AlfalfaGEDB | Msa0547960

M. sativa cultivar zhongmu-4 / Msa0547960

KEGG: K09422
GO: GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0008150 GO:0009719 GO:0009723 GO:0009725 GO:0009739 GO:0009751 GO:0009753 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0014070 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0033993 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0046677 GO:0046686 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0547960	AES88815.1	98.419	253	4	0	1	253	1	253	0.0	520

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0547960	sp\|Q9LX82\|MYB48_ARATH	54.902	255	93	8	1	242	1	246	2.30e-78	239

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0547960	G7JTP3	98.419	253	4	0	1	253	1	253	0.0	520

TFs/TRs:

Gene ID	Type	Classification
Msa0547960	TF	MYB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0051200	Msa0547960	0.815584	8.577980e-52	-8.615850e-47
Msa0051460	Msa0547960	0.809952	1.467350e-50	-8.615850e-47
Msa0101840	Msa0547960	0.827060	1.926894e-54	-8.615850e-47
Msa0143920	Msa0547960	0.807191	5.702191e-50	-8.615850e-47
Msa0204210	Msa0547960	0.818104	2.332350e-52	-8.615850e-47
Msa0438050	Msa0547960	0.800284	1.549020e-48	-8.615850e-47
Msa0547960	Msa0602940	0.965472	1.195255e-124	-8.615850e-47
Msa0547960	Msa0644000	0.901844	1.775202e-78	-8.615850e-47
Msa0547960	Msa0776030	0.819070	1.408747e-52	-8.615850e-47
Msa0547960	Msa1246040	0.812682	3.749536e-51	-8.615850e-47
Msa0547960	Msa1377070	0.814361	1.602140e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0547960	MtrunA17_Chr4g0030881	95.769	260	4	1	1	253	1	260	0.0	514
Msa0547960	MtrunA17_Chr2g0327821	59.231	260	62	12	1	243	1	233	7.15e-86	255
Msa0547960	MtrunA17_Chr1g0168661	65.455	110	38	0	1	110	15	124	1.69e-51	168
Msa0547960	MtrunA17_Chr1g0186061	61.818	110	42	0	1	110	14	123	1.51e-48	160
Msa0547960	MtrunA17_Chr1g0209661	63.208	106	39	0	8	113	28	133	2.28e-48	162
Msa0547960	MtrunA17_Chr1g0194301	58.974	117	45	1	2	115	25	141	3.66e-47	158
Msa0547960	MtrunA17_Chr7g0228231	60.377	106	42	0	8	113	15	120	1.42e-45	151
Msa0547960	MtrunA17_Chr6g0450101	60.377	106	42	0	8	113	15	120	1.61e-45	151
Msa0547960	MtrunA17_Chr1g0180391	63.107	103	38	0	8	110	20	122	4.18e-45	151
Msa0547960	MtrunA17_Chr1g0194291	60.185	108	43	0	8	115	22	129	5.02e-44	149
Msa0547960	MtrunA17_Chr4g0057031	61.165	103	40	0	8	110	13	115	1.87e-41	143
Msa0547960	MtrunA17_Chr3g0131121	57.009	107	46	0	4	110	9	115	3.82e-40	140
Msa0547960	MtrunA17_Chr4g0055981	44.371	151	75	2	3	153	51	192	4.29e-40	138
Msa0547960	MtrunA17_Chr5g0410961	59.223	103	42	0	8	110	13	115	7.42e-40	140
Msa0547960	MtrunA17_Chr5g0434571	51.587	126	57	1	8	129	49	174	1.08e-39	140
Msa0547960	MtrunA17_Chr3g0115821	56.604	106	46	0	8	113	13	118	2.45e-39	139
Msa0547960	MtrunA17_Chr8g0346561	52.500	120	55	1	9	128	14	131	2.84e-39	138
Msa0547960	MtrunA17_Chr7g0275911	57.843	102	43	0	9	110	14	115	3.56e-39	136
Msa0547960	MtrunA17_Chr3g0110351	59.223	103	42	0	8	110	13	115	3.58e-39	138
Msa0547960	MtrunA17_Chr1g0211161	54.206	107	49	0	8	114	14	120	5.44e-39	135
Msa0547960	MtrunA17_Chr4g0037141	50.000	136	64	2	7	139	12	146	6.77e-39	136
Msa0547960	MtrunA17_Chr4g0048511	56.311	103	45	0	8	110	14	116	8.71e-39	138
Msa0547960	MtrunA17_Chr3g0117091	54.206	107	49	0	8	114	13	119	1.07e-38	137
Msa0547960	MtrunA17_Chr4g0042671	46.000	150	78	1	8	154	13	162	1.22e-38	139
Msa0547960	MtrunA17_Chr1g0187761	48.507	134	63	1	8	135	13	146	1.29e-38	135
Msa0547960	MtrunA17_Chr2g0323411	56.311	103	45	0	8	110	13	115	2.37e-38	136
Msa0547960	MtrunA17_Chr2g0281071	57.282	103	44	0	8	110	14	116	2.89e-38	136
Msa0547960	MtrunA17_Chr2g0293911	58.333	108	45	0	8	115	25	132	3.22e-38	136
Msa0547960	MtrunA17_Chr4g0068921	57.407	108	46	0	8	115	25	132	3.67e-38	132
Msa0547960	MtrunA17_Chr2g0330041	53.398	103	48	0	8	110	13	115	3.95e-38	137
Msa0547960	MtrunA17_Chr8g0349261	57.692	104	43	1	8	110	14	117	4.51e-38	135
Msa0547960	MtrunA17_Chr5g0435101	55.882	102	45	0	9	110	13	114	4.80e-38	132
Msa0547960	MtrunA17_Chr7g0261281	49.180	122	62	0	8	129	13	134	5.13e-38	134
Msa0547960	MtrunA17_Chr4g0044421	56.863	102	44	0	9	110	14	115	5.61e-38	131
Msa0547960	MtrunA17_Chr7g0274581	54.369	103	47	0	8	110	13	115	6.00e-38	132
Msa0547960	MtrunA17_Chr7g0228891	56.311	103	45	0	8	110	13	115	8.13e-38	133
Msa0547960	MtrunA17_Chr3g0121241	56.311	103	45	0	8	110	43	145	9.80e-38	134
Msa0547960	MtrunA17_Chr8g0385321	54.808	104	47	0	7	110	12	115	1.15e-37	134
Msa0547960	MtrunA17_Chr1g0193371	55.660	106	47	0	8	113	13	118	1.24e-37	135
Msa0547960	MtrunA17_Chr1g0167691	55.340	103	46	0	8	110	13	115	1.24e-37	132
Msa0547960	MtrunA17_Chr4g0022901	56.311	103	45	0	8	110	14	116	2.03e-37	132
Msa0547960	MtrunA17_Chr4g0032401	51.724	116	56	0	8	123	18	133	2.09e-37	134
Msa0547960	MtrunA17_Chr4g0039971	54.717	106	48	0	8	113	14	119	2.24e-37	134
Msa0547960	MtrunA17_Chr4g0022931	56.311	103	45	0	8	110	14	116	2.28e-37	132
Msa0547960	MtrunA17_Chr7g0217741	56.311	103	45	0	8	110	13	115	2.84e-37	133
Msa0547960	MtrunA17_Chr7g0270891	56.075	107	47	0	8	114	13	119	3.09e-37	134
Msa0547960	MtrunA17_Chr5g0395281	53.774	106	49	0	8	113	13	118	3.85e-37	132
Msa0547960	MtrunA17_Chr3g0088461	57.282	103	44	0	8	110	23	125	4.16e-37	133
Msa0547960	MtrunA17_Chr2g0328771	51.639	122	57	1	8	127	21	142	4.28e-37	132
Msa0547960	MtrunA17_Chr4g0070611	49.593	123	58	1	2	120	7	129	7.12e-37	132
Msa0547960	MtrunA17_Chr2g0323351	48.780	123	63	0	8	130	13	135	9.44e-37	130
Msa0547960	MtrunA17_Chr8g0342541	52.427	103	49	0	8	110	13	115	1.02e-36	132
Msa0547960	MtrunA17_Chr2g0311221	57.576	99	42	0	8	106	15	113	1.23e-36	132
Msa0547960	MtrunA17_Chr4g0068061	56.311	103	45	0	8	110	13	115	1.37e-36	132
Msa0547960	MtrunA17_Chr4g0022881	54.369	103	47	0	7	109	12	114	1.40e-36	129
Msa0547960	MtrunA17_Chr4g0070641	53.211	109	51	0	2	110	7	115	1.41e-36	127
Msa0547960	MtrunA17_Chr1g0203411	47.368	133	65	2	8	137	13	143	1.75e-36	130
Msa0547960	MtrunA17_Chr1g0167661	40.761	184	102	4	8	191	13	189	1.90e-36	129
Msa0547960	MtrunA17_Chr6g0470971	51.852	108	52	0	8	115	15	122	2.35e-36	130
Msa0547960	MtrunA17_Chr1g0193801	54.206	107	49	0	8	114	13	119	2.49e-36	132
Msa0547960	MtrunA17_Chr8g0342481	51.818	110	52	1	2	110	7	116	2.51e-36	132
Msa0547960	MtrunA17_Chr8g0342521	53.398	103	48	0	8	110	13	115	2.55e-36	131
Msa0547960	MtrunA17_Chr4g0058631	54.206	107	49	0	8	114	13	119	2.92e-36	131
Msa0547960	MtrunA17_Chr6g0453471	46.377	138	68	1	8	139	13	150	4.52e-36	131
Msa0547960	MtrunA17_Chr3g0103281	54.369	103	47	0	8	110	13	115	5.67e-36	130
Msa0547960	MtrunA17_Chr4g0022911	54.369	103	47	0	8	110	14	116	5.94e-36	129
Msa0547960	MtrunA17_Chr2g0309911	48.624	109	56	0	2	110	6	114	6.11e-36	129
Msa0547960	MtrunA17_Chr3g0080861	55.238	105	47	0	6	110	36	140	6.63e-36	133
