Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0204210 | XP_003595434.1 | 95.464 | 507 | 23 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1002 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0204210 | sp|Q42456|ASPR1_ORYSJ | 49.593 | 492 | 234 | 4 | 24 | 507 | 24 | 509 | 0.0 | 538 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0204210 | G7IQG4 | 95.464 | 507 | 23 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1002 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042410 | Msa0204210 | 0.814094 | 1.834906e-51 | -8.615850e-47 |
| Msa0055590 | Msa0204210 | 0.801101 | 1.055311e-48 | -8.615850e-47 |
| Msa0079650 | Msa0204210 | 0.802698 | 4.959734e-49 | -8.615850e-47 |
| Msa0170320 | Msa0204210 | 0.812048 | 5.158100e-51 | -8.615850e-47 |
| Msa0204210 | Msa0244740 | 0.811286 | 7.554111e-51 | -8.615850e-47 |
| Msa0204210 | Msa0247420 | 0.835603 | 1.523956e-56 | -8.615850e-47 |
| Msa0204210 | Msa0260910 | 0.809144 | 2.188145e-50 | -8.615850e-47 |
| Msa0204210 | Msa0299200 | 0.814875 | 1.232997e-51 | -8.615850e-47 |
| Msa0204210 | Msa0331920 | 0.827560 | 1.462809e-54 | -8.615850e-47 |
| Msa0204210 | Msa0356880 | 0.808732 | 2.680780e-50 | -8.615850e-47 |
| Msa0204210 | Msa0439700 | 0.822117 | 2.812342e-53 | -8.615850e-47 |
| Msa0204210 | Msa0440040 | 0.838373 | 2.989415e-57 | -8.615850e-47 |
| Msa0204210 | Msa0492740 | 0.819225 | 1.298512e-52 | -8.615850e-47 |
| Msa0204210 | Msa0492880 | 0.836011 | 1.201709e-56 | -8.615850e-47 |
| Msa0204210 | Msa0498220 | 0.820189 | 7.823134e-53 | -8.615850e-47 |
| Msa0204210 | Msa0533050 | 0.814563 | 1.445732e-51 | -8.615850e-47 |
| Msa0204210 | Msa0547960 | 0.818104 | 2.332350e-52 | -8.615850e-47 |
| Msa0204210 | Msa0584070 | 0.803109 | 4.077759e-49 | -8.615850e-47 |
| Msa0204210 | Msa0592540 | 0.822753 | 2.000661e-53 | -8.615850e-47 |
| Msa0204210 | Msa0635470 | 0.812588 | 3.931172e-51 | -8.615850e-47 |
| Msa0204210 | Msa0664020 | 0.804727 | 1.880400e-49 | -8.615850e-47 |
| Msa0204210 | Msa0688550 | 0.816776 | 4.645689e-52 | -8.615850e-47 |
| Msa0204210 | Msa0715720 | 0.831581 | 1.539595e-55 | -8.615850e-47 |
| Msa0204210 | Msa0722930 | 0.805067 | 1.596740e-49 | -8.615850e-47 |
| Msa0204210 | Msa0723140 | 0.815878 | 7.375347e-52 | -8.615850e-47 |
| Msa0204210 | Msa0723320 | 0.825086 | 5.677770e-54 | -8.615850e-47 |
| Msa0204210 | Msa0723330 | 0.839654 | 1.392408e-57 | -8.615850e-47 |
| Msa0204210 | Msa0723430 | 0.830613 | 2.660905e-55 | -8.615850e-47 |
| Msa0204210 | Msa0723440 | 0.836959 | 6.891445e-57 | -8.615850e-47 |
| Msa0204210 | Msa0734510 | 0.800522 | 1.385359e-48 | -8.615850e-47 |
| Msa0204210 | Msa0776030 | 0.825701 | 4.060577e-54 | -8.615850e-47 |
| Msa0204210 | Msa0801710 | 0.808132 | 3.598880e-50 | -8.615850e-47 |
| Msa0204210 | Msa0802470 | -0.805674 | 1.191280e-49 | -8.615850e-47 |
| Msa0204210 | Msa0839330 | 0.836313 | 1.006832e-56 | -8.615850e-47 |
| Msa0204210 | Msa0885320 | 0.806399 | 8.384755e-50 | -8.615850e-47 |
| Msa0204210 | Msa0951720 | 0.801544 | 8.566289e-49 | -8.615850e-47 |
| Msa0204210 | Msa1068200 | -0.811740 | 6.019393e-51 | -8.615850e-47 |
| Msa0204210 | Msa1081710 | 0.831424 | 1.682105e-55 | -8.615850e-47 |
| Msa0204210 | Msa1083410 | 0.811999 | 5.285158e-51 | -8.615850e-47 |
| Msa0204210 | Msa1128160 | 0.810542 | 1.094536e-50 | -8.615850e-47 |
| Msa0204210 | Msa1155470 | 0.814701 | 1.347541e-51 | -8.615850e-47 |
| Msa0204210 | Msa1156340 | -0.801370 | 9.297244e-49 | -8.615850e-47 |
| Msa0204210 | Msa1165360 | 0.811087 | 8.341151e-51 | -8.615850e-47 |
| Msa0204210 | Msa1209560 | 0.826295 | 2.933484e-54 | -8.615850e-47 |
| Msa0204210 | Msa1246040 | 0.836056 | 1.170055e-56 | -8.615850e-47 |
| Msa0204210 | Msa1322890 | 0.803380 | 3.584292e-49 | -8.615850e-47 |
| Msa0204210 | Msa1330530 | 0.801122 | 1.045006e-48 | -8.615850e-47 |
| Msa0204210 | Msa1365040 | -0.804359 | 2.243233e-49 | -8.615850e-47 |
| Msa0204210 | Msa1393330 | 0.814734 | 1.324622e-51 | -8.615850e-47 |
| Msa0204210 | Msa1393410 | 0.806221 | 9.137184e-50 | -8.615850e-47 |
| Msa0204210 | Msa1418580 | 0.809424 | 1.905107e-50 | -8.615850e-47 |
| Msa0204210 | Msa1435420 | 0.804126 | 2.508790e-49 | -8.615850e-47 |
| Msa0204210 | Msa1457020 | 0.804153 | 2.476457e-49 | -8.615850e-47 |
| Msa0204210 | Msa1457070 | 0.812638 | 3.833240e-51 | -8.615850e-47 |
| Msa0204210 | Msa1457670 | -0.809668 | 1.688760e-50 | -8.615850e-47 |
| Msa0204210 | Msa1466810 | 0.811747 | 5.998427e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0204210 | MtrunA17_Chr2g0302421 | 95.418 | 502 | 23 | 0 | 6 | 507 | 1 | 502 | 0.0 | 993 |
| Msa0204210 | MtrunA17_Chr4g0069631 | 66.667 | 507 | 159 | 2 | 1 | 507 | 1 | 497 | 0.0 | 734 |
| Msa0204210 | MtrunA17_Chr7g0271351 | 52.849 | 509 | 233 | 4 | 1 | 507 | 1 | 504 | 0.0 | 565 |
| Msa0204210 | MtrunA17_Chr1g0193211 | 51.267 | 513 | 239 | 5 | 1 | 507 | 1 | 508 | 0.0 | 559 |
| Msa0204210 | MtrunA17_Chr4g0075181 | 47.529 | 526 | 250 | 4 | 1 | 507 | 1 | 519 | 0.0 | 518 |
| Msa0204210 | MtrunA17_Chr2g0288851 | 49.123 | 513 | 252 | 3 | 1 | 507 | 1 | 510 | 6.19e-179 | 512 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0204210 | AT1G11910.1 | 50.198 | 504 | 239 | 5 | 7 | 507 | 12 | 506 | 0.0 | 528 |
| Msa0204210 | AT1G11910.2 | 50.198 | 504 | 239 | 5 | 7 | 507 | 23 | 517 | 0.0 | 527 |
| Msa0204210 | AT1G62290.1 | 49.597 | 496 | 236 | 4 | 20 | 506 | 22 | 512 | 0.0 | 526 |
| Msa0204210 | AT1G62290.2 | 49.597 | 496 | 236 | 4 | 20 | 506 | 22 | 512 | 0.0 | 526 |
| Msa0204210 | AT1G62290.5 | 49.574 | 470 | 223 | 4 | 20 | 480 | 22 | 486 | 2.44e-171 | 492 |
| Msa0204210 | AT4G04460.1 | 45.686 | 510 | 265 | 5 | 2 | 507 | 7 | 508 | 1.18e-170 | 491 |
| Msa0204210 | AT4G04460.2 | 45.490 | 510 | 262 | 6 | 2 | 507 | 7 | 504 | 5.28e-168 | 484 |
| Msa0204210 | AT1G62290.6 | 49.425 | 435 | 213 | 2 | 20 | 447 | 22 | 456 | 4.10e-159 | 460 |
| Msa0204210 | AT1G62290.4 | 49.425 | 435 | 213 | 2 | 20 | 447 | 22 | 456 | 4.10e-159 | 460 |
| Msa0204210 | AT1G62290.3 | 49.242 | 396 | 194 | 2 | 20 | 408 | 22 | 417 | 2.72e-140 | 410 |
| Msa0204210 | AT4G22050.1 | 41.224 | 245 | 136 | 7 | 68 | 308 | 34 | 274 | 1.19e-46 | 166 |
| Msa0204210 | AT1G69100.1 | 36.260 | 262 | 151 | 8 | 57 | 307 | 24 | 280 | 2.50e-40 | 149 |
| Msa0204210 | AT1G69100.2 | 36.719 | 256 | 146 | 8 | 63 | 307 | 38 | 288 | 2.73e-40 | 149 |
Find 121 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTTGATGTACAATATTA+TGG | 0.141197 | 2_1:-29123194 | Msa0204210:CDS |
| TATGATGAAGGATACATTTA+TGG | 0.177344 | 2_1:-29122798 | Msa0204210:CDS |
| AAAGTTACCAATTTCGTTAT+AGG | 0.198459 | 2_1:+29122912 | None:intergenic |
| TTAACACTTCAAGAATTAAT+AGG | 0.208662 | 2_1:-29123289 | Msa0204210:CDS |
| GATAGAACAAGGGCATATTT+TGG | 0.210982 | 2_1:-29122122 | Msa0204210:CDS |
| TATACTTGGACTTGGATTTC+AGG | 0.221417 | 2_1:-29122563 | Msa0204210:CDS |
