Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262400 | XP_013465165.1 | 92.281 | 285 | 3 | 1 | 2 | 267 | 3 | 287 | 0.0 | 516 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262400 | sp|Q9ZNT7|PHB2_ARATH | 75.524 | 286 | 50 | 2 | 1 | 266 | 1 | 286 | 9.82e-148 | 417 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262400 | A0A072VM16 | 92.281 | 285 | 3 | 1 | 2 | 267 | 3 | 287 | 0.0 | 516 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018050 | Msa0262400 | 0.803936 | 2.748273e-49 | -8.615850e-47 |
| Msa0262400 | Msa0337750 | 0.843698 | 1.194284e-58 | -8.615850e-47 |
| Msa0262400 | Msa0553930 | 0.813611 | 2.345435e-51 | -8.615850e-47 |
| Msa0262400 | Msa0554210 | 0.807053 | 6.097986e-50 | -8.615850e-47 |
| Msa0262400 | Msa0648400 | 0.812715 | 3.687497e-51 | -8.615850e-47 |
| Msa0262400 | Msa1211820 | 0.848455 | 6.064685e-60 | -8.615850e-47 |
| Msa0262400 | Msa1299690 | 0.839332 | 1.687859e-57 | -8.615850e-47 |
| Msa0262400 | Msa1332230 | 0.840132 | 1.045194e-57 | -8.615850e-47 |
| Msa0262400 | Msa1433590 | 0.842782 | 2.095431e-58 | -8.615850e-47 |
| Msa0262400 | Msa1433910 | 0.802586 | 5.228468e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262400 | MtrunA17_Chr2g0325011 | 92.254 | 284 | 3 | 1 | 3 | 267 | 1 | 284 | 0.0 | 514 |
| Msa0262400 | MtrunA17_Chr4g0040101 | 78.521 | 284 | 42 | 1 | 3 | 267 | 1 | 284 | 1.13e-158 | 442 |
| Msa0262400 | MtrunA17_Chr8g0356051 | 49.802 | 253 | 105 | 3 | 25 | 255 | 20 | 272 | 7.88e-79 | 239 |
| Msa0262400 | MtrunA17_Chr3g0079011 | 47.500 | 280 | 120 | 5 | 10 | 266 | 3 | 278 | 4.41e-78 | 237 |
| Msa0262400 | MtrunA17_Chr5g0444361 | 29.282 | 181 | 94 | 4 | 3 | 163 | 12 | 178 | 9.66e-19 | 81.3 |
| Msa0262400 | MtrunA17_Chr6g0449171 | 33.333 | 144 | 58 | 1 | 77 | 220 | 2 | 107 | 1.57e-17 | 76.3 |
| Msa0262400 | MtrunA17_Chr5g0444371 | 27.215 | 158 | 75 | 3 | 25 | 163 | 18 | 154 | 1.07e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262400 | AT1G03860.1 | 75.524 | 286 | 50 | 2 | 1 | 266 | 1 | 286 | 9.99e-149 | 417 |
| Msa0262400 | AT1G03860.3 | 75.524 | 286 | 50 | 2 | 1 | 266 | 1 | 286 | 9.99e-149 | 417 |
| Msa0262400 | AT4G28510.1 | 80.000 | 285 | 38 | 1 | 2 | 267 | 3 | 287 | 1.69e-146 | 412 |
| Msa0262400 | AT2G20530.2 | 75.524 | 286 | 50 | 2 | 1 | 267 | 1 | 285 | 3.21e-146 | 411 |
| Msa0262400 | AT2G20530.1 | 75.524 | 286 | 50 | 2 | 1 | 267 | 1 | 285 | 3.21e-146 | 411 |
| Msa0262400 | AT5G44140.1 | 72.662 | 278 | 56 | 2 | 1 | 258 | 1 | 278 | 7.70e-141 | 397 |
