ID=Msa0032090-mRNA-1:exon:18141;Parent=Msa0032090-mRNA-1
chr1_1 five_prime_UTR 59015630 59015726 59015630 ID=Msa0032090-mRNA-1:five_prime_utr;Parent=Msa0032090-mRNA-1
chr1_1 CDS 59015516 59015629 59015516 ID=Msa0032090-mRNA-1:cds;Parent=Msa0032090-mRNA-1
chr1_1 CDS 59015362 59015422 59015362 ID=Msa0032090-mRNA-1:cds;Parent=Msa0032090-mRNA-1
chr1_1 CDS 59015248 59015284 59015248 ID=Msa0032090-mRNA-1:cds;Parent=Msa0032090-mRNA-1
chr1_1 CDS 59014307 59014437 59014307 ID=Msa0032090-mRNA-1:cds;Parent=Msa0032090-mRNA-1
chr1_1 CDS 59014069 59014173 59014069 ID=Msa0032090-mRNA-1:cds;Parent=Msa0032090-mRNA-1
chr1_1 CDS 59013864 59013972 59013864 ID=Msa0032090-mRNA-1:cds;Parent=Msa0032090-mRNA-1
chr1_1 CDS 59013535 59013668 59013535 ID=Msa0032090-mRNA-1:cds;Parent=Msa0032090-mRNA-1
chr1_1 CDS 59012867 59013006 59012867 ID=Msa0032090-mRNA-1:cds;Parent=Msa0032090-mRNA-1
chr1_1 CDS 59012130 59012180 59012130 ID=Msa0032090-mRNA-1:cds;Parent=Msa0032090-mRNA-1
chr1_1 CDS 59011962 59012044 59011962 ID=Msa0032090-mRNA-1:cds;Parent=Msa0032090-mRNA-1
chr1_1 CDS 59011807 59011861 59011807 ID=Msa0032090-mRNA-1:cds;Parent=Msa0032090-mRNA-1
chr1_1 CDS 59011600 59011714 59011600 ID=Msa0032090-mRNA-1:cds;Parent=Msa0032090-mRNA-1
chr1_1 CDS 59009292 59009769 59009292 ID=Msa0032090-mRNA-1:cds;Parent=Msa0032090-mRNA-1
chr1_1 CDS 59009001 59009214 59009001 ID=Msa0032090-mRNA-1:cds;Parent=Msa0032090-mRNA-1
chr1_1 CDS 59008838 59008908 59008838 ID=Msa0032090-mRNA-1:cds;Parent=Msa0032090-mRNA-1
chr1_1 CDS 59008450 59008618 59008450 ID=Msa0032090-mRNA-1:cds;Parent=Msa0032090-mRNA-1
chr1_1 CDS 59008213 59008345 59008213 ID=Msa0032090-mRNA-1:cds;Parent=Msa0032090-mRNA-1
chr1_1 CDS 59007287 59007981 59007287 ID=Msa0032090-mRNA-1:cds;Parent=Msa0032090-mRNA-1
chr1_1 three_prime_UTR 59007209 59007286 59007209 ID=Msa0032090-mRNA-1:three_prime_utr;Parent=Msa0032090-mRNA-1
chr1_1 three_prime_UTR 59006722 59006907 59006722 ID=Msa0032090-mRNA-1:three_prime_utr;Parent=Msa0032090-mRNA-1
