AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0032430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032430 MtrunA17_Chr1g0190351 98.133 964 16 2 1 964 33 994 0.0 1930
Msa0032430 MtrunA17_Chr8g0349601 36.842 76 48 0 288 363 203 278 8.59e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032430 AT2G21440.1 47.605 1023 414 20 24 964 21 1003 0.0 807
Msa0032430 AT1G54080.1 27.103 214 127 5 199 400 64 260 6.20e-11 66.2

Find 222 sgRNAs with CRISPR-Local

Find 554 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCTTCCTTTGGTTCTTT+TGG 0.103039 1_1:-59521842 None:intergenic
TCTGTTTCCTTGGAAGTTTC+AGG 0.151548 1_1:-59526495 None:intergenic
TGCTTCTGGGATGGGTATTT+TGG 0.157301 1_1:+59526799 Msa0032430:CDS
CGTTACGAAGTTTCAATTTC+TGG 0.157364 1_1:-59528020 None:intergenic
TTAACAGTTTCCTTGGATTT+TGG 0.171316 1_1:-59526417 None:intergenic
ACTGAATCTTTGTTCTTCTT+TGG 0.190926 1_1:-59528507 None:intergenic
GGGGTCCCCTTTCTGTCTTT+TGG 0.224958 1_1:-59528253 None:intergenic
TCAACTGCCAATACTGCTTC+TGG 0.228699 1_1:+59526785 Msa0032430:CDS
AAGAAAGAAGACGCAGTATT+TGG 0.233382 1_1:+59528429 Msa0032430:CDS
GTAATTTAGCACCATGATTC+TGG 0.234712 1_1:-59528359 None:intergenic
GGTAAGGGGTAGACCATTAA+AGG 0.238442 1_1:+59526820 Msa0032430:CDS
GTTGCTAGAACTGTTATATT+TGG 0.244405 1_1:+59522265 Msa0032430:CDS
AGAGCCTTTAAAACCTTTAA+TGG 0.253378 1_1:-59526833 None:intergenic
GATAAAGACAGCGGATTATC+TGG 0.273260 1_1:+59521797 Msa0032430:CDS
AGGCCAAAGAAAATGAAATA+AGG 0.273524 1_1:+59523886 Msa0032430:intron
ACGCACGCTCAAACCCTTCT+TGG 0.279213 1_1:+59520240 Msa0032430:five_prime_UTR
ACCTGTTAGGCGCTGTTTCA+TGG 0.290840 1_1:+59520553 Msa0032430:CDS
AAACTCAATGGATCGAAGTT+TGG 0.305477 1_1:+59524227 Msa0032430:CDS
TTTCATCTGCGGGGACTGTA+TGG 0.307723 1_1:+59523916 Msa0032430:CDS
CACTTCGGTATTTGTACTCT+TGG 0.308629 1_1:-59528274 None:intergenic
TCCACAATTGGCCGATGTTC+AGG 0.314138 1_1:-59527979 None:intergenic
TTCCTTTCCGAAGAAGCTTT+TGG 0.331812 1_1:-59528315 None:intergenic
TAACCAACCTGCCGAATTAC+AGG 0.333219 1_1:-59527474 None:intergenic
TCTACACAACATCGTGGTTT+TGG 0.333522 1_1:+59520665 Msa0032430:CDS
CAATCACAACCTTCTTCCTT+TGG 0.333819 1_1:-59521851 None:intergenic
ACTTCGGTATTTGTACTCTT+GGG 0.335882 1_1:-59528273 None:intergenic
ATAGTTCCATTGACAGTAAT+AGG 0.336958 1_1:+59528394 Msa0032430:CDS
CACCATGATTCTGGCCATCT+TGG 0.340703 1_1:-59528350 None:intergenic
ACCATGAAACAGCGCCTAAC+AGG 0.342107 1_1:-59520554 None:intergenic
TGTCAGAAACCTTCCTTTCA+AGG 0.342388 1_1:+59523781 Msa0032430:CDS
TTTCATAACAAAATTATGAT+TGG 0.345149 1_1:-59528653 None:intergenic
CAAATCAACTTCTGTTTCCT+TGG 0.354494 1_1:-59526505 None:intergenic
GTCGTCTCATAGCTGTTGAT+TGG 0.358840 1_1:+59524252 Msa0032430:CDS
AACTCAATGGATCGAAGTTT+GGG 0.358983 1_1:+59524228 Msa0032430:CDS
GTTATTTACAGATTCGTCTT+TGG 0.369847 1_1:-59526364 None:intergenic
AAGCAGGGGAAAAGGTTTCT+AGG 0.374787 1_1:+59528478 Msa0032430:CDS
TGCACCCTTAACAGTTTCCT+TGG 0.378021 1_1:-59526424 None:intergenic
CTGTTTCATGGTTACACAAA+AGG 0.380370 1_1:+59520565 Msa0032430:CDS
GACAGTAATAGGAAAATATC+AGG 0.382523 1_1:+59528405 Msa0032430:CDS
CTATTAAGCATCCCCTTTCA+AGG 0.383007 1_1:+59522356 Msa0032430:CDS
GCTGAAACCCCTTCGGCAGC+TGG 0.384100 1_1:-59527054 None:intergenic
CTGAGAGTTAGTGAAGGAAT+AGG 0.388327 1_1:-59520411 None:intergenic
AGAACCCTTGTGTGAGAACT+TGG 0.390972 1_1:-59528580 None:intergenic
CTCTGAAGCAGGAGCATCAT+TGG 0.391724 1_1:-59524306 None:intergenic
AAAATCCAAGGAAACTGTTA+AGG 0.392787 1_1:+59526419 Msa0032430:CDS
AAAGGCTCTGGACAAGAAAT+CGG 0.400061 1_1:+59526847 Msa0032430:CDS
CCGTGTTCACTATTTGAATC+TGG 0.400337 1_1:-59528189 None:intergenic
GCTAGAACTGTTATATTTGG+TGG 0.404207 1_1:+59522268 Msa0032430:CDS
CACCGCCAAGCCAGAGAAAT+CGG 0.405483 1_1:+59522322 Msa0032430:CDS
ATCTAATTCAAAGGGAAGAT+TGG 0.406524 1_1:-59526547 None:intergenic
GAACAAACTTTCAGTGAAGT+TGG 0.409004 1_1:+59520530 Msa0032430:CDS
AAGCTTCCATTTCTGAGTCT+TGG 0.414414 1_1:-59523756 None:intergenic
AGACCACCGCAATCTTTACT+TGG 0.416144 1_1:+59526910 Msa0032430:CDS
TCCTGTGTGCAGTCTTTCAA+AGG 0.416759 1_1:+59524059 Msa0032430:intron
AAACCGTTGCTTCACTTCTT+CGG 0.420518 1_1:-59526571 None:intergenic
TTAGAAACAAAGAGTGTTAA+CGG 0.425518 1_1:-59520383 None:intergenic
TGCGTAAACTCCCGCATTGT+CGG 0.425962 1_1:-59528106 None:intergenic
TGAGCTGAAGAACGGTTCAT+TGG 0.431497 1_1:+59521525 Msa0032430:CDS
GGCCAAAGAAAATGAAATAA+GGG 0.433746 1_1:+59523887 Msa0032430:intron
AGAAAGTCCAAAAGCTTCTT+CGG 0.435552 1_1:+59528308 Msa0032430:CDS
CCAAGCAAATACCTGTAATT+CGG 0.436673 1_1:+59527463 Msa0032430:CDS
TTGGTCACTTGGTGGAGAAC+AGG 0.437156 1_1:-59526624 None:intergenic
CTGAAGATCATTCCTTGAAA+GGG 0.446240 1_1:-59522368 None:intergenic
ACACACAGTGCCGATTTCTC+TGG 0.447857 1_1:-59522332 None:intergenic
TGCCGATTTCTCTGGCTTGG+CGG 0.449281 1_1:-59522324 None:intergenic
CAACTGCCAATACTGCTTCT+GGG 0.451408 1_1:+59526786 Msa0032430:CDS
AAATTTAATATAAACAACTT+AGG 0.453008 1_1:+59529121 Msa0032430:three_prime_UTR
AGAGTTCTTAACAATAATCC+TGG 0.454597 1_1:+59527704 Msa0032430:CDS
AATCTAAACAGCTTAGGAAA+TGG 0.456031 1_1:+59528628 Msa0032430:CDS
TGAGAGTTAGTGAAGGAATA+GGG 0.456317 1_1:-59520410 None:intergenic
CCTGTGTGCAGTCTTTCAAA+GGG 0.458416 1_1:+59524060 Msa0032430:intron
TGAACCGTTCTTCAGCTCAA+TGG 0.460449 1_1:-59521521 None:intergenic
GGCTTGGCGGTGAACATCTT+CGG 0.460580 1_1:-59522311 None:intergenic
CTAGGACATACTTGGTCACT+TGG 0.461965 1_1:-59526635 None:intergenic
GCGTAAACTCCCGCATTGTC+GGG 0.462564 1_1:-59528105 None:intergenic
GCCAATACTGCTTCTGGGAT+GGG 0.465705 1_1:+59526791 Msa0032430:CDS
TCAAGAGCAAACTCCACAAT+TGG 0.466178 1_1:-59527991 None:intergenic
TAACGGCGGACATTGTTTAA+CGG 0.467270 1_1:-59520366 None:intergenic
ATCGGCTCATGACAAGGAAC+AGG 0.468605 1_1:+59526865 Msa0032430:CDS
ACCCATCCCAGAAGCAGTAT+TGG 0.471074 1_1:-59526792 None:intergenic
TTTGGGCACGCCAACTTGGT+GGG 0.473129 1_1:+59523040 Msa0032430:CDS
ACTGTTTGGGCACGCCAACT+TGG 0.473827 1_1:+59523036 Msa0032430:CDS
AAGAAAGAAAGAAGCCAAGA+AGG 0.474242 1_1:-59520254 None:intergenic
CCAAGAACAAGCAGGGGAAA+AGG 0.475052 1_1:+59528470 Msa0032430:CDS
TCAGTGAAGTTGGACCTGTT+AGG 0.475659 1_1:+59520540 Msa0032430:CDS
CACCCACCCGGTCCATAATG+AGG 0.475726 1_1:+59520199 None:intergenic
CGTTCTTCAGCTCAATGGCT+TGG 0.475932 1_1:-59521516 None:intergenic
TAGGAGGGACTTATTCTTGA+CGG 0.477564 1_1:+59527027 Msa0032430:intron
CAGGCGATTCGAAAACTCAA+TGG 0.479592 1_1:+59524215 Msa0032430:intron
AGATGAGGCTCAAAAGAAGT+AGG 0.479760 1_1:-59528704 None:intergenic
TGCAGGCGTCCACGAGGGAC+TGG 0.480915 1_1:+59526719 Msa0032430:intron
GGCAAATCCAAAAGACAGAA+AGG 0.484725 1_1:+59528246 Msa0032430:CDS
TACAGATTCGTCTTTGGCAG+AGG 0.486047 1_1:-59526358 None:intergenic
TGCCAATACTGCTTCTGGGA+TGG 0.486395 1_1:+59526790 Msa0032430:CDS
GTTTGGGCACGCCAACTTGG+TGG 0.487001 1_1:+59523039 Msa0032430:CDS
CGAAGATCGAAACCGGATCA+AGG 0.488053 1_1:+59521604 Msa0032430:CDS
CAGTGCCGATTTCTCTGGCT+TGG 0.490360 1_1:-59522327 None:intergenic
AGCATCAATCAACCTTGATC+CGG 0.491692 1_1:-59521616 None:intergenic
CATCTCTTCATCATCATCAT+CGG 0.495315 1_1:+59520290 Msa0032430:five_prime_UTR
AATGATAAACCCGACAATGC+GGG 0.495453 1_1:+59528096 Msa0032430:CDS
CTATTCCTTCACTAACTCTC+AGG 0.495586 1_1:+59520412 Msa0032430:CDS
GATTTCTTTAGGACAACAAA+AGG 0.498067 1_1:+59526158 Msa0032430:intron
TCGTCTCATAGCTGTTGATT+GGG 0.499678 1_1:+59524253 Msa0032430:CDS
TCATTGACCACAGAAACCTT+TGG 0.500631 1_1:+59527955 Msa0032430:intron
TTCTCACACAAGGGTTCTCA+AGG 0.501028 1_1:+59528585 Msa0032430:CDS
ACGGTTCATTGGTTGGTGAC+CGG 0.501056 1_1:+59521536 Msa0032430:CDS
AGGGAGCCAAGACTCAGAAA+TGG 0.503890 1_1:+59523750 Msa0032430:intron
AGAAATATCTGAAACCTTGT+CGG 0.504739 1_1:-59526469 None:intergenic
CATCATCATCGGCGAGGCGA+TGG 0.506850 1_1:+59520301 Msa0032430:exon
GCAAATCCAAAAGACAGAAA+GGG 0.507205 1_1:+59528247 Msa0032430:CDS
TGAAAATCGAAGATCGAAAC+CGG 0.507609 1_1:+59521597 Msa0032430:CDS
GGGAAAAGGTTTCTAGGAAA+AGG 0.509364 1_1:+59528484 Msa0032430:CDS
TGTTTCATGGTTACACAAAA+GGG 0.510933 1_1:+59520566 Msa0032430:CDS
CCGAATTACAGGTATTTGCT+TGG 0.511846 1_1:-59527463 None:intergenic
TCTTCGGTATCTAATTCAAA+GGG 0.513395 1_1:-59526555 None:intergenic
GCTGAAGATCATTCCTTGAA+AGG 0.515929 1_1:-59522369 None:intergenic
CACGGTGGTAGAGTGCCAAA+TGG 0.516262 1_1:+59528207 Msa0032430:CDS
TCAACAGATCGAACCTTGAA+AGG 0.517773 1_1:-59523794 None:intergenic