| Msa0262400 | AT1G03860.2 | 79.638 | 221 | 26 | 1 | 65 | 266 | 1 | 221 | 1.25e-115 | 331 |
| Msa0262400 | AT3G27280.1 | 47.794 | 272 | 118 | 3 | 15 | 266 | 12 | 279 | 4.82e-79 | 240 |
| Msa0262400 | AT3G27280.2 | 47.794 | 272 | 118 | 3 | 15 | 266 | 12 | 279 | 4.82e-79 | 240 |
| Msa0262400 | AT5G40770.1 | 49.042 | 261 | 113 | 2 | 15 | 255 | 12 | 272 | 1.74e-78 | 239 |
| Msa0262400 | AT5G14300.1 | 46.256 | 227 | 108 | 5 | 33 | 255 | 22 | 238 | 9.44e-61 | 192 |
Find 103 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGACGGCCTTGTTAATT+TGG | 0.098580 | 2_2:-61343303 | Msa0262400:three_prime_UTR |
| CACACTTTACAGGTGAAAAT+TGG | 0.119569 | 2_2:-61344920 | Msa0262400:intron |
| TGCATCAACACTGGCGAAAT+TGG | 0.141061 | 2_2:-61346881 | Msa0262400:CDS |
| AAGAATGAAATGCAGTTAAA+AGG | 0.207619 | 2_2:+61347187 | None:intergenic |
| AACCGTACGGTTCGGGAATT+GGG | 0.234943 | 2_2:+61347263 | None:intergenic |
| CTGGCGAAATTGGGAATTAT+TGG | 0.260992 | 2_2:-61346871 | Msa0262400:CDS |
| AAACCGTACGGTTCGGGAAT+TGG | 0.269799 | 2_2:+61347262 | None:intergenic |
| TGCAACTTGGATCATTCGTT+TGG | 0.285467 | 2_2:+61343261 | None:intergenic |
| TTGGGAATTATTGGTGGAAT+TGG | 0.287106 | 2_2:-61346862 | Msa0262400:CDS |
| CATGACGGCCTTGTTAATTT+GGG | 0.289043 | 2_2:-61343302 | Msa0262400:three_prime_UTR |
| AAATCCAACGAACTTATTTC+AGG | 0.300261 | 2_2:+61343185 | None:intergenic |
| ACAAGAAAACCGTACGGTTC+GGG | 0.362606 | 2_2:+61347256 | None:intergenic |
| GCAAAAGATCACCTGCTTCC+AGG | 0.365181 | 2_2:+61343486 | None:intergenic |
| ATCACAAAATGTGTTCCTTC+AGG | 0.369702 | 2_2:+61346646 | None:intergenic |
| GTCCTTACTCGTCCTTTGCC+TGG | 0.375759 | 2_2:-61344890 | Msa0262400:CDS |
| TTCTTGTGCAGCCACCTGCT+TGG | 0.376184 | 2_2:+61344253 | None:intergenic |
| CCCTCTCAGTCAGAATCTTC+CGG | 0.382058 | 2_2:+61344357 | None:intergenic |
| AGAATGAAATGCAGTTAAAA+GGG | 0.385989 | 2_2:+61347188 | None:intergenic |
| CTACCTCCAGTTATTGAATC+TGG | 0.394577 | 2_2:-61343229 | Msa0262400:three_prime_UTR |
| TCAGGCAGCAAAATTAAATC+AGG | 0.394657 | 2_2:+61343203 | None:intergenic |
| AAAGTTTCATGTATGATTGA+AGG | 0.395524 | 2_2:+61344812 | None:intergenic |
| TAAGTTGGCTGGCATTGTAC+TGG | 0.400052 | 2_2:+61344774 | None:intergenic |
| CTCCTTCATCGCAATCTTCA+AGG | 0.400536 | 2_2:-61347158 | Msa0262400:intron |
| AGGATGCCAGATTCAATAAC+TGG | 0.402800 | 2_2:+61343223 | None:intergenic |
| GCCAGCTACCTACAGTTTAT+CGG | 0.406328 | 2_2:-61344868 | Msa0262400:CDS |
| TACCTTGAAGATTGCGATGA+AGG | 0.416687 | 2_2:+61347156 | None:intergenic |
| AACAAGAAAACCGTACGGTT+CGG | 0.419480 | 2_2:+61347255 | None:intergenic |