| TTGGATTTGGTCTCTATCTT+TGG | 0.223238 | 2_1:-29123381 | Msa0204210:CDS |
| CAATAACCCTCTTGAGAAAT+TGG | 0.237329 | 2_1:+29121989 | None:intergenic |
| ATGTCAGCACATAAGATTTC+AGG | 0.241847 | 2_1:+29120647 | None:intergenic |
| GAGAGTGTTGATACAAATTA+TGG | 0.243779 | 2_1:-29123245 | Msa0204210:CDS |
| CAATTTCTCAAGAGGGTTAT+TGG | 0.244036 | 2_1:-29121988 | Msa0204210:CDS |
| ACACTGGTAGCTCTAATCTT+TGG | 0.244114 | 2_1:-29123124 | Msa0204210:CDS |
| TTTCTCCCTGTGGTTTAATA+AGG | 0.248593 | 2_1:-29122092 | Msa0204210:CDS |
| CAAAAGAGACTCTCTCTTAA+TGG | 0.252205 | 2_1:+29120453 | None:intergenic |
| ATATGGGAATCATTGATTTC+AGG | 0.264136 | 2_1:-29120918 | Msa0204210:CDS |
| GTACAATATTATGGGGAAAT+TGG | 0.264754 | 2_1:-29123185 | Msa0204210:CDS |
| CACTGGTAGCTCTAATCTTT+GGG | 0.265139 | 2_1:-29123123 | Msa0204210:CDS |
| TGCTGGTTGTTACATGTCTT+TGG | 0.282305 | 2_1:-29123400 | Msa0204210:CDS |
| ATTAGACTTTGTTCAGATAA+TGG | 0.288447 | 2_1:-29120626 | Msa0204210:CDS |
| TAGATAATGTCTACTGGTTT+AGG | 0.297014 | 2_1:-29119214 | Msa0204210:three_prime_UTR |
| TCTAGCACCTATAACGAAAT+TGG | 0.300382 | 2_1:-29122919 | Msa0204210:intron |
| GTTATAGGTGCTAGATATTC+CGG | 0.305438 | 2_1:+29122927 | None:intergenic |
| CTTCCATTTGATGGTATACT+TGG | 0.310582 | 2_1:-29122577 | Msa0204210:CDS |
| CTTGAAATACAAACCTGTTC+TGG | 0.319928 | 2_1:+29119834 | None:intergenic |
| CCACACATTACATTCACATT+TGG | 0.326867 | 2_1:-29119879 | Msa0204210:CDS |
| TTGTTACATGTCTTTGGATT+TGG | 0.336597 | 2_1:-29123394 | Msa0204210:CDS |
| TTTATAAATGATTGTCCAAC+TGG | 0.340576 | 2_1:+29119924 | None:intergenic |
| AATGATTGTCCAACTGGATT+CGG | 0.343520 | 2_1:+29119930 | None:intergenic |
| ATAACTACGGAAATTCGATA+TGG | 0.362943 | 2_1:-29120935 | Msa0204210:CDS |
| ACTTTGATGTACAATATTAT+GGG | 0.366765 | 2_1:-29123193 | Msa0204210:CDS |
| TAACACTTCAAGAATTAATA+GGG | 0.369285 | 2_1:-29123288 | Msa0204210:CDS |
| AATACTCACACTCACTGATA+TGG | 0.376145 | 2_1:+29117375 | None:intergenic |
| ATATCGAATTTCCGTAGTTA+TGG | 0.381442 | 2_1:+29120937 | None:intergenic |
| TATTAATTCTTGAAGTGTTA+AGG | 0.389834 | 2_1:+29123291 | None:intergenic |
| GCTTATACAATTTCTAATGA+TGG | 0.391047 | 2_1:-29123359 | Msa0204210:CDS |
| TATTATGGGGAAATTGGTAT+TGG | 0.391129 | 2_1:-29123179 | Msa0204210:CDS |
| GTTTCCTCTCTCTCCAGAAC+AGG | 0.392495 | 2_1:-29119847 | Msa0204210:intron |
| GCCAAGACAATGTAAAAGTT+GGG | 0.392884 | 2_1:-29122767 | Msa0204210:CDS |
| GACTATGCCAATCTCCGTAT+AGG | 0.402149 | 2_1:-29119330 | Msa0204210:CDS |
| CAGATTCTGCAAATCCTATA+CGG | 0.404994 | 2_1:+29119316 | None:intergenic |
| ATGATTGTCCAACTGGATTC+GGG | 0.408544 | 2_1:+29119931 | None:intergenic |
| CTGTGCTGCAATAGTGGACT+CGG | 0.415057 | 2_1:-29121135 | Msa0204210:CDS |
| AATAAATATAACCATGCTAC+TGG | 0.416409 | 2_1:+29123730 | None:intergenic |
| TATGGGAATCATTGATTTCA+GGG | 0.417684 | 2_1:-29120917 | Msa0204210:CDS |
| TGCAAATCCTATACGGAGAT+TGG | 0.422114 | 2_1:+29119323 | None:intergenic |
| TTTGCAATATGGTTGTCCTT+TGG | 0.425536 | 2_1:-29120425 | Msa0204210:CDS |
| TCTTGATGTTCCTTCGCCAC+AGG | 0.426838 | 2_1:-29119522 | Msa0204210:CDS |
| TCGGGGACTACTTTAATTGC+CGG | 0.429816 | 2_1:-29121116 | Msa0204210:CDS |
| ATATGTACGTGCAGGGTTGT+TGG | 0.452379 | 2_1:-29119387 | Msa0204210:intron |
| TTTGATGGTATACTTGGACT+TGG | 0.456207 | 2_1:-29122571 | Msa0204210:CDS |
| AGCCAAGACAATGTAAAAGT+TGG | 0.457098 | 2_1:-29122768 | Msa0204210:CDS |
| CTACTTGCAAATAATACAAC+AGG | 0.464850 | 2_1:-29121863 | Msa0204210:intron |
| CAGTGGTGCATAATGAAAGT+TGG | 0.466959 | 2_1:-29120485 | Msa0204210:CDS |
| GGGTGGCTGTGCTGCAATAG+TGG | 0.468506 | 2_1:-29121141 | Msa0204210:CDS |
| GGATTTCAGGATGTTTCAGT+TGG | 0.471759 | 2_1:-29122550 | Msa0204210:CDS |
| AGTCCAAGTATACCATCAAA+TGG | 0.476577 | 2_1:+29122574 | None:intergenic |
| TTCTCAAGAGGGTTATTGGC+AGG | 0.482133 | 2_1:-29121984 | Msa0204210:intron |
| TGAGATTGTCTTTGGTGGTG+TGG | 0.485274 | 2_1:-29122047 | Msa0204210:CDS |
| TAAATGTATCCTTCATCATA+CGG | 0.487406 | 2_1:+29122801 | None:intergenic |
| TTTCATTCGAAGTATAGGTC+CGG | 0.496490 | 2_1:-29122946 | Msa0204210:CDS |
| TGCGAAATCCCGTATGATGA+AGG | 0.497898 | 2_1:-29122810 | Msa0204210:CDS |
| AGGATCCAATGGCAGAAGTA+GGG | 0.499125 | 2_1:-29122072 | Msa0204210:CDS |
| TATTTATATTATATTATGAA+AGG | 0.502323 | 2_1:-29123711 | Msa0204210:five_prime_UTR |
| AACCATGCCATTGGAACAGA+AGG | 0.503270 | 2_1:-29120990 | Msa0204210:CDS |
| GAGAAGATGCATCTTGAAGA+TGG | 0.504280 | 2_1:+29123098 | None:intergenic |
| ATAACAGTATAGATTATGTA+AGG | 0.507420 | 2_1:-29119260 | Msa0204210:three_prime_UTR |
| GATTTCAGGATGTTTCAGTT+GGG | 0.511773 | 2_1:-29122549 | Msa0204210:CDS |
| CTTGATGTTCCTTCGCCACA+GGG | 0.513344 | 2_1:-29119521 | Msa0204210:CDS |
| AGTGGTGCATAATGAAAGTT+GGG | 0.513363 | 2_1:-29120484 | Msa0204210:CDS |
| TAACTACGGAAATTCGATAT+GGG | 0.515650 | 2_1:-29120934 | Msa0204210:CDS |
| ACTCAAATTAACCATGCCAT+TGG | 0.518999 | 2_1:-29120999 | Msa0204210:CDS |
| AAGGATCCAATGGCAGAAGT+AGG | 0.522263 | 2_1:-29122073 | Msa0204210:CDS |
| CTTCGCCACAGGGTCCCCTC+TGG | 0.522418 | 2_1:-29119511 | Msa0204210:intron |
| TTGGATCCTTATTAAACCAC+AGG | 0.527378 | 2_1:+29122086 | None:intergenic |
| TTTCTTGCAGGCATATCATA+CGG | 0.528536 | 2_1:-29119358 | Msa0204210:CDS |
| AACAAATCCTTCTGTTCCAA+TGG | 0.528562 | 2_1:+29120983 | None:intergenic |
| AACATTCTTGTCCAGTAGCA+TGG | 0.531676 | 2_1:-29123741 | Msa0204210:five_prime_UTR |
| ATCCTTCTGTTCCAATGGCA+TGG | 0.535909 | 2_1:+29120988 | None:intergenic |
| GATTAAGCAAAGCAATGTAA+AGG | 0.536096 | 2_1:-29120391 | Msa0204210:CDS |
| TACTTTCCAATTTCTCAAGA+GGG | 0.541272 | 2_1:-29121995 | Msa0204210:CDS |
| TGTTCTCCTGTGTGCTATAG+CGG | 0.548629 | 2_1:-29119554 | Msa0204210:CDS |
| TTACTTTCCAATTTCTCAAG+AGG | 0.549803 | 2_1:-29121996 | Msa0204210:CDS |
| AATATGTAGATAATGTCTAC+TGG | 0.555773 | 2_1:-29119220 | Msa0204210:three_prime_UTR |
| TGTGCTGCAATAGTGGACTC+GGG | 0.559334 | 2_1:-29121134 | Msa0204210:CDS |
| CAGAGGGGACCCTGTGGCGA+AGG | 0.559879 | 2_1:+29119512 | None:intergenic |
| GAGATGATATACAGTTGGAC+CGG | 0.561077 | 2_1:+29121097 | None:intergenic |
| CTTTGATGTACAATATTATG+GGG | 0.566529 | 2_1:-29123192 | Msa0204210:CDS |
| AAATGTATCCTTCATCATAC+GGG | 0.566577 | 2_1:+29122802 | None:intergenic |
| GTGGTTTAATAAGGATCCAA+TGG | 0.569831 | 2_1:-29122083 | Msa0204210:CDS |
| TTCAATGTTGTGTTTGACAC+TGG | 0.573693 | 2_1:-29123140 | Msa0204210:CDS |
| CAAACCTGTTCTGGAGAGAG+AGG | 0.576097 | 2_1:+29119843 | None:intergenic |
| TTGTATCTGCAGATTGAAGT+GGG | 0.578198 | 2_1:-29121893 | Msa0204210:intron |
| GATGAGTTTGAAGTATATGC+TGG | 0.581629 | 2_1:-29123417 | Msa0204210:CDS |
| GAGAAATTGGAAAGTAAGTG+TGG | 0.591719 | 2_1:+29122002 | None:intergenic |
| GGATCCAATGGCAGAAGTAG+GGG | 0.593267 | 2_1:-29122071 | Msa0204210:CDS |
| CCAAGACAATGTAAAAGTTG+GGG | 0.597378 | 2_1:-29122766 | Msa0204210:CDS |
| GTATCTGCAGATTGAAGTGG+GGG | 0.601539 | 2_1:-29121891 | Msa0204210:intron |
| TCTTTGGTGGTGTGGACAAG+AGG | 0.608923 | 2_1:-29122039 | Msa0204210:CDS |