Msa0547960	MtrunA17_Chr1g0154031	40.217	184	89	6	8	191	77	239	9.66e-36	131
Msa0547960	MtrunA17_Chr1g0203441	52.830	106	50	0	8	113	14	119	1.20e-35	128
Msa0547960	MtrunA17_Chr8g0387421	51.376	109	53	0	2	110	7	115	1.60e-35	129
Msa0547960	MtrunA17_Chr3g0099131	51.887	106	51	0	8	113	42	147	1.60e-35	132
Msa0547960	MtrunA17_Chr8g0354661	53.333	105	49	0	6	110	36	140	3.27e-35	132
Msa0547960	MtrunA17_Chr6g0452271	53.398	103	48	0	8	110	13	115	4.71e-35	128
Msa0547960	MtrunA17_Chr7g0271241	57.732	97	41	0	8	104	13	109	1.12e-34	127
Msa0547960	MtrunA17_Chr8g0343831	52.941	102	48	0	9	110	10	111	1.58e-34	124
Msa0547960	MtrunA17_Chr5g0397231	37.433	187	115	2	2	188	7	191	2.48e-34	126
Msa0547960	MtrunA17_Chr2g0322521	55.660	106	46	1	8	112	30	135	4.59e-34	126
Msa0547960	MtrunA17_Chr7g0254411	41.611	149	87	0	8	156	13	161	6.25e-34	125
Msa0547960	MtrunA17_Chr1g0194951	52.427	103	49	0	8	110	13	115	8.23e-34	125
Msa0547960	MtrunA17_Chr1g0151941	43.972	141	75	2	4	140	9	149	9.39e-34	122
Msa0547960	MtrunA17_Chr4g0022891	43.182	132	73	2	8	137	13	144	1.07e-33	122
Msa0547960	MtrunA17_Chr7g0217221	51.402	107	52	0	4	110	9	115	1.43e-33	122
Msa0547960	MtrunA17_Chr7g0247131	67.123	73	24	0	38	110	9	81	1.93e-32	119
Msa0547960	MtrunA17_Chr1g0192411	51.456	103	50	0	8	110	13	115	2.38e-32	122
Msa0547960	MtrunA17_Chr3g0092401	50.485	103	51	0	8	110	14	116	2.86e-32	120
Msa0547960	MtrunA17_Chr8g0360111	50.000	100	50	0	8	107	26	125	1.15e-31	117
Msa0547960	MtrunA17_Chr4g0060721	49.515	103	52	0	8	110	14	116	2.15e-31	118
Msa0547960	MtrunA17_Chr5g0417821	49.515	103	52	0	8	110	8	110	2.92e-31	117
Msa0547960	MtrunA17_Chr5g0434931	49.515	103	52	0	8	110	36	138	3.25e-31	116
Msa0547960	MtrunA17_Chr7g0240821	48.000	100	52	0	11	110	5	104	4.01e-31	115
Msa0547960	MtrunA17_Chr3g0135311	41.781	146	79	2	8	147	13	158	4.69e-31	117
Msa0547960	MtrunA17_Chr5g0434911	48.544	103	53	0	8	110	22	124	8.63e-31	115
Msa0547960	MtrunA17_Chr5g0441131	36.747	166	91	3	7	171	9	161	2.78e-30	111
Msa0547960	MtrunA17_Chr5g0434831	49.515	103	52	0	8	110	8	110	2.95e-30	111
Msa0547960	MtrunA17_Chr7g0269831	53.398	103	48	0	8	110	13	115	2.99e-30	115
Msa0547960	MtrunA17_Chr8g0334881	52.294	109	49	2	4	111	7	113	3.22e-30	114
Msa0547960	MtrunA17_Chr6g0453211	49.515	103	52	0	4	106	9	111	3.85e-30	114
Msa0547960	MtrunA17_Chr4g0008551	47.273	110	55	2	9	117	38	145	7.52e-30	114
Msa0547960	MtrunA17_Chr7g0264641	48.077	104	53	1	8	110	13	116	1.22e-29	112
Msa0547960	MtrunA17_Chr4g0013361	33.761	234	133	8	8	235	11	228	1.70e-29	112
Msa0547960	MtrunA17_Chr1g0152011	49.038	104	52	1	8	110	13	116	1.96e-29	113
Msa0547960	MtrunA17_Chr7g0220341	45.299	117	60	2	8	120	26	142	2.44e-29	111
Msa0547960	MtrunA17_Chr5g0434841	47.573	103	54	0	8	110	21	123	2.53e-29	112
Msa0547960	MtrunA17_Chr7g0228991	47.573	103	54	0	8	110	30	132	2.60e-29	111
Msa0547960	MtrunA17_Chr5g0440781	46.154	104	55	1	7	109	12	115	3.72e-29	108
Msa0547960	MtrunA17_Chr5g0400821	48.113	106	50	2	8	110	13	116	3.81e-29	111
Msa0547960	MtrunA17_Chr5g0440761	35.849	159	85	4	7	164	12	154	8.07e-29	110
Msa0547960	MtrunA17_Chr5g0441141	35.849	159	85	4	7	164	12	154	8.40e-29	110
Msa0547960	MtrunA17_Chr5g0429661	44.882	127	65	3	3	126	116	240	2.89e-28	110
Msa0547960	MtrunA17_Chr4g0028311	47.115	104	54	1	8	110	13	116	2.94e-28	109
Msa0547960	MtrunA17_Chr2g0327351	48.485	99	50	1	8	105	13	111	3.41e-28	109
Msa0547960	MtrunA17_Chr4g0053431	44.660	103	54	2	9	110	5	105	9.35e-28	107
Msa0547960	MtrunA17_Chr5g0401731	47.059	102	53	1	9	110	15	115	1.42e-27	107
Msa0547960	MtrunA17_Chr4g0054391	49.485	97	48	1	8	103	13	109	1.59e-27	107
Msa0547960	MtrunA17_Chr6g0454921	46.078	102	54	1	9	110	15	115	2.03e-27	104
Msa0547960	MtrunA17_Chr6g0487491	38.028	142	76	3	8	140	13	151	3.06e-27	105
Msa0547960	MtrunA17_Chr7g0238631	49.020	102	51	1	9	110	113	213	4.19e-27	109
Msa0547960	MtrunA17_Chr7g0238631	37.000	100	61	2	9	107	61	159	1.91e-13	69.7
Msa0547960	MtrunA17_Chr4g0072751	48.485	99	50	1	8	105	13	111	5.32e-27	107
Msa0547960	MtrunA17_Chr3g0133601	44.660	103	54	2	9	110	37	137	7.22e-26	101
Msa0547960	MtrunA17_Chr5g0417621	49.533	107	50	3	9	113	134	238	1.05e-25	104
Msa0547960	MtrunA17_Chr4g0042501	45.217	115	59	3	5	117	101	213	1.42e-25	103
Msa0547960	MtrunA17_Chr7g0228531	45.133	113	60	2	9	121	220	330	2.10e-24	100
Msa0547960	MtrunA17_Chr3g0099141	48.148	81	42	0	8	88	41	121	4.12e-24	94.4
Msa0547960	MtrunA17_Chr5g0437321	46.000	100	51	2	9	107	19	116	4.90e-24	97.8
Msa0547960	MtrunA17_Chr4g0058991	44.340	106	56	2	6	110	206	309	5.07e-24	100
Msa0547960	MtrunA17_Chr2g0323321	52.500	80	38	0	8	87	12	91	9.67e-24	92.4
Msa0547960	MtrunA17_Chr6g0480581	40.299	134	78	2	9	141	4	136	2.00e-23	95.1
Msa0547960	MtrunA17_Chr7g0229101	56.338	71	31	0	38	108	3	73	2.35e-23	94.0
Msa0547960	MtrunA17_Chr5g0397841	36.571	175	103	3	9	176	110	283	3.68e-23	97.8
Msa0547960	MtrunA17_Chr3g0117511	42.056	107	61	1	9	115	183	288	4.18e-23	97.4
Msa0547960	MtrunA17_Chr8g0342511	50.667	75	37	0	8	82	13	87	5.44e-23	90.1
Msa0547960	MtrunA17_Chr4g0042611	51.316	76	37	0	8	83	13	88	6.58e-23	89.4
Msa0547960	MtrunA17_Chr8g0342471	48.810	84	42	1	2	84	7	90	7.51e-23	90.9
Msa0547960	MtrunA17_Chr3g0139671	41.748	103	57	2	9	110	85	185	1.22e-22	96.7
Msa0547960	MtrunA17_Chr3g0139671	34.314	102	65	2	7	107	31	131	8.11e-12	65.1
Msa0547960	MtrunA17_Chr8g0342461	47.619	84	43	1	2	84	7	90	3.12e-22	89.4
Msa0547960	MtrunA17_Chr7g0229131	48.780	82	42	0	38	119	3	84	3.44e-22	90.1
Msa0547960	MtrunA17_Chr5g0395221	51.316	76	37	0	8	83	13	88	4.53e-22	87.0
Msa0547960	MtrunA17_Chr6g0460661	40.566	106	58	3	9	113	16	117	4.76e-22	89.4
Msa0547960	MtrunA17_Chr3g0125801	47.706	109	53	3	9	115	16	122	5.46e-22	92.4
Msa0547960	MtrunA17_Chr8g0342531	49.351	77	39	0	8	84	13	89	5.46e-22	89.4
Msa0547960	MtrunA17_Chr6g0460671	41.818	110	61	2	5	113	95	202	6.94e-22	92.8
Msa0547960	MtrunA17_Chr1g0157731	40.777	103	58	2	9	110	91	191	1.56e-21	93.6
Msa0547960	MtrunA17_Chr1g0157731	35.294	102	64	2	7	107	37	137	1.64e-12	67.0
Msa0547960	MtrunA17_Chr2g0294811	46.250	80	43	0	8	87	13	92	4.37e-21	85.5
Msa0547960	MtrunA17_Chr5g0434901	53.521	71	33	0	38	108	4	74	5.74e-21	85.1
Msa0547960	MtrunA17_Chr3g0093811	51.316	76	37	0	38	113	13	88	7.57e-21	88.6
Msa0547960	MtrunA17_Chr7g0254261	42.342	111	60	3	5	113	85	193	7.67e-21	90.1
Msa0547960	MtrunA17_Chr5g0425591	44.578	83	45	1	7	88	9	91	1.01e-19	81.3
Msa0547960	MtrunA17_Chr6g0453751	44.444	90	41	2	8	88	21	110	1.34e-19	82.0
Msa0547960	MtrunA17_Chr7g0228481	41.593	113	64	2	9	121	220	330	1.84e-19	87.0
Msa0547960	MtrunA17_Chr7g0238651	35.849	106	66	1	12	115	10	115	1.65e-18	83.6
Msa0547960	MtrunA17_Chr7g0228401	43.750	96	53	1	20	115	290	384	2.43e-18	84.0
Msa0547960	MtrunA17_Chr5g0416341	40.196	102	59	2	12	113	29	128	4.04e-18	83.2