TTCATCTGCGGGGACTGTAT+GGG 0.521165 1_1:+59523917 Msa0032430:CDS
AAGACGCAGTATTTGGAAAG+AGG 0.521867 1_1:+59528436 Msa0032430:CDS
ATCAGTGGCTGAAACCCCTT+CGG 0.522666 1_1:-59527061 None:intergenic
TTCTTCGGTATCTAATTCAA+AGG 0.523243 1_1:-59526556 None:intergenic
GACGGAACTCCAGCTGCCGA+AGG 0.523716 1_1:+59527045 Msa0032430:CDS
CAATGATGCTCCTGCTTCAG+AGG 0.523848 1_1:+59524307 Msa0032430:CDS
CAGATCGAACCTTGAAAGGA+AGG 0.524767 1_1:-59523790 None:intergenic
GAAATATTTATAGTTTGGAA+AGG 0.525585 1_1:+59527307 Msa0032430:intron
GAACAAAGATTCAGTAGGGA+AGG 0.527716 1_1:+59528515 Msa0032430:CDS
AACCAAGATGGCCAGAATCA+TGG 0.528146 1_1:+59528348 Msa0032430:CDS
TCCTGAACATCGGCCAATTG+TGG 0.528514 1_1:+59527978 Msa0032430:CDS
AAATCCAAGGAAACTGTTAA+GGG 0.531440 1_1:+59526420 Msa0032430:CDS
CTTCGGTATTTGTACTCTTG+GGG 0.533027 1_1:-59528272 None:intergenic
CCAAAAGAACCAAAGGAAGA+AGG 0.533227 1_1:+59521842 Msa0032430:CDS
AAGAAGAACAAAGATTCAGT+AGG 0.534680 1_1:+59528510 Msa0032430:CDS
GATGCAATAGAGGGCAATGA+AGG 0.535517 1_1:+59521749 Msa0032430:intron
AAATTACCTTCCTCTGAAGC+AGG 0.535871 1_1:-59524317 None:intergenic
TGCATTATCAGCTGCTTCCG+CGG 0.535875 1_1:-59526759 None:intergenic
ATGCATAACCAAGAACAAGC+AGG 0.537887 1_1:+59528462 Msa0032430:CDS
TTCCCAGGTCTGCTGCAAGA+AGG 0.538150 1_1:+59522919 Msa0032430:intron
GCAAATACCTGTAATTCGGC+AGG 0.538494 1_1:+59527467 Msa0032430:CDS
TTCTAAGCCTGAAACTTCCA+AGG 0.542108 1_1:+59526488 Msa0032430:CDS
GATGCTCCTGCTTCAGAGGA+AGG 0.546927 1_1:+59524311 Msa0032430:CDS
ACTGACAAAGAATCTGATCA+AGG 0.547224 1_1:+59526228 Msa0032430:CDS
TGGCCGATGTTCAGGACCAA+AGG 0.547311 1_1:-59527971 None:intergenic
GGACATACTTGGTCACTTGG+TGG 0.548184 1_1:-59526632 None:intergenic
AGAAAGAAAGAAGCCAAGAA+GGG 0.552149 1_1:-59520253 None:intergenic
AAAGAACAAGCCAAAATCCA+AGG 0.552898 1_1:+59526407 Msa0032430:CDS
ACGGAACTCCAGCTGCCGAA+GGG 0.553197 1_1:+59527046 Msa0032430:CDS
CAATGTTGCAACAGAAGCAC+GGG 0.556088 1_1:-59522989 None:intergenic
TTGGGCACGCCAACTTGGTG+GGG 0.556141 1_1:+59523041 Msa0032430:CDS
TGGTCTCGTGAATTCTGCTA+TGG 0.558745 1_1:+59522288 Msa0032430:CDS
GGCACGCCAACTTGGTGGGG+AGG 0.559247 1_1:+59523044 Msa0032430:CDS
CATGGTGCTAAATTACATGA+AGG 0.559370 1_1:+59528366 Msa0032430:CDS
TTCAGTTCCAAAAGAACCAA+AGG 0.560178 1_1:+59521835 Msa0032430:CDS
ATCATCATCGGCGAGGCGAT+GGG 0.563341 1_1:+59520302 Msa0032430:exon
ATTCAAGAAAAGCGACTCCA+CGG 0.563574 1_1:-59527649 None:intergenic
CTGAAGAACGGTTCATTGGT+TGG 0.563589 1_1:+59521529 Msa0032430:CDS
CAAGAAATCGGCTCATGACA+AGG 0.564214 1_1:+59526859 Msa0032430:CDS
ACTTTACCTCCCCACCAAGT+TGG 0.564510 1_1:-59523050 None:intergenic
TTGTAATGACACAGCAGATG+AGG 0.565429 1_1:+59522024 Msa0032430:CDS
GTCCAAAAGCTTCTTCGGAA+AGG 0.566021 1_1:+59528313 Msa0032430:CDS
AGAAGAACAAAGATTCAGTA+GGG 0.570029 1_1:+59528511 Msa0032430:CDS
CAAATCCAAAAGACAGAAAG+GGG 0.571325 1_1:+59528248 Msa0032430:CDS
GAAAGATGGCAGGAAAGGAA+AGG 0.571880 1_1:+59527604 Msa0032430:CDS
TGCATAACCAAGAACAAGCA+GGG 0.575155 1_1:+59528463 Msa0032430:CDS
GATGAGGCTCAAAAGAAGTA+GGG 0.575330 1_1:-59528703 None:intergenic
TGTAATGACACAGCAGATGA+GGG 0.575965 1_1:+59522025 Msa0032430:CDS
TGACAAACCAGCAAAAGACT+TGG 0.576336 1_1:+59528164 Msa0032430:CDS
GCAATGTTGCAACAGAAGCA+CGG 0.579403 1_1:-59522990 None:intergenic
TTCTTTCGATGAGATCACTT+CGG 0.585525 1_1:-59528289 None:intergenic
CCGCAATCTTTACTTGGCGA+AGG 0.588434 1_1:+59526916 Msa0032430:CDS
CGGAACTCCAGCTGCCGAAG+GGG 0.589924 1_1:+59527047 Msa0032430:CDS
AAAGCTACAGTATCAGCAGC+GGG 0.590881 1_1:+59528044 Msa0032430:CDS
TTCAAGAAAAGCGACTCCAC+GGG 0.595349 1_1:-59527648 None:intergenic
TTGTCAAAATCATCGTCAGA+AGG 0.599134 1_1:-59526291 None:intergenic
CAAAAGGTGACAGATGAAGA+TGG 0.601633 1_1:+59526174 Msa0032430:CDS
AAAACTACAAAATTAAGTCA+TGG 0.604774 1_1:+59529056 Msa0032430:three_prime_UTR
AACCCTCATTATGGACCGGG+TGG 0.605330 1_1:-59520202 None:intergenic
TACCCTGTGTCGGACTTCTG+TGG 0.606080 1_1:-59523951 None:intergenic
TAATGACACAGCAGATGAGG+GGG 0.608560 1_1:+59522027 Msa0032430:CDS
ATTCCACAGAAGTCCGACAC+AGG 0.608649 1_1:+59523948 Msa0032430:CDS
AGGAATGATCTTCAGCAGCA+TGG 0.610357 1_1:+59522376 Msa0032430:CDS
ACCCACCCGGTCCATAATGA+GGG 0.613936 1_1:+59520200 None:intergenic
AAGGAATATATACCCTGTGT+CGG 0.616888 1_1:-59523961 None:intergenic
ACTTGAAATAACTCAAGATG+AGG 0.618188 1_1:-59528719 None:intergenic
AAGGGTTCTCAAGGAAATGA+CGG 0.619296 1_1:+59528594 Msa0032430:CDS
CAGCAGCGGGCTCCTCACAA+TGG 0.623421 1_1:+59528057 Msa0032430:CDS
TAGATCCAAGTTCTCACACA+AGG 0.623451 1_1:+59528575 Msa0032430:CDS
TTTCTGCTGTTGCCATTGTG+AGG 0.623452 1_1:-59528069 None:intergenic
GAGTACCTGAGAGTTAGTGA+AGG 0.624188 1_1:-59520417 None:intergenic
TGAAGATCATTCCTTGAAAG+GGG 0.624383 1_1:-59522367 None:intergenic
CAAGCCATTGAGCTGAAGAA+CGG 0.627871 1_1:+59521517 Msa0032430:CDS
ATCTGCGGGGACTGTATGGG+AGG 0.628989 1_1:+59523920 Msa0032430:CDS
AAATGATAAACCCGACAATG+CGG 0.629902 1_1:+59528095 Msa0032430:CDS
CCAAATGGAAAATCTCCTCA+AGG 0.629918 1_1:+59528222 Msa0032430:CDS
CCAGATTCAAATAGTGAACA+CGG 0.633933 1_1:+59528189 Msa0032430:CDS
AAACCTTTGGTCCTGAACAT+CGG 0.642171 1_1:+59527968 Msa0032430:CDS
GTAATGACACAGCAGATGAG+GGG 0.644262 1_1:+59522026 Msa0032430:CDS
TCATGGTAACTAACATAGCA+CGG 0.646595 1_1:+59529073 Msa0032430:three_prime_UTR
CAAGAACAGCAGTATTCCCG+TGG 0.650331 1_1:+59527632 Msa0032430:CDS
ACCCTCATTATGGACCGGGT+GGG 0.652142 1_1:-59520201 None:intergenic
AGATGGTAGTACTACTACTG+AGG 0.654593 1_1:+59526191 Msa0032430:CDS
ATACCGAAGAAGTGAAGCAA+CGG 0.656518 1_1:+59526568 Msa0032430:CDS
AATGCGGGAGTTTACGCACA+TGG 0.658005 1_1:+59528111 Msa0032430:CDS
TAGTGATATTGATAGTGTTG+TGG 0.658825 1_1:+59526257 Msa0032430:CDS
CTCAATGCAGGCGTCCACGA+GGG 0.661595 1_1:+59526714 Msa0032430:intron
TGATATTGATAGTGTTGTGG+AGG 0.663472 1_1:+59526260 Msa0032430:CDS
TTCCACAGAAGTCCGACACA+GGG 0.667711 1_1:+59523949 Msa0032430:CDS
TTAAGAAAACCAGTCCCTCG+TGG 0.669577 1_1:-59526728 None:intergenic
ATGAAGGAAAATAGCGACGA+CGG 0.674278 1_1:+59520341 Msa0032430:CDS
GCATAACCAAGAACAAGCAG+GGG 0.676330 1_1:+59528464 Msa0032430:CDS
AACATCTAAAGAGTCCGACA+AGG 0.679032 1_1:+59526455 Msa0032430:CDS
ACTCAATGCAGGCGTCCACG+AGG 0.680693 1_1:+59526713 Msa0032430:intron
AAAAGCTACAGTATCAGCAG+CGG 0.686433 1_1:+59528043 Msa0032430:CDS
AGATCCAAGTTCTCACACAA+GGG 0.701976 1_1:+59528576 Msa0032430:CDS
TCGCCAAGTAAAGATTGCGG+TGG 0.704028 1_1:-59526913 None:intergenic
CTTCATCATCATCATCGGCG+AGG 0.707798 1_1:+59520295 Msa0032430:five_prime_UTR
TCAGGGTCTACACAACATCG+TGG 0.720317 1_1:+59520659 Msa0032430:intron
AATGGAAAATCTCCTCAAGG+AGG 0.725686 1_1:+59528225 Msa0032430:CDS
AATGACACAGCAGATGAGGG+GGG 0.726717 1_1:+59522028 Msa0032430:CDS
CCTTCGCCAAGTAAAGATTG+CGG 0.731180 1_1:-59526916 None:intergenic
GAAACAAAGAGTGTTAACGG+CGG 0.786080 1_1:-59520380 None:intergenic
GATTCAAATAGTGAACACGG+TGG 0.855909 1_1:+59528192 Msa0032430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATTTTTATTTTTATT+TGG - chr1_1:59527830-59527849 None:intergenic 0.0%
!! AAAAGAATGATAAATAAAAA+TGG - chr1_1:59520471-59520490 None:intergenic 10.0%
!!! AAAAATAAGTTTTTTTTTTC+AGG + chr1_1:59520641-59520660 Msa0032430:intron 10.0%
!!! AAAATAAGTTTTTTTTTTCA+GGG + chr1_1:59520642-59520661 Msa0032430:intron 10.0%
!! TTCTAATAATATATGTAAAA+CGG - chr1_1:59521420-59521439 None:intergenic 10.0%
!!! TTTTGTATTGATTTTTAATT+TGG + chr1_1:59523638-59523657 Msa0032430:intron 10.0%
!!! ACATAAAATAATTTTTTGTT+TGG + chr1_1:59523825-59523844 Msa0032430:intron 10.0%
!! TTTCATTAATAAATAGTTAT+TGG + chr1_1:59524798-59524817 Msa0032430:intron 10.0%
!!! AAAAATTACTTATTTTAATG+AGG + chr1_1:59525340-59525359 Msa0032430:intron 10.0%
!!! TCTTTTAAATTGTAATTAAT+AGG + chr1_1:59527008-59527027 Msa0032430:intron 10.0%
!! AAATTTAATATAAACAACTT+AGG + chr1_1:59529121-59529140 Msa0032430:three_prime_UTR 10.0%
!! CTTTATTAAATATCATATCA+TGG - chr1_1:59520800-59520819 None:intergenic 15.0%
!! ATTTCGATTATTATCAAATA+GGG - chr1_1:59520884-59520903 None:intergenic 15.0%
!! TATTTCGATTATTATCAAAT+AGG - chr1_1:59520885-59520904 None:intergenic 15.0%
!!! CAATTTTTGAACTTTATTAT+AGG + chr1_1:59521263-59521282 Msa0032430:intron 15.0%
!! TAAATATATAAATGAACAAC+TGG - chr1_1:59521903-59521922 None:intergenic 15.0%
!! TCTATATAAAAGATACTATA+TGG - chr1_1:59523116-59523135 None:intergenic 15.0%
!! AAAAAATCTTAATAACTACA+GGG + chr1_1:59523279-59523298 Msa0032430:intron 15.0%