| GTATAAAACTATCGATTTGA+AGG | 0.420920 | 2_2:-61343385 | Msa0262400:three_prime_UTR |
| CAATGGCTTGTCCGATCAGT+TGG | 0.421036 | 2_2:+61343597 | None:intergenic |
| TGGAGAGAATTATAATGAAC+GGG | 0.425726 | 2_2:-61344840 | Msa0262400:CDS |
| GCAACTTGGATCATTCGTTT+GGG | 0.426029 | 2_2:+61343262 | None:intergenic |
| ACACTTTACAGGTGAAAATT+GGG | 0.431100 | 2_2:-61344919 | Msa0262400:intron |
| GCATCAACACTGGCGAAATT+GGG | 0.431369 | 2_2:-61346880 | Msa0262400:CDS |
| AACAGTCTTTACAATGTTGA+AGG | 0.452541 | 2_2:-61346823 | Msa0262400:CDS |
| ATGACGGCCTTGTTAATTTG+GGG | 0.466313 | 2_2:-61343301 | Msa0262400:three_prime_UTR |
| TTCCTCAGTGTGATGAAAGC+TGG | 0.472587 | 2_2:+61343566 | None:intergenic |
| TTCATGAATTCTGACCTAGT+TGG | 0.477640 | 2_2:-61343341 | Msa0262400:three_prime_UTR |
| TCAATTACTAGTCTGACCTT+TGG | 0.487774 | 2_2:-61344302 | Msa0262400:CDS |
| TTCAGCAAACAAGGTTTACC+TGG | 0.493035 | 2_2:-61343504 | Msa0262400:CDS |
| TGCTGCAATTGAAGCCAAGC+AGG | 0.493081 | 2_2:-61344267 | Msa0262400:CDS |
| GAATCTTCAGCGGATCAACT+TGG | 0.494004 | 2_2:-61343462 | Msa0262400:CDS |
| CCAAATTAACAAGGCCGTCA+TGG | 0.495219 | 2_2:+61343303 | None:intergenic |
| AAGTGCTGTAATTAGAGCAC+AGG | 0.500292 | 2_2:-61344183 | Msa0262400:intron |
| GCGAAATTGGGAATTATTGG+TGG | 0.507313 | 2_2:-61346868 | Msa0262400:CDS |
| ATCAAGAGCAATGTTGAAGT+TGG | 0.509611 | 2_2:+61344331 | None:intergenic |
| CCTACGAAGATTCAGTCAAA+AGG | 0.509827 | 2_2:-61347313 | None:intergenic |
| TCCCCAATTCCCGAACCGTA+CGG | 0.511134 | 2_2:-61347265 | Msa0262400:five_prime_UTR |
| TGTGATGAAAGCTGGATTGT+TGG | 0.511259 | 2_2:+61343574 | None:intergenic |
| GCTGCCTGAAATAAGTTCGT+TGG | 0.513237 | 2_2:-61343189 | Msa0262400:three_prime_UTR |
| GTTGATGCAGCGCCACCACT+TGG | 0.517803 | 2_2:+61346895 | None:intergenic |
| CCTACAGTTTATCGGACCCT+TGG | 0.517966 | 2_2:-61344860 | Msa0262400:CDS |
| AGGCTGTTAGTCGTGAAATC+CGG | 0.519390 | 2_2:-61344376 | Msa0262400:CDS |
| AATGGCTTGTCCGATCAGTT+GGG | 0.519729 | 2_2:+61343598 | None:intergenic |
| GTTCATTATAATTCTCTCCA+AGG | 0.524825 | 2_2:+61344843 | None:intergenic |
| GGCCAGGCAAAGGACGAGTA+AGG | 0.525565 | 2_2:+61344888 | None:intergenic |
| ATCGTGTTTAACCGTCTCGT+TGG | 0.527718 | 2_2:-61346787 | Msa0262400:CDS |
| GTTGTGTAGGTTTATCCTGA+AGG | 0.531470 | 2_2:-61346661 | Msa0262400:intron |
| TGACGGCCTTGTTAATTTGG+GGG | 0.535142 | 2_2:-61343300 | Msa0262400:three_prime_UTR |
| TATTGCAAATTCAGCAAACA+AGG | 0.537639 | 2_2:-61343513 | Msa0262400:CDS |