Msa0547960	MtrunA17_Chr7g0233061	34.862	109	68	2	9	117	180	285	8.28e-17	79.0
Msa0547960	MtrunA17_Chr8g0362231	39.216	102	60	2	12	113	25	124	2.93e-16	77.8
Msa0547960	MtrunA17_Chr1g0177901	32.075	159	82	5	20	154	5	161	4.25e-16	74.7
Msa0547960	MtrunA17_Chr5g0434871	57.143	42	18	0	69	110	2	43	3.11e-12	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0547960	AT3G46130.1	54.902	255	93	8	1	242	3	248	2.28e-79	240
Msa0547960	AT5G59780.3	60.435	230	74	7	2	230	3	216	2.92e-79	239
Msa0547960	AT5G59780.2	57.812	192	64	7	40	230	20	195	1.76e-57	182
Msa0547960	AT3G46130.3	52.336	214	88	6	38	242	8	216	4.10e-57	182
Msa0547960	AT3G46130.4	51.389	216	83	8	40	242	20	226	1.32e-56	181
Msa0547960	AT3G24310.1	69.903	103	31	0	8	110	19	121	3.63e-50	166
Msa0547960	AT4G13480.1	66.355	107	36	0	4	110	3	109	7.04e-50	164
Msa0547960	AT3G53200.1	64.815	108	38	0	4	111	6	113	3.31e-49	162
Msa0547960	AT3G30210.1	43.363	226	98	5	8	227	28	229	7.88e-49	162
Msa0547960	AT3G27810.1	53.285	137	62	1	8	144	21	155	6.45e-48	158
Msa0547960	AT5G40350.1	39.631	217	106	3	8	224	18	209	1.81e-47	157
Msa0547960	AT1G25340.1	63.208	106	39	0	8	113	19	124	6.42e-47	157
Msa0547960	AT1G68320.1	62.264	106	40	0	8	113	20	125	2.41e-46	156
Msa0547960	AT2G47190.1	64.078	103	37	0	8	110	21	123	6.99e-46	154
Msa0547960	AT1G48000.1	59.804	102	41	0	8	109	33	134	6.35e-44	149
Msa0547960	AT3G01530.1	42.197	173	89	3	8	173	26	194	3.01e-43	145
Msa0547960	AT1G79180.1	46.053	152	75	1	8	159	15	159	1.74e-42	146
Msa0547960	AT1G25340.2	60.377	106	37	1	8	113	19	119	3.29e-42	145
Msa0547960	AT1G25340.3	60.377	106	37	1	8	113	19	119	6.95e-42	145
Msa0547960	AT5G10280.1	57.547	106	45	0	8	113	13	118	1.02e-40	143
Msa0547960	AT2G31180.1	56.604	106	46	0	8	113	13	118	1.80e-40	140
Msa0547960	AT4G12350.1	59.048	105	43	0	6	110	11	115	4.74e-40	140
Msa0547960	AT1G66230.1	61.165	103	40	0	8	110	13	115	7.57e-40	139
Msa0547960	AT1G06180.1	57.282	103	44	0	8	110	13	115	1.17e-39	138
Msa0547960	AT3G06490.1	57.407	108	46	0	8	115	20	127	2.54e-39	139
Msa0547960	AT5G16770.4	58.491	106	44	0	8	113	13	118	3.65e-39	139
Msa0547960	AT5G16770.3	58.491	106	44	0	8	113	13	118	3.65e-39	139
Msa0547960	AT4G22680.1	59.223	103	42	0	8	110	13	115	3.67e-39	137
Msa0547960	AT5G16770.1	58.491	106	44	0	8	113	13	118	5.98e-39	138
Msa0547960	AT5G16770.2	58.491	106	44	0	8	113	13	118	5.98e-39	138
Msa0547960	AT5G52600.1	42.169	166	95	1	8	172	13	178	7.12e-39	134
Msa0547960	AT4G38620.1	56.731	104	45	0	7	110	12	115	8.42e-39	137
Msa0547960	AT3G02940.2	58.491	106	44	0	8	113	13	118	8.84e-39	137
Msa0547960	AT4G05100.1	57.282	103	44	0	8	110	14	116	9.17e-39	137
Msa0547960	AT5G59780.1	53.293	167	61	7	65	230	1	151	9.90e-39	133
Msa0547960	AT3G01140.2	49.275	138	63	2	8	138	13	150	1.15e-38	138
Msa0547960	AT1G16490.1	42.308	156	89	1	8	163	15	169	1.26e-38	136
Msa0547960	AT4G21440.1	47.552	143	67	2	8	145	13	152	1.32e-38	138
Msa0547960	AT5G65230.1	54.717	106	48	0	8	113	13	118	1.41e-38	137
Msa0547960	AT4G28110.1	56.311	103	45	0	8	110	13	115	1.68e-38	135
Msa0547960	AT3G02940.1	58.491	106	44	0	8	113	13	118	1.71e-38	137
Msa0547960	AT3G02940.3	58.491	106	44	0	8	113	13	118	1.71e-38	137
Msa0547960	AT5G16600.1	60.194	103	41	0	8	110	13	115	2.05e-38	137
Msa0547960	AT4G17785.2	56.604	106	46	0	8	113	14	119	2.12e-38	137
Msa0547960	AT5G14750.1	47.101	138	67	2	8	139	17	154	2.28e-38	133
Msa0547960	AT3G01140.1	49.275	138	63	2	8	138	56	193	2.59e-38	138
Msa0547960	AT4G17785.1	56.604	106	46	0	8	113	14	119	2.61e-38	137
Msa0547960	AT3G13540.1	56.075	107	47	0	8	114	24	130	4.85e-38	134
Msa0547960	AT3G23250.1	49.254	134	67	1	8	141	13	145	5.24e-38	134
Msa0547960	AT3G48920.1	51.538	130	58	1	1	125	12	141	6.16e-38	134
Msa0547960	AT3G13890.2	54.369	103	47	0	8	110	13	115	6.54e-38	136
Msa0547960	AT3G46130.2	46.597	191	80	8	65	242	1	182	7.45e-38	131
Msa0547960	AT1G09540.1	56.604	106	46	0	8	113	13	118	7.98e-38	136
Msa0547960	AT5G54230.1	57.282	103	44	0	8	110	13	115	8.44e-38	135
Msa0547960	AT5G26660.1	56.311	103	45	0	8	110	13	115	1.03e-37	135
Msa0547960	AT5G49620.1	56.481	108	47	0	8	115	27	134	1.45e-37	134
Msa0547960	AT4G26930.1	51.852	108	52	0	6	113	18	125	1.90e-37	135
Msa0547960	AT2G32460.2	56.604	106	45	1	8	112	7	112	2.25e-37	137
Msa0547960	AT2G32460.1	56.604	106	45	1	8	112	19	124	2.45e-37	137
Msa0547960	AT5G14340.1	57.282	103	44	0	8	110	25	127	2.52e-37	132
Msa0547960	AT1G35515.1	57.843	102	43	0	9	110	14	115	2.66e-37	130
Msa0547960	AT2G26960.1	44.231	156	83	2	9	164	22	173	3.28e-37	135
Msa0547960	AT4G34990.1	48.837	129	64	1	7	135	12	138	3.38e-37	132
Msa0547960	AT3G27810.2	40.000	170	71	4	40	178	4	173	4.91e-37	129
Msa0547960	AT2G16720.1	55.882	102	45	0	9	110	14	115	5.05e-37	132
Msa0547960	AT5G40350.2	39.459	185	87	3	40	224	5	164	6.19e-37	128
Msa0547960	AT4G09460.1	54.808	104	47	0	7	110	12	115	6.56e-37	130
Msa0547960	AT1G34670.1	54.717	106	48	0	8	113	13	118	6.66e-37	134
Msa0547960	AT1G57560.2	55.340	103	46	0	8	110	13	115	6.69e-37	131
Msa0547960	AT1G57560.1	55.340	103	46	0	8	110	13	115	8.71e-37	132
Msa0547960	AT3G61250.1	56.311	103	45	0	8	110	13	115	8.77e-37	132
Msa0547960	AT5G40330.1	56.311	103	45	0	8	110	13	115	9.36e-37	129
Msa0547960	AT1G79180.2	36.444	225	90	6	8	182	15	236	1.04e-36	132
Msa0547960	AT5G62320.1	56.364	110	41	1	8	110	14	123	1.14e-36	130
Msa0547960	AT5G15310.4	45.890	146	75	2	8	153	13	154	1.18e-36	130
Msa0547960	AT5G15310.2	45.890	146	75	2	8	153	13	154	1.40e-36	132
Msa0547960	AT4G01680.3	56.311	103	45	0	8	110	13	115	1.49e-36	129
Msa0547960	AT5G15310.1	45.890	146	75	2	8	153	13	154	1.50e-36	132
Msa0547960	AT1G22640.1	55.882	102	45	0	9	110	14	115	1.69e-36	130
Msa0547960	AT1G18570.1	47.183	142	66	3	8	142	14	153	1.70e-36	132
Msa0547960	AT5G12870.1	56.311	103	45	0	8	110	19	121	1.73e-36	130
Msa0547960	AT3G08500.1	58.252	103	43	0	8	110	31	133	1.87e-36	132
Msa0547960	AT4G01680.1	56.311	103	45	0	8	110	13	115	3.61e-36	131
Msa0547960	AT2G47460.1	57.282	103	44	0	8	110	13	115	4.28e-36	132
Msa0547960	AT5G56110.1	54.206	107	49	0	4	110	9	115	4.30e-36	130
Msa0547960	AT5G07690.1	48.819	127	61	1	8	130	13	139	5.21e-36	130
Msa0547960	AT1G56160.1	52.427	103	49	0	8	110	15	117	6.47e-36	129
Msa0547960	AT5G60890.1	49.550	111	56	0	4	114	9	119	1.33e-35	129
Msa0547960	AT3G28470.1	57.143	98	42	0	8	105	13	110	1.42e-35	129
Msa0547960	AT5G55020.1	53.846	104	48	0	6	109	25	128	1.49e-35	132
Msa0547960	AT3G27920.1	44.853	136	65	1	8	133	15	150	1.56e-35	127
Msa0547960	AT3G62610.1	54.369	103	47	0	8	110	13	115	3.54e-35	129
Msa0547960	AT3G12820.1	51.456	103	50	0	8	110	15	117	3.56e-35	126
Msa0547960	AT4G25560.1	52.830	106	50	0	5	110	8	113	4.41e-35	127
Msa0547960	AT5G61420.2	51.402	107	52	0	8	114	13	119	4.85e-35	129
Msa0547960	AT5G07700.1	53.398	103	48	0	8	110	13	115	5.83e-35	128