!! ATTTACGAAATTCAAATTAT+AGG - chr1_1:59523573-59523592 None:intergenic 15.0%
!! ATAATTTGAATTTCGTAAAT+TGG + chr1_1:59523573-59523592 Msa0032430:intron 15.0%
!!! ATGATTATTTTATTGAAAAG+TGG - chr1_1:59524756-59524775 None:intergenic 15.0%
!! ATTAATAAATAGTTATTGGT+GGG + chr1_1:59524802-59524821 Msa0032430:intron 15.0%
!! TGTATATTAGTAGAAAAATA+CGG + chr1_1:59525055-59525074 Msa0032430:intron 15.0%
!! AAAATAATAAAAAAGTGATG+TGG + chr1_1:59525154-59525173 Msa0032430:intron 15.0%
!! TTATTATATTTATGTATACG+TGG - chr1_1:59525272-59525291 None:intergenic 15.0%
!!! TCATTTAAAAAAGTACTTTT+TGG - chr1_1:59525467-59525486 None:intergenic 15.0%
!!! AAAAGTACTTTTTTAAATGA+AGG + chr1_1:59525467-59525486 Msa0032430:intron 15.0%
!!! TCATTTAAAAAAGTACTTTT+TGG - chr1_1:59525467-59525486 None:intergenic 15.0%
!!! AAAAAGTACTTTTTTAAATG+AGG + chr1_1:59525466-59525485 Msa0032430:intron 15.0%
!! TTTAAATTGTAATTAATAGG+AGG + chr1_1:59527011-59527030 Msa0032430:intron 15.0%
!! TTAAATTGTAATTAATAGGA+GGG + chr1_1:59527012-59527031 Msa0032430:intron 15.0%
!! TTTGTGAAATATTTATAGTT+TGG + chr1_1:59527302-59527321 Msa0032430:intron 15.0%
!! TTTCATAACAAAATTATGAT+TGG - chr1_1:59528656-59528675 None:intergenic 15.0%
!! CATTGTACTAAATAACATAT+CGG - chr1_1:59520972-59520991 None:intergenic 20.0%
!!! TATGTTTTTTTCTTTTGGTA+GGG + chr1_1:59522243-59522262 Msa0032430:intron 20.0%
!!! GTTTTGTGTATAATTGTTAT+TGG + chr1_1:59522439-59522458 Msa0032430:intron 20.0%
!! GCATATCATAATTATTAAAC+AGG - chr1_1:59522516-59522535 None:intergenic 20.0%
!! CAAAAAATCTTAATAACTAC+AGG + chr1_1:59523278-59523297 Msa0032430:intron 20.0%
!! TATGCATTGTCTTAAAAAAT+AGG + chr1_1:59523331-59523350 Msa0032430:intron 20.0%
!! ATGCATTGTCTTAAAAAATA+GGG + chr1_1:59523332-59523351 Msa0032430:intron 20.0%
!! ATATCTTAATCTACAAACAT+GGG - chr1_1:59523436-59523455 None:intergenic 20.0%
!! AATATCTTAATCTACAAACA+TGG - chr1_1:59523437-59523456 None:intergenic 20.0%
!!! TTGATTTTTAATTTGGTCAT+AGG + chr1_1:59523645-59523664 Msa0032430:intron 20.0%
!! ATGGTAATATTCATTAAACA+GGG - chr1_1:59523685-59523704 None:intergenic 20.0%
!! AATGGTAATATTCATTAAAC+AGG - chr1_1:59523686-59523705 None:intergenic 20.0%
!! AACAAACTAAGTATCATAAA+TGG - chr1_1:59523704-59523723 None:intergenic 20.0%
!!! TCACTACTAAATATCTTTTT+TGG - chr1_1:59524284-59524303 None:intergenic 20.0%
!!! AAAATTTTTTTCCACATTGA+GGG - chr1_1:59524675-59524694 None:intergenic 20.0%
!!! TCAATGTGGAAAAAAATTTT+GGG + chr1_1:59524675-59524694 Msa0032430:intron 20.0%
!! CATTAATAAATAGTTATTGG+TGG + chr1_1:59524801-59524820 Msa0032430:intron 20.0%
!!! AAAATTGCACATTTTCAAAT+GGG + chr1_1:59525095-59525114 Msa0032430:intron 20.0%
!!! TATTGTTTATAGTTTTGTTG+CGG - chr1_1:59525402-59525421 None:intergenic 20.0%
!!! TATTGTTTATAGTTTTGTTG+CGG - chr1_1:59525402-59525421 None:intergenic 20.0%
!! TAATAATAATTGTTATACCC+AGG - chr1_1:59525911-59525930 None:intergenic 20.0%
!! GAAATATTTATAGTTTGGAA+AGG + chr1_1:59527307-59527326 Msa0032430:intron 20.0%
!!! GTTTTTGAAACATGAAAATT+TGG - chr1_1:59527357-59527376 None:intergenic 20.0%
!! TTGTAACATTCAAAACATAA+TGG - chr1_1:59527560-59527579 None:intergenic 20.0%
!! AATCAATCATAAAATGTGTA+CGG + chr1_1:59527852-59527871 Msa0032430:intron 20.0%
!!! AAGTTGAGATTTTAATTTCA+TGG + chr1_1:59528877-59528896 Msa0032430:intron 20.0%
!! TTACTTTAATCTATGACAAT+CGG - chr1_1:59529032-59529051 None:intergenic 20.0%
!! AAAACTACAAAATTAAGTCA+TGG + chr1_1:59529056-59529075 Msa0032430:three_prime_UTR 20.0%
!!! TTAGAAACAAAGAGTGTTAA+CGG - chr1_1:59520386-59520405 None:intergenic 25.0%
! TAAGTTCAGTTTAACTCATT+TGG + chr1_1:59520701-59520720 Msa0032430:intron 25.0%
! AAGTTCAGTTTAACTCATTT+GGG + chr1_1:59520702-59520721 Msa0032430:intron 25.0%
!! TCTTTTTACTTACAAAGATG+GGG - chr1_1:59521110-59521129 None:intergenic 25.0%
!! CTCTTTTTACTTACAAAGAT+GGG - chr1_1:59521111-59521130 None:intergenic 25.0%
!! ACTCTTTTTACTTACAAAGA+TGG - chr1_1:59521112-59521131 None:intergenic 25.0%
! CCATCAAAATATTGTGATTA+CGG - chr1_1:59521379-59521398 None:intergenic 25.0%
!! TTTCTTTTATGATGCAATAG+AGG + chr1_1:59521739-59521758 Msa0032430:intron 25.0%
!! TTCTTTTATGATGCAATAGA+GGG + chr1_1:59521740-59521759 Msa0032430:intron 25.0%
! AAAAATGATGATAAAGACAG+CGG + chr1_1:59521788-59521807 Msa0032430:CDS 25.0%
! AAAGATACATCCATAAAGAA+AGG - chr1_1:59522176-59522195 None:intergenic 25.0%
! AAAGAAAAAAACATAGAGCA+AGG - chr1_1:59522238-59522257 None:intergenic 25.0%
!!! TGCTCTATGTTTTTTTCTTT+TGG + chr1_1:59522238-59522257 Msa0032430:intron 25.0%
!!! CTATGTTTTTTTCTTTTGGT+AGG + chr1_1:59522242-59522261 Msa0032430:intron 25.0%
! TTTCAAATTACAGACAAGAT+AGG + chr1_1:59522417-59522436 Msa0032430:intron 25.0%
! AAATATGAACTGAAAAGAAC+AGG - chr1_1:59522545-59522564 None:intergenic 25.0%
! TACTCAACAATTGATCATAT+GGG - chr1_1:59522749-59522768 None:intergenic 25.0%
! ATACTCAACAATTGATCATA+TGG - chr1_1:59522750-59522769 None:intergenic 25.0%
! AAAGATTCTTTATACTGCTT+AGG + chr1_1:59522873-59522892 Msa0032430:intron 25.0%
! TTAGGATAGTAAGGTAATTA+TGG + chr1_1:59522891-59522910 Msa0032430:intron 25.0%
! ACATTGCATAAAAAAGAGAT+AGG + chr1_1:59523006-59523025 Msa0032430:CDS 25.0%
!!! AACATTTTTGTTGTTGTATG+TGG + chr1_1:59523724-59523743 Msa0032430:intron 25.0%
!!! ACATTTTTGTTGTTGTATGT+GGG + chr1_1:59523725-59523744 Msa0032430:intron 25.0%
! TCTATCTACTTGACTATATA+TGG + chr1_1:59523859-59523878 Msa0032430:intron 25.0%
! CTTTATATCAGGAAAAGAAA+AGG - chr1_1:59523983-59524002 None:intergenic 25.0%
!! ATTTGTTAACTAGTAGAGTT+TGG + chr1_1:59524386-59524405 Msa0032430:intron 25.0%
! AAATCCTATTGATGTAATTC+TGG + chr1_1:59524573-59524592 Msa0032430:intron 25.0%
! AATCCTATTGATGTAATTCT+GGG + chr1_1:59524574-59524593 Msa0032430:intron 25.0%
!!! CAAAATTTTTTTCCACATTG+AGG - chr1_1:59524676-59524695 None:intergenic 25.0%
!! CTCAATGTGGAAAAAAATTT+TGG + chr1_1:59524674-59524693 Msa0032430:intron 25.0%
!! CAATGTGGAAAAAAATTTTG+GGG + chr1_1:59524676-59524695 Msa0032430:intron 25.0%
!! AATGTGGAAAAAAATTTTGG+GGG + chr1_1:59524677-59524696 Msa0032430:intron 25.0%
! TCAATTGTGTCAAGTATTAT+GGG - chr1_1:59524897-59524916 None:intergenic 25.0%
!! CAAAATTGCACATTTTCAAA+TGG + chr1_1:59525094-59525113 Msa0032430:intron 25.0%
! TGAAAGAAATAGAGAGAAAA+TGG + chr1_1:59525239-59525258 Msa0032430:intron 25.0%
! GCAACAAAACTATAAACAAT+AGG + chr1_1:59525401-59525420 Msa0032430:intron 25.0%
! GCAACAAAACTATAAACAAT+AGG + chr1_1:59525401-59525420 Msa0032430:intron 25.0%
!! AGCAAATTGTATTTTACCAA+AGG + chr1_1:59525825-59525844 Msa0032430:intron 25.0%
!! GCAAATTGTATTTTACCAAA+GGG + chr1_1:59525826-59525845 Msa0032430:intron 25.0%
! ACATCTGTTATGATTTCTTT+AGG + chr1_1:59526147-59526166 Msa0032430:intron 25.0%
!!! TTTTCTTAAGTTTAAAACCG+CGG + chr1_1:59526742-59526761 Msa0032430:CDS 25.0%
!!! TAGACCATTAAAGGTTTTAA+AGG + chr1_1:59526829-59526848 Msa0032430:CDS 25.0%
! AAGAAATGAGAATAGTAAAG+TGG - chr1_1:59527173-59527192 None:intergenic 25.0%
!!! CAGATAAAGATTTTGAAAGA+TGG + chr1_1:59527590-59527609 Msa0032430:intron 25.0%
! TATCTTCACAATTGAGAAAT+GGG - chr1_1:59527745-59527764 None:intergenic 25.0%
! ATATCTTCACAATTGAGAAA+TGG - chr1_1:59527746-59527765 None:intergenic 25.0%
! AAGCTAAAAAATAACCAAGA+TGG + chr1_1:59528336-59528355 Msa0032430:CDS 25.0%
!! TATTTTCCTATTACTGTCAA+TGG - chr1_1:59528403-59528422 None:intergenic 25.0%
! AAAAACAATCTAAACAGCTT+AGG + chr1_1:59528622-59528641 Msa0032430:CDS 25.0%
! AAACCAAAAAATCACTCAAA+TGG + chr1_1:59528902-59528921 Msa0032430:intron 25.0%
CAAGAAAAACAAAGCAATGA+AGG + chr1_1:59520325-59520344 Msa0032430:CDS 30.0%
TGTTTCATGGTTACACAAAA+GGG + chr1_1:59520566-59520585 Msa0032430:CDS 30.0%
! GTTTTGTCAAATAACAGCTA+TGG + chr1_1:59520819-59520838 Msa0032430:intron 30.0%
!! TAAAAAGAGTTCGCCATTTT+TGG + chr1_1:59521122-59521141 Msa0032430:intron 30.0%
CAAATTGCAGTTACCAAAAA+TGG - chr1_1:59521138-59521157 None:intergenic 30.0%
AATACTAAACATGCTACTGT+TGG + chr1_1:59521184-59521203 Msa0032430:intron 30.0%
AGGAGAATATTGATATCATG+AGG + chr1_1:59521226-59521245 Msa0032430:intron 30.0%
!! CCGTAATCACAATATTTTGA+TGG + chr1_1:59521376-59521395 Msa0032430:intron 30.0%
! ATCTCTATCTGAAACAGAAT+TGG - chr1_1:59521643-59521662 None:intergenic 30.0%
CAAATCATCTGTACATCATT+CGG - chr1_1:59521680-59521699 None:intergenic 30.0%