| AGGTATAATATGATAGAACA+AGG | 0.611964 | 2_1:-29122133 | Msa0204210:CDS |
| GTGCATAATGAAAGTTGGGA+TGG | 0.614926 | 2_1:-29120480 | Msa0204210:CDS |
| ATGGGAATCATTGATTTCAG+GGG | 0.615119 | 2_1:-29120916 | Msa0204210:intron |
| ATCTGCAAATATTACCACAC+TGG | 0.620524 | 2_1:+29122517 | None:intergenic |
| TTTGTATCTGCAGATTGAAG+TGG | 0.623910 | 2_1:-29121894 | Msa0204210:intron |
| TCATCATACGGGATTTCGCA+CGG | 0.632424 | 2_1:+29122813 | None:intergenic |
| AACACAACATTGAAATACTG+TGG | 0.632514 | 2_1:+29123149 | None:intergenic |
| AGTATTAAAATATGTCGATG+AGG | 0.637042 | 2_1:-29120364 | Msa0204210:intron |
| CTTAGAGTTGAATCAGACGA+TGG | 0.639754 | 2_1:-29119581 | Msa0204210:CDS |
| GTGCTGCAATAGTGGACTCG+GGG | 0.644938 | 2_1:-29121133 | Msa0204210:CDS |
| GAGAGGCTCCCGAATCCAGT+TGG | 0.647632 | 2_1:-29119939 | Msa0204210:CDS |
| TTTACAGGTTTATGTCAGGG+TGG | 0.650609 | 2_1:-29121158 | Msa0204210:intron |
| GATCCAATGGCAGAAGTAGG+GGG | 0.653154 | 2_1:-29122070 | Msa0204210:CDS |
| TGGATCCTTATTAAACCACA+GGG | 0.670019 | 2_1:+29122087 | None:intergenic |
| GGTATAATATGATAGAACAA+GGG | 0.676046 | 2_1:-29122132 | Msa0204210:CDS |
| TGTATCTGCAGATTGAAGTG+GGG | 0.691045 | 2_1:-29121892 | Msa0204210:intron |
| CAGTGATGTTATTGAAACAG+TGG | 0.692257 | 2_1:-29120502 | Msa0204210:CDS |
| CCAAATGTGAATGTAATGTG+TGG | 0.707394 | 2_1:+29119879 | None:intergenic |
| ACAACATTGAAATACTGTGG+TGG | 0.711005 | 2_1:+29123152 | None:intergenic |
| ACAAAACCGCTATAGCACAC+AGG | 0.717803 | 2_1:+29119548 | None:intergenic |
| TTGGGAAAGTCACACCAGTG+TGG | 0.728601 | 2_1:-29122531 | Msa0204210:intron |
| TATTACCAGAGGGGACCCTG+TGG | 0.743695 | 2_1:+29119506 | None:intergenic |
| ATAAGTATGTATTACCAGAG+GGG | 0.759263 | 2_1:+29119497 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTGCCAAAA+AGG | - | chr2_1:29117331-29117350 | Msa0204210:three_prime_UTR | 15.0% |
| !!! | TAAATTTTTATATGCTTCTT+TGG | - | chr2_1:29118443-29118462 | Msa0204210:intron | 15.0% |
| !! | TTATTTAAATTACTGAAAAG+TGG | - | chr2_1:29118668-29118687 | Msa0204210:intron | 15.0% |
| !! | ATTTCTATATATTTCTTGAA+AGG | - | chr2_1:29119432-29119451 | Msa0204210:intron | 15.0% |
| !!! | CTGTTTTATTTAAATTACAA+AGG | - | chr2_1:29120817-29120836 | Msa0204210:intron | 15.0% |
| !!! | ATAACTTTATTTATCCAATT+AGG | - | chr2_1:29121111-29121130 | Msa0204210:CDS | 15.0% |
| !! | TCTTGATTAAAAAACATATA+TGG | - | chr2_1:29122015-29122034 | Msa0204210:CDS | 15.0% |
| !!! | TATCATTTCTATTTTCATTA+TGG | + | chr2_1:29122483-29122502 | None:intergenic | 15.0% |
| !! | GAAACTGAAAACTATAAATA+TGG | - | chr2_1:29117598-29117617 | Msa0204210:intron | 20.0% |
| !!! | TATTAATTCTTGAAGTGTTA+AGG | + | chr2_1:29117834-29117853 | None:intergenic | 20.0% |
| !! | TTAACACTTCAAGAATTAAT+AGG | - | chr2_1:29117833-29117852 | Msa0204210:intron | 20.0% |
| !! | TAACACTTCAAGAATTAATA+GGG | - | chr2_1:29117834-29117853 | Msa0204210:intron | 20.0% |
| !! | TACTTTGATGTACAATATTA+TGG | - | chr2_1:29117928-29117947 | Msa0204210:intron | 20.0% |
| !! | ACTTTGATGTACAATATTAT+GGG | - | chr2_1:29117929-29117948 | Msa0204210:intron | 20.0% |
| !!! | TTTTTGCATAATTTCATCTT+CGG | - | chr2_1:29118107-29118126 | Msa0204210:intron | 20.0% |
| !! | CATATAAACACATAACTTAA+AGG | + | chr2_1:29118134-29118153 | None:intergenic | 20.0% |
| !!! | AAAGAAAAAAAATACTGACT+TGG | + | chr2_1:29118398-29118417 | None:intergenic | 20.0% |
| !! | CTAAAAACATGAGAATATAT+CGG | + | chr2_1:29118933-29118952 | None:intergenic | 20.0% |
| !! | AATAAAAGTAAAGAATGACA+TGG | + | chr2_1:29119207-29119226 | None:intergenic | 20.0% |
| !!! | TCTAAAATGACTTTATAAGT+GGG | - | chr2_1:29119803-29119822 | Msa0204210:intron | 20.0% |
| !! | CTAACTAAATTATACAAAAC+TGG | + | chr2_1:29119850-29119869 | None:intergenic | 20.0% |
| !!! | TTTCATCTAAAATTTGGATA+GGG | + | chr2_1:29119873-29119892 | None:intergenic | 20.0% |
| !!! | ATTTCATCTAAAATTTGGAT+AGG | + | chr2_1:29119874-29119893 | None:intergenic | 20.0% |
| !!! | AACTTGTGTAAATATTTTAC+AGG | - | chr2_1:29119949-29119968 | Msa0204210:intron | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | + | chr2_1:29120323-29120342 | None:intergenic | 20.0% |
| !! | AAATTTGAATTAATGAAGCA+CGG | + | chr2_1:29120408-29120427 | None:intergenic | 20.0% |
| !!! | TTTAGAGTAAACATAGATAT+AGG | - | chr2_1:29120849-29120868 | Msa0204210:intron | 20.0% |
| !! | ATTTAGAGACTATATATTCA+AGG | + | chr2_1:29120876-29120895 | None:intergenic | 20.0% |
| !! | TATTCTTATATTCGTTAGTT+TGG | - | chr2_1:29120966-29120985 | Msa0204210:CDS | 20.0% |
| !! | ATAACAGTATAGATTATGTA+AGG | - | chr2_1:29121862-29121881 | Msa0204210:intron | 20.0% |
| !!! | ATTTTCCTGATTAAAAAACA+TGG | - | chr2_1:29123798-29123817 | Msa0204210:five_prime_UTR | 20.0% |
| !! | ATAACTTATAACTGCCTTTT+TGG | + | chr2_1:29117348-29117367 | None:intergenic | 25.0% |
| ! | AATAAATATAACCATGCTAC+TGG | + | chr2_1:29117395-29117414 | None:intergenic | 25.0% |
| ! | AAGGTATATTACTCTATGAA+AGG | - | chr2_1:29117430-29117449 | Msa0204210:intron | 25.0% |
| ! | GCTTATACAATTTCTAATGA+TGG | - | chr2_1:29117763-29117782 | Msa0204210:intron | 25.0% |
| ! | CTTTGATGTACAATATTATG+GGG | - | chr2_1:29117930-29117949 | Msa0204210:intron | 25.0% |
| ! | TATCGAATTGAATTCATGAA+CGG | - | chr2_1:29118075-29118094 | Msa0204210:intron | 25.0% |
| ! | AAAGTTACCAATTTCGTTAT+AGG | + | chr2_1:29118213-29118232 | None:intergenic | 25.0% |
| !! | TATAACGAAATTGGTAACTT+TGG | - | chr2_1:29118212-29118231 | Msa0204210:intron | 25.0% |
| !! | TAGCATTTTCGATAATATTC+AGG | - | chr2_1:29118282-29118301 | Msa0204210:intron | 25.0% |
| ! | TAAATGTATCCTTCATCATA+CGG | + | chr2_1:29118324-29118343 | None:intergenic | 25.0% |
| ! | TATGATGAAGGATACATTTA+TGG | - | chr2_1:29118324-29118343 | Msa0204210:intron | 25.0% |
| !!! | TCTTTGGTTTTATTCAAGTT+TGG | - | chr2_1:29118459-29118478 | Msa0204210:intron | 25.0% |
| !!! | ATTATATTTTGGTTGCAGTA+GGG | - | chr2_1:29118889-29118908 | Msa0204210:intron | 25.0% |
| !! | CGATATATTCTCATGTTTTT+AGG | - | chr2_1:29118931-29118950 | Msa0204210:intron | 25.0% |
| ! | AGGTATAATATGATAGAACA+AGG | - | chr2_1:29118989-29119008 | Msa0204210:intron | 25.0% |
| ! | GGTATAATATGATAGAACAA+GGG | - | chr2_1:29118990-29119009 | Msa0204210:intron | 25.0% |
| ! | ATGCTAAATAGAAATGCATA+AGG | + | chr2_1:29119286-29119305 | None:intergenic | 25.0% |
| ! | TTGAAAATGAGTTCATAAGT+GGG | - | chr2_1:29119589-29119608 | Msa0204210:CDS | 25.0% |
| ! | CTAAAACGAACTGAAAATTT+GGG | + | chr2_1:29119664-29119683 | None:intergenic | 25.0% |
| ! | ACTAAAACGAACTGAAAATT+TGG | + | chr2_1:29119665-29119684 | None:intergenic | 25.0% |
| ! | CTCATATATAAGATGAGATA+TGG | - | chr2_1:29119780-29119799 | Msa0204210:intron | 25.0% |
| !! | GTCTAAAATGACTTTATAAG+TGG | - | chr2_1:29119802-29119821 | Msa0204210:intron | 25.0% |
| !!! | TTATACAAAACTGGTTTGTA+AGG | + | chr2_1:29119841-29119860 | None:intergenic | 25.0% |
| !! | AGCGTATTTCATCTAAAATT+TGG | + | chr2_1:29119879-29119898 | None:intergenic | 25.0% |