Msa0547960	AT5G07700.2	53.398	103	48	0	8	110	13	115	5.83e-35	128
Msa0547960	AT1G63910.1	45.238	126	66	1	2	124	7	132	6.10e-35	129
Msa0547960	AT3G13890.1	50.000	112	47	1	8	110	13	124	7.90e-35	128
Msa0547960	AT5G52260.1	48.438	128	63	1	8	132	13	140	8.54e-35	125
Msa0547960	AT1G66370.1	47.619	126	63	1	8	130	9	134	1.80e-34	124
Msa0547960	AT1G74430.1	50.467	107	53	0	8	114	13	119	1.96e-34	125
Msa0547960	AT1G74080.1	53.922	102	47	0	8	109	13	114	2.78e-34	126
Msa0547960	AT3G53200.2	72.222	72	20	0	40	111	9	80	2.96e-34	122
Msa0547960	AT5G49330.1	54.369	103	47	0	8	110	13	115	3.34e-34	126
Msa0547960	AT5G06100.1	51.923	104	50	0	8	111	33	136	5.23e-34	127
Msa0547960	AT3G11440.2	50.000	110	54	1	4	112	38	147	6.38e-34	127
Msa0547960	AT5G49620.2	50.000	122	47	1	8	115	27	148	6.45e-34	125
Msa0547960	AT3G12720.1	47.573	103	54	0	8	110	23	125	1.08e-33	124
Msa0547960	AT5G06100.5	51.923	104	50	0	8	111	33	136	1.50e-33	127
Msa0547960	AT5G06100.2	51.923	104	50	0	8	111	33	136	1.50e-33	127
Msa0547960	AT5G06100.3	51.923	104	50	0	8	111	33	136	1.50e-33	127
Msa0547960	AT5G06100.4	51.923	104	50	0	8	111	33	136	1.50e-33	127
Msa0547960	AT3G47600.1	42.177	147	79	1	8	154	13	153	1.91e-33	124
Msa0547960	AT3G11440.3	48.148	108	56	0	4	111	38	145	1.92e-33	127
Msa0547960	AT3G11440.4	48.148	108	56	0	4	111	38	145	1.92e-33	127
Msa0547960	AT3G11440.1	48.148	108	56	0	4	111	38	145	1.92e-33	127
Msa0547960	AT5G35550.1	46.400	125	60	1	2	119	9	133	5.06e-33	121
Msa0547960	AT4G01680.2	50.435	115	45	1	8	110	13	127	9.93e-33	122
Msa0547960	AT1G08810.1	50.485	103	51	0	8	110	13	115	2.07e-32	120
Msa0547960	AT1G18710.1	49.515	103	52	0	8	110	13	115	2.89e-32	119
Msa0547960	AT1G74650.1	49.074	108	55	0	8	115	13	120	1.22e-31	119
Msa0547960	AT3G28910.1	50.485	103	51	0	8	110	13	115	2.52e-31	118
Msa0547960	AT5G62470.2	50.485	103	51	0	8	110	13	115	5.21e-31	118
Msa0547960	AT5G14750.3	41.791	134	70	2	34	159	4	137	2.93e-30	111
Msa0547960	AT5G26660.2	66.197	71	24	0	40	110	14	84	6.91e-30	114
Msa0547960	AT5G57620.1	45.946	111	59	1	8	117	13	123	9.80e-30	114
Msa0547960	AT3G49690.1	46.429	112	55	2	8	116	13	122	1.41e-29	113
Msa0547960	AT5G62470.1	50.485	103	50	1	8	110	13	114	1.65e-29	114
Msa0547960	AT1G66380.1	52.427	103	49	0	8	110	9	111	3.20e-29	107
Msa0547960	AT4G37780.1	45.536	112	60	1	8	118	13	124	8.85e-29	111
Msa0547960	AT5G23000.1	48.077	104	53	1	8	110	13	116	9.06e-29	111
Msa0547960	AT1G56650.1	45.968	124	62	1	8	126	9	132	9.21e-29	109
Msa0547960	AT5G65790.1	45.536	112	56	2	8	116	13	122	1.22e-28	112
Msa0547960	AT3G60460.1	49.565	115	55	2	4	117	8	120	1.27e-28	110
Msa0547960	AT2G39880.1	47.664	107	53	2	9	114	50	154	4.42e-28	110
Msa0547960	AT1G66390.1	50.485	103	51	0	8	110	9	111	5.40e-28	107
Msa0547960	AT2G26950.1	46.729	107	55	1	9	115	18	122	7.46e-28	110
Msa0547960	AT5G35550.2	50.495	101	43	1	26	119	36	136	1.04e-27	107
Msa0547960	AT3G09230.1	49.020	102	51	1	9	110	55	155	1.21e-27	109
Msa0547960	AT2G36890.1	46.226	106	52	2	8	110	13	116	1.28e-26	105
Msa0547960	AT3G12820.2	59.155	71	29	0	43	113	2	72	1.66e-26	102
Msa0547960	AT2G36890.2	46.226	106	52	2	8	110	54	157	2.14e-26	105
Msa0547960	AT3G55730.1	47.619	105	52	2	9	112	56	158	2.27e-26	106
Msa0547960	AT3G47600.2	45.217	115	57	1	40	154	39	147	3.46e-26	104
Msa0547960	AT3G09370.1	47.059	102	53	1	9	110	130	230	7.37e-26	105
Msa0547960	AT3G09370.1	39.000	100	59	2	9	107	78	176	5.32e-13	68.6
Msa0547960	AT3G09370.2	47.059	102	53	1	9	110	135	235	7.63e-26	105
Msa0547960	AT3G09370.2	39.000	100	59	2	9	107	83	181	4.87e-13	68.6
Msa0547960	AT1G69560.1	47.573	103	51	2	9	110	107	207	8.87e-26	103
Msa0547960	AT1G69560.2	47.573	103	51	2	9	110	123	223	1.13e-25	103
Msa0547960	AT5G02320.1	47.059	102	53	1	9	110	127	227	1.21e-25	105
Msa0547960	AT5G02320.1	36.000	100	62	2	9	107	75	173	6.13e-12	65.5
Msa0547960	AT5G02320.2	47.059	102	53	1	9	110	127	227	1.21e-25	105
Msa0547960	AT5G02320.2	36.000	100	62	2	9	107	75	173	6.13e-12	65.5
Msa0547960	AT3G09370.3	47.059	102	53	1	9	110	143	243	1.23e-25	105
Msa0547960	AT3G09370.3	39.000	100	59	2	9	107	91	189	5.86e-13	68.6
Msa0547960	AT3G27785.1	45.370	108	58	1	9	116	189	295	1.33e-25	104
Msa0547960	AT1G26780.1	47.573	103	51	2	9	110	98	198	1.78e-25	101
Msa0547960	AT5G02320.3	47.059	102	53	1	9	110	67	167	2.04e-25	104
Msa0547960	AT5G02320.3	36.000	100	62	2	9	107	15	113	9.52e-12	64.7
Msa0547960	AT1G26780.2	47.573	103	51	2	9	110	98	198	2.57e-25	102
Msa0547960	AT5G17800.1	38.686	137	78	3	2	133	86	221	3.06e-25	102
Msa0547960	AT3G50060.1	44.118	102	56	1	9	110	6	106	3.17e-25	101
Msa0547960	AT5G58850.1	41.129	124	69	3	9	131	105	225	6.89e-25	102
Msa0547960	AT5G11050.1	40.833	120	68	2	9	127	105	222	1.25e-24	101
Msa0547960	AT4G18770.1	42.735	117	63	2	9	122	217	332	1.45e-24	101
Msa0547960	AT5G67300.1	44.118	102	56	1	9	110	6	106	1.82e-24	99.8
Msa0547960	AT2G23290.1	46.078	102	54	1	9	110	13	113	1.96e-24	99.8
Msa0547960	AT1G17950.1	47.788	113	55	3	9	120	5	114	2.36e-24	98.2
Msa0547960	AT4G37260.1	43.396	106	59	1	9	114	13	117	1.13e-23	97.8
Msa0547960	AT5G11510.3	41.176	102	59	1	9	110	81	181	1.12e-22	97.4
Msa0547960	AT5G11510.3	35.294	102	64	2	7	107	27	127	2.78e-12	66.6
Msa0547960	AT5G11510.1	41.176	102	59	1	9	110	81	181	1.12e-22	97.4
Msa0547960	AT5G11510.1	35.294	102	64	2	7	107	27	127	2.78e-12	66.6
Msa0547960	AT5G11510.4	41.176	102	59	1	9	110	81	181	1.12e-22	97.4
Msa0547960	AT5G11510.4	35.294	102	64	2	7	107	27	127	2.78e-12	66.6
Msa0547960	AT5G11510.2	41.176	102	59	1	9	110	81	181	1.25e-22	97.1
Msa0547960	AT5G11510.2	35.294	102	64	2	7	107	27	127	2.62e-12	66.6
Msa0547960	AT5G11510.5	41.176	102	59	1	9	110	81	181	1.27e-22	97.1
Msa0547960	AT5G11510.5	35.294	102	64	2	7	107	27	127	2.57e-12	66.6
Msa0547960	AT4G33450.1	41.176	119	68	2	8	125	18	135	2.97e-22	92.4
Msa0547960	AT3G29020.1	35.878	131	80	2	4	131	57	186	3.27e-22	92.0
Msa0547960	AT1G73410.1	46.789	109	55	2	9	116	6	112	4.79e-22	91.7
Msa0547960	AT3G29020.2	37.500	144	77	4	4	144	59	192	8.08e-22	92.4
Msa0547960	AT1G73410.2	46.789	109	55	2	9	116	6	112	1.16e-21	89.7
Msa0547960	AT1G66380.3	57.895	76	32	0	35	110	3	78	1.89e-21	86.7
Msa0547960	AT2G25230.1	40.741	108	61	2	12	119	29	133	2.62e-21	89.7
Msa0547960	AT3G23250.2	49.438	89	44	1	53	141	1	88	3.38e-21	89.4
Msa0547960	AT5G14750.4	44.086	93	46	2	53	139	1	93	3.95e-21	86.7
Msa0547960	AT5G14750.2	44.086	93	46	2	53	139	1	93	3.95e-21	86.7
Msa0547960	AT5G40360.1	33.553	152	97	2	4	152	153	303	4.06e-21	91.3
Msa0547960	AT1G22640.3	63.793	58	21	0	53	110	1	58	6.38e-21	87.8
Msa0547960	AT4G32730.5	38.835	103	60	2	9	110	87	187	2.02e-20	90.9
Msa0547960	AT4G32730.5	33.333	102	66	2	7	107	33	133	1.70e-11	64.3
Msa0547960	AT4G32730.4	38.835	103	60	2	9	110	87	187	2.02e-20	90.9
Msa0547960	AT4G32730.4	33.333	102	66	2	7	107	33	133	1.70e-11	64.3