AGAGTGAGAAAAGAAAACAA+GGG - chr1_1:59521720-59521739 None:intergenic 30.0%
AAGAGTGAGAAAAGAAAACA+AGG - chr1_1:59521721-59521740 None:intergenic 30.0%
CCAAAACTTTCACTTCTAAA+AGG - chr1_1:59521955-59521974 None:intergenic 30.0%
!! CCTTTTAGAAGTGAAAGTTT+TGG + chr1_1:59521952-59521971 Msa0032430:intron 30.0%
! CTGAAGTACTACTAAGAAAA+GGG - chr1_1:59522086-59522105 None:intergenic 30.0%
TTGATCTGATCCTTTCTTTA+TGG + chr1_1:59522163-59522182 Msa0032430:intron 30.0%
GTTGCTAGAACTGTTATATT+TGG + chr1_1:59522265-59522284 Msa0032430:CDS 30.0%
AATTGTTGAGTATGCTGATA+AGG + chr1_1:59522757-59522776 Msa0032430:intron 30.0%
TTATACTGCTTAGGATAGTA+AGG + chr1_1:59522882-59522901 Msa0032430:intron 30.0%
! GTAATTATGGTATTTTTCCC+AGG + chr1_1:59522904-59522923 Msa0032430:intron 30.0%
TTGCATAAAAAAGAGATAGG+AGG + chr1_1:59523009-59523028 Msa0032430:CDS 30.0%
TGCATAAAAAAGAGATAGGA+GGG + chr1_1:59523010-59523029 Msa0032430:CDS 30.0%
AAAAATAGGGAGTTACATCA+TGG + chr1_1:59523345-59523364 Msa0032430:intron 30.0%
AAAATAGGGAGTTACATCAT+GGG + chr1_1:59523346-59523365 Msa0032430:intron 30.0%
ATCTACAAACATGGGAAATT+AGG - chr1_1:59523428-59523447 None:intergenic 30.0%
! GTTGATAGAAATGTTGAACA+GGG - chr1_1:59523541-59523560 None:intergenic 30.0%
!! AGTTGATAGAAATGTTGAAC+AGG - chr1_1:59523542-59523561 None:intergenic 30.0%
AGTCAAGTAGATAGAAAACA+AGG - chr1_1:59523854-59523873 None:intergenic 30.0%
ACTTGACTATATATGGATAC+AGG + chr1_1:59523866-59523885 Msa0032430:intron 30.0%
AGGCCAAAGAAAATGAAATA+AGG + chr1_1:59523886-59523905 Msa0032430:intron 30.0%
GGCCAAAGAAAATGAAATAA+GGG + chr1_1:59523887-59523906 Msa0032430:intron 30.0%
!! GTCCCTTATTTCATTTTCTT+TGG - chr1_1:59523892-59523911 None:intergenic 30.0%
TTGCACGTTCATTCAAAAAA+TGG - chr1_1:59524478-59524497 None:intergenic 30.0%
AAAATGAATTGACACTTGTG+AGG - chr1_1:59524509-59524528 None:intergenic 30.0%
GTCAATTGTGTCAAGTATTA+TGG - chr1_1:59524898-59524917 None:intergenic 30.0%
TTAAGCTCAAAGTTATGCAT+TGG - chr1_1:59524934-59524953 None:intergenic 30.0%
AAATACGGTCAAAGTAAGTT+AGG + chr1_1:59525070-59525089 Msa0032430:intron 30.0%
! TCACATTTGAGGTCTTAAAT+GGG - chr1_1:59525190-59525209 None:intergenic 30.0%
! ATTTAAGACCTCAAATGTGA+GGG + chr1_1:59525190-59525209 Msa0032430:intron 30.0%
AGCTACAAAATGTTCTATGA+AGG + chr1_1:59525713-59525732 Msa0032430:intron 30.0%
ACCACATATTGTTCTAATGT+CGG - chr1_1:59526063-59526082 None:intergenic 30.0%
!! GATTTCTTTAGGACAACAAA+AGG + chr1_1:59526158-59526177 Msa0032430:intron 30.0%
!! TAGTGATATTGATAGTGTTG+TGG + chr1_1:59526257-59526276 Msa0032430:CDS 30.0%
GTTATTTACAGATTCGTCTT+TGG - chr1_1:59526367-59526386 None:intergenic 30.0%
! TTAACAGTTTCCTTGGATTT+TGG - chr1_1:59526420-59526439 None:intergenic 30.0%
AAAATCCAAGGAAACTGTTA+AGG + chr1_1:59526419-59526438 Msa0032430:CDS 30.0%
AAATCCAAGGAAACTGTTAA+GGG + chr1_1:59526420-59526439 Msa0032430:CDS 30.0%
! AGAAATATCTGAAACCTTGT+CGG - chr1_1:59526472-59526491 None:intergenic 30.0%
ATCTAATTCAAAGGGAAGAT+TGG - chr1_1:59526550-59526569 None:intergenic 30.0%
TCTTCGGTATCTAATTCAAA+GGG - chr1_1:59526558-59526577 None:intergenic 30.0%
TTCTTCGGTATCTAATTCAA+AGG - chr1_1:59526559-59526578 None:intergenic 30.0%
!! ATATTGTTCTAGGACATACT+TGG - chr1_1:59526646-59526665 None:intergenic 30.0%
CACACACAAAATATTGTTCT+AGG - chr1_1:59526656-59526675 None:intergenic 30.0%
!! AGAGCCTTTAAAACCTTTAA+TGG - chr1_1:59526836-59526855 None:intergenic 30.0%
!!! ATTAAAGGTTTTAAAGGCTC+TGG + chr1_1:59526835-59526854 Msa0032430:CDS 30.0%
! CGCAAAAAGTGAGTATTTTA+TGG + chr1_1:59527093-59527112 Msa0032430:intron 30.0%
TGTATTTGATCTTCCATACT+TGG + chr1_1:59527206-59527225 Msa0032430:intron 30.0%
GTATTTGATCTTCCATACTT+GGG + chr1_1:59527207-59527226 Msa0032430:intron 30.0%
!!! TGTTTTTCAGTCATTGACTT+TGG - chr1_1:59527402-59527421 None:intergenic 30.0%
!! TAAAGATTTTGAAAGATGGC+AGG + chr1_1:59527594-59527613 Msa0032430:CDS 30.0%
AGAGTTCTTAACAATAATCC+TGG + chr1_1:59527704-59527723 Msa0032430:CDS 30.0%
! GCTTTGTTAAAATTGTCAAC+TGG + chr1_1:59527785-59527804 Msa0032430:intron 30.0%
!! TTTGGAAGCGTTCAATTTAT+GGG - chr1_1:59527812-59527831 None:intergenic 30.0%
!! ATTTGGAAGCGTTCAATTTA+TGG - chr1_1:59527813-59527832 None:intergenic 30.0%
ATAGTTCCATTGACAGTAAT+AGG + chr1_1:59528394-59528413 Msa0032430:CDS 30.0%
GACAGTAATAGGAAAATATC+AGG + chr1_1:59528405-59528424 Msa0032430:CDS 30.0%
ACTGAATCTTTGTTCTTCTT+TGG - chr1_1:59528510-59528529 None:intergenic 30.0%
AAGAAGAACAAAGATTCAGT+AGG + chr1_1:59528510-59528529 Msa0032430:CDS 30.0%
AGAAGAACAAAGATTCAGTA+GGG + chr1_1:59528511-59528530 Msa0032430:CDS 30.0%
AATCTAAACAGCTTAGGAAA+TGG + chr1_1:59528628-59528647 Msa0032430:CDS 30.0%
ACTTGAAATAACTCAAGATG+AGG - chr1_1:59528722-59528741 None:intergenic 30.0%
!!! TTCTCTCTTTGAGATTTTAG+TGG + chr1_1:59528792-59528811 Msa0032430:intron 30.0%
!!! ATGCCATTTGAGTGATTTTT+TGG - chr1_1:59528908-59528927 None:intergenic 30.0%
TCCATTGTTGCATAATAATG+CGG - chr1_1:59528989-59529008 None:intergenic 30.0%
GAATCGAAAAACCCTCATTA+TGG - chr1_1:59520214-59520233 None:intergenic 35.0%
AGAAAGAAAGAAGCCAAGAA+GGG - chr1_1:59520256-59520275 None:intergenic 35.0%
AAGAAAGAAAGAAGCCAAGA+AGG - chr1_1:59520257-59520276 None:intergenic 35.0%
CATCTCTTCATCATCATCAT+CGG + chr1_1:59520290-59520309 Msa0032430:five_prime_UTR 35.0%
TGAGAGTTAGTGAAGGAATA+GGG - chr1_1:59520413-59520432 None:intergenic 35.0%
GAACAAACTTTCAGTGAAGT+TGG + chr1_1:59520530-59520549 Msa0032430:CDS 35.0%
CTGTTTCATGGTTACACAAA+AGG + chr1_1:59520565-59520584 Msa0032430:CDS 35.0%
TTGTCAAATAACAGCTATGG+TGG + chr1_1:59520822-59520841 Msa0032430:intron 35.0%
ACGCTGATATAGCTACTATT+TGG - chr1_1:59520998-59521017 None:intergenic 35.0%
GTGGTGAGTATTAATCATTC+CGG - chr1_1:59521085-59521104 None:intergenic 35.0%
! TTTGGTAACTGCAATTTGTC+TGG + chr1_1:59521140-59521159 Msa0032430:intron 35.0%
GTTCACAAAGCTTAGTTAAG+AGG + chr1_1:59521206-59521225 Msa0032430:intron 35.0%
TCAAAAATTGTATCCCTCCT+CGG - chr1_1:59521253-59521272 None:intergenic 35.0%
GTGAACATAAAAAGACTACC+CGG - chr1_1:59521323-59521342 None:intergenic 35.0%
! TTTCGATCTTCGATTTTCAC+GGG - chr1_1:59521596-59521615 None:intergenic 35.0%
! GTTTCGATCTTCGATTTTCA+CGG - chr1_1:59521597-59521616 None:intergenic 35.0%
TGAAAATCGAAGATCGAAAC+CGG + chr1_1:59521597-59521616 Msa0032430:CDS 35.0%
TTCAGTTCCAAAAGAACCAA+AGG + chr1_1:59521835-59521854 Msa0032430:CDS 35.0%
TGGATAAACCGAAAAACTCA+AGG + chr1_1:59521972-59521991 Msa0032430:CDS 35.0%
!!! GCTGCTTTTTTTATTTCCAC+AGG - chr1_1:59522001-59522020 None:intergenic 35.0%
! GCTGAAGTACTACTAAGAAA+AGG - chr1_1:59522087-59522106 None:intergenic 35.0%
GCTAGAACTGTTATATTTGG+TGG + chr1_1:59522268-59522287 Msa0032430:CDS 35.0%
TGAAGATCATTCCTTGAAAG+GGG - chr1_1:59522370-59522389 None:intergenic 35.0%
CTGAAGATCATTCCTTGAAA+GGG - chr1_1:59522371-59522390 None:intergenic 35.0%
TTCATACACTAACCATGAGA+TGG - chr1_1:59522595-59522614 None:intergenic 35.0%
! GATGAGATAGTTTTCCAGTT+AGG + chr1_1:59522812-59522831 Msa0032430:intron 35.0%
!! TTCTTGATTTGCATCCTAAC+TGG - chr1_1:59522829-59522848 None:intergenic 35.0%
GCATAAAAAAGAGATAGGAG+GGG + chr1_1:59523011-59523030 Msa0032430:CDS 35.0%
CATAAAAAAGAGATAGGAGG+GGG + chr1_1:59523012-59523031 Msa0032430:CDS 35.0%
CCAAAAAGAAAACCCTTTCA+AGG - chr1_1:59523399-59523418 None:intergenic 35.0%
! CCTTGAAAGGGTTTTCTTTT+TGG + chr1_1:59523396-59523415 Msa0032430:intron 35.0%
ACGTATCAGAATCAGATACA+AGG - chr1_1:59523480-59523499 None:intergenic 35.0%
AAGGAATATATACCCTGTGT+CGG - chr1_1:59523964-59523983 None:intergenic 35.0%
GTATCGAAACGCTTTATATC+AGG - chr1_1:59523994-59524013 None:intergenic 35.0%
!! AAGTTTCCTGTTTCTGTTTC+AGG + chr1_1:59524196-59524215 Msa0032430:intron 35.0%
AAACTCAATGGATCGAAGTT+TGG + chr1_1:59524227-59524246 Msa0032430:CDS 35.0%
AACTCAATGGATCGAAGTTT+GGG + chr1_1:59524228-59524247 Msa0032430:CDS 35.0%
AGACCCAGAATTACATCAAT+AGG - chr1_1:59524580-59524599 None:intergenic 35.0%
CTGGGTCTTAGATTTATAGA+AGG + chr1_1:59524592-59524611 Msa0032430:intron 35.0%
! GGTCTTTAACATTTAAGACC+CGG + chr1_1:59524636-59524655 Msa0032430:intron 35.0%
TCGTAATCCACTTAAGATTG+GGG - chr1_1:59524733-59524752 None:intergenic 35.0%
GTCGTAATCCACTTAAGATT+GGG - chr1_1:59524734-59524753 None:intergenic 35.0%
CTCTATCAAGAGGTCTAAAT+GGG - chr1_1:59524829-59524848 None:intergenic 35.0%
TTGTGTCAAGTATTATGGGA+CGG - chr1_1:59524893-59524912 None:intergenic 35.0%