Gene Sequence

>Msa0032090

ATGGGCAAGAAAAACAAAGCAATGAAGGAAAATAGCGACGACGGCACCGTTAAACAATGTCCGCCGTTAACACTCTTTGTTTCTAATTTACCCTATTCCTTCACTAACTCTCAGCTTGAACAAACTTTCAGTGAAGTTGGACCTGTTAGACGCTGTTTCATGGTTACACAAAAGGGGTCTACACAACATCGTGGTTTTGGTTATGTTCAATTTGCTGTTGAGAAAGACGCTAACCAAGCCATTGAGCTGAAGAACGGTTCATTGGTTGGTGACCGGAAAATTGTAGTGAAGCACGCAATGCCTCGTCCTCCCCGTGAAAATCGAAGATCGAAACCGGATCAAGAGGGCAATGAAGGCGATCTCACACAATCAAAAAATGATGATAAAGACAGCGGATTATCTGGAGCAGAGAAGCCTGTTTCAGTTCCAAAAGAACCAAAGGAAGAAGAAGTGAAAGTTTTGGATAAACCGAAAAACTCAAGGAAGCCTGTGGAAATAAAAAAAGCAGCACTTTGTAATGACACAGCAGATGAGGGGGGTGGCTCAGAAAAACAGAAGGTTGCTAGAACTGTTATATTTGGTGGTCTCGTGAATTCTGCTATGGCCGAAGATGTTCACCGCCAAGCCAGAGAAATCGGCACTGTGTGTTCTATTAAGCATCCCCTTTCAAGGAATGATCTTCAGCAGCATGGTCTGCTGCAAGAAGGCTGTACTTTCAATGCTTCAGCTGTACTTTATACAAGTGTAAAATCAGCCCGTGCTTCTGTTGCAACATTGCATAAAAAAGAGATAGGAGGGGGAACTGTTTGGGCACGCCAACTTGGTGGGGAGGGAGCCAAGACTCAGAAATGGAAGCTTATTGTCAGAAACCTTCCTTTCAAGGCCAAAGAAAATGAAATAAGGGACGCATTTTCATCTGCGGGGACTGTATGGGAGGTATTCATTCCACAGAAGTCCGACACAGGTCTTTCAAAGGGTTTTGCATTTGTAAAATTCACCTGCAAGCAAGATGCTGAAAATGCGATTCGAAAACTCAATGGATCGAAGTTTGGGAGTCGTCTCATAGCTGTTGATTGGGCTGTTCCAAAAAAGATATTTAGTAGTGATACCAATGATGCTCCTGCTTCAGAGGAAGGACAACAAAAGGTGACAGATGAAGATGGTAGTACTACTACTGAGGATGATCTTGAGAATACTGACAAAGAATCTGATCAAGGAGATGATAGTGATATTGATAGTGTTGTGGAGGAAGATGTTCCTTCTGACGATGATTTTGACAAGGAAGCAGACATTGCAAGAAAAGTTCTTAACAACTTGATTACATCCTCTGCCAAAGACGAATCTGTAAATAACGATTCCGTGTCTTCTGAAGAAAAGAACAAGCCAAAATCCAAGGAAACTGTTAAGGGTGCAGATAGTAAAACATCTAAAGAGTCCGACAAGGTTTCAGATATTTCTAAGCCTGAAACTTCCAAGGAAACAGAAGTTGATTTGCACAGAACAGTTTTTATAACCAATCTTCCCTTTGAATTAGATACCGAAGAAGTGAAGCAACGGTTTTCTGCATTTGGTGAAGTAGAATATTTTGCTCCTGTTCTCCACCAAGTGACCAAGCGTCCACGAGGGACTGGTTTTCTTAAGTTTAAAACCGCGGAAGCAGCTGATAATGCAATTTCAACTGCCAATACTGCTTCTGGGATGGGTATTTTGGTAAGGGGTAGACCATTAAAGGTTTTAAAGGCTCTGGACAAGAAATCGGCTCATGACAAGGAACAGGAGAAAGAAAAAAATGAAGTTCAAGACCACCGCAATCTTTACTTGGCGAAGGAGGGACTTATTCTTGACGGAACTCCAGCTGCCGAAGGGGTTTCAGCCACTGATATGTCAAAACGCAAAAATTTGGAAAGGAAAAAGAAGACGAAGCTTCAATCTCCAAATTTTCATGTTTCAAAAACTAGACTTGTTATCTACAACTTACCAAAGTCAATGACTGAAAAACAACTTAAGACGCTTTGCATTGATTCAGTCATCTCTAGAGCTACCAAGCAAATACCTGTAATTCGGCAGATAAAGATTTTGAAAGATGGCAGGAAAGGAAAGGCTACTCAAGAACAGCAGTATTCCCGTGGAGTCGCTTTTCTTGAATTTTCAGAGCATCAACATGCTCTTGTTGCTTTGAGAGTTCTTAACAATAATCCTGAAACCTTTGGTCCTGAACATCGGCCAATTGTGGAGTTTGCTCTTGATAATATCCAGAAATTGAAACTTCGTAACGAAAAGCTACAGTATCAGCAGCGGGCTCCTCACAATGGCAACAGCAGAAACGAAAATGATAAACCCGACAATGCGGGAGTTTACGCACATGGAACTGACAGAAAACGAAAATCTCAAGAGCATGACAAACCAGCAAAAGACTTGGCACCAGATTCAAATAGTGAACACGGTGGTAGAGTGCCAAATGGAAAATCTCCTCAAGGAGGCAAATCCAAAAGACAGAAAGGGGACCCCAAGAGTACAAATACCGAAGTGATCTCATCGAAAGAAAGTCCAAAAGCTTCTTCGGAAAGGAAGCTAAAAAATAACCAAGATGGCCAGAATCATGGTGCTAAATTACATGAAGGTAAAAATAGTTCCATTGACAGTAATAGGAAAATATCAGGTAAGAAAGAAGACGCAGTATTTGGAAAGAGGAAGATGCATAACCAAGAACAAGCAGGGGAAAAGGTTTCTAGGAAAAGGCCAAAGAAGAACAAAGATTCAGTAGGGAAGGACACAGTAGATAAGCTTGACATGCTTATAGAACAATATAGATCCAAGTTCTCACACAAGGGTTCTCAAGGAAATGACGGCGAGAAAAAACAATCTAAACAGCTTAGGAAATGGTTCCAATCATAA
Protein sequence

>Msa0032090

MGKKNKAMKENSDDGTVKQCPPLTLFVSNLPYSFTNSQLEQTFSEVGPVRRCFMVTQKGSTQHRGFGYVQFAVEKDANQAIELKNGSLVGDRKIVVKHAMPRPPRENRRSKPDQEGNEGDLTQSKNDDKDSGLSGAEKPVSVPKEPKEEEVKVLDKPKNSRKPVEIKKAALCNDTADEGGGSEKQKVARTVIFGGLVNSAMAEDVHRQAREIGTVCSIKHPLSRNDLQQHGLLQEGCTFNASAVLYTSVKSARASVATLHKKEIGGGTVWARQLGGEGAKTQKWKLIVRNLPFKAKENEIRDAFSSAGTVWEVFIPQKSDTGLSKGFAFVKFTCKQDAENAIRKLNGSKFGSRLIAVDWAVPKKIFSSDTNDAPASEEGQQKVTDEDGSTTTEDDLENTDKESDQGDDSDIDSVVEEDVPSDDDFDKEADIARKVLNNLITSSAKDESVNNDSVSSEEKNKPKSKETVKGADSKTSKESDKVSDISKPETSKETEVDLHRTVFITNLPFELDTEEVKQRFSAFGEVEYFAPVLHQVTKRPRGTGFLKFKTAEAADNAISTANTASGMGILVRGRPLKVLKALDKKSAHDKEQEKEKNEVQDHRNLYLAKEGLILDGTPAAEGVSATDMSKRKNLERKKKTKLQSPNFHVSKTRLVIYNLPKSMTEKQLKTLCIDSVISRATKQIPVIRQIKILKDGRKGKATQEQQYSRGVAFLEFSEHQHALVALRVLNNNPETFGPEHRPIVEFALDNIQKLKLRNEKLQYQQRAPHNGNSRNENDKPDNAGVYAHGTDRKRKSQEHDKPAKDLAPDSNSEHGGRVPNGKSPQGGKSKRQKGDPKSTNTEVISSKESPKASSERKLKNNQDGQNHGAKLHEGKNSSIDSNRKISGKKEDAVFGKRKMHNQEQAGEKVSRKRPKKNKDSVGKDTVDKLDMLIEQYRSKFSHKGSQGNDGEKKQSKQLRKWFQS*