| !! | AAATTTTAGATGAAATACGC+TGG | - | chr2_1:29119878-29119897 | Msa0204210:CDS | 25.0% |
| ! | ATTTACACAAGTTTATGTTG+TGG | + | chr2_1:29119942-29119961 | None:intergenic | 25.0% |
| !! | ATATTTTACAGGTTTATGTC+AGG | - | chr2_1:29119960-29119979 | Msa0204210:intron | 25.0% |
| !! | TATTTTACAGGTTTATGTCA+GGG | - | chr2_1:29119961-29119980 | Msa0204210:intron | 25.0% |
| !!! | TTTTAGAGATGATATACAGT+TGG | + | chr2_1:29120033-29120052 | None:intergenic | 25.0% |
| ! | AAAAACATTGTCCATAACTA+CGG | - | chr2_1:29120174-29120193 | Msa0204210:intron | 25.0% |
| ! | ATTAGACTTTGTTCAGATAA+TGG | - | chr2_1:29120496-29120515 | Msa0204210:CDS | 25.0% |
| !! | CTTTTGTAGTTTTTGCAATA+TGG | - | chr2_1:29120686-29120705 | Msa0204210:intron | 25.0% |
| ! | AGTATTAAAATATGTCGATG+AGG | - | chr2_1:29120758-29120777 | Msa0204210:intron | 25.0% |
| ! | TAACTATTAGAAGACACTTT+CGG | + | chr2_1:29120922-29120941 | None:intergenic | 25.0% |
| !! | GTTAGTTTAATCATCAAATC+AGG | - | chr2_1:29120938-29120957 | Msa0204210:CDS | 25.0% |
| ! | TTTATAAATGATTGTCCAAC+TGG | + | chr2_1:29121201-29121220 | None:intergenic | 25.0% |
| ! | AAAAGGTTCTACTAAATTAC+TGG | + | chr2_1:29121505-29121524 | None:intergenic | 25.0% |
| ! | AATATGTAGATAATGTCTAC+TGG | - | chr2_1:29121902-29121921 | Msa0204210:intron | 25.0% |
| ! | TGGAAATAAATCAATTGAGT+TGG | - | chr2_1:29122035-29122054 | Msa0204210:CDS | 25.0% |
| ! | GGAAATAAATCAATTGAGTT+GGG | - | chr2_1:29122036-29122055 | Msa0204210:CDS | 25.0% |
| ! | CTCAAACAAGAATGAATAAT+GGG | + | chr2_1:29122085-29122104 | None:intergenic | 25.0% |
| ! | TCTCAAACAAGAATGAATAA+TGG | + | chr2_1:29122086-29122105 | None:intergenic | 25.0% |
| ! | TGTAAACAAATTGATCTAGT+AGG | - | chr2_1:29122109-29122128 | Msa0204210:CDS | 25.0% |
| ! | ACATTGTCATTGAAATTGAA+AGG | + | chr2_1:29122623-29122642 | None:intergenic | 25.0% |
| ! | GTTACTCTAATCAAAATATC+CGG | - | chr2_1:29122648-29122667 | Msa0204210:intron | 25.0% |
| ! | AAGAAGAAGAAGATAATCTT+AGG | + | chr2_1:29123188-29123207 | None:intergenic | 25.0% |
| !! | TTACATTCACTTGCTAATTT+AGG | + | chr2_1:29123263-29123282 | None:intergenic | 25.0% |
| ! | TAAATGATTGTCAAAACCAA+TGG | - | chr2_1:29123369-29123388 | Msa0204210:CDS | 25.0% |
| ACATCATCATCATCATCATA+AGG | - | chr2_1:29117483-29117502 | Msa0204210:intron | 30.0% | |
| ! | TTTGATTTAGTACAAGAAGC+AGG | + | chr2_1:29117538-29117557 | None:intergenic | 30.0% |
| !! | ATCTGTTTCAAGTTTCAACA+TGG | + | chr2_1:29117688-29117707 | None:intergenic | 30.0% |
| TTGTTACATGTCTTTGGATT+TGG | - | chr2_1:29117728-29117747 | Msa0204210:intron | 30.0% | |
| !! | GAGAGTGTTGATACAAATTA+TGG | - | chr2_1:29117877-29117896 | Msa0204210:intron | 30.0% |
| GTACAATATTATGGGGAAAT+TGG | - | chr2_1:29117937-29117956 | Msa0204210:intron | 30.0% | |
| TATTATGGGGAAATTGGTAT+TGG | - | chr2_1:29117943-29117962 | Msa0204210:intron | 30.0% | |
| AACACAACATTGAAATACTG+TGG | + | chr2_1:29117976-29117995 | None:intergenic | 30.0% | |
| !! | GCTATTTTCATTCGAAGTAT+AGG | - | chr2_1:29118171-29118190 | Msa0204210:intron | 30.0% |
| AAATGTATCCTTCATCATAC+GGG | + | chr2_1:29118323-29118342 | None:intergenic | 30.0% | |
| TTGTAATCTCACAAAATTCC+TGG | + | chr2_1:29118499-29118518 | None:intergenic | 30.0% | |
| ! | AGGAATTTTGTGAGATTACA+AGG | - | chr2_1:29118498-29118517 | Msa0204210:intron | 30.0% |
| ! | GGAATTTTGTGAGATTACAA+GGG | - | chr2_1:29118499-29118518 | Msa0204210:intron | 30.0% |
| CTGGTAATAATTTGAGAAAG+TGG | + | chr2_1:29118814-29118833 | None:intergenic | 30.0% | |
| TGACATTGATACATCAATAC+TGG | + | chr2_1:29118833-29118852 | None:intergenic | 30.0% | |
| ! | CGATTCGTGTGATTATATTT+TGG | - | chr2_1:29118878-29118897 | Msa0204210:intron | 30.0% |
| !!! | GATTATATTTTGGTTGCAGT+AGG | - | chr2_1:29118888-29118907 | Msa0204210:intron | 30.0% |
| !! | TTAATCACTGCATGCTTTTT+AGG | + | chr2_1:29118957-29118976 | None:intergenic | 30.0% |
| TTACTTTCCAATTTCTCAAG+AGG | - | chr2_1:29119126-29119145 | Msa0204210:intron | 30.0% | |
| TACTTTCCAATTTCTCAAGA+GGG | - | chr2_1:29119127-29119146 | Msa0204210:intron | 30.0% | |
| CTACTTGCAAATAATACAAC+AGG | - | chr2_1:29119259-29119278 | Msa0204210:three_prime_UTR | 30.0% | |
| GCTATTGTGTAGAACTAAAA+GGG | - | chr2_1:29119470-29119489 | Msa0204210:intron | 30.0% | |
| !! | AAATGTTAAGAGTATCGCAT+TGG | - | chr2_1:29119554-29119573 | Msa0204210:CDS | 30.0% |
| CTTGAAAATGAGTTCATAAG+TGG | - | chr2_1:29119588-29119607 | Msa0204210:CDS | 30.0% | |
| !! | TGATTTTGTAGGTTTGAGTT+AGG | - | chr2_1:29119633-29119652 | Msa0204210:intron | 30.0% |
| AAAATGACTTTATAAGTGGG+AGG | - | chr2_1:29119806-29119825 | Msa0204210:intron | 30.0% | |
| CAAGAACTAGTAAGAAGAAA+GGG | + | chr2_1:29120087-29120106 | None:intergenic | 30.0% | |
| ACAAGAACTAGTAAGAAGAA+AGG | + | chr2_1:29120088-29120107 | None:intergenic | 30.0% | |
| !!! | TCTTACTAGTTCTTGTTTTC+AGG | - | chr2_1:29120092-29120111 | Msa0204210:intron | 30.0% |
| !!! | CTTACTAGTTCTTGTTTTCA+GGG | - | chr2_1:29120093-29120112 | Msa0204210:intron | 30.0% |
| ATATCGAATTTCCGTAGTTA+TGG | + | chr2_1:29120188-29120207 | None:intergenic | 30.0% | |
| ATAACTACGGAAATTCGATA+TGG | - | chr2_1:29120187-29120206 | Msa0204210:intron | 30.0% | |
| TAACTACGGAAATTCGATAT+GGG | - | chr2_1:29120188-29120207 | Msa0204210:intron | 30.0% | |
| !! | ATATGGGAATCATTGATTTC+AGG | - | chr2_1:29120204-29120223 | Msa0204210:intron | 30.0% |
| !! | TATGGGAATCATTGATTTCA+GGG | - | chr2_1:29120205-29120224 | Msa0204210:intron | 30.0% |
| AGGAATCAAGAATAAGAAGA+TGG | + | chr2_1:29120547-29120566 | None:intergenic | 30.0% | |
| TGTTAAGTTAGATGTAGCTA+AGG | + | chr2_1:29120582-29120601 | None:intergenic | 30.0% | |
| AACATCACTGCAAGTAAAAT+TGG | + | chr2_1:29120610-29120629 | None:intergenic | 30.0% | |
| ! | TAATCTGATTTTGCATCCAA+AGG | + | chr2_1:29120716-29120735 | None:intergenic | 30.0% |
| GATTAAGCAAAGCAATGTAA+AGG | - | chr2_1:29120731-29120750 | Msa0204210:intron | 30.0% | |
| AACTATTAGAAGACACTTTC+GGG | + | chr2_1:29120921-29120940 | None:intergenic | 30.0% | |
| AACATTCATAGGAAGGAAAA+TGG | + | chr2_1:29121420-29121439 | None:intergenic | 30.0% | |
| ACTCTATAACATTCATAGGA+AGG | + | chr2_1:29121427-29121446 | None:intergenic | 30.0% | |
| ATGCACTCTATAACATTCAT+AGG | + | chr2_1:29121431-29121450 | None:intergenic | 30.0% | |
| TAAAGAAACCAGATACACTA+CGG | + | chr2_1:29121481-29121500 | None:intergenic | 30.0% | |
| ATAAGTATGTATTACCAGAG+GGG | + | chr2_1:29121628-29121647 | None:intergenic | 30.0% | |
| GATAAGTATGTATTACCAGA+GGG | + | chr2_1:29121629-29121648 | None:intergenic | 30.0% | |
| TGATAAGTATGTATTACCAG+AGG | + | chr2_1:29121630-29121649 | None:intergenic | 30.0% | |
| ! | AAAAACAAGAGCATGAAACA+TGG | + | chr2_1:29121681-29121700 | None:intergenic | 30.0% |
| !! | TAGATAATGTCTACTGGTTT+AGG | - | chr2_1:29121908-29121927 | Msa0204210:intron | 30.0% |
| AATACTCATACTCACTGTTA+TGG | + | chr2_1:29121964-29121983 | None:intergenic | 30.0% | |