! CTCACATTTGAGGTCTTAAA+TGG - chr1_1:59525191-59525210 None:intergenic 35.0%
! CATTTAAGACCTCAAATGTG+AGG + chr1_1:59525189-59525208 Msa0032430:intron 35.0%
!! CGGTAGTTTGTAATTTGTTG+TGG - chr1_1:59525382-59525401 None:intergenic 35.0%
!! CGGTAGTTTGTAATTTGTTG+TGG - chr1_1:59525382-59525401 None:intergenic 35.0%
! CATTTTGTAGCTATGATGCA+TGG - chr1_1:59525705-59525724 None:intergenic 35.0%
TCTTACTGTTGTATGTGCAT+TGG - chr1_1:59525789-59525808 None:intergenic 35.0%
AACAAACAATAGTTGCCCTT+TGG - chr1_1:59525844-59525863 None:intergenic 35.0%
GCACATATTGTTCTAGTGTT+GGG - chr1_1:59525972-59525991 None:intergenic 35.0%
AGCACATATTGTTCTAGTGT+TGG - chr1_1:59525973-59525992 None:intergenic 35.0%
CCACATATTGTTCTAATGTC+GGG - chr1_1:59526062-59526081 None:intergenic 35.0%
ACTGACAAAGAATCTGATCA+AGG + chr1_1:59526228-59526247 Msa0032430:CDS 35.0%
!! TGATATTGATAGTGTTGTGG+AGG + chr1_1:59526260-59526279 Msa0032430:CDS 35.0%
TTGTCAAAATCATCGTCAGA+AGG - chr1_1:59526294-59526313 None:intergenic 35.0%
!! TTCTGACGATGATTTTGACA+AGG + chr1_1:59526293-59526312 Msa0032430:CDS 35.0%
! GTTCTTTTCTTCAGAAGACA+CGG - chr1_1:59526394-59526413 None:intergenic 35.0%
AAAGAACAAGCCAAAATCCA+AGG + chr1_1:59526407-59526426 Msa0032430:CDS 35.0%
CAAATCAACTTCTGTTTCCT+TGG - chr1_1:59526508-59526527 None:intergenic 35.0%
TATGGTAGCTGATATGCAAT+AGG + chr1_1:59526972-59526991 Msa0032430:intron 35.0%
!! TTTGCGTTTTGACATATCAG+TGG - chr1_1:59527079-59527098 None:intergenic 35.0%
ATAACTTTACCACCCAAGTA+TGG - chr1_1:59527222-59527241 None:intergenic 35.0%
AGATCACTACAATCAGTTAC+AGG - chr1_1:59527272-59527291 None:intergenic 35.0%
CCAAGCAAATACCTGTAATT+CGG + chr1_1:59527463-59527482 Msa0032430:CDS 35.0%
!! ATTTTGAAAGATGGCAGGAA+AGG + chr1_1:59527599-59527618 Msa0032430:CDS 35.0%
!! TTGGAAGCGTTCAATTTATG+GGG - chr1_1:59527811-59527830 None:intergenic 35.0%
ATTGCTAGCATTTCTATGTG+CGG + chr1_1:59527897-59527916 Msa0032430:intron 35.0%
CGTTACGAAGTTTCAATTTC+TGG - chr1_1:59528023-59528042 None:intergenic 35.0%
AAATGATAAACCCGACAATG+CGG + chr1_1:59528095-59528114 Msa0032430:CDS 35.0%
CCAGATTCAAATAGTGAACA+CGG + chr1_1:59528189-59528208 Msa0032430:CDS 35.0%
GCAAATCCAAAAGACAGAAA+GGG + chr1_1:59528247-59528266 Msa0032430:CDS 35.0%
CAAATCCAAAAGACAGAAAG+GGG + chr1_1:59528248-59528267 Msa0032430:CDS 35.0%
ACTTCGGTATTTGTACTCTT+GGG - chr1_1:59528276-59528295 None:intergenic 35.0%
TTCTTTCGATGAGATCACTT+CGG - chr1_1:59528292-59528311 None:intergenic 35.0%
AGAAAGTCCAAAAGCTTCTT+CGG + chr1_1:59528308-59528327 Msa0032430:CDS 35.0%
GTAATTTAGCACCATGATTC+TGG - chr1_1:59528362-59528381 None:intergenic 35.0%
! CATGGTGCTAAATTACATGA+AGG + chr1_1:59528366-59528385 Msa0032430:CDS 35.0%
AAGAAAGAAGACGCAGTATT+TGG + chr1_1:59528429-59528448 Msa0032430:CDS 35.0%
GAGAGAACGCTATTACAAAA+AGG - chr1_1:59528779-59528798 None:intergenic 35.0%
! GGCATGAAGTTGATTAAATG+TGG + chr1_1:59528923-59528942 Msa0032430:intron 35.0%
TCCGCATTATTATGCAACAA+TGG + chr1_1:59528985-59529004 Msa0032430:intron 35.0%
TCATGGTAACTAACATAGCA+CGG + chr1_1:59529073-59529092 Msa0032430:three_prime_UTR 35.0%
AAAAACCCTCATTATGGACC+GGG - chr1_1:59520208-59520227 None:intergenic 40.0%
GAAAAACCCTCATTATGGAC+CGG - chr1_1:59520209-59520228 None:intergenic 40.0%
ATGAAGGAAAATAGCGACGA+CGG + chr1_1:59520341-59520360 Msa0032430:CDS 40.0%
TAACGGCGGACATTGTTTAA+CGG - chr1_1:59520369-59520388 None:intergenic 40.0%
!! GAAACAAAGAGTGTTAACGG+CGG - chr1_1:59520383-59520402 None:intergenic 40.0%
CTGAGAGTTAGTGAAGGAAT+AGG - chr1_1:59520414-59520433 None:intergenic 40.0%
CTATTCCTTCACTAACTCTC+AGG + chr1_1:59520412-59520431 Msa0032430:CDS 40.0%
! TCTACACAACATCGTGGTTT+TGG + chr1_1:59520665-59520684 Msa0032430:CDS 40.0%
GAAATTCTGCTACGCTATAG+CGG - chr1_1:59520755-59520774 None:intergenic 40.0%
TACTTACAAAGATGGGGTTG+TGG - chr1_1:59521104-59521123 None:intergenic 40.0%
TATTGATATCATGAGGACCG+AGG + chr1_1:59521233-59521252 Msa0032430:intron 40.0%
GTGCTTGCTTCAATAGTATC+CGG + chr1_1:59521301-59521320 Msa0032430:intron 40.0%
TGCTTGCTTCAATAGTATCC+GGG + chr1_1:59521302-59521321 Msa0032430:intron 40.0%
! CGTGCTTCACTACAATTTTC+CGG - chr1_1:59521558-59521577 None:intergenic 40.0%
! TTCGATCTTCGATTTTCACG+GGG - chr1_1:59521595-59521614 None:intergenic 40.0%
AGCATCAATCAACCTTGATC+CGG - chr1_1:59521619-59521638 None:intergenic 40.0%
GTGAGAAAAGAAAACAAGGG+AGG - chr1_1:59521717-59521736 None:intergenic 40.0%
!! GATAAAGACAGCGGATTATC+TGG + chr1_1:59521797-59521816 Msa0032430:CDS 40.0%
!!! GGTTCTTTTGGAACTGAAAC+AGG - chr1_1:59521833-59521852 None:intergenic 40.0%
!!! CCTTCTTCCTTTGGTTCTTT+TGG - chr1_1:59521845-59521864 None:intergenic 40.0%
CCAAAAGAACCAAAGGAAGA+AGG + chr1_1:59521842-59521861 Msa0032430:CDS 40.0%
CAATCACAACCTTCTTCCTT+TGG - chr1_1:59521854-59521873 None:intergenic 40.0%
! ACAGGCTTCCTTGAGTTTTT+CGG - chr1_1:59521983-59522002 None:intergenic 40.0%
TTGTAATGACACAGCAGATG+AGG + chr1_1:59522024-59522043 Msa0032430:CDS 40.0%
TGTAATGACACAGCAGATGA+GGG + chr1_1:59522025-59522044 Msa0032430:CDS 40.0%
CTATTAAGCATCCCCTTTCA+AGG + chr1_1:59522356-59522375 Msa0032430:CDS 40.0%
GCTGAAGATCATTCCTTGAA+AGG - chr1_1:59522372-59522391 None:intergenic 40.0%
AACACGAAGTGCAACACAAT+GGG - chr1_1:59522569-59522588 None:intergenic 40.0%
!!! TTGTGCTGTTTTATGTGCTC+TGG + chr1_1:59522644-59522663 Msa0032430:intron 40.0%
GTGATAACTGCTAGCTGATT+AGG + chr1_1:59523136-59523155 Msa0032430:intron 40.0%
AAGCTTCCATTTCTGAGTCT+TGG - chr1_1:59523759-59523778 None:intergenic 40.0%
TGTCAGAAACCTTCCTTTCA+AGG + chr1_1:59523781-59523800 Msa0032430:CDS 40.0%
TCAACAGATCGAACCTTGAA+AGG - chr1_1:59523797-59523816 None:intergenic 40.0%
! ATTTTCAGCATCTTGCTTGC+AGG - chr1_1:59524106-59524125 None:intergenic 40.0%
! TCGTCTCATAGCTGTTGATT+GGG + chr1_1:59524253-59524272 Msa0032430:CDS 40.0%
!! AAATTACCTTCCTCTGAAGC+AGG - chr1_1:59524320-59524339 None:intergenic 40.0%
!! TAAGAGCATCCACATTGGTA+GGG + chr1_1:59524615-59524634 Msa0032430:intron 40.0%
TGTTAAAGACCCTACCAATG+TGG - chr1_1:59524627-59524646 None:intergenic 40.0%
! TTTAAGACCCGGTACCTAAT+AGG + chr1_1:59524647-59524666 Msa0032430:intron 40.0%
TTAAGACCCCCAATCTTAAG+TGG + chr1_1:59524723-59524742 Msa0032430:intron 40.0%
CGTAATCCACTTAAGATTGG+GGG - chr1_1:59524732-59524751 None:intergenic 40.0%
GGTCGTAATCCACTTAAGAT+TGG - chr1_1:59524735-59524754 None:intergenic 40.0%
CCTCTATCAAGAGGTCTAAA+TGG - chr1_1:59524830-59524849 None:intergenic 40.0%
CCATTTAGACCTCTTGATAG+AGG + chr1_1:59524827-59524846 Msa0032430:intron 40.0%
AATGGAGATCCTCTATCAAG+AGG - chr1_1:59524839-59524858 None:intergenic 40.0%
TCTTGATAGAGGATCTCCAT+TGG + chr1_1:59524838-59524857 Msa0032430:intron 40.0%
! ATGCATTGGCATGCGTAATA+AGG - chr1_1:59524920-59524939 None:intergenic 40.0%
AAAAAAGTGATGTGGCCATG+TGG + chr1_1:59525162-59525181 Msa0032430:intron 40.0%
GGCACAATACATCATGAAGA+AGG + chr1_1:59525549-59525568 Msa0032430:intron 40.0%
CAGTATGTACACATGTTCCT+GGG + chr1_1:59525891-59525910 Msa0032430:intron 40.0%
CCCGACATTAGAACAATATG+TGG + chr1_1:59526059-59526078 Msa0032430:intron 40.0%
CAAAAGGTGACAGATGAAGA+TGG + chr1_1:59526174-59526193 Msa0032430:CDS 40.0%
AGATGGTAGTACTACTACTG+AGG + chr1_1:59526191-59526210 Msa0032430:CDS 40.0%
AACATCTAAAGAGTCCGACA+AGG + chr1_1:59526455-59526474 Msa0032430:CDS 40.0%
TTCTAAGCCTGAAACTTCCA+AGG + chr1_1:59526488-59526507 Msa0032430:CDS 40.0%
TCTGTTTCCTTGGAAGTTTC+AGG - chr1_1:59526498-59526517 None:intergenic 40.0%
ATACCGAAGAAGTGAAGCAA+CGG + chr1_1:59526568-59526587 Msa0032430:CDS 40.0%
AAACCGTTGCTTCACTTCTT+CGG - chr1_1:59526574-59526593 None:intergenic 40.0%
! AAGCAACGGTTTTCTGCATT+TGG + chr1_1:59526582-59526601 Msa0032430:CDS 40.0%
ACTCCTCTATTACTCAATGC+AGG + chr1_1:59526702-59526721 Msa0032430:intron 40.0%
!!! TGGGATGGGTATTTTGGTAA+GGG + chr1_1:59526805-59526824 Msa0032430:CDS 40.0%
!! AAAGGCTCTGGACAAGAAAT+CGG + chr1_1:59526847-59526866 Msa0032430:CDS 40.0%
TAGGAGGGACTTATTCTTGA+CGG + chr1_1:59527027-59527046 Msa0032430:intron 40.0%
TTTGATCTTCCATACTTGGG+TGG + chr1_1:59527210-59527229 Msa0032430:intron 40.0%
CCGAATTACAGGTATTTGCT+TGG - chr1_1:59527466-59527485 None:intergenic 40.0%
!! ATTCGGCAGGTTGGTTAAAT+AGG + chr1_1:59527480-59527499 Msa0032430:intron 40.0%
ATTCAAGAAAAGCGACTCCA+CGG - chr1_1:59527652-59527671 None:intergenic 40.0%