| AACAAGGTTTACCTGGAAGC+AGG | 0.540987 | 2_2:-61343497 | Msa0262400:CDS |
| CCTCCCGCTGTGTAATAAGT+TGG | 0.543103 | 2_2:+61344759 | None:intergenic |
| TCCGATAAACTGTAGGTAGC+TGG | 0.544929 | 2_2:+61344867 | None:intergenic |
| TTGTGATTCCGTGGTTTGAG+AGG | 0.547203 | 2_2:-61346630 | Msa0262400:CDS |
| TTGGAGAGAATTATAATGAA+CGG | 0.549347 | 2_2:-61344841 | Msa0262400:CDS |
| CCGCTGTGTAATAAGTTGGC+TGG | 0.549719 | 2_2:+61344763 | None:intergenic |
| GTAGGTAGCTGGCCAGGCAA+AGG | 0.551902 | 2_2:+61344878 | None:intergenic |
| ATCACCGGCCTCTCAAACCA+CGG | 0.552231 | 2_2:+61346622 | None:intergenic |
| AAGTTGGCTGGCATTGTACT+GGG | 0.555741 | 2_2:+61344775 | None:intergenic |
| TTCATTATAATTCTCTCCAA+GGG | 0.556280 | 2_2:+61344844 | None:intergenic |
| TACTAGTCTGACCTTTGGCA+AGG | 0.569845 | 2_2:-61344297 | Msa0262400:CDS |
| GATTCCGTGGTTTGAGAGGC+CGG | 0.570682 | 2_2:-61346626 | Msa0262400:CDS |
| CAGCCAACTTATTACACAGC+GGG | 0.571868 | 2_2:-61344762 | Msa0262400:CDS |
| GGCTGCACAAGAAGCTGAGA+GGG | 0.572538 | 2_2:-61344243 | Msa0262400:CDS |
| TGGTGGCGCTGCATCAACAC+TGG | 0.572841 | 2_2:-61346890 | Msa0262400:CDS |
| GCTAAAAGTGCCCAACTGAT+CGG | 0.574265 | 2_2:-61343608 | Msa0262400:CDS |
| TAAACTGTAGGTAGCTGGCC+AGG | 0.578326 | 2_2:+61344872 | None:intergenic |
| GTTGTCTGTTCATTCCAACT+AGG | 0.578695 | 2_2:+61343327 | None:intergenic |
| TGAGAGGGCTAAATTTGTTG+TGG | 0.593905 | 2_2:-61344228 | Msa0262400:CDS |
| ACCGTACGGTTCGGGAATTG+GGG | 0.596022 | 2_2:+61347264 | None:intergenic |
| CCAAGGGTCCGATAAACTGT+AGG | 0.602094 | 2_2:+61344860 | None:intergenic |
| AACGCGAAAGTTCCAAGTGG+TGG | 0.602185 | 2_2:-61346907 | Msa0262400:CDS |
| TTCTGAACAAGAAAACCGTA+CGG | 0.603333 | 2_2:+61347250 | None:intergenic |
| GAGGAAGATAGAAGCCGCGA+GGG | 0.603991 | 2_2:-61343549 | Msa0262400:CDS |
| CCGGAAGATTCTGACTGAGA+GGG | 0.615174 | 2_2:-61344357 | Msa0262400:CDS |
| TCCGGAAGATTCTGACTGAG+AGG | 0.615920 | 2_2:-61344358 | Msa0262400:CDS |
| TGTCTTTGACACCAACGAGA+CGG | 0.624230 | 2_2:+61346776 | None:intergenic |
| TGCAATTGAAGCCAAGCAGG+TGG | 0.632190 | 2_2:-61344264 | Msa0262400:CDS |
| GAAAGCTGGATTGTTGGCAA+TGG | 0.633552 | 2_2:+61343580 | None:intergenic |
| ACATGAAACTTTGAAAGCTG+TGG | 0.633777 | 2_2:-61344801 | Msa0262400:CDS |
| TGGCTGCACAAGAAGCTGAG+AGG | 0.639141 | 2_2:-61344244 | Msa0262400:CDS |
| GCACGAACATCATAGATCAC+CGG | 0.645792 | 2_2:+61346607 | None:intergenic |
| GACGGTTAAACACGATAGCA+CGG | 0.646783 | 2_2:+61346794 | None:intergenic |
| AGTCTTTACAATGTTGAAGG+AGG | 0.648302 | 2_2:-61346820 | Msa0262400:CDS |