| ! | ACAAGAATGAATAATGGGAA+TGG | + | chr2_1:29122080-29122099 | None:intergenic | 30.0% |
| AGATTGTTATCCAACTAGAA+AGG | - | chr2_1:29122245-29122264 | Msa0204210:intron | 30.0% | |
| TTATGGTTAATTAGCATGTG+TGG | - | chr2_1:29122322-29122341 | Msa0204210:intron | 30.0% | |
| TATGGTTAATTAGCATGTGT+GGG | - | chr2_1:29122323-29122342 | Msa0204210:intron | 30.0% | |
| AAAATGAAATATATGCGAGC+TGG | - | chr2_1:29122538-29122557 | Msa0204210:CDS | 30.0% | |
| ATTCGTCTTCGCAAATATTA+GGG | - | chr2_1:29122582-29122601 | Msa0204210:CDS | 30.0% | |
| GTCATTGAAATTGAAAGGAT+CGG | + | chr2_1:29122618-29122637 | None:intergenic | 30.0% | |
| !!! | TTAGTAGTTTTTCTGGCTTT+TGG | + | chr2_1:29122680-29122699 | None:intergenic | 30.0% |
| AAAAGCCAGAAAAACTACTA+AGG | - | chr2_1:29122679-29122698 | Msa0204210:intron | 30.0% | |
| ! | TTACACCTTAGTAGTTTTTC+TGG | + | chr2_1:29122687-29122706 | None:intergenic | 30.0% |
| ! | TTCACTTGGTTCAAAAGTAT+CGG | + | chr2_1:29122984-29123003 | None:intergenic | 30.0% |
| TTATTGGATATCAGTTCACT+TGG | + | chr2_1:29122998-29123017 | None:intergenic | 30.0% | |
| CTGATTGATATACCTCTTAT+TGG | + | chr2_1:29123014-29123033 | None:intergenic | 30.0% | |
| ! | CAATAAGAGGTATATCAATC+AGG | - | chr2_1:29123012-29123031 | Msa0204210:intron | 30.0% |
| AGTCTCAAGTTATCAATTGT+AGG | - | chr2_1:29123235-29123254 | Msa0204210:CDS | 30.0% | |
| GTCTCAAGTTATCAATTGTA+GGG | - | chr2_1:29123236-29123255 | Msa0204210:CDS | 30.0% | |
| ! | CATTTATCCGTTGATTGAAT+TGG | + | chr2_1:29123355-29123374 | None:intergenic | 30.0% |
| TCTGATTTATGTTACACCAT+TGG | + | chr2_1:29123388-29123407 | None:intergenic | 30.0% | |
| ! | CTTAATGAAACTCTAGTTCA+TGG | + | chr2_1:29123421-29123440 | None:intergenic | 30.0% |
| ! | AAAAACAAGAGCATGAAACA+TGG | + | chr2_1:29121681-29121700 | None:intergenic | 30.0% |
| CACAGCAGTAAATAATAGTA+TGG | - | chr2_1:29123672-29123691 | Msa0204210:intron | 30.0% | |
| TCATGTGTAGATGATGTTTA+CGG | - | chr2_1:29123695-29123714 | Msa0204210:intron | 30.0% | |
| GCAGGACATAAAGAAATTCA+AGG | + | chr2_1:29117520-29117539 | None:intergenic | 35.0% | |
| ! | GATGAGTTTGAAGTATATGC+TGG | - | chr2_1:29117705-29117724 | Msa0204210:intron | 35.0% |
| ! | TTGGATTTGGTCTCTATCTT+TGG | - | chr2_1:29117741-29117760 | Msa0204210:intron | 35.0% |
| ACAACATTGAAATACTGTGG+TGG | + | chr2_1:29117973-29117992 | None:intergenic | 35.0% | |
| TTCAATGTTGTGTTTGACAC+TGG | - | chr2_1:29117982-29118001 | Msa0204210:intron | 35.0% | |
| TTTCATTCGAAGTATAGGTC+CGG | - | chr2_1:29118176-29118195 | Msa0204210:intron | 35.0% | |
| GTTATAGGTGCTAGATATTC+CGG | + | chr2_1:29118198-29118217 | None:intergenic | 35.0% | |
| TCTAGCACCTATAACGAAAT+TGG | - | chr2_1:29118203-29118222 | Msa0204210:intron | 35.0% | |
| AGCCAAGACAATGTAAAAGT+TGG | - | chr2_1:29118354-29118373 | Msa0204210:intron | 35.0% | |
| GCCAAGACAATGTAAAAGTT+GGG | - | chr2_1:29118355-29118374 | Msa0204210:intron | 35.0% | |
| CCAAGACAATGTAAAAGTTG+GGG | - | chr2_1:29118356-29118375 | Msa0204210:intron | 35.0% | |
| !!! | TTGGTTGTTTTTCATGATCC+AGG | - | chr2_1:29118478-29118497 | Msa0204210:intron | 35.0% |
| ! | TTTTGTGAGATTACAAGGGA+AGG | - | chr2_1:29118503-29118522 | Msa0204210:intron | 35.0% |
| !!! | CTTTTAGCTCTTCCATTTGA+TGG | - | chr2_1:29118536-29118555 | Msa0204210:intron | 35.0% |
| ! | CTTCCATTTGATGGTATACT+TGG | - | chr2_1:29118545-29118564 | Msa0204210:intron | 35.0% |
| AGTCCAAGTATACCATCAAA+TGG | + | chr2_1:29118551-29118570 | None:intergenic | 35.0% | |
| ! | TTTGATGGTATACTTGGACT+TGG | - | chr2_1:29118551-29118570 | Msa0204210:intron | 35.0% |
| TATACTTGGACTTGGATTTC+AGG | - | chr2_1:29118559-29118578 | Msa0204210:intron | 35.0% | |
| GATTTCAGGATGTTTCAGTT+GGG | - | chr2_1:29118573-29118592 | Msa0204210:intron | 35.0% | |
| ATCTGCAAATATTACCACAC+TGG | + | chr2_1:29118608-29118627 | None:intergenic | 35.0% | |
| !! | GTGATTAAGTCTGTTTCTAC+AGG | - | chr2_1:29118969-29118988 | Msa0204210:intron | 35.0% |
| !! | GATAGAACAAGGGCATATTT+TGG | - | chr2_1:29119000-29119019 | Msa0204210:intron | 35.0% |
| TTTCTCCCTGTGGTTTAATA+AGG | - | chr2_1:29119030-29119049 | Msa0204210:intron | 35.0% | |
| TGGATCCTTATTAAACCACA+GGG | + | chr2_1:29119038-29119057 | None:intergenic | 35.0% | |
| TTGGATCCTTATTAAACCAC+AGG | + | chr2_1:29119039-29119058 | None:intergenic | 35.0% | |
| GTGGTTTAATAAGGATCCAA+TGG | - | chr2_1:29119039-29119058 | Msa0204210:intron | 35.0% | |
| GAGAAATTGGAAAGTAAGTG+TGG | + | chr2_1:29119123-29119142 | None:intergenic | 35.0% | |
| CAATAACCCTCTTGAGAAAT+TGG | + | chr2_1:29119136-29119155 | None:intergenic | 35.0% | |
| CAATTTCTCAAGAGGGTTAT+TGG | - | chr2_1:29119134-29119153 | Msa0204210:intron | 35.0% | |
| TTTGTATCTGCAGATTGAAG+TGG | - | chr2_1:29119228-29119247 | Msa0204210:three_prime_UTR | 35.0% | |
| TTGTATCTGCAGATTGAAGT+GGG | - | chr2_1:29119229-29119248 | Msa0204210:three_prime_UTR | 35.0% | |
| TGAAGTTGCTAAAGAATGCA+TGG | - | chr2_1:29119386-29119405 | Msa0204210:intron | 35.0% | |
| GCTAAAGAATGCATGGTATT+AGG | - | chr2_1:29119393-29119412 | Msa0204210:intron | 35.0% | |
| AAAGAATGCATGGTATTAGG+TGG | - | chr2_1:29119396-29119415 | Msa0204210:intron | 35.0% | |
| !! | TGAAAGGCATTCAATTTCCA+TGG | - | chr2_1:29119448-29119467 | Msa0204210:intron | 35.0% |
| !! | TTAGTTCTACACAATAGCCA+TGG | + | chr2_1:29119468-29119487 | None:intergenic | 35.0% |
| GGCTATTGTGTAGAACTAAA+AGG | - | chr2_1:29119469-29119488 | Msa0204210:intron | 35.0% | |
| GTGTGTATCCAAAATACGTT+AGG | - | chr2_1:29119683-29119702 | Msa0204210:intron | 35.0% | |
| ACTCAAATTAACCATGCCAT+TGG | - | chr2_1:29120123-29120142 | Msa0204210:intron | 35.0% | |
| AACAAATCCTTCTGTTCCAA+TGG | + | chr2_1:29120142-29120161 | None:intergenic | 35.0% | |
| !! | ATGGGAATCATTGATTTCAG+GGG | - | chr2_1:29120206-29120225 | Msa0204210:intron | 35.0% |
| TCTCAAATTATTAGCGGTGT+CGG | + | chr2_1:29120317-29120336 | None:intergenic | 35.0% | |
| ATGTCAGCACATAAGATTTC+AGG | + | chr2_1:29120478-29120497 | None:intergenic | 35.0% | |
| AGCTAAGGAATGTGTCATAA+AGG | + | chr2_1:29120567-29120586 | None:intergenic | 35.0% | |
| CAGTGATGTTATTGAAACAG+TGG | - | chr2_1:29120620-29120639 | Msa0204210:CDS | 35.0% | |
| AGTGGTGCATAATGAAAGTT+GGG | - | chr2_1:29120638-29120657 | Msa0204210:CDS | 35.0% | |
| CAAAAGAGACTCTCTCTTAA+TGG | + | chr2_1:29120672-29120691 | None:intergenic | 35.0% | |
| TTTGCAATATGGTTGTCCTT+TGG | - | chr2_1:29120697-29120716 | Msa0204210:intron | 35.0% | |
| AAAGCTTCTGACTTCCTAAT+TGG | + | chr2_1:29121128-29121147 | None:intergenic | 35.0% | |
| AATGATTGTCCAACTGGATT+CGG | + | chr2_1:29121195-29121214 | None:intergenic | 35.0% | |
| CCAAATGTGAATGTAATGTG+TGG | + | chr2_1:29121246-29121265 | None:intergenic | 35.0% | |
| CCACACATTACATTCACATT+TGG | - | chr2_1:29121243-29121262 | Msa0204210:intron | 35.0% | |
| CTTGAAATACAAACCTGTTC+TGG | + | chr2_1:29121291-29121310 | None:intergenic | 35.0% | |
| GAGACTAACAGAAATTCATG+TGG | + | chr2_1:29121350-29121369 | None:intergenic | 35.0% | |