! GGGTGTAATTGTTTGTTACC+AGG - chr1_1:59527725-59527744 None:intergenic 40.0%
TCATTGACCACAGAAACCTT+TGG + chr1_1:59527955-59527974 Msa0032430:intron 40.0%
AAACCTTTGGTCCTGAACAT+CGG + chr1_1:59527968-59527987 Msa0032430:CDS 40.0%
TCAAGAGCAAACTCCACAAT+TGG - chr1_1:59527994-59528013 None:intergenic 40.0%
AAAAGCTACAGTATCAGCAG+CGG + chr1_1:59528043-59528062 Msa0032430:CDS 40.0%
AATGATAAACCCGACAATGC+GGG + chr1_1:59528096-59528115 Msa0032430:CDS 40.0%
TGACAAACCAGCAAAAGACT+TGG + chr1_1:59528164-59528183 Msa0032430:CDS 40.0%
CCGTGTTCACTATTTGAATC+TGG - chr1_1:59528192-59528211 None:intergenic 40.0%
GATTCAAATAGTGAACACGG+TGG + chr1_1:59528192-59528211 Msa0032430:CDS 40.0%
! CCTTGAGGAGATTTTCCATT+TGG - chr1_1:59528225-59528244 None:intergenic 40.0%
CCAAATGGAAAATCTCCTCA+AGG + chr1_1:59528222-59528241 Msa0032430:CDS 40.0%
AATGGAAAATCTCCTCAAGG+AGG + chr1_1:59528225-59528244 Msa0032430:CDS 40.0%
GGCAAATCCAAAAGACAGAA+AGG + chr1_1:59528246-59528265 Msa0032430:CDS 40.0%
CTTCGGTATTTGTACTCTTG+GGG - chr1_1:59528275-59528294 None:intergenic 40.0%
CACTTCGGTATTTGTACTCT+TGG - chr1_1:59528277-59528296 None:intergenic 40.0%
! TTCCTTTCCGAAGAAGCTTT+TGG - chr1_1:59528318-59528337 None:intergenic 40.0%
AAGACGCAGTATTTGGAAAG+AGG + chr1_1:59528436-59528455 Msa0032430:CDS 40.0%
ATGCATAACCAAGAACAAGC+AGG + chr1_1:59528462-59528481 Msa0032430:CDS 40.0%
TGCATAACCAAGAACAAGCA+GGG + chr1_1:59528463-59528482 Msa0032430:CDS 40.0%
! GGGAAAAGGTTTCTAGGAAA+AGG + chr1_1:59528484-59528503 Msa0032430:CDS 40.0%
GAACAAAGATTCAGTAGGGA+AGG + chr1_1:59528515-59528534 Msa0032430:CDS 40.0%
TAGATCCAAGTTCTCACACA+AGG + chr1_1:59528575-59528594 Msa0032430:CDS 40.0%
AGATCCAAGTTCTCACACAA+GGG + chr1_1:59528576-59528595 Msa0032430:CDS 40.0%
AAGGGTTCTCAAGGAAATGA+CGG + chr1_1:59528594-59528613 Msa0032430:CDS 40.0%
GATGAGGCTCAAAAGAAGTA+GGG - chr1_1:59528706-59528725 None:intergenic 40.0%
AGATGAGGCTCAAAAGAAGT+AGG - chr1_1:59528707-59528726 None:intergenic 40.0%
TGATTAAATGTGGTTCGCAG+AGG + chr1_1:59528933-59528952 Msa0032430:intron 40.0%
GAGTACCTGAGAGTTAGTGA+AGG - chr1_1:59520420-59520439 None:intergenic 45.0%
TCAGTGAAGTTGGACCTGTT+AGG + chr1_1:59520540-59520559 Msa0032430:CDS 45.0%
GGGATGCTCATGTTAAACAG+CGG - chr1_1:59520864-59520883 None:intergenic 45.0%
CGATCTGCGATTGATTAGAC+CGG + chr1_1:59521063-59521082 Msa0032430:intron 45.0%
TATGTTCACTCTGCGTGTTG+TGG + chr1_1:59521334-59521353 Msa0032430:intron 45.0%
CTGCGTGTTGTGGTAATTTG+TGG + chr1_1:59521344-59521363 Msa0032430:intron 45.0%
CAAGCCATTGAGCTGAAGAA+CGG + chr1_1:59521517-59521536 Msa0032430:CDS 45.0%
TGAACCGTTCTTCAGCTCAA+TGG - chr1_1:59521524-59521543 None:intergenic 45.0%
TGAGCTGAAGAACGGTTCAT+TGG + chr1_1:59521525-59521544 Msa0032430:CDS 45.0%
CTGAAGAACGGTTCATTGGT+TGG + chr1_1:59521529-59521548 Msa0032430:CDS 45.0%
GATGCAATAGAGGGCAATGA+AGG + chr1_1:59521749-59521768 Msa0032430:intron 45.0%
GAAAAACTCAAGGAAGCCTG+TGG + chr1_1:59521982-59522001 Msa0032430:CDS 45.0%
GTAATGACACAGCAGATGAG+GGG + chr1_1:59522026-59522045 Msa0032430:CDS 45.0%
TAATGACACAGCAGATGAGG+GGG + chr1_1:59522027-59522046 Msa0032430:CDS 45.0%
TGGTCTCGTGAATTCTGCTA+TGG + chr1_1:59522288-59522307 Msa0032430:CDS 45.0%
AGGAATGATCTTCAGCAGCA+TGG + chr1_1:59522376-59522395 Msa0032430:CDS 45.0%
CAACACGAAGTGCAACACAA+TGG - chr1_1:59522570-59522589 None:intergenic 45.0%
! CAATGTTGCAACAGAAGCAC+GGG - chr1_1:59522992-59523011 None:intergenic 45.0%
GCAATGTTGCAACAGAAGCA+CGG - chr1_1:59522993-59523012 None:intergenic 45.0%
CTCGTCATAGAACACATCAG+AGG + chr1_1:59523074-59523093 Msa0032430:intron 45.0%
! TATGCGTCTAGAGCCTTGAA+AGG + chr1_1:59523383-59523402 Msa0032430:intron 45.0%
! ATGCGTCTAGAGCCTTGAAA+GGG + chr1_1:59523384-59523403 Msa0032430:intron 45.0%
!! TTTGTTGTTGTATGTGGGCC+AGG + chr1_1:59523730-59523749 Msa0032430:intron 45.0%
! TTGTTGTTGTATGTGGGCCA+GGG + chr1_1:59523731-59523750 Msa0032430:intron 45.0%
CAGATCGAACCTTGAAAGGA+AGG - chr1_1:59523793-59523812 None:intergenic 45.0%
! AAGGGACGCATTTTCATCTG+CGG + chr1_1:59523905-59523924 Msa0032430:CDS 45.0%
AAGACTGCACACAGGAAATG+AGG - chr1_1:59524055-59524074 None:intergenic 45.0%
TCCTGTGTGCAGTCTTTCAA+AGG + chr1_1:59524059-59524078 Msa0032430:intron 45.0%
CCTGTGTGCAGTCTTTCAAA+GGG + chr1_1:59524060-59524079 Msa0032430:intron 45.0%
GAATCGCCTGAAACAGAAAC+AGG - chr1_1:59524205-59524224 None:intergenic 45.0%
CAGGCGATTCGAAAACTCAA+TGG + chr1_1:59524215-59524234 Msa0032430:intron 45.0%
GTCGTCTCATAGCTGTTGAT+TGG + chr1_1:59524252-59524271 Msa0032430:CDS 45.0%
!! GAAGGTAAGAGCATCCACAT+TGG + chr1_1:59524610-59524629 Msa0032430:intron 45.0%
!! GTAAGAGCATCCACATTGGT+AGG + chr1_1:59524614-59524633 Msa0032430:intron 45.0%
!! TGAGGGTACCTATTAGGTAC+CGG - chr1_1:59524658-59524677 None:intergenic 45.0%
!! CCACATTGAGGGTACCTATT+AGG - chr1_1:59524664-59524683 None:intergenic 45.0%
CCTAATAGGTACCCTCAATG+TGG + chr1_1:59524661-59524680 Msa0032430:intron 45.0%
TTTGGGGGTCTCTTAAGACT+CGG + chr1_1:59524692-59524711 Msa0032430:intron 45.0%
ATAGAGGATCTCCATTGGAG+TGG + chr1_1:59524843-59524862 Msa0032430:intron 45.0%
TAGGTACTCAACCACTCCAA+TGG - chr1_1:59524857-59524876 None:intergenic 45.0%
GGAGTGGTTGAGTACCTATT+AGG + chr1_1:59524859-59524878 Msa0032430:intron 45.0%
GTCAAGTATTATGGGACGGA+GGG - chr1_1:59524889-59524908 None:intergenic 45.0%
TGTCAAGTATTATGGGACGG+AGG - chr1_1:59524890-59524909 None:intergenic 45.0%
! GGTCTTAAATGGGTTCCACA+TGG - chr1_1:59525180-59525199 None:intergenic 45.0%
AATGGAGACCCTCACATTTG+AGG - chr1_1:59525201-59525220 None:intergenic 45.0%
AAATGTGAGGGTCTCCATTG+TGG + chr1_1:59525202-59525221 Msa0032430:intron 45.0%
! GTCTCTTAGAGCATCCACAA+TGG - chr1_1:59525219-59525238 None:intergenic 45.0%
GAGATCACTGTTCTGGTGAA+GGG - chr1_1:59525578-59525597 None:intergenic 45.0%
TGAGATCACTGTTCTGGTGA+AGG - chr1_1:59525579-59525598 None:intergenic 45.0%
GGTGTCTGATAAGTATCCTG+TGG + chr1_1:59525636-59525655 Msa0032430:intron 45.0%
CTTCAGAAATGGACAACCAC+AGG - chr1_1:59525655-59525674 None:intergenic 45.0%
GCAGTATGTACACATGTTCC+TGG + chr1_1:59525890-59525909 Msa0032430:intron 45.0%
TACAGATTCGTCTTTGGCAG+AGG - chr1_1:59526361-59526380 None:intergenic 45.0%
TGCACCCTTAACAGTTTCCT+TGG - chr1_1:59526427-59526446 None:intergenic 45.0%
CTAGGACATACTTGGTCACT+TGG - chr1_1:59526638-59526657 None:intergenic 45.0%
ACGCCTGCATTGAGTAATAG+AGG - chr1_1:59526708-59526727 None:intergenic 45.0%
TTAAGAAAACCAGTCCCTCG+TGG - chr1_1:59526731-59526750 None:intergenic 45.0%
TCAACTGCCAATACTGCTTC+TGG + chr1_1:59526785-59526804 Msa0032430:CDS 45.0%
CAACTGCCAATACTGCTTCT+GGG + chr1_1:59526786-59526805 Msa0032430:CDS 45.0%
!!! TGCTTCTGGGATGGGTATTT+TGG + chr1_1:59526799-59526818 Msa0032430:CDS 45.0%
!!! CTGGGATGGGTATTTTGGTA+AGG + chr1_1:59526804-59526823 Msa0032430:CDS 45.0%
!!! GGGATGGGTATTTTGGTAAG+GGG + chr1_1:59526806-59526825 Msa0032430:CDS 45.0%
GGTAAGGGGTAGACCATTAA+AGG + chr1_1:59526820-59526839 Msa0032430:CDS 45.0%
! CAAGAAATCGGCTCATGACA+AGG + chr1_1:59526859-59526878 Msa0032430:CDS 45.0%
AGACCACCGCAATCTTTACT+TGG + chr1_1:59526910-59526929 Msa0032430:CDS 45.0%
CCTTCGCCAAGTAAAGATTG+CGG - chr1_1:59526919-59526938 None:intergenic 45.0%
GCAAATACCTGTAATTCGGC+AGG + chr1_1:59527467-59527486 Msa0032430:CDS 45.0%
ATACCTGTAATTCGGCAGGT+TGG + chr1_1:59527471-59527490 Msa0032430:intron 45.0%
TAACCAACCTGCCGAATTAC+AGG - chr1_1:59527477-59527496 None:intergenic 45.0%
GAAAGATGGCAGGAAAGGAA+AGG + chr1_1:59527604-59527623 Msa0032430:CDS 45.0%
TTCAAGAAAAGCGACTCCAC+GGG - chr1_1:59527651-59527670 None:intergenic 45.0%
TTCAGGACCAAAGGTTTCTG+TGG - chr1_1:59527965-59527984 None:intergenic 45.0%
AAAGCTACAGTATCAGCAGC+GGG + chr1_1:59528044-59528063 Msa0032430:CDS 45.0%
TTTCTGCTGTTGCCATTGTG+AGG - chr1_1:59528072-59528091 None:intergenic 45.0%
! CTTTTGGATTTGCCTCCTTG+AGG - chr1_1:59528240-59528259 None:intergenic 45.0%
GTCCAAAAGCTTCTTCGGAA+AGG + chr1_1:59528313-59528332 Msa0032430:CDS 45.0%
AACCAAGATGGCCAGAATCA+TGG + chr1_1:59528348-59528367 Msa0032430:CDS 45.0%
GCATAACCAAGAACAAGCAG+GGG + chr1_1:59528464-59528483 Msa0032430:CDS 45.0%
AAGCAGGGGAAAAGGTTTCT+AGG + chr1_1:59528478-59528497 Msa0032430:CDS 45.0%
AGAACCCTTGTGTGAGAACT+TGG - chr1_1:59528583-59528602 None:intergenic 45.0%
TTCTCACACAAGGGTTCTCA+AGG + chr1_1:59528585-59528604 Msa0032430:CDS 45.0%