| AGCAGTAAACTCCTTGCCAA+AGG | 0.656274 | 2_2:+61344286 | None:intergenic |
| ATGAACAGACAACTCCATGA+CGG | 0.673190 | 2_2:-61343317 | Msa0262400:three_prime_UTR |
| TCTCGTTGGTGTCAAAGACA+AGG | 0.674892 | 2_2:-61346773 | Msa0262400:intron |
| CCAACTTATTACACAGCGGG+AGG | 0.682391 | 2_2:-61344759 | Msa0262400:intron |
| ATGCCAGATTCAATAACTGG+AGG | 0.687656 | 2_2:+61343226 | None:intergenic |
| TGAGGAAGATAGAAGCCGCG+AGG | 0.696862 | 2_2:-61343550 | Msa0262400:CDS |
| AACATGTGCTATCTCCCTCG+CGG | 0.711001 | 2_2:+61343535 | None:intergenic |
| AAGAACGCGAAAGTTCCAAG+TGG | 0.742151 | 2_2:-61346910 | Msa0262400:CDS |
| ATCCAGCTTTCATCACACTG+AGG | 0.780168 | 2_2:-61343568 | Msa0262400:CDS |
| CCAGCCAACTTATTACACAG+CGG | 0.790079 | 2_2:-61344763 | Msa0262400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTTTTTTTTTTTTGAATA+GGG | + | chr2_2:61343173-61343192 | None:intergenic | 10.0% |
| !!! | AGATTTTTTTTTTTTTGAAT+AGG | + | chr2_2:61343174-61343193 | None:intergenic | 10.0% |
| !! | TAAACATTTCTAAATTTAAA+GGG | + | chr2_2:61344615-61344634 | None:intergenic | 10.0% |
| !! | ATAAACATTTCTAAATTTAA+AGG | + | chr2_2:61344616-61344635 | None:intergenic | 10.0% |
| !!! | AGTTTTAATTAATAATTCAT+AGG | - | chr2_2:61345331-61345350 | Msa0262400:intron | 10.0% |
| !!! | AAAATGAAAATTGATTTCTA+AGG | + | chr2_2:61343297-61343316 | None:intergenic | 15.0% |
| !!! | TTTATTTTATCTTTAGCTAT+AGG | + | chr2_2:61343950-61343969 | None:intergenic | 15.0% |
| !!! | CGTTTTTACAAAATTTATAT+TGG | - | chr2_2:61344487-61344506 | Msa0262400:intron | 15.0% |
| !! | ATATAAGCTATTTATAAAAC+TGG | + | chr2_2:61344540-61344559 | None:intergenic | 15.0% |
| !! | GAATATGATATATCAAAAAT+GGG | + | chr2_2:61344726-61344745 | None:intergenic | 15.0% |
| !! | TGAATATGATATATCAAAAA+TGG | + | chr2_2:61344727-61344746 | None:intergenic | 15.0% |
| !! | TTTGATATATCATATTCAAA+TGG | - | chr2_2:61344729-61344748 | Msa0262400:intron | 15.0% |
| !! | GTTAAATGTTTCTTATAAAT+AGG | + | chr2_2:61344912-61344931 | None:intergenic | 15.0% |
| !!! | ATTATGTCTTCTAATATTTT+TGG | - | chr2_2:61345294-61345313 | Msa0262400:intron | 15.0% |
| !!! | TTCATTTTCGTTTTTGTTTA+GGG | - | chr2_2:61343348-61343367 | Msa0262400:three_prime_UTR | 20.0% |
| !!! | TTTTGTGAATTGAAATGATA+TGG | - | chr2_2:61343694-61343713 | Msa0262400:intron | 20.0% |
| !! | TTTGTGAATTGAAATGATAT+GGG | - | chr2_2:61343695-61343714 | Msa0262400:intron | 20.0% |
| !! | AAACATAATGAAACATATAG+AGG | + | chr2_2:61344352-61344371 | None:intergenic | 20.0% |
| !! | ATTCATGAAAATTATATCAC+TGG | + | chr2_2:61344377-61344396 | None:intergenic | 20.0% |