| GAACATACTGAGAAGGAAAA+AGG | + | chr2_1:29121522-29121541 | None:intergenic | 35.0% | |
| ! | ACTCTAAGAACATACTGAGA+AGG | + | chr2_1:29121529-29121548 | None:intergenic | 35.0% |
| TGCACGTACATATATGACTA+CGG | + | chr2_1:29121728-29121747 | None:intergenic | 35.0% | |
| TAGTCATATATGTACGTGCA+GGG | - | chr2_1:29121728-29121747 | Msa0204210:intron | 35.0% | |
| ! | TGTTGGCAATATTTTCTTGC+AGG | - | chr2_1:29121752-29121771 | Msa0204210:intron | 35.0% |
| TTTCTTGCAGGCATATCATA+CGG | - | chr2_1:29121764-29121783 | Msa0204210:intron | 35.0% | |
| CAGATTCTGCAAATCCTATA+CGG | + | chr2_1:29121809-29121828 | None:intergenic | 35.0% | |
| ! | GGTTTAGGTAAGAGTATGTA+AGG | - | chr2_1:29121923-29121942 | Msa0204210:intron | 35.0% |
| ! | ATGAATAATGGGAATGGTGA+GGG | + | chr2_1:29122074-29122093 | None:intergenic | 35.0% |
| ! | AATGAATAATGGGAATGGTG+AGG | + | chr2_1:29122075-29122094 | None:intergenic | 35.0% |
| GAATCCATTTGATTAGAGAC+AGG | + | chr2_1:29122206-29122225 | None:intergenic | 35.0% | |
| !! | AAAAGCATCACCTTTCTAGT+TGG | + | chr2_1:29122258-29122277 | None:intergenic | 35.0% |
| ! | AGAAAGGTGATGCTTTTAAC+AGG | - | chr2_1:29122261-29122280 | Msa0204210:intron | 35.0% |
| ! | TGGTTAGTTGCGAAAGTTTA+TGG | - | chr2_1:29122305-29122324 | Msa0204210:intron | 35.0% |
| GTACGAATAAACTGAAAACG+AGG | + | chr2_1:29122378-29122397 | None:intergenic | 35.0% | |
| CATTCGTCTTCGCAAATATT+AGG | - | chr2_1:29122581-29122600 | Msa0204210:CDS | 35.0% | |
| !! | CAGATTTGACTTGAGTTATC+AGG | + | chr2_1:29122711-29122730 | None:intergenic | 35.0% |
| TTGATTCATGGCATCTGAAT+TGG | + | chr2_1:29122758-29122777 | None:intergenic | 35.0% | |
| !! | AGTCGTAGGTTTTTGATTCA+TGG | + | chr2_1:29122770-29122789 | None:intergenic | 35.0% |
| GAGTGATCTATCAATTGAAG+CGG | - | chr2_1:29122790-29122809 | Msa0204210:CDS | 35.0% | |
| ! | GGATCAAGTTGTAAAAGAAG+TGG | - | chr2_1:29122843-29122862 | Msa0204210:intron | 35.0% |
| GTGAACTGATATCCAATAAG+AGG | - | chr2_1:29122999-29123018 | Msa0204210:intron | 35.0% | |
| TAACGATTGTGGTGCATAAT+TGG | + | chr2_1:29123137-29123156 | None:intergenic | 35.0% | |
| TTGAGACTCACATCATTCTA+TGG | + | chr2_1:29123223-29123242 | None:intergenic | 35.0% | |
| AATTGGTCCGAGTCTATAAT+CGG | + | chr2_1:29123455-29123474 | None:intergenic | 35.0% | |
| GCATCAAGAAACGCATTAAT+TGG | + | chr2_1:29123472-29123491 | None:intergenic | 35.0% | |
| TGATTGATATATCTACGTGC+AGG | - | chr2_1:29123548-29123567 | Msa0204210:intron | 35.0% | |
| GATTGATATATCTACGTGCA+GGG | - | chr2_1:29123549-29123568 | Msa0204210:intron | 35.0% | |
| ! | TGTTGGAGATATTTTCTTGC+AGG | - | chr2_1:29123573-29123592 | Msa0204210:intron | 35.0% |
| TAGATTCCGCAAATCCTATA+CGG | + | chr2_1:29123630-29123649 | None:intergenic | 35.0% | |
| CATGTGTAGATGATGTTTAC+GGG | - | chr2_1:29123696-29123715 | Msa0204210:intron | 35.0% | |
| AATACTCACACTCACTGATA+TGG | + | chr2_1:29123750-29123769 | None:intergenic | 35.0% | |
| AACATTCTTGTCCAGTAGCA+TGG | - | chr2_1:29117381-29117400 | Msa0204210:three_prime_UTR | 40.0% | |
| ! | TGCTGGTTGTTACATGTCTT+TGG | - | chr2_1:29117722-29117741 | Msa0204210:intron | 40.0% |
| !! | ACACTGGTAGCTCTAATCTT+TGG | - | chr2_1:29117998-29118017 | Msa0204210:intron | 40.0% |
| !! | CACTGGTAGCTCTAATCTTT+GGG | - | chr2_1:29117999-29118018 | Msa0204210:intron | 40.0% |
| GAGAAGATGCATCTTGAAGA+TGG | + | chr2_1:29118027-29118046 | None:intergenic | 40.0% | |
| ! | CCCCAACTTTTACATTGTCT+TGG | + | chr2_1:29118359-29118378 | None:intergenic | 40.0% |
| GGATTTCAGGATGTTTCAGT+TGG | - | chr2_1:29118572-29118591 | Msa0204210:intron | 40.0% | |
| CACATGTGTCAGTGTAGTAT+CGG | + | chr2_1:29118775-29118794 | None:intergenic | 40.0% | |
| ATCAATGTCAATGTCGTGTG+TGG | - | chr2_1:29118843-29118862 | Msa0204210:intron | 40.0% | |
| TGTATCTGCAGATTGAAGTG+GGG | - | chr2_1:29119230-29119249 | Msa0204210:three_prime_UTR | 40.0% | |
| GCATGGTATTAGGTGGTTAA+TGG | - | chr2_1:29119403-29119422 | Msa0204210:intron | 40.0% | |
| CAAAATCAGCTCGTAAGGTT+GGG | + | chr2_1:29119621-29119640 | None:intergenic | 40.0% | |
| ACAAAATCAGCTCGTAAGGT+TGG | + | chr2_1:29119622-29119641 | None:intergenic | 40.0% | |
| !! | ACCTTACGAGCTGATTTTGT+AGG | - | chr2_1:29119622-29119641 | Msa0204210:intron | 40.0% |
| ACCTACAAAATCAGCTCGTA+AGG | + | chr2_1:29119626-29119645 | None:intergenic | 40.0% | |
| CTTCAGATGTCAAGTCTAGA+GGG | - | chr2_1:29119736-29119755 | Msa0204210:intron | 40.0% | |
| !! | CAAAACTGGTTTGTAAGGTG+AGG | + | chr2_1:29119836-29119855 | None:intergenic | 40.0% |
| ATGAACATGAGTGCCAACAA+CGG | + | chr2_1:29119906-29119925 | None:intergenic | 40.0% | |
| TTTACAGGTTTATGTCAGGG+TGG | - | chr2_1:29119964-29119983 | Msa0204210:intron | 40.0% | |
| GAGATGATATACAGTTGGAC+CGG | + | chr2_1:29120028-29120047 | None:intergenic | 40.0% | |
| CAGTGGTGCATAATGAAAGT+TGG | - | chr2_1:29120637-29120656 | Msa0204210:CDS | 40.0% | |
| GTGCATAATGAAAGTTGGGA+TGG | - | chr2_1:29120642-29120661 | Msa0204210:CDS | 40.0% | |
| !!! | TTCTTTTAAAGCTGTGCGAG+AGG | - | chr2_1:29121166-29121185 | Msa0204210:intron | 40.0% |
| ATGATTGTCCAACTGGATTC+GGG | + | chr2_1:29121194-29121213 | None:intergenic | 40.0% | |
| GAATGTATCCGTAGTGTATC+TGG | - | chr2_1:29121470-29121489 | Msa0204210:intron | 40.0% | |
| CTTAGAGTTGAATCAGACGA+TGG | - | chr2_1:29121541-29121560 | Msa0204210:intron | 40.0% | |
| GTAGTCATATATGTACGTGC+AGG | - | chr2_1:29121727-29121746 | Msa0204210:intron | 40.0% | |
| TGCAAATCCTATACGGAGAT+TGG | + | chr2_1:29121802-29121821 | None:intergenic | 40.0% | |
| !! | TCAATTGAGTTGGGAATCTG+TGG | - | chr2_1:29122045-29122064 | Msa0204210:CDS | 40.0% |
| ! | ATATGCAAGTTGAGCACAAG+AGG | - | chr2_1:29122148-29122167 | Msa0204210:intron | 40.0% |
| TGAGCACAAGAGGATATATG+TGG | - | chr2_1:29122158-29122177 | Msa0204210:intron | 40.0% | |
| AAGAGGATATATGTGGCTGA+TGG | - | chr2_1:29122165-29122184 | Msa0204210:intron | 40.0% | |
| ! | ATTAGAGACAGGTCACTTTG+AGG | + | chr2_1:29122195-29122214 | None:intergenic | 40.0% |
| GTGACCTGTCTCTAATCAAA+TGG | - | chr2_1:29122199-29122218 | Msa0204210:intron | 40.0% | |
| TAACAGGCACAGTTGTTTGT+CGG | - | chr2_1:29122277-29122296 | Msa0204210:intron | 40.0% | |
| ACAGTTGTTTGTCGGTAGTA+TGG | - | chr2_1:29122285-29122304 | Msa0204210:intron | 40.0% | |
| GTCCACATAAAAACAGCAAG+TGG | - | chr2_1:29122513-29122532 | Msa0204210:intron | 40.0% | |
| !!! | CTCCACTTGCTGTTTTTATG+TGG | + | chr2_1:29122518-29122537 | None:intergenic | 40.0% |
| ATATGCGAGCTGGTAACAAA+AGG | - | chr2_1:29122548-29122567 | Msa0204210:CDS | 40.0% | |
| !!! | TTCTGGCTTTTGGTTCTATC+CGG | + | chr2_1:29122670-29122689 | None:intergenic | 40.0% |
| TTGATAGATCACTCAGTCGT+AGG | + | chr2_1:29122784-29122803 | None:intergenic | 40.0% | |
| ! | AAGCATCGCATTCAGGAATA+AGG | - | chr2_1:29122899-29122918 | Msa0204210:intron | 40.0% |
| TTCAGGAATAAGGATTGCCA+AGG | - | chr2_1:29122909-29122928 | Msa0204210:intron | 40.0% | |