!! TTAAAAAAAAAAATATTTCA+TGG - chr1_1:59522109-59522128 None:intergenic 5.0%
!!! TTTTAATTTTTTTTAATGTT+TGG + chr1_1:59522123-59522142 Msa0032430:intron 5.0%
!!! TTTAATTTTTTTTAATGTTT+GGG + chr1_1:59522124-59522143 Msa0032430:intron 5.0%
!! TGTTTAATTATAAAATAAAA+AGG - chr1_1:59522710-59522729 None:intergenic 5.0%
!!! TTGTTTATATTAAATTTTAA+TGG - chr1_1:59529118-59529137 None:intergenic 5.0%
CTTCATCATCATCATCGGCG+AGG + chr1_1:59520295-59520314 Msa0032430:five_prime_UTR 50.0%
! ACCTGTTAGGCGCTGTTTCA+TGG + chr1_1:59520553-59520572 Msa0032430:CDS 50.0%
ACCATGAAACAGCGCCTAAC+AGG - chr1_1:59520557-59520576 None:intergenic 50.0%
TCAGGGTCTACACAACATCG+TGG + chr1_1:59520659-59520678 Msa0032430:intron 50.0%
TGATATCATGAGGACCGAGG+AGG + chr1_1:59521236-59521255 Msa0032430:intron 50.0%
GATATCATGAGGACCGAGGA+GGG + chr1_1:59521237-59521256 Msa0032430:intron 50.0%
CGTTCTTCAGCTCAATGGCT+TGG - chr1_1:59521519-59521538 None:intergenic 50.0%
!! ACGGTTCATTGGTTGGTGAC+CGG + chr1_1:59521536-59521555 Msa0032430:CDS 50.0%
! GATCTTCGATTTTCACGGGG+AGG - chr1_1:59521592-59521611 None:intergenic 50.0%
CGAAGATCGAAACCGGATCA+AGG + chr1_1:59521604-59521623 Msa0032430:CDS 50.0%
AATGACACAGCAGATGAGGG+GGG + chr1_1:59522028-59522047 Msa0032430:CDS 50.0%
!! ACACACAGTGCCGATTTCTC+TGG - chr1_1:59522335-59522354 None:intergenic 50.0%
CTTCGTGTTGAGCCATCTCA+TGG + chr1_1:59522580-59522599 Msa0032430:intron 50.0%
AGATAGGAGGGGGAACTGTT+TGG + chr1_1:59523022-59523041 Msa0032430:CDS 50.0%
GATAGGAGGGGGAACTGTTT+GGG + chr1_1:59523023-59523042 Msa0032430:CDS 50.0%
ACTTTACCTCCCCACCAAGT+TGG - chr1_1:59523053-59523072 None:intergenic 50.0%
ATTTCTGAGTCTTGGCTCCC+TGG - chr1_1:59523751-59523770 None:intergenic 50.0%
AGGGAGCCAAGACTCAGAAA+TGG + chr1_1:59523750-59523769 Msa0032430:intron 50.0%
! AGGGACGCATTTTCATCTGC+GGG + chr1_1:59523906-59523925 Msa0032430:CDS 50.0%
TTTCATCTGCGGGGACTGTA+TGG + chr1_1:59523916-59523935 Msa0032430:CDS 50.0%
TTCATCTGCGGGGACTGTAT+GGG + chr1_1:59523917-59523936 Msa0032430:CDS 50.0%
ATTCCACAGAAGTCCGACAC+AGG + chr1_1:59523948-59523967 Msa0032430:CDS 50.0%
TTCCACAGAAGTCCGACACA+GGG + chr1_1:59523949-59523968 Msa0032430:CDS 50.0%
! CCCTTTGAAAGACTGCACAC+AGG - chr1_1:59524063-59524082 None:intergenic 50.0%
!! CTCTGAAGCAGGAGCATCAT+TGG - chr1_1:59524309-59524328 None:intergenic 50.0%
CAATGATGCTCCTGCTTCAG+AGG + chr1_1:59524307-59524326 Msa0032430:CDS 50.0%
!! GAGGGTACCTATTAGGTACC+GGG - chr1_1:59524657-59524676 None:intergenic 50.0%
TTGGGGGTCTCTTAAGACTC+GGG + chr1_1:59524693-59524712 Msa0032430:intron 50.0%
GTCGTCTATTGCGAGACAGA+GGG + chr1_1:59525117-59525136 Msa0032430:intron 50.0%
TAACAGTGACCTCACCACGT+CGG + chr1_1:59525436-59525455 Msa0032430:intron 50.0%
!!! ACTTTTTGGCTGTTCCGACG+TGG - chr1_1:59525453-59525472 None:intergenic 50.0%
ACGTGGTGAGATCACTGTTC+TGG - chr1_1:59525585-59525604 None:intergenic 50.0%
GAACAGTGATCTCACCACGT+CGG + chr1_1:59525585-59525604 Msa0032430:intron 50.0%
!!! ACTTTTTGGCTGTTCCGACG+TGG - chr1_1:59525453-59525472 None:intergenic 50.0%
GCGAGTACACGCTTCAGAAA+TGG - chr1_1:59525666-59525685 None:intergenic 50.0%
CGTGTACTCGCCTAAATCCA+GGG + chr1_1:59525675-59525694 Msa0032430:intron 50.0%
CCAGTGTCTTATACTCCTCC+CGG - chr1_1:59525755-59525774 None:intergenic 50.0%
! TTGGTCACTTGGTGGAGAAC+AGG - chr1_1:59526627-59526646 None:intergenic 50.0%
GGACATACTTGGTCACTTGG+TGG - chr1_1:59526635-59526654 None:intergenic 50.0%
TGCATTATCAGCTGCTTCCG+CGG - chr1_1:59526762-59526781 None:intergenic 50.0%
! TGCCAATACTGCTTCTGGGA+TGG + chr1_1:59526790-59526809 Msa0032430:CDS 50.0%
!! GCCAATACTGCTTCTGGGAT+GGG + chr1_1:59526791-59526810 Msa0032430:CDS 50.0%
ACCCATCCCAGAAGCAGTAT+TGG - chr1_1:59526795-59526814 None:intergenic 50.0%
! ATCGGCTCATGACAAGGAAC+AGG + chr1_1:59526865-59526884 Msa0032430:CDS 50.0%
TCGCCAAGTAAAGATTGCGG+TGG - chr1_1:59526916-59526935 None:intergenic 50.0%
CCGCAATCTTTACTTGGCGA+AGG + chr1_1:59526916-59526935 Msa0032430:CDS 50.0%
GCATATCAGCTACCATAGCC+TGG - chr1_1:59526969-59526988 None:intergenic 50.0%
ATCAGTGGCTGAAACCCCTT+CGG - chr1_1:59527064-59527083 None:intergenic 50.0%
CAAGAACAGCAGTATTCCCG+TGG + chr1_1:59527632-59527651 Msa0032430:CDS 50.0%
TCCTGAACATCGGCCAATTG+TGG + chr1_1:59527978-59527997 Msa0032430:CDS 50.0%
TCCACAATTGGCCGATGTTC+AGG - chr1_1:59527982-59528001 None:intergenic 50.0%
TGCGTAAACTCCCGCATTGT+CGG - chr1_1:59528109-59528128 None:intergenic 50.0%
AATGCGGGAGTTTACGCACA+TGG + chr1_1:59528111-59528130 Msa0032430:CDS 50.0%
!! TCTGGTGCCAAGTCTTTTGC+TGG - chr1_1:59528174-59528193 None:intergenic 50.0%
CACCATGATTCTGGCCATCT+TGG - chr1_1:59528353-59528372 None:intergenic 50.0%
! CCTTTTCCCCTGCTTGTTCT+TGG - chr1_1:59528473-59528492 None:intergenic 50.0%
CCAAGAACAAGCAGGGGAAA+AGG + chr1_1:59528470-59528489 Msa0032430:CDS 50.0%
ACGCACGCTCAAACCCTTCT+TGG + chr1_1:59520240-59520259 Msa0032430:five_prime_UTR 55.0%
ATCATCATCGGCGAGGCGAT+GGG + chr1_1:59520302-59520321 Msa0032430:exon 55.0%
GGCTTGGCGGTGAACATCTT+CGG - chr1_1:59522314-59522333 None:intergenic 55.0%
CACCGCCAAGCCAGAGAAAT+CGG + chr1_1:59522322-59522341 Msa0032430:CDS 55.0%
!! TGCCGATTTCTCTGGCTTGG+CGG - chr1_1:59522327-59522346 None:intergenic 55.0%
!! CAGTGCCGATTTCTCTGGCT+TGG - chr1_1:59522330-59522349 None:intergenic 55.0%
TTCCCAGGTCTGCTGCAAGA+AGG + chr1_1:59522919-59522938 Msa0032430:intron 55.0%
AGCCTTCTTGCAGCAGACCT+GGG - chr1_1:59522924-59522943 None:intergenic 55.0%
ACTGTTTGGGCACGCCAACT+TGG + chr1_1:59523036-59523055 Msa0032430:CDS 55.0%
TTTGGGCACGCCAACTTGGT+GGG + chr1_1:59523040-59523059 Msa0032430:CDS 55.0%
! GGGACGCATTTTCATCTGCG+GGG + chr1_1:59523907-59523926 Msa0032430:CDS 55.0%
TACCCTGTGTCGGACTTCTG+TGG - chr1_1:59523954-59523973 None:intergenic 55.0%
GATGCTCCTGCTTCAGAGGA+AGG + chr1_1:59524311-59524330 Msa0032430:CDS 55.0%
TGGGGGTCTCTTAAGACTCG+GGG + chr1_1:59524694-59524713 Msa0032430:intron 55.0%
!! GGACGGAGGGAGTACCTAAT+AGG - chr1_1:59524876-59524895 None:intergenic 55.0%
GGTCGTCTATTGCGAGACAG+AGG + chr1_1:59525116-59525135 Msa0032430:intron 55.0%
GCGTGTACTCGCCTAAATCC+AGG + chr1_1:59525674-59525693 Msa0032430:intron 55.0%
GCATGGACAGCCCTGGATTT+AGG - chr1_1:59525688-59525707 None:intergenic 55.0%
CTATGATGCATGGACAGCCC+TGG - chr1_1:59525695-59525714 None:intergenic 55.0%
AGGCAGCTAGACTGCACTAC+CGG + chr1_1:59525733-59525752 Msa0032430:intron 55.0%
! CCGGGAGGAGTATAAGACAC+TGG + chr1_1:59525752-59525771 Msa0032430:intron 55.0%
TCCTCTGTACCTCGTGTTCC+AGG + chr1_1:59526948-59526967 Msa0032430:intron 55.0%
GTACCTCGTGTTCCAGGCTA+TGG + chr1_1:59526954-59526973 Msa0032430:intron 55.0%
CTACCATAGCCTGGAACACG+AGG - chr1_1:59526960-59526979 None:intergenic 55.0%
TGGCCGATGTTCAGGACCAA+AGG - chr1_1:59527974-59527993 None:intergenic 55.0%
GCGTAAACTCCCGCATTGTC+GGG - chr1_1:59528108-59528127 None:intergenic 55.0%
! CACGGTGGTAGAGTGCCAAA+TGG + chr1_1:59528207-59528226 Msa0032430:CDS 55.0%
! GGGGTCCCCTTTCTGTCTTT+TGG - chr1_1:59528256-59528275 None:intergenic 55.0%
CATCATCATCGGCGAGGCGA+TGG + chr1_1:59520301-59520320 Msa0032430:exon 60.0%
! CGATTTTCACGGGGAGGACG+AGG - chr1_1:59521586-59521605 None:intergenic 60.0%
CAGCCTTCTTGCAGCAGACC+TGG - chr1_1:59522925-59522944 None:intergenic 60.0%
GTTTGGGCACGCCAACTTGG+TGG + chr1_1:59523039-59523058 Msa0032430:CDS 60.0%
! TTGGGCACGCCAACTTGGTG+GGG + chr1_1:59523041-59523060 Msa0032430:CDS 60.0%
ATCTGCGGGGACTGTATGGG+AGG + chr1_1:59523920-59523939 Msa0032430:CDS 60.0%
TTGGCTGTTCCGACGTGGTG+AGG - chr1_1:59525448-59525467 None:intergenic 60.0%
GGCAGCTAGACTGCACTACC+GGG + chr1_1:59525734-59525753 Msa0032430:intron 60.0%
AGCTAGACTGCACTACCGGG+AGG + chr1_1:59525737-59525756 Msa0032430:intron 60.0%
ACTCAATGCAGGCGTCCACG+AGG + chr1_1:59526713-59526732 Msa0032430:intron 60.0%
CTCAATGCAGGCGTCCACGA+GGG + chr1_1:59526714-59526733 Msa0032430:intron 60.0%
GCCTGGAACACGAGGTACAG+AGG - chr1_1:59526952-59526971 None:intergenic 60.0%
ACGGAACTCCAGCTGCCGAA+GGG + chr1_1:59527046-59527065 Msa0032430:CDS 60.0%
GACACAGCAGATGAGGGGGG+TGG + chr1_1:59522031-59522050 Msa0032430:CDS 65.0%
GACGGAACTCCAGCTGCCGA+AGG + chr1_1:59527045-59527064 Msa0032430:CDS 65.0%
CGGAACTCCAGCTGCCGAAG+GGG + chr1_1:59527047-59527066 Msa0032430:CDS 65.0%
GCTGAAACCCCTTCGGCAGC+TGG - chr1_1:59527057-59527076 None:intergenic 65.0%
! CAGCAGCGGGCTCCTCACAA+TGG + chr1_1:59528057-59528076 Msa0032430:CDS 65.0%