Msa0547960	AT4G32730.3	38.835	103	60	2	9	110	87	187	2.02e-20	90.9
Msa0547960	AT4G32730.3	33.333	102	66	2	7	107	33	133	1.70e-11	64.3
Msa0547960	AT4G32730.2	38.835	103	60	2	9	110	87	187	2.02e-20	90.9
Msa0547960	AT4G32730.2	33.333	102	66	2	7	107	33	133	1.70e-11	64.3
Msa0547960	AT4G32730.1	38.835	103	60	2	9	110	87	187	2.10e-20	90.5
Msa0547960	AT4G32730.1	33.333	102	66	2	7	107	33	133	1.49e-11	64.3
Msa0547960	AT2G37630.1	38.679	106	63	1	12	115	7	112	3.68e-19	85.9
Msa0547960	AT5G39700.1	39.216	102	61	1	8	109	55	155	8.16e-19	82.0
Msa0547960	AT2G02820.1	41.121	107	61	2	12	118	33	137	3.42e-18	83.6
Msa0547960	AT2G02820.2	41.121	107	61	2	12	118	33	137	3.65e-18	83.6
Msa0547960	AT2G02820.3	41.121	107	61	2	12	118	33	137	4.84e-18	82.4
Msa0547960	AT1G14350.2	41.176	102	58	2	12	113	28	127	6.66e-18	82.8
Msa0547960	AT1G14350.1	41.176	102	58	2	12	113	28	127	6.66e-18	82.8
Msa0547960	AT1G18960.1	37.143	105	63	2	9	113	10	111	9.08e-17	78.6
Msa0547960	AT1G71030.2	47.692	65	34	0	46	110	5	69	1.40e-16	75.9
Msa0547960	AT1G71030.1	47.692	65	34	0	46	110	19	83	2.07e-16	75.5
Msa0547960	AT5G40430.1	37.838	111	65	3	9	119	54	160	2.67e-16	76.6
Msa0547960	AT4G00540.2	33.113	151	95	4	8	154	102	250	1.10e-15	76.3
Msa0547960	AT4G00540.1	33.113	151	95	4	8	154	100	248	1.12e-15	76.3
Msa0547960	AT1G66380.2	45.000	80	44	0	8	87	9	88	5.66e-15	69.3
Msa0547960	AT3G18100.1	38.384	99	58	2	7	104	544	640	3.49e-14	72.4
Msa0547960	AT3G18100.4	38.384	99	58	2	7	104	383	479	3.54e-14	72.4
Msa0547960	AT3G18100.3	38.384	99	58	2	7	104	496	592	4.15e-14	72.0
Msa0547960	AT3G18100.2	38.384	99	58	2	7	104	331	427	4.69e-14	72.0
Msa0547960	AT4G25560.2	56.522	46	20	0	65	110	2	47	2.10e-13	67.8
Msa0547960	AT1G14350.3	30.968	155	78	6	17	170	2	128	1.19e-12	67.4
Msa0547960	AT1G14350.4	30.968	155	78	6	17	170	2	128	1.19e-12	67.4

Find 64 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTATGGAACTTCACTCTAAA+TGG	0.146424	4_1:-41506281	Msa0547960:CDS
CATAACAAGTGTTTCTTCTT+GGG	0.234566	4_1:+41506299	None:intergenic
ATGCTATATACATGTTAATT+AGG	0.259653	4_1:+41505094	None:intergenic
TTCACTCTAAATGGGGAAAT+AGG	0.260240	4_1:-41506272	Msa0547960:intron
CCATAACAAGTGTTTCTTCT+TGG	0.289211	4_1:+41506298	None:intergenic
GGTTATTTGGTGATCGTAGA+TGG	0.292214	4_1:-41506542	Msa0547960:CDS
ATCTCATTGTCTGTTCTTCC+TGG	0.294103	4_1:+41505650	None:intergenic
GTTCTTCAACCTGTTCTTGA+TGG	0.305333	4_1:-41505371	Msa0547960:CDS
GATGATGTAGAAGGCATTAT+AGG	0.306843	4_1:+41505314	None:intergenic
GTAGATCAGGTAAGAGTTGC+AGG	0.324383	4_1:-41506374	Msa0547960:CDS
GGTACTCAATGGATGATATA+TGG	0.324488	4_1:-41505427	Msa0547960:CDS
ATCTTGCCACGTTTGAGATC+AGG	0.342275	4_1:+41506327	None:intergenic
CTTGTTCAATTTCTTGTACT+TGG	0.347999	4_1:+41505450	None:intergenic
AAGATGTTATTCCCTCCTTT+TGG	0.354807	4_1:-41505239	Msa0547960:CDS
CAAGGGAACACATTTCTAAC+TGG	0.364614	4_1:-41505188	Msa0547960:CDS
ACAATGAGATTAAGAATTAC+TGG	0.365207	4_1:-41505637	Msa0547960:CDS
GTTCCCTTGTTGATCATAGA+AGG	0.376985	4_1:+41505202	None:intergenic
TATGGAACTTCACTCTAAAT+GGG	0.390577	4_1:-41506280	Msa0547960:CDS
AGAACAAGAAGATTACAAAT+TGG	0.394597	4_1:-41506577	Msa0547960:CDS
TAATCTTCTTGTTCTGTCCA+TGG	0.396833	4_1:+41506585	None:intergenic
GTTGTAGGTTTGAGTAGATC+AGG	0.410818	4_1:-41506387	Msa0547960:intron
TTCTTCTTCAGACTCTTTGT+TGG	0.419812	4_1:+41505478	None:intergenic
CCAAGAAGAAACACTTGTTA+TGG	0.427820	4_1:-41506298	Msa0547960:CDS
ATTGTCCGATCTCAAATTAA+CGG	0.444962	4_1:-41504947	Msa0547960:three_prime_UTR
TTCATATTTAGATCCATTGT+GGG	0.445170	4_1:-41505282	Msa0547960:CDS
TCACTAGTTCCATCAAGAAC+AGG	0.449699	4_1:+41505362	None:intergenic
TCACAAGAAATAAGCAGAAA+AGG	0.460369	4_1:-41506609	Msa0547960:CDS
TAATCCCATGATGATGTAGA+AGG	0.467172	4_1:+41505305	None:intergenic
TAAGAGTTGCAGGTTACGTT+GGG	0.469904	4_1:-41506364	Msa0547960:CDS
ATAACAAGTGTTTCTTCTTG+GGG	0.472612	4_1:+41506300	None:intergenic
TAGTATATGTCTTTCTGAAA+GGG	0.474936	4_1:-41505072	Msa0547960:three_prime_UTR
GTTATTTGGTGATCGTAGAT+GGG	0.492828	4_1:-41506541	Msa0547960:CDS
TAATGCCTTCTACATCATCA+TGG	0.505668	4_1:-41505310	Msa0547960:CDS
TCTTGCCACGTTTGAGATCA+GGG	0.506211	4_1:+41506328	None:intergenic
ATAGTATATGTCTTTCTGAA+AGG	0.510625	4_1:-41505073	Msa0547960:three_prime_UTR
TTTAGATCCATTGTGGGTGA+TGG	0.511419	4_1:-41505276	Msa0547960:CDS
ATTCATATTTAGATCCATTG+TGG	0.525981	4_1:-41505283	Msa0547960:CDS
TGTTTGAGAAATGTGAGGAT+TGG	0.543506	4_1:+41505528	None:intergenic
TGGCAACTAGAAGATTGATC+AGG	0.550479	4_1:+41505548	None:intergenic
TTAGGCTATCTTATGACAGA+TGG	0.551465	4_1:+41505112	None:intergenic
AATTGAACAAGGGTACTCAA+TGG	0.554035	4_1:-41505438	Msa0547960:CDS
TACGTGTTTCTCTTTAAGCA+TGG	0.556053	4_1:-41504900	Msa0547960:three_prime_UTR
AAATAAGCAGAAAAGGTCCA+TGG	0.566374	4_1:-41506602	Msa0547960:CDS
CTCGACCGTTAATTTGAGAT+CGG	0.572874	4_1:+41504942	None:intergenic
CGATCTCAAATTAACGGTCG+AGG	0.575755	4_1:-41504941	Msa0547960:three_prime_UTR
GTAAGAGTTGCAGGTTACGT+TGG	0.576254	4_1:-41506365	Msa0547960:CDS
TCTTCATCCATCACCCACAA+TGG	0.577626	4_1:+41505269	None:intergenic
CAAGTACAAGAAATTGAACA+AGG	0.580887	4_1:-41505449	Msa0547960:CDS
AATGCCTTCTACATCATCAT+GGG	0.580960	4_1:-41505309	Msa0547960:CDS
TTTCCTTCTATGATCAACAA+GGG	0.589914	4_1:-41505205	Msa0547960:CDS
CTCAAACAGTAACCATGGTG+TGG	0.595976	4_1:-41505513	Msa0547960:CDS
AAATATTGGTCACCAAAAGG+AGG	0.598319	4_1:+41505227	None:intergenic
TCTTCATCATCGATTTAGAT+CGG	0.603017	4_1:+41505005	None:intergenic
AATATTGGTCACCAAAAGGA+GGG	0.618360	4_1:+41505228	None:intergenic
CATCATCGATTTAGATCGGA+CGG	0.631191	4_1:+41505009	None:intergenic
CATTTCTCAAACAGTAACCA+TGG	0.632435	4_1:-41505518	Msa0547960:CDS
ATGGAACTTCACTCTAAATG+GGG	0.635977	4_1:-41506279	Msa0547960:CDS
AGAATTGCTAGAAAACTACC+AGG	0.647884	4_1:-41505668	Msa0547960:CDS
GTTACTGTTTGAGAAATGTG+AGG	0.673513	4_1:+41505523	None:intergenic
CTTCACCCTGATCTCAAACG+TGG	0.676208	4_1:-41506333	Msa0547960:CDS
TCAGGTGACGATGAAATCGA+AGG	0.678422	4_1:+41505566	None:intergenic
AAGTACAAGAAATTGAACAA+GGG	0.689326	4_1:-41505448	Msa0547960:CDS
ATGAGATTAAGAATTACTGG+AGG	0.710072	4_1:-41505634	Msa0547960:CDS
AAGCATGTGAATCCACACCA+TGG	0.747748	4_1:+41505501	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGAAAATTCTTGAATATATT+TGG	-	chr4_1:41505709-41505728	Msa0547960:intron	15.0%
!!	TGAAAATTCTTGAATATATT+TGG	-	chr4_1:41505709-41505728	Msa0547960:intron	15.0%
!!	AATAAATAGGTATGCTTATA+AGG	-	chr4_1:41504975-41504994	Msa0547960:three_prime_UTR	20.0%
!!	ATAAATAGGTATGCTTATAA+GGG	-	chr4_1:41504976-41504995	Msa0547960:three_prime_UTR	20.0%
!!	ATGCTATATACATGTTAATT+AGG	+	chr4_1:41506358-41506377	None:intergenic	20.0%
!!	AATAAATAGGTATGCTTATA+AGG	-	chr4_1:41504975-41504994	Msa0547960:three_prime_UTR	20.0%
!!	ATAAATAGGTATGCTTATAA+GGG	-	chr4_1:41504976-41504995	Msa0547960:three_prime_UTR	20.0%