| TTGCCAAGGAGATGTAACAA+AGG | - | chr2_1:29122923-29122942 | Msa0204210:CDS | 40.0% | |
| ACACCTTTGTTACATCTCCT+TGG | + | chr2_1:29122929-29122948 | None:intergenic | 40.0% | |
| AAGGAGATGTAACAAAGGTG+TGG | - | chr2_1:29122928-29122947 | Msa0204210:CDS | 40.0% | |
| GTCAAAACGTGCTTCTTTGT+AGG | - | chr2_1:29122950-29122969 | Msa0204210:CDS | 40.0% | |
| AAAACGTGCTTCTTTGTAGG+AGG | - | chr2_1:29122953-29122972 | Msa0204210:CDS | 40.0% | |
| ATTTCTACAACAGACAAGCG+AGG | + | chr2_1:29123098-29123117 | None:intergenic | 40.0% | |
| AGTAACCTCTCTAACGATTG+TGG | + | chr2_1:29123148-29123167 | None:intergenic | 40.0% | |
| AATTGCGCCATAAAACAGCT+AGG | - | chr2_1:29123317-29123336 | Msa0204210:CDS | 40.0% | |
| GCTTCGACCAATTCAATCAA+CGG | - | chr2_1:29123345-29123364 | Msa0204210:CDS | 40.0% | |
| ACGATGTCCGATTATAGACT+CGG | - | chr2_1:29123445-29123464 | Msa0204210:intron | 40.0% | |
| CAATCTCCGTATAGGATTTG+CGG | - | chr2_1:29121800-29121819 | Msa0204210:intron | 40.0% | |
| TGCGGAATCTACATAGTCAT+TGG | - | chr2_1:29123639-29123658 | Msa0204210:intron | 40.0% | |
| AGATGATGTTTACGGGTTTG+AGG | - | chr2_1:29123703-29123722 | Msa0204210:five_prime_UTR | 40.0% | |
| GATGATGTTTACGGGTTTGA+GGG | - | chr2_1:29123704-29123723 | Msa0204210:five_prime_UTR | 40.0% | |
| TCATCATACGGGATTTCGCA+CGG | + | chr2_1:29118312-29118331 | None:intergenic | 45.0% | |
| TGCGAAATCCCGTATGATGA+AGG | - | chr2_1:29118312-29118331 | Msa0204210:intron | 45.0% | |
| CGATACTACACTGACACATG+TGG | - | chr2_1:29118773-29118792 | Msa0204210:intron | 45.0% | |
| ! | TGGACAAAGTTTTCTCCCTG+TGG | - | chr2_1:29119020-29119039 | Msa0204210:intron | 45.0% |
| AAGGATCCAATGGCAGAAGT+AGG | - | chr2_1:29119049-29119068 | Msa0204210:intron | 45.0% | |
| AGGATCCAATGGCAGAAGTA+GGG | - | chr2_1:29119050-29119069 | Msa0204210:intron | 45.0% | |
| !! | TGAGATTGTCTTTGGTGGTG+TGG | - | chr2_1:29119075-29119094 | Msa0204210:intron | 45.0% |
| !!! | GTGGACAAGAGGCATTTTAG+AGG | - | chr2_1:29119094-29119113 | Msa0204210:intron | 45.0% |
| TTCTCAAGAGGGTTATTGGC+AGG | - | chr2_1:29119138-29119157 | Msa0204210:intron | 45.0% | |
| GTATCTGCAGATTGAAGTGG+GGG | - | chr2_1:29119231-29119250 | Msa0204210:three_prime_UTR | 45.0% | |
| CACTCATGCTATTCACTCAC+AGG | + | chr2_1:29119359-29119378 | None:intergenic | 45.0% | |
| ACTCGAGGAAACATGATAGC+GGG | + | chr2_1:29119712-29119731 | None:intergenic | 45.0% | |
| GACTCGAGGAAACATGATAG+CGG | + | chr2_1:29119713-29119732 | None:intergenic | 45.0% | |
| GCTTCAGATGTCAAGTCTAG+AGG | - | chr2_1:29119735-29119754 | Msa0204210:intron | 45.0% | |
| ATGTCAAGTCTAGAGGGTGA+TGG | - | chr2_1:29119742-29119761 | Msa0204210:intron | 45.0% | |
| TGTCAAGTCTAGAGGGTGAT+GGG | - | chr2_1:29119743-29119762 | Msa0204210:intron | 45.0% | |
| TCGGGGACTACTTTAATTGC+CGG | - | chr2_1:29120006-29120025 | Msa0204210:intron | 45.0% | |
| AACCATGCCATTGGAACAGA+AGG | - | chr2_1:29120132-29120151 | Msa0204210:intron | 45.0% | |
| ATCCTTCTGTTCCAATGGCA+TGG | + | chr2_1:29120137-29120156 | None:intergenic | 45.0% | |
| AACAACACCCTCGCACATTT+AGG | - | chr2_1:29121059-29121078 | Msa0204210:intron | 45.0% | |
| ACAACACCCTCGCACATTTA+GGG | - | chr2_1:29121060-29121079 | Msa0204210:intron | 45.0% | |
| TGTTCTCCTGTGTGCTATAG+CGG | - | chr2_1:29121568-29121587 | Msa0204210:intron | 45.0% | |
| ACAAAACCGCTATAGCACAC+AGG | + | chr2_1:29121577-29121596 | None:intergenic | 45.0% | |
| ATATGTACGTGCAGGGTTGT+TGG | - | chr2_1:29121735-29121754 | Msa0204210:intron | 45.0% | |
| GACTATGCCAATCTCCGTAT+AGG | - | chr2_1:29121792-29121811 | Msa0204210:intron | 45.0% | |
| ! | GGTAAGAGTATGTAAGGCTC+AGG | - | chr2_1:29121929-29121948 | Msa0204210:intron | 45.0% |
| ATCAATTGAAGCGGACGCTA+CGG | - | chr2_1:29122799-29122818 | Msa0204210:CDS | 45.0% | |
| TACAACTTGATCCCATCCCT+TGG | + | chr2_1:29122836-29122855 | None:intergenic | 45.0% | |
| !! | GACTCTAAAGCATCGCATTC+AGG | - | chr2_1:29122892-29122911 | Msa0204210:intron | 45.0% |
| TTGAAAACCTCTGATGAGCC+AGG | - | chr2_1:29123055-29123074 | Msa0204210:intron | 45.0% | |
| ATGCACCACAATCGTTAGAG+AGG | - | chr2_1:29123140-29123159 | Msa0204210:CDS | 45.0% | |
| CGTTAGAGAGGTTACTGAGA+TGG | - | chr2_1:29123152-29123171 | Msa0204210:CDS | 45.0% | |
| GATTGAATTGGTCGAAGCTG+TGG | + | chr2_1:29123343-29123362 | None:intergenic | 45.0% | |
| ATATCTACGTGCAGGGTTGT+TGG | - | chr2_1:29123556-29123575 | Msa0204210:intron | 45.0% | |
| CGCAAATCCTATACGGAGAT+TGG | + | chr2_1:29123623-29123642 | None:intergenic | 45.0% | |
| !! | TATTTATATTATATTATGAA+AGG | - | chr2_1:29117411-29117430 | Msa0204210:intron | 5.0% |
| TTGGGAAAGTCACACCAGTG+TGG | - | chr2_1:29118591-29118610 | Msa0204210:intron | 50.0% | |
| CACTGACACGTGTAAGAGAC+TGG | + | chr2_1:29118745-29118764 | None:intergenic | 50.0% | |
| GGATCCAATGGCAGAAGTAG+GGG | - | chr2_1:29119051-29119070 | Msa0204210:intron | 50.0% | |
| GATCCAATGGCAGAAGTAGG+GGG | - | chr2_1:29119052-29119071 | Msa0204210:intron | 50.0% | |
| GTAGGGGGTGAGATTGTCTT+TGG | - | chr2_1:29119067-29119086 | Msa0204210:intron | 50.0% | |
| !! | TCTTTGGTGGTGTGGACAAG+AGG | - | chr2_1:29119083-29119102 | Msa0204210:intron | 50.0% |
| !! | TCGAGGAAACATGATAGCGG+GGG | + | chr2_1:29119710-29119729 | None:intergenic | 50.0% |
| ! | CTCGAGGAAACATGATAGCG+GGG | + | chr2_1:29119711-29119730 | None:intergenic | 50.0% |
| ! | GACATCTGAAGCATGACTCG+AGG | + | chr2_1:29119727-29119746 | None:intergenic | 50.0% |
| !! | AAATACGCTGGTGCCGTTGT+TGG | - | chr2_1:29119890-29119909 | Msa0204210:CDS | 50.0% |
| !! | CTGTGCTGCAATAGTGGACT+CGG | - | chr2_1:29119987-29120006 | Msa0204210:intron | 50.0% |
| !! | TGTGCTGCAATAGTGGACTC+GGG | - | chr2_1:29119988-29120007 | Msa0204210:intron | 50.0% |
| GACTATCCACCTACGAAGCA+CGG | - | chr2_1:29120268-29120287 | Msa0204210:intron | 50.0% | |
| TGTTCGTATCCGTGCTTCGT+AGG | + | chr2_1:29120280-29120299 | None:intergenic | 50.0% | |
| ACGAAGCACGGATACGAACA+CGG | - | chr2_1:29120280-29120299 | Msa0204210:intron | 50.0% | |
| TATGTGTCAGTGTCCGACAC+CGG | - | chr2_1:29120359-29120378 | Msa0204210:intron | 50.0% | |
| CTTCGTCCCTAAATGTGCGA+GGG | + | chr2_1:29121069-29121088 | None:intergenic | 50.0% | |
| TCTTCGTCCCTAAATGTGCG+AGG | + | chr2_1:29121070-29121089 | None:intergenic | 50.0% | |
| GTTTCCTCTCTCTCCAGAAC+AGG | - | chr2_1:29121275-29121294 | Msa0204210:intron | 50.0% | |
| !! | CAAACCTGTTCTGGAGAGAG+AGG | + | chr2_1:29121282-29121301 | None:intergenic | 50.0% |
| TCTTGATGTTCCTTCGCCAC+AGG | - | chr2_1:29121600-29121619 | Msa0204210:intron | 50.0% | |
| CTTGATGTTCCTTCGCCACA+GGG | - | chr2_1:29121601-29121620 | Msa0204210:intron | 50.0% | |
| TTAGCATGTGTGGGAGATGC+AGG | - | chr2_1:29122332-29122351 | Msa0204210:intron | 50.0% | |
| !! | TGCGATGCTTTAGAGTCTCG+TGG | + | chr2_1:29122889-29122908 | None:intergenic | 50.0% |
| AAACCTCTGATGAGCCAGGA+AGG | - | chr2_1:29123059-29123078 | Msa0204210:intron | 50.0% | |
| AACCTCTGATGAGCCAGGAA+GGG | - | chr2_1:29123060-29123079 | Msa0204210:intron | 50.0% | |