! GGCACGCCAACTTGGTGGGG+AGG + chr1_1:59523044-59523063 Msa0032430:CDS 70.0%
TGCAGGCGTCCACGAGGGAC+TGG + chr1_1:59526719-59526738 Msa0032430:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 59520204 59529227 59520204 ID=Msa0032430;Name=Msa0032430
chr1_1 mRNA 59520204 59529227 59520204 ID=Msa0032430-mRNA-1;Parent=Msa0032430;Name=Msa0032430-mRNA-1;_AED=0.12;_eAED=0.12;_QI=116|1|1|1|0.94|0.89|19|264|964
chr1_1 exon 59520204 59520433 59520204 ID=Msa0032430-mRNA-1:exon:18377;Parent=Msa0032430-mRNA-1
chr1_1 exon 59520527 59520587 59520527 ID=Msa0032430-mRNA-1:exon:18378;Parent=Msa0032430-mRNA-1
chr1_1 exon 59520663 59520699 59520663 ID=Msa0032430-mRNA-1:exon:18379;Parent=Msa0032430-mRNA-1
chr1_1 exon 59521495 59521625 59521495 ID=Msa0032430-mRNA-1:exon:18380;Parent=Msa0032430-mRNA-1
chr1_1 exon 59521759 59521863 59521759 ID=Msa0032430-mRNA-1:exon:18381;Parent=Msa0032430-mRNA-1
chr1_1 exon 59521960 59522068 59521960 ID=Msa0032430-mRNA-1:exon:18382;Parent=Msa0032430-mRNA-1
chr1_1 exon 59522264 59522397 59522264 ID=Msa0032430-mRNA-1:exon:18383;Parent=Msa0032430-mRNA-1
chr1_1 exon 59522926 59523065 59522926 ID=Msa0032430-mRNA-1:exon:18384;Parent=Msa0032430-mRNA-1
chr1_1 exon 59523752 59523802 59523752 ID=Msa0032430-mRNA-1:exon:18385;Parent=Msa0032430-mRNA-1
chr1_1 exon 59523888 59523970 59523888 ID=Msa0032430-mRNA-1:exon:18386;Parent=Msa0032430-mRNA-1
chr1_1 exon 59524071 59524125 59524071 ID=Msa0032430-mRNA-1:exon:18387;Parent=Msa0032430-mRNA-1
chr1_1 exon 59524218 59524332 59524218 ID=Msa0032430-mRNA-1:exon:18388;Parent=Msa0032430-mRNA-1
chr1_1 exon 59526169 59526646 59526169 ID=Msa0032430-mRNA-1:exon:18389;Parent=Msa0032430-mRNA-1
chr1_1 exon 59526724 59526937 59526724 ID=Msa0032430-mRNA-1:exon:18390;Parent=Msa0032430-mRNA-1
chr1_1 exon 59527030 59527100 59527030 ID=Msa0032430-mRNA-1:exon:18391;Parent=Msa0032430-mRNA-1
chr1_1 exon 59527320 59527488 59527320 ID=Msa0032430-mRNA-1:exon:18392;Parent=Msa0032430-mRNA-1
chr1_1 exon 59527593 59527725 59527593 ID=Msa0032430-mRNA-1:exon:18393;Parent=Msa0032430-mRNA-1
chr1_1 exon 59527968 59528740 59527968 ID=Msa0032430-mRNA-1:exon:18394;Parent=Msa0032430-mRNA-1
chr1_1 exon 59529042 59529227 59529042 ID=Msa0032430-mRNA-1:exon:18395;Parent=Msa0032430-mRNA-1
chr1_1 five_prime_UTR 59520204 59520319 59520204 ID=Msa0032430-mRNA-1:five_prime_utr;Parent=Msa0032430-mRNA-1
chr1_1 CDS 59520320 59520433 59520320 ID=Msa0032430-mRNA-1:cds;Parent=Msa0032430-mRNA-1
chr1_1 CDS 59520527 59520587 59520527 ID=Msa0032430-mRNA-1:cds;Parent=Msa0032430-mRNA-1
chr1_1 CDS 59520663 59520699 59520663 ID=Msa0032430-mRNA-1:cds;Parent=Msa0032430-mRNA-1
chr1_1 CDS 59521495 59521625 59521495 ID=Msa0032430-mRNA-1:cds;Parent=Msa0032430-mRNA-1
chr1_1 CDS 59521759 59521863 59521759 ID=Msa0032430-mRNA-1:cds;Parent=Msa0032430-mRNA-1
chr1_1 CDS 59521960 59522068 59521960 ID=Msa0032430-mRNA-1:cds;Parent=Msa0032430-mRNA-1
chr1_1 CDS 59522264 59522397 59522264 ID=Msa0032430-mRNA-1:cds;Parent=Msa0032430-mRNA-1
chr1_1 CDS 59522926 59523065 59522926 ID=Msa0032430-mRNA-1:cds;Parent=Msa0032430-mRNA-1
chr1_1 CDS 59523752 59523802 59523752 ID=Msa0032430-mRNA-1:cds;Parent=Msa0032430-mRNA-1
chr1_1 CDS 59523888 59523970 59523888 ID=Msa0032430-mRNA-1:cds;Parent=Msa0032430-mRNA-1
chr1_1 CDS 59524071 59524125 59524071 ID=Msa0032430-mRNA-1:cds;Parent=Msa0032430-mRNA-1
chr1_1 CDS 59524218 59524332 59524218 ID=Msa0032430-mRNA-1:cds;Parent=Msa0032430-mRNA-1
chr1_1 CDS 59526169 59526646 59526169 ID=Msa0032430-mRNA-1:cds;Parent=Msa0032430-mRNA-1
chr1_1 CDS 59526724 59526937 59526724 ID=Msa0032430-mRNA-1:cds;Parent=Msa0032430-mRNA-1
chr1_1 CDS 59527030 59527100 59527030 ID=Msa0032430-mRNA-1:cds;Parent=Msa0032430-mRNA-1
chr1_1 CDS 59527320 59527488 59527320 ID=Msa0032430-mRNA-1:cds;Parent=Msa0032430-mRNA-1
chr1_1 CDS 59527593 59527725 59527593 ID=Msa0032430-mRNA-1:cds;Parent=Msa0032430-mRNA-1
chr1_1 CDS 59527968 59528662 59527968 ID=Msa0032430-mRNA-1:cds;Parent=Msa0032430-mRNA-1
chr1_1 three_prime_UTR 59528663 59528740 59528663 ID=Msa0032430-mRNA-1:three_prime_utr;Parent=Msa0032430-mRNA-1
chr1_1 three_prime_UTR 59529042 59529227 59529042 ID=Msa0032430-mRNA-1:three_prime_utr;Parent=Msa0032430-mRNA-1
Gene Sequence

>Msa0032430

ATGGGCAAGAAAAACAAAGCAATGAAGGAAAATAGCGACGACGGCACCGTTAAACAATGTCCGCCGTTAACACTCTTTGTTTCTAATTTACCCTATTCCTTCACTAACTCTCAGCTTGAACAAACTTTCAGTGAAGTTGGACCTGTTAGGCGCTGTTTCATGGTTACACAAAAGGGGTCTACACAACATCGTGGTTTTGGTTATGTTCAATTTGCTGTTGAGAAAGACGCTAACCAAGCCATTGAGCTGAAGAACGGTTCATTGGTTGGTGACCGGAAAATTGTAGTGAAGCACGCAATGCCTCGTCCTCCCCGTGAAAATCGAAGATCGAAACCGGATCAAGAGGGCAATGAAGGCGATCTCACACAATCAAAAAATGATGATAAAGACAGCGGATTATCTGGAGCAGAGAAGCCTGTTTCAGTTCCAAAAGAACCAAAGGAAGAAGAAGTGAAAGTTTTGGATAAACCGAAAAACTCAAGGAAGCCTGTGGAAATAAAAAAAGCAGCACTTTGTAATGACACAGCAGATGAGGGGGGTGGCTCAGAAAAACAGAAGGTTGCTAGAACTGTTATATTTGGTGGTCTCGTGAATTCTGCTATGGCCGAAGATGTTCACCGCCAAGCCAGAGAAATCGGCACTGTGTGTTCTATTAAGCATCCCCTTTCAAGGAATGATCTTCAGCAGCATGGTCTGCTGCAAGAAGGCTGTACTTTCAATGCTTCAGCTGTACTTTATACAAGTGTAAAATCAGCCCGTGCTTCTGTTGCAACATTGCATAAAAAAGAGATAGGAGGGGGAACTGTTTGGGCACGCCAACTTGGTGGGGAGGGAGCCAAGACTCAGAAATGGAAGCTTATTGTCAGAAACCTTCCTTTCAAGGCCAAAGAAAATGAAATAAGGGACGCATTTTCATCTGCGGGGACTGTATGGGAGGTATTCATTCCACAGAAGTCCGACACAGGTCTTTCAAAGGGTTTTGCATTTGTAAAATTCACCTGCAAGCAAGATGCTGAAAATGCGATTCGAAAACTCAATGGATCGAAGTTTGGGAGTCGTCTCATAGCTGTTGATTGGGCTGTTCCAAAAAAGATATTTAGTAGTGATACCAATGATGCTCCTGCTTCAGAGGAAGGACAACAAAAGGTGACAGATGAAGATGGTAGTACTACTACTGAGGATGATCTTGAGAATACTGACAAAGAATCTGATCAAGGAGATGATAGTGATATTGATAGTGTTGTGGAGGAAGATGTTCCTTCTGACGATGATTTTGACAAGGAAGCAGACATTGCAAGAAAAGTTCTTAACAACTTGATTACATCCTCTGCCAAAGACGAATCTGTAAATAACGATTCCGTGTCTTCTGAAGAAAAGAACAAGCCAAAATCCAAGGAAACTGTTAAGGGTGCAGATAGTAAAACATCTAAAGAGTCCGACAAGGTTTCAGATATTTCTAAGCCTGAAACTTCCAAGGAAACAGAAGTTGATTTGCACAGAACAGTTTTTATAACCAATCTTCCCTTTGAATTAGATACCGAAGAAGTGAAGCAACGGTTTTCTGCATTTGGTGAAGTAGAATATTTTGCTCCTGTTCTCCACCAAGTGACCAAGCGTCCACGAGGGACTGGTTTTCTTAAGTTTAAAACCGCGGAAGCAGCTGATAATGCAATTTCAACTGCCAATACTGCTTCTGGGATGGGTATTTTGGTAAGGGGTAGACCATTAAAGGTTTTAAAGGCTCTGGACAAGAAATCGGCTCATGACAAGGAACAGGAGAAAGAAAAAAATGAAGTTCAAGACCACCGCAATCTTTACTTGGCGAAGGAGGGACTTATTCTTGACGGAACTCCAGCTGCCGAAGGGGTTTCAGCCACTGATATGTCAAAACGCAAAAATTTGGAAAGGAAAAAGAAGACGAAGCTTCAATCTCCAAATTTTCATGTTTCAAAAACTAGACTTGTTATCTACAACTTACCAAAGTCAATGACTGAAAAACAACTTAAGACGCTTTGCATTGATGCAGTCATCTCTAGAGCTACCAAGCAAATACCTGTAATTCGGCAGATAAAGATTTTGAAAGATGGCAGGAAAGGAAAGGCTACTCAAGAACAGCAGTATTCCCGTGGAGTCGCTTTTCTTGAATTTTCAGAGCATCAACATGCTCTTGTTGCTTTGAGAGTTCTTAACAATAATCCTGAAACCTTTGGTCCTGAACATCGGCCAATTGTGGAGTTTGCTCTTGATAATATCCAGAAATTGAAACTTCGTAACGAAAAGCTACAGTATCAGCAGCGGGCTCCTCACAATGGCAACAGCAGAAACGAAAATGATAAACCCGACAATGCGGGAGTTTACGCACATGGAACTGACAGAAAACGAAAATCTCGAGAGCATGACAAACCAGCAAAAGACTTGGCACCAGATTCAAATAGTGAACACGGTGGTAGAGTGCCAAATGGAAAATCTCCTCAAGGAGGCAAATCCAAAAGACAGAAAGGGGACCCCAAGAGTACAAATACCGAAGTGATCTCATCGAAAGAAAGTCCAAAAGCTTCTTCGGAAAGGAAGCTAAAAAATAACCAAGATGGCCAGAATCATGGTGCTAAATTACATGAAGGTAAAAATAGTTCCATTGACAGTAATAGGAAAATATCAGGTAAGAAAGAAGACGCAGTATTTGGAAAGAGGAAGATGCATAACCAAGAACAAGCAGGGGAAAAGGTTTCTAGGAAAAGGCCAAAGAAGAACAAAGATTCAGTAGGGAAGGACACAGTAGATAAGCTTGACATGCTTATAGAACAATATAGATCCAAGTTCTCACACAAGGGTTCTCAAGGAAATGACGGCGAGAAAAAACAATCTAAACAGCTTAGGAAATGGTTCCAATCATAA
Protein sequence

>Msa0032430

MGKKNKAMKENSDDGTVKQCPPLTLFVSNLPYSFTNSQLEQTFSEVGPVRRCFMVTQKGSTQHRGFGYVQFAVEKDANQAIELKNGSLVGDRKIVVKHAMPRPPRENRRSKPDQEGNEGDLTQSKNDDKDSGLSGAEKPVSVPKEPKEEEVKVLDKPKNSRKPVEIKKAALCNDTADEGGGSEKQKVARTVIFGGLVNSAMAEDVHRQAREIGTVCSIKHPLSRNDLQQHGLLQEGCTFNASAVLYTSVKSARASVATLHKKEIGGGTVWARQLGGEGAKTQKWKLIVRNLPFKAKENEIRDAFSSAGTVWEVFIPQKSDTGLSKGFAFVKFTCKQDAENAIRKLNGSKFGSRLIAVDWAVPKKIFSSDTNDAPASEEGQQKVTDEDGSTTTEDDLENTDKESDQGDDSDIDSVVEEDVPSDDDFDKEADIARKVLNNLITSSAKDESVNNDSVSSEEKNKPKSKETVKGADSKTSKESDKVSDISKPETSKETEVDLHRTVFITNLPFELDTEEVKQRFSAFGEVEYFAPVLHQVTKRPRGTGFLKFKTAEAADNAISTANTASGMGILVRGRPLKVLKALDKKSAHDKEQEKEKNEVQDHRNLYLAKEGLILDGTPAAEGVSATDMSKRKNLERKKKTKLQSPNFHVSKTRLVIYNLPKSMTEKQLKTLCIDAVISRATKQIPVIRQIKILKDGRKGKATQEQQYSRGVAFLEFSEHQHALVALRVLNNNPETFGPEHRPIVEFALDNIQKLKLRNEKLQYQQRAPHNGNSRNENDKPDNAGVYAHGTDRKRKSREHDKPAKDLAPDSNSEHGGRVPNGKSPQGGKSKRQKGDPKSTNTEVISSKESPKASSERKLKNNQDGQNHGAKLHEGKNSSIDSNRKISGKKEDAVFGKRKMHNQEQAGEKVSRKRPKKNKDSVGKDTVDKLDMLIEQYRSKFSHKGSQGNDGEKKQSKQLRKWFQS*