!!	ATGCTATATACATGTTAATT+AGG	+	chr4_1:41506358-41506377	None:intergenic	20.0%
!	AGAACAAGAAGATTACAAAT+TGG	-	chr4_1:41504872-41504891	Msa0547960:three_prime_UTR	25.0%
!!	TACAAATTGGCATATTTTGT+AGG	-	chr4_1:41504885-41504904	Msa0547960:three_prime_UTR	25.0%
!!	ACAAATTGGCATATTTTGTA+GGG	-	chr4_1:41504886-41504905	Msa0547960:three_prime_UTR	25.0%
!	TGTATTTGGATATATGAAGT+AGG	+	chr4_1:41505258-41505277	None:intergenic	25.0%
!	ACAATGAGATTAAGAATTAC+TGG	-	chr4_1:41505812-41505831	Msa0547960:intron	25.0%
!	AAGTACAAGAAATTGAACAA+GGG	-	chr4_1:41506001-41506020	Msa0547960:intron	25.0%
!	ATTCATATTTAGATCCATTG+TGG	-	chr4_1:41506166-41506185	Msa0547960:intron	25.0%
!	TTCATATTTAGATCCATTGT+GGG	-	chr4_1:41506167-41506186	Msa0547960:intron	25.0%
!	GATCATAGAAGGAAAAATAT+TGG	+	chr4_1:41506239-41506258	None:intergenic	25.0%
!	ATAGTATATGTCTTTCTGAA+AGG	-	chr4_1:41506376-41506395	Msa0547960:CDS	25.0%
!!	TAGTATATGTCTTTCTGAAA+GGG	-	chr4_1:41506377-41506396	Msa0547960:CDS	25.0%
!	AGAACAAGAAGATTACAAAT+TGG	-	chr4_1:41504872-41504891	Msa0547960:three_prime_UTR	25.0%
!!	TACAAATTGGCATATTTTGT+AGG	-	chr4_1:41504885-41504904	Msa0547960:three_prime_UTR	25.0%
!!	ACAAATTGGCATATTTTGTA+GGG	-	chr4_1:41504886-41504905	Msa0547960:three_prime_UTR	25.0%
!	TGTATTTGGATATATGAAGT+AGG	+	chr4_1:41505258-41505277	None:intergenic	25.0%
!	ACAATGAGATTAAGAATTAC+TGG	-	chr4_1:41505812-41505831	Msa0547960:intron	25.0%
!	AAGTACAAGAAATTGAACAA+GGG	-	chr4_1:41506001-41506020	Msa0547960:intron	25.0%
!	ATTCATATTTAGATCCATTG+TGG	-	chr4_1:41506166-41506185	Msa0547960:intron	25.0%
!	TTCATATTTAGATCCATTGT+GGG	-	chr4_1:41506167-41506186	Msa0547960:intron	25.0%
!	GATCATAGAAGGAAAAATAT+TGG	+	chr4_1:41506239-41506258	None:intergenic	25.0%
!	ATAGTATATGTCTTTCTGAA+AGG	-	chr4_1:41506376-41506395	Msa0547960:CDS	25.0%
!!	TAGTATATGTCTTTCTGAAA+GGG	-	chr4_1:41506377-41506396	Msa0547960:CDS	25.0%
	TCACAAGAAATAAGCAGAAA+AGG	-	chr4_1:41504840-41504859	Msa0547960:three_prime_UTR	30.0%
!	GCATATTTTGTAGGGTTATT+TGG	-	chr4_1:41504894-41504913	Msa0547960:three_prime_UTR	30.0%
!	TAGATGGGATTTTATAGCAA+AGG	-	chr4_1:41504923-41504942	Msa0547960:three_prime_UTR	30.0%
!	GATTTTATAGCAAAGGTTTC+AGG	-	chr4_1:41504930-41504949	Msa0547960:three_prime_UTR	30.0%
	AGCATTAATTCCTTTAACCA+TGG	-	chr4_1:41505018-41505037	Msa0547960:three_prime_UTR	30.0%
	AACAGAAAAACCATGGTTAA+AGG	+	chr4_1:41505031-41505050	None:intergenic	30.0%
	ATAACAAGTGTTTCTTCTTG+GGG	+	chr4_1:41505152-41505171	None:intergenic	30.0%
	CATAACAAGTGTTTCTTCTT+GGG	+	chr4_1:41505153-41505172	None:intergenic	30.0%
	TTATGGAACTTCACTCTAAA+TGG	-	chr4_1:41505168-41505187	Msa0547960:exon	30.0%
	TATGGAACTTCACTCTAAAT+GGG	-	chr4_1:41505169-41505188	Msa0547960:exon	30.0%
	TGATTGACATGAGATGTATT+TGG	+	chr4_1:41505272-41505291	None:intergenic	30.0%
	AGAGTTACGATCAAAGAAAT+TGG	-	chr4_1:41505305-41505324	Msa0547960:CDS	30.0%
	ACGATCAAAGAAATTGGATA+CGG	-	chr4_1:41505311-41505330	Msa0547960:CDS	30.0%
	GATCTTCTATAGCTGTATTA+TGG	+	chr4_1:41505427-41505446	None:intergenic	30.0%
	TCCTTGTCAAATATACGAAA+TGG	-	chr4_1:41505445-41505464	Msa0547960:CDS	30.0%
	TCCATTTCGTATATTTGACA+AGG	+	chr4_1:41505449-41505468	None:intergenic	30.0%
	ATGAGATTAAGAATTACTGG+AGG	-	chr4_1:41505815-41505834	Msa0547960:intron	30.0%
	CTTGTTCAATTTCTTGTACT+TGG	+	chr4_1:41506002-41506021	None:intergenic	30.0%
	CAAGTACAAGAAATTGAACA+AGG	-	chr4_1:41506000-41506019	Msa0547960:intron	30.0%
	GAAAAATATTGGTCACCAAA+AGG	+	chr4_1:41506228-41506247	None:intergenic	30.0%
!	TTTTCCTTCTATGATCAACA+AGG	-	chr4_1:41506243-41506262	Msa0547960:intron	30.0%
	TTTCCTTCTATGATCAACAA+GGG	-	chr4_1:41506244-41506263	Msa0547960:intron	30.0%
!!	TCTTCATCATCGATTTAGAT+CGG	+	chr4_1:41506447-41506466	None:intergenic	30.0%
	ATTGTCCGATCTCAAATTAA+CGG	-	chr4_1:41506502-41506521	Msa0547960:intron	30.0%
	TCACAAGAAATAAGCAGAAA+AGG	-	chr4_1:41504840-41504859	Msa0547960:three_prime_UTR	30.0%
!	GCATATTTTGTAGGGTTATT+TGG	-	chr4_1:41504894-41504913	Msa0547960:three_prime_UTR	30.0%
!	TAGATGGGATTTTATAGCAA+AGG	-	chr4_1:41504923-41504942	Msa0547960:three_prime_UTR	30.0%
!	GATTTTATAGCAAAGGTTTC+AGG	-	chr4_1:41504930-41504949	Msa0547960:three_prime_UTR	30.0%
	AGCATTAATTCCTTTAACCA+TGG	-	chr4_1:41505018-41505037	Msa0547960:three_prime_UTR	30.0%
	AACAGAAAAACCATGGTTAA+AGG	+	chr4_1:41505031-41505050	None:intergenic	30.0%
	ATAACAAGTGTTTCTTCTTG+GGG	+	chr4_1:41505152-41505171	None:intergenic	30.0%
	CATAACAAGTGTTTCTTCTT+GGG	+	chr4_1:41505153-41505172	None:intergenic	30.0%
	TTATGGAACTTCACTCTAAA+TGG	-	chr4_1:41505168-41505187	Msa0547960:exon	30.0%
	TATGGAACTTCACTCTAAAT+GGG	-	chr4_1:41505169-41505188	Msa0547960:exon	30.0%
	TGATTGACATGAGATGTATT+TGG	+	chr4_1:41505272-41505291	None:intergenic	30.0%
	AGAGTTACGATCAAAGAAAT+TGG	-	chr4_1:41505305-41505324	Msa0547960:CDS	30.0%
	ACGATCAAAGAAATTGGATA+CGG	-	chr4_1:41505311-41505330	Msa0547960:CDS	30.0%
	GATCTTCTATAGCTGTATTA+TGG	+	chr4_1:41505427-41505446	None:intergenic	30.0%
	TCCTTGTCAAATATACGAAA+TGG	-	chr4_1:41505445-41505464	Msa0547960:CDS	30.0%
	TCCATTTCGTATATTTGACA+AGG	+	chr4_1:41505449-41505468	None:intergenic	30.0%
	ATGAGATTAAGAATTACTGG+AGG	-	chr4_1:41505815-41505834	Msa0547960:intron	30.0%
	CTTGTTCAATTTCTTGTACT+TGG	+	chr4_1:41506002-41506021	None:intergenic	30.0%
	CAAGTACAAGAAATTGAACA+AGG	-	chr4_1:41506000-41506019	Msa0547960:intron	30.0%
	GAAAAATATTGGTCACCAAA+AGG	+	chr4_1:41506228-41506247	None:intergenic	30.0%
!	TTTTCCTTCTATGATCAACA+AGG	-	chr4_1:41506243-41506262	Msa0547960:intron	30.0%
	TTTCCTTCTATGATCAACAA+GGG	-	chr4_1:41506244-41506263	Msa0547960:intron	30.0%
!!	TCTTCATCATCGATTTAGAT+CGG	+	chr4_1:41506447-41506466	None:intergenic	30.0%
	ATTGTCCGATCTCAAATTAA+CGG	-	chr4_1:41506502-41506521	Msa0547960:intron	30.0%
	AAATAAGCAGAAAAGGTCCA+TGG	-	chr4_1:41504847-41504866	Msa0547960:three_prime_UTR	35.0%
	TAATCTTCTTGTTCTGTCCA+TGG	+	chr4_1:41504867-41504886	None:intergenic	35.0%
!	GTTATTTGGTGATCGTAGAT+GGG	-	chr4_1:41504908-41504927	Msa0547960:three_prime_UTR	35.0%
	TGTGAGAAACAGAAAAACCA+TGG	+	chr4_1:41505038-41505057	None:intergenic	35.0%
!	TGTTTCTCACACTTTGTTGT+AGG	-	chr4_1:41505047-41505066	Msa0547960:three_prime_UTR	35.0%
	CCATAACAAGTGTTTCTTCT+TGG	+	chr4_1:41505154-41505173	None:intergenic	35.0%
!	CCAAGAAGAAACACTTGTTA+TGG	-	chr4_1:41505151-41505170	Msa0547960:three_prime_UTR	35.0%
	ATGGAACTTCACTCTAAATG+GGG	-	chr4_1:41505170-41505189	Msa0547960:exon	35.0%
	TTCACTCTAAATGGGGAAAT+AGG	-	chr4_1:41505177-41505196	Msa0547960:exon	35.0%
	GTAGGTAGTAGGAAAAGAAA+AGG	+	chr4_1:41505240-41505259	None:intergenic	35.0%
	GGATATATGAAGTAGGTAGT+AGG	+	chr4_1:41505251-41505270	None:intergenic	35.0%
	AATATGGTGCTCAAACAGTA+AGG	-	chr4_1:41505338-41505357	Msa0547960:CDS	35.0%
	AAGGACTATTAGACTTTGAG+AGG	+	chr4_1:41505392-41505411	None:intergenic	35.0%