| TCTACAACAGACAAGCGAGG+TGG | + | chr2_1:29123095-29123114 | None:intergenic | 50.0% | |
| !! | GCTGTGGCCTAGCTGTTTTA+TGG | + | chr2_1:29123327-29123346 | None:intergenic | 50.0% |
| GACTACGCCAATCTCCGTAT+AGG | - | chr2_1:29123613-29123632 | Msa0204210:intron | 50.0% | |
| ! | CGGGTTTGAGGGAGTATGTA+AGG | - | chr2_1:29123715-29123734 | Msa0204210:five_prime_UTR | 50.0% |
| TCACCCCCTACTTCTGCCAT+TGG | + | chr2_1:29119058-29119077 | None:intergenic | 55.0% | |
| GGGGGTGAGATTGTCTTTGG+TGG | - | chr2_1:29119070-29119089 | Msa0204210:intron | 55.0% | |
| !! | CGAGGAAACATGATAGCGGG+GGG | + | chr2_1:29119709-29119728 | None:intergenic | 55.0% |
| !! | GTGCTGCAATAGTGGACTCG+GGG | - | chr2_1:29119989-29120008 | Msa0204210:intron | 55.0% |
| TCGTATCCGTGCTTCGTAGG+TGG | + | chr2_1:29120277-29120296 | None:intergenic | 55.0% | |
| ATGTGTCAGTGTCCGACACC+GGG | - | chr2_1:29120360-29120379 | Msa0204210:intron | 55.0% | |
| AATTAGGCGTGTCCCGGTGT+CGG | + | chr2_1:29120375-29120394 | None:intergenic | 55.0% | |
| TCCTCGAATTAGGCGTGTCC+CGG | + | chr2_1:29120381-29120400 | None:intergenic | 55.0% | |
| GCACGGACACTCCTCGAATT+AGG | + | chr2_1:29120391-29120410 | None:intergenic | 55.0% | |
| TATTACCAGAGGGGACCCTG+TGG | + | chr2_1:29121619-29121638 | None:intergenic | 55.0% | |
| AATTGAAGCGGACGCTACGG+TGG | - | chr2_1:29122802-29122821 | Msa0204210:CDS | 55.0% | |
| ATTGAAGCGGACGCTACGGT+GGG | - | chr2_1:29122803-29122822 | Msa0204210:CDS | 55.0% | |
| ACCTCTGATGAGCCAGGAAG+GGG | - | chr2_1:29123061-29123080 | Msa0204210:intron | 55.0% | |
| ! | GCGGGGGGCCTAACGTATTT+TGG | + | chr2_1:29119694-29119713 | None:intergenic | 60.0% |
| GGGTGGCTGTGCTGCAATAG+TGG | - | chr2_1:29119981-29120000 | Msa0204210:intron | 60.0% | |
| ACCGGGACACGCCTAATTCG+AGG | - | chr2_1:29120377-29120396 | Msa0204210:CDS | 60.0% | |
| GAGAGGCTCCCGAATCCAGT+TGG | - | chr2_1:29121183-29121202 | Msa0204210:intron | 60.0% | |
| TTGAAGCGGACGCTACGGTG+GGG | - | chr2_1:29122804-29122823 | Msa0204210:CDS | 60.0% | |
| TACGGTGGGGTTGACGCCAA+GGG | - | chr2_1:29122817-29122836 | Msa0204210:CDS | 60.0% | |
| TGGGGTTGACGCCAAGGGAT+GGG | - | chr2_1:29122822-29122841 | Msa0204210:intron | 60.0% | |
| CCTCTGATGAGCCAGGAAGG+GGG | - | chr2_1:29123062-29123081 | Msa0204210:intron | 60.0% | |
| ATGAGCCAGGAAGGGGGTTC+AGG | - | chr2_1:29123068-29123087 | Msa0204210:intron | 60.0% | |
| CTACGGTGGGGTTGACGCCA+AGG | - | chr2_1:29122816-29122835 | Msa0204210:CDS | 65.0% | |
| GTGGGGTTGACGCCAAGGGA+TGG | - | chr2_1:29122821-29122840 | Msa0204210:CDS | 65.0% | |
| CCCCCTTCCTGGCTCATCAG+AGG | + | chr2_1:29123065-29123084 | None:intergenic | 65.0% | |
| GTGGTCCTGAACCCCCTTCC+TGG | + | chr2_1:29123076-29123095 | None:intergenic | 65.0% | |
| CAGAGGGGACCCTGTGGCGA+AGG | + | chr2_1:29121613-29121632 | None:intergenic | 70.0% | |
| CTTCGCCACAGGGTCCCCTC+TGG | - | chr2_1:29121611-29121630 | Msa0204210:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 29117320 | 29123824 | 29117320 | ID=Msa0204210;Name=Msa0204210 |
| chr2_1 | mRNA | 29117320 | 29123824 | 29117320 | ID=Msa0204210-mRNA-1;Parent=Msa0204210;Name=Msa0204210-mRNA-1;_AED=0.27;_eAED=0.27;_QI=164|1|1|1|0.8|0.75|16|199|507 |
| chr2_1 | exon | 29117320 | 29117412 | 29117320 | ID=Msa0204210-mRNA-1:exon:10479;Parent=Msa0204210-mRNA-1 |
| chr2_1 | exon | 29119205 | 29119395 | 29119205 | ID=Msa0204210-mRNA-1:exon:10478;Parent=Msa0204210-mRNA-1 |
| chr2_1 | exon | 29119512 | 29119609 | 29119512 | ID=Msa0204210-mRNA-1:exon:10477;Parent=Msa0204210-mRNA-1 |
| chr2_1 | exon | 29119848 | 29119967 | 29119848 | ID=Msa0204210-mRNA-1:exon:10476;Parent=Msa0204210-mRNA-1 |
| chr2_1 | exon | 29120365 | 29120521 | 29120365 | ID=Msa0204210-mRNA-1:exon:10475;Parent=Msa0204210-mRNA-1 |
| chr2_1 | exon | 29120611 | 29120675 | 29120611 | ID=Msa0204210-mRNA-1:exon:10474;Parent=Msa0204210-mRNA-1 |
| chr2_1 | exon | 29120917 | 29121030 | 29120917 | ID=Msa0204210-mRNA-1:exon:10473;Parent=Msa0204210-mRNA-1 |
| chr2_1 | exon | 29121109 | 29121173 | 29121109 | ID=Msa0204210-mRNA-1:exon:10472;Parent=Msa0204210-mRNA-1 |
| chr2_1 | exon | 29121864 | 29121903 | 29121864 | ID=Msa0204210-mRNA-1:exon:10471;Parent=Msa0204210-mRNA-1 |
| chr2_1 | exon | 29121985 | 29122153 | 29121985 | ID=Msa0204210-mRNA-1:exon:10470;Parent=Msa0204210-mRNA-1 |
| chr2_1 | exon | 29122532 | 29122644 | 29122532 | ID=Msa0204210-mRNA-1:exon:10469;Parent=Msa0204210-mRNA-1 |
| chr2_1 | exon | 29122746 | 29122840 | 29122746 | ID=Msa0204210-mRNA-1:exon:10468;Parent=Msa0204210-mRNA-1 |
| chr2_1 | exon | 29122920 | 29122980 | 29122920 | ID=Msa0204210-mRNA-1:exon:10467;Parent=Msa0204210-mRNA-1 |
| chr2_1 | exon | 29123097 | 29123438 | 29123097 | ID=Msa0204210-mRNA-1:exon:10466;Parent=Msa0204210-mRNA-1 |
| chr2_1 | exon | 29123640 | 29123676 | 29123640 | ID=Msa0204210-mRNA-1:exon:10465;Parent=Msa0204210-mRNA-1 |
| chr2_1 | exon | 29123698 | 29123824 | 29123698 | ID=Msa0204210-mRNA-1:exon:10464;Parent=Msa0204210-mRNA-1 |
| chr2_1 | five_prime_UTR | 29123698 | 29123824 | 29123698 | ID=Msa0204210-mRNA-1:five_prime_utr;Parent=Msa0204210-mRNA-1 |
| chr2_1 | five_prime_UTR | 29123640 | 29123676 | 29123640 | ID=Msa0204210-mRNA-1:five_prime_utr;Parent=Msa0204210-mRNA-1 |
| chr2_1 | CDS | 29123097 | 29123438 | 29123097 | ID=Msa0204210-mRNA-1:cds;Parent=Msa0204210-mRNA-1 |
| chr2_1 | CDS | 29122920 | 29122980 | 29122920 | ID=Msa0204210-mRNA-1:cds;Parent=Msa0204210-mRNA-1 |
| chr2_1 | CDS | 29122746 | 29122840 | 29122746 | ID=Msa0204210-mRNA-1:cds;Parent=Msa0204210-mRNA-1 |
| chr2_1 | CDS | 29122532 | 29122644 | 29122532 | ID=Msa0204210-mRNA-1:cds;Parent=Msa0204210-mRNA-1 |
| chr2_1 | CDS | 29121985 | 29122153 | 29121985 | ID=Msa0204210-mRNA-1:cds;Parent=Msa0204210-mRNA-1 |
| chr2_1 | CDS | 29121864 | 29121903 | 29121864 | ID=Msa0204210-mRNA-1:cds;Parent=Msa0204210-mRNA-1 |
| chr2_1 | CDS | 29121109 | 29121173 | 29121109 | ID=Msa0204210-mRNA-1:cds;Parent=Msa0204210-mRNA-1 |
| chr2_1 | CDS | 29120917 | 29121030 | 29120917 | ID=Msa0204210-mRNA-1:cds;Parent=Msa0204210-mRNA-1 |
| chr2_1 | CDS | 29120611 | 29120675 | 29120611 | ID=Msa0204210-mRNA-1:cds;Parent=Msa0204210-mRNA-1 |
| chr2_1 | CDS | 29120365 | 29120521 | 29120365 | ID=Msa0204210-mRNA-1:cds;Parent=Msa0204210-mRNA-1 |
| chr2_1 | CDS | 29119848 | 29119967 | 29119848 | ID=Msa0204210-mRNA-1:cds;Parent=Msa0204210-mRNA-1 |
| chr2_1 | CDS | 29119512 | 29119609 | 29119512 | ID=Msa0204210-mRNA-1:cds;Parent=Msa0204210-mRNA-1 |
| chr2_1 | CDS | 29119311 | 29119395 | 29119311 | ID=Msa0204210-mRNA-1:cds;Parent=Msa0204210-mRNA-1 |
| chr2_1 | three_prime_UTR | 29119205 | 29119310 | 29119205 | ID=Msa0204210-mRNA-1:three_prime_utr;Parent=Msa0204210-mRNA-1 |
| chr2_1 | three_prime_UTR | 29117320 | 29117412 | 29117320 | ID=Msa0204210-mRNA-1:three_prime_utr;Parent=Msa0204210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