	AGAATTGCTAGAAAACTACC+AGG	-	chr4_1:41505781-41505800	Msa0547960:intron	35.0%
	GACACACATGAGAAAAAAGA+GGG	-	chr4_1:41505837-41505856	Msa0547960:intron	35.0%
	TGTTTGAGAAATGTGAGGAT+TGG	+	chr4_1:41505924-41505943	None:intergenic	35.0%
	GTTACTGTTTGAGAAATGTG+AGG	+	chr4_1:41505929-41505948	None:intergenic	35.0%
	CATTTCTCAAACAGTAACCA+TGG	-	chr4_1:41505931-41505950	Msa0547960:intron	35.0%
	TTCTTCTTCAGACTCTTTGT+TGG	+	chr4_1:41505974-41505993	None:intergenic	35.0%
!!	AATTGAACAAGGGTACTCAA+TGG	-	chr4_1:41506011-41506030	Msa0547960:intron	35.0%
	GGTACTCAATGGATGATATA+TGG	-	chr4_1:41506022-41506041	Msa0547960:intron	35.0%
!!	GATGATGTAGAAGGCATTAT+AGG	+	chr4_1:41506138-41506157	None:intergenic	35.0%
	TAATGCCTTCTACATCATCA+TGG	-	chr4_1:41506139-41506158	Msa0547960:intron	35.0%
	AATGCCTTCTACATCATCAT+GGG	-	chr4_1:41506140-41506159	Msa0547960:intron	35.0%
!	TAATCCCATGATGATGTAGA+AGG	+	chr4_1:41506147-41506166	None:intergenic	35.0%
!	AAGATGTTATTCCCTCCTTT+TGG	-	chr4_1:41506210-41506229	Msa0547960:intron	35.0%
	AATATTGGTCACCAAAAGGA+GGG	+	chr4_1:41506224-41506243	None:intergenic	35.0%
	AAATATTGGTCACCAAAAGG+AGG	+	chr4_1:41506225-41506244	None:intergenic	35.0%
	TTAGGCTATCTTATGACAGA+TGG	+	chr4_1:41506340-41506359	None:intergenic	35.0%
	TACGTGTTTCTCTTTAAGCA+TGG	-	chr4_1:41506549-41506568	Msa0547960:CDS	35.0%
	AAATAAGCAGAAAAGGTCCA+TGG	-	chr4_1:41504847-41504866	Msa0547960:three_prime_UTR	35.0%
	TAATCTTCTTGTTCTGTCCA+TGG	+	chr4_1:41504867-41504886	None:intergenic	35.0%
!	GTTATTTGGTGATCGTAGAT+GGG	-	chr4_1:41504908-41504927	Msa0547960:three_prime_UTR	35.0%
	TGTGAGAAACAGAAAAACCA+TGG	+	chr4_1:41505038-41505057	None:intergenic	35.0%
!	TGTTTCTCACACTTTGTTGT+AGG	-	chr4_1:41505047-41505066	Msa0547960:three_prime_UTR	35.0%
	CCATAACAAGTGTTTCTTCT+TGG	+	chr4_1:41505154-41505173	None:intergenic	35.0%
!	CCAAGAAGAAACACTTGTTA+TGG	-	chr4_1:41505151-41505170	Msa0547960:three_prime_UTR	35.0%
	ATGGAACTTCACTCTAAATG+GGG	-	chr4_1:41505170-41505189	Msa0547960:exon	35.0%
	TTCACTCTAAATGGGGAAAT+AGG	-	chr4_1:41505177-41505196	Msa0547960:exon	35.0%
	GTAGGTAGTAGGAAAAGAAA+AGG	+	chr4_1:41505240-41505259	None:intergenic	35.0%
	GGATATATGAAGTAGGTAGT+AGG	+	chr4_1:41505251-41505270	None:intergenic	35.0%
	AATATGGTGCTCAAACAGTA+AGG	-	chr4_1:41505338-41505357	Msa0547960:CDS	35.0%
	AAGGACTATTAGACTTTGAG+AGG	+	chr4_1:41505392-41505411	None:intergenic	35.0%
	AGAATTGCTAGAAAACTACC+AGG	-	chr4_1:41505781-41505800	Msa0547960:intron	35.0%
	GACACACATGAGAAAAAAGA+GGG	-	chr4_1:41505837-41505856	Msa0547960:intron	35.0%
	TGTTTGAGAAATGTGAGGAT+TGG	+	chr4_1:41505924-41505943	None:intergenic	35.0%
	GTTACTGTTTGAGAAATGTG+AGG	+	chr4_1:41505929-41505948	None:intergenic	35.0%
	CATTTCTCAAACAGTAACCA+TGG	-	chr4_1:41505931-41505950	Msa0547960:intron	35.0%
	TTCTTCTTCAGACTCTTTGT+TGG	+	chr4_1:41505974-41505993	None:intergenic	35.0%
!!	AATTGAACAAGGGTACTCAA+TGG	-	chr4_1:41506011-41506030	Msa0547960:intron	35.0%
	GGTACTCAATGGATGATATA+TGG	-	chr4_1:41506022-41506041	Msa0547960:intron	35.0%
!!	GATGATGTAGAAGGCATTAT+AGG	+	chr4_1:41506138-41506157	None:intergenic	35.0%
	TAATGCCTTCTACATCATCA+TGG	-	chr4_1:41506139-41506158	Msa0547960:intron	35.0%
	AATGCCTTCTACATCATCAT+GGG	-	chr4_1:41506140-41506159	Msa0547960:intron	35.0%
!	TAATCCCATGATGATGTAGA+AGG	+	chr4_1:41506147-41506166	None:intergenic	35.0%
!	AAGATGTTATTCCCTCCTTT+TGG	-	chr4_1:41506210-41506229	Msa0547960:intron	35.0%
	AATATTGGTCACCAAAAGGA+GGG	+	chr4_1:41506224-41506243	None:intergenic	35.0%
	AAATATTGGTCACCAAAAGG+AGG	+	chr4_1:41506225-41506244	None:intergenic	35.0%
	TTAGGCTATCTTATGACAGA+TGG	+	chr4_1:41506340-41506359	None:intergenic	35.0%
	TACGTGTTTCTCTTTAAGCA+TGG	-	chr4_1:41506549-41506568	Msa0547960:CDS	35.0%
!	GGTTATTTGGTGATCGTAGA+TGG	-	chr4_1:41504907-41504926	Msa0547960:three_prime_UTR	40.0%
!!	AGCAAAGGTTTCAGGTTTGA+AGG	-	chr4_1:41504938-41504957	Msa0547960:three_prime_UTR	40.0%
!!	AAAGGTTTCAGGTTTGAAGG+TGG	-	chr4_1:41504941-41504960	Msa0547960:three_prime_UTR	40.0%
	GTTGTAGGTTTGAGTAGATC+AGG	-	chr4_1:41505062-41505081	Msa0547960:three_prime_UTR	40.0%
	TAAGAGTTGCAGGTTACGTT+GGG	-	chr4_1:41505085-41505104	Msa0547960:three_prime_UTR	40.0%
	AATTGGATACGGCTGCAATA+TGG	-	chr4_1:41505322-41505341	Msa0547960:CDS	40.0%
!!	ATTATGGTGCTGCAACTGTA+AGG	+	chr4_1:41505411-41505430	None:intergenic	40.0%
	ATTCAAGTCCTCGCTCAAAA+GGG	-	chr4_1:41505575-41505594	Msa0547960:CDS	40.0%
	CGCGGAGACATAAAAAATTG+TGG	-	chr4_1:41505640-41505659	Msa0547960:CDS	40.0%
	CTATGTGTGATGATTGCAGA+TGG	-	chr4_1:41505755-41505774	Msa0547960:intron	40.0%
	ATCTCATTGTCTGTTCTTCC+TGG	+	chr4_1:41505802-41505821	None:intergenic	40.0%
	GGACACACATGAGAAAAAAG+AGG	-	chr4_1:41505836-41505855	Msa0547960:intron	40.0%
	TGGCAACTAGAAGATTGATC+AGG	+	chr4_1:41505904-41505923	None:intergenic	40.0%
	GTTCTTCAACCTGTTCTTGA+TGG	-	chr4_1:41506078-41506097	Msa0547960:intron	40.0%
	TCACTAGTTCCATCAAGAAC+AGG	+	chr4_1:41506090-41506109	None:intergenic	40.0%
	TTTAGATCCATTGTGGGTGA+TGG	-	chr4_1:41506173-41506192	Msa0547960:intron	40.0%
	GTTCCCTTGTTGATCATAGA+AGG	+	chr4_1:41506250-41506269	None:intergenic	40.0%
	CAAGGGAACACATTTCTAAC+TGG	-	chr4_1:41506261-41506280	Msa0547960:intron	40.0%
!!	CATCATCGATTTAGATCGGA+CGG	+	chr4_1:41506443-41506462	None:intergenic	40.0%
!	CTCGACCGTTAATTTGAGAT+CGG	+	chr4_1:41506510-41506529	None:intergenic	40.0%
!	GGTTATTTGGTGATCGTAGA+TGG	-	chr4_1:41504907-41504926	Msa0547960:three_prime_UTR	40.0%
!!	AGCAAAGGTTTCAGGTTTGA+AGG	-	chr4_1:41504938-41504957	Msa0547960:three_prime_UTR	40.0%
!!	AAAGGTTTCAGGTTTGAAGG+TGG	-	chr4_1:41504941-41504960	Msa0547960:three_prime_UTR	40.0%
	GTTGTAGGTTTGAGTAGATC+AGG	-	chr4_1:41505062-41505081	Msa0547960:three_prime_UTR	40.0%
	TAAGAGTTGCAGGTTACGTT+GGG	-	chr4_1:41505085-41505104	Msa0547960:three_prime_UTR	40.0%
	AATTGGATACGGCTGCAATA+TGG	-	chr4_1:41505322-41505341	Msa0547960:CDS	40.0%
!!	ATTATGGTGCTGCAACTGTA+AGG	+	chr4_1:41505411-41505430	None:intergenic	40.0%
	ATTCAAGTCCTCGCTCAAAA+GGG	-	chr4_1:41505575-41505594	Msa0547960:CDS	40.0%
	CGCGGAGACATAAAAAATTG+TGG	-	chr4_1:41505640-41505659	Msa0547960:CDS	40.0%
	CTATGTGTGATGATTGCAGA+TGG	-	chr4_1:41505755-41505774	Msa0547960:intron	40.0%
	ATCTCATTGTCTGTTCTTCC+TGG	+	chr4_1:41505802-41505821	None:intergenic	40.0%
	GGACACACATGAGAAAAAAG+AGG	-	chr4_1:41505836-41505855	Msa0547960:intron	40.0%
	TGGCAACTAGAAGATTGATC+AGG	+	chr4_1:41505904-41505923	None:intergenic	40.0%
	GTTCTTCAACCTGTTCTTGA+TGG	-	chr4_1:41506078-41506097	Msa0547960:intron	40.0%
	TCACTAGTTCCATCAAGAAC+AGG	+	chr4_1:41506090-41506109	None:intergenic	40.0%
	TTTAGATCCATTGTGGGTGA+TGG	-	chr4_1:41506173-41506192	Msa0547960:intron	40.0%
	GTTCCCTTGTTGATCATAGA+AGG	+	chr4_1:41506250-41506269	None:intergenic	40.0%
	CAAGGGAACACATTTCTAAC+TGG	-	chr4_1:41506261-41506280	Msa0547960:intron	40.0%
!!	CATCATCGATTTAGATCGGA+CGG	+	chr4_1:41506443-41506462	None:intergenic	40.0%
!	CTCGACCGTTAATTTGAGAT+CGG	+	chr4_1:41506510-41506529	None:intergenic	40.0%
	GGCGGGAGAGAGTAATAAAT+AGG	-	chr4_1:41504962-41504981	Msa0547960:three_prime_UTR	45.0%
	GTAGATCAGGTAAGAGTTGC+AGG	-	chr4_1:41505075-41505094	Msa0547960:three_prime_UTR	45.0%
	GTAAGAGTTGCAGGTTACGT+TGG	-	chr4_1:41505084-41505103	Msa0547960:three_prime_UTR	45.0%
!	TCTTGCCACGTTTGAGATCA+GGG	+	chr4_1:41505124-41505143	None:intergenic	45.0%
!	ATCTTGCCACGTTTGAGATC+AGG	+	chr4_1:41505125-41505144	None:intergenic	45.0%
	TGGTGCTCAAACAGTAAGGA+CGG	-	chr4_1:41505342-41505361	Msa0547960:CDS	45.0%
	GATTCAAGTCCTCGCTCAAA+AGG	-	chr4_1:41505574-41505593	Msa0547960:CDS	45.0%
	TTCAAGTCCTCGCTCAAAAG+GGG	-	chr4_1:41505576-41505595	Msa0547960:CDS	45.0%
!	CATGAGAAAAAAGAGGGCAC+AGG	-	chr4_1:41505843-41505862	Msa0547960:intron	45.0%
	TCAGGTGACGATGAAATCGA+AGG	+	chr4_1:41505886-41505905	None:intergenic	45.0%
	CTCAAACAGTAACCATGGTG+TGG	-	chr4_1:41505936-41505955	Msa0547960:intron	45.0%
	AAGCATGTGAATCCACACCA+TGG	+	chr4_1:41505951-41505970	None:intergenic	45.0%
	TCTTCATCCATCACCCACAA+TGG	+	chr4_1:41506183-41506202	None:intergenic	45.0%
	CGGTCAAGACTGAAAAACTG+CGG	+	chr4_1:41506423-41506442	None:intergenic	45.0%
	CGATCTCAAATTAACGGTCG+AGG	-	chr4_1:41506508-41506527	Msa0547960:intron	45.0%
	GGCGGGAGAGAGTAATAAAT+AGG	-	chr4_1:41504962-41504981	Msa0547960:three_prime_UTR	45.0%
	GTAGATCAGGTAAGAGTTGC+AGG	-	chr4_1:41505075-41505094	Msa0547960:three_prime_UTR	45.0%
	GTAAGAGTTGCAGGTTACGT+TGG	-	chr4_1:41505084-41505103	Msa0547960:three_prime_UTR	45.0%
!	TCTTGCCACGTTTGAGATCA+GGG	+	chr4_1:41505124-41505143	None:intergenic	45.0%
!	ATCTTGCCACGTTTGAGATC+AGG	+	chr4_1:41505125-41505144	None:intergenic	45.0%
	TGGTGCTCAAACAGTAAGGA+CGG	-	chr4_1:41505342-41505361	Msa0547960:CDS	45.0%
	GATTCAAGTCCTCGCTCAAA+AGG	-	chr4_1:41505574-41505593	Msa0547960:CDS	45.0%
	TTCAAGTCCTCGCTCAAAAG+GGG	-	chr4_1:41505576-41505595	Msa0547960:CDS	45.0%
!	CATGAGAAAAAAGAGGGCAC+AGG	-	chr4_1:41505843-41505862	Msa0547960:intron	45.0%
	TCAGGTGACGATGAAATCGA+AGG	+	chr4_1:41505886-41505905	None:intergenic	45.0%
	CTCAAACAGTAACCATGGTG+TGG	-	chr4_1:41505936-41505955	Msa0547960:intron	45.0%
	AAGCATGTGAATCCACACCA+TGG	+	chr4_1:41505951-41505970	None:intergenic	45.0%
	TCTTCATCCATCACCCACAA+TGG	+	chr4_1:41506183-41506202	None:intergenic	45.0%
	CGGTCAAGACTGAAAAACTG+CGG	+	chr4_1:41506423-41506442	None:intergenic	45.0%
	CGATCTCAAATTAACGGTCG+AGG	-	chr4_1:41506508-41506527	Msa0547960:intron	45.0%
!!	GGTTTCAGGTTTGAAGGTGG+CGG	-	chr4_1:41504944-41504963	Msa0547960:three_prime_UTR	50.0%
!!	GTTTCAGGTTTGAAGGTGGC+GGG	-	chr4_1:41504945-41504964	Msa0547960:three_prime_UTR	50.0%
	CTTCACCCTGATCTCAAACG+TGG	-	chr4_1:41505116-41505135	Msa0547960:three_prime_UTR	50.0%
	ATTGCAGTACAGTGCTGCAG+CGG	-	chr4_1:41505479-41505498	Msa0547960:CDS	50.0%
	ACTTGAATCCTCTACGGCAG+CGG	+	chr4_1:41505563-41505582	None:intergenic	50.0%
	GCGAGGACTTGAATCCTCTA+CGG	+	chr4_1:41505569-41505588	None:intergenic	50.0%
	TGATGACCGTGATTGTGCTG+TGG	-	chr4_1:41505608-41505627	Msa0547960:CDS	50.0%
	TTTATGTCTCCGCGACTCCA+AGG	+	chr4_1:41505634-41505653	None:intergenic	50.0%
!!	GGTTTCAGGTTTGAAGGTGG+CGG	-	chr4_1:41504944-41504963	Msa0547960:three_prime_UTR	50.0%
!!	GTTTCAGGTTTGAAGGTGGC+GGG	-	chr4_1:41504945-41504964	Msa0547960:three_prime_UTR	50.0%
	CTTCACCCTGATCTCAAACG+TGG	-	chr4_1:41505116-41505135	Msa0547960:three_prime_UTR	50.0%
	ATTGCAGTACAGTGCTGCAG+CGG	-	chr4_1:41505479-41505498	Msa0547960:CDS	50.0%
	ACTTGAATCCTCTACGGCAG+CGG	+	chr4_1:41505563-41505582	None:intergenic	50.0%
	GCGAGGACTTGAATCCTCTA+CGG	+	chr4_1:41505569-41505588	None:intergenic	50.0%
	TGATGACCGTGATTGTGCTG+TGG	-	chr4_1:41505608-41505627	Msa0547960:CDS	50.0%
	TTTATGTCTCCGCGACTCCA+AGG	+	chr4_1:41505634-41505653	None:intergenic	50.0%
!	GCATAAGCCCCTTTTGAGCG+AGG	+	chr4_1:41505586-41505605	None:intergenic	55.0%
	CCAAGGCCACAGCACAATCA+CGG	+	chr4_1:41505617-41505636	None:intergenic	55.0%
!	GCATAAGCCCCTTTTGAGCG+AGG	+	chr4_1:41505586-41505605	None:intergenic	55.0%
	CCAAGGCCACAGCACAATCA+CGG	+	chr4_1:41505617-41505636	None:intergenic	55.0%
	CTCTACTACCGCTGCCGTAG+AGG	-	chr4_1:41505552-41505571	Msa0547960:CDS	60.0%
	CCGTGATTGTGCTGTGGCCT+TGG	-	chr4_1:41505614-41505633	Msa0547960:CDS	60.0%
	CTCTACTACCGCTGCCGTAG+AGG	-	chr4_1:41505552-41505571	Msa0547960:CDS	60.0%
	CCGTGATTGTGCTGTGGCCT+TGG	-	chr4_1:41505614-41505633	Msa0547960:CDS	60.0%
!	GTGCTGTGGCCTTGGAGTCG+CGG	-	chr4_1:41505622-41505641	Msa0547960:CDS	65.0%
!	GTGCTGTGGCCTTGGAGTCG+CGG	-	chr4_1:41505622-41505641	Msa0547960:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_1	gene	41504834	41506637	41504834	ID=Msa0547960;Name=Msa0547960
chr4_1	mRNA	41504834	41506637	41504834	ID=Msa0547960-mRNA-1;Parent=Msa0547960;Name=Msa0547960-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0\|0.5\|0.66\|1\|1\|1\|3\|350\|253
chr4_1	exon	41504834	41505697	41504834	ID=Msa0547960-mRNA-1:exon:10704;Parent=Msa0547960-mRNA-1
chr4_1	exon	41506273	41506402	41506273	ID=Msa0547960-mRNA-1:exon:10703;Parent=Msa0547960-mRNA-1
chr4_1	exon	41506520	41506637	41506520	ID=Msa0547960-mRNA-1:exon:10702;Parent=Msa0547960-mRNA-1
chr4_1	CDS	41506520	41506637	41506520	ID=Msa0547960-mRNA-1:cds;Parent=Msa0547960-mRNA-1
chr4_1	CDS	41506273	41506402	41506273	ID=Msa0547960-mRNA-1:cds;Parent=Msa0547960-mRNA-1
chr4_1	CDS	41505184	41505697	41505184	ID=Msa0547960-mRNA-1:cds;Parent=Msa0547960-mRNA-1
chr4_1	three_prime_UTR	41504834	41505183	41504834	ID=Msa0547960-mRNA-1:three_prime_utr;Parent=Msa0547960-mRNA-1

Gene Sequence

>Msa0547960

ATGGTTTCACAAGAAATAAGCAGAAAAGGTCCATGGACAGAACAAGAAGATTACAAATTGGCATATTTTGTAGGGTTATTTGGTGATCGTAGATGGGATTTTATAGCAAAGGTTTCAGGTTTGAGTAGATCAGGTAAGAGTTGCAGGTTACGTTGGGTTAATTATCTTCACCCTGATCTCAAACGTGGCAAGATGACACCCCAAGAAGAAACACTTGTTATGGAACTTCACTCTAAATGGGGAAATAGATGGTCAAGAATTGCTAGAAAACTACCAGGAAGAACAGACAATGAGATTAAGAATTACTGGAGGACACACATGAGAAAAAAGAGGGCACAGGAGAAAAAACATGCAACACCTTCGATTTCATCGTCACCTGATCAATCTTCTAGTTGCCAATCCTCACATTTCTCAAACAGTAACCATGGTGTGGATTCACATGCTTCCAACAAAGAGTCTGAAGAAGAAAATTACCAAGTACAAGAAATTGAACAAGGGTACTCAATGGATGATATATGGAAAGATATTGCTATGTCTGAAGATGACATCAATGTTCTTCAACCTGTTCTTGATGGAACTAGTGAAGAGAATAGTAATAATTTATCTTGTCCTATAATGCCTTCTACATCATCATGGGATTATTCATATTTAGATCCATTGTGGGTGATGGATGAAGAAGAAAGCAAGATGTTATTCCCTCCTTTTGGTGACCAATATTTTTCCTTCTATGATCAACAAGGGAACACATTTCTAACTGGTTAA

Protein sequence

>Msa0547960

MVSQEISRKGPWTEQEDYKLAYFVGLFGDRRWDFIAKVSGLSRSGKSCRLRWVNYLHPDLKRGKMTPQEETLVMELHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKRAQEKKHATPSISSSPDQSSSCQSSHFSNSNHGVDSHASNKESEEENYQVQEIEQGYSMDDIWKDIAMSEDDINVLQPVLDGTSEENSNNLSCPIMPSTSSWDYSYLDPLWVMDEEESKMLFPPFGDQYFSFYDQQGNTFLTG*