| !!! | AACTGTATTCAGATTTTAAA+AGG | - | chr2_2:61344412-61344431 | Msa0262400:intron | 20.0% |
| !! | GAGAAAAATCTAAATACTAA+CGG | + | chr2_2:61344805-61344824 | None:intergenic | 20.0% |
| !! | ATGTTTCTTATAAATAGGAA+AGG | + | chr2_2:61344907-61344926 | None:intergenic | 20.0% |
| !!! | TGATTTGAAATAGTTCTTAA+GGG | + | chr2_2:61345061-61345080 | None:intergenic | 20.0% |
| !! | AAATAATCTAACATAATGAC+AGG | + | chr2_2:61345741-61345760 | None:intergenic | 20.0% |
| !! | ATTTACACATAATACTTTCA+AGG | + | chr2_2:61345815-61345834 | None:intergenic | 20.0% |
| !! | ACATCCTACAATTTATTTAT+TGG | - | chr2_2:61345878-61345897 | Msa0262400:intron | 20.0% |
| !! | CAAACCAATAAATAAATTGT+AGG | + | chr2_2:61345885-61345904 | None:intergenic | 20.0% |
| !! | TTAATAGATCTATTCTTTGT+AGG | - | chr2_2:61345993-61346012 | Msa0262400:intron | 20.0% |
| !!! | ATTTTCATGTAGAATACATT+CGG | - | chr2_2:61346298-61346317 | Msa0262400:intron | 20.0% |
| !!! | TGGATTTTTATATTTTTCTC+AGG | - | chr2_2:61347220-61347239 | Msa0262400:five_prime_UTR | 20.0% |
| !!! | GGATTTTTATATTTTTCTCA+GGG | - | chr2_2:61347221-61347240 | Msa0262400:five_prime_UTR | 20.0% |
| !!! | TGCTAAAAGTTTTTGTTTAT+CGG | - | chr2_2:61347279-61347298 | Msa0262400:five_prime_UTR | 20.0% |
| ! | AGAATGAAATGCAGTTAAAA+GGG | + | chr2_2:61343204-61343223 | None:intergenic | 25.0% |
| ! | AAGAATGAAATGCAGTTAAA+AGG | + | chr2_2:61343205-61343224 | None:intergenic | 25.0% |
| !! | AGAAAATTGAAGTAATGGAA+AGG | + | chr2_2:61343266-61343285 | None:intergenic | 25.0% |
| !!! | TGAAAATTGATTTCTAAGGT+GGG | + | chr2_2:61343293-61343312 | None:intergenic | 25.0% |
| !! | ATGAAAATTGATTTCTAAGG+TGG | + | chr2_2:61343294-61343313 | None:intergenic | 25.0% |
| !!! | GTTCATTTTCGTTTTTGTTT+AGG | - | chr2_2:61343347-61343366 | Msa0262400:three_prime_UTR | 25.0% |
| !!! | AAAGACAAGGTCATTTTTTA+GGG | - | chr2_2:61343629-61343648 | Msa0262400:intron | 25.0% |
| ! | CTTGATTTCGTTGAATTTAT+CGG | - | chr2_2:61343671-61343690 | Msa0262400:intron | 25.0% |
| ! | CTTATGTATAAGTTTGCATA+AGG | - | chr2_2:61343920-61343939 | Msa0262400:intron | 25.0% |
| !! | TTATTTTCATAAGTTCTCCA+AGG | + | chr2_2:61344017-61344036 | None:intergenic | 25.0% |
| ! | TGAAAAAAGCTTATGCAAAA+TGG | - | chr2_2:61344039-61344058 | Msa0262400:intron | 25.0% |
| ! | TCTAAATAAAACTGGATTTC+AGG | + | chr2_2:61344153-61344172 | None:intergenic | 25.0% |
| !! | ATACATAATGATTTTCAGAC+AGG | + | chr2_2:61344265-61344284 | None:intergenic | 25.0% |
| ! | TATCATATTCAAATGGTGTA+AGG | - | chr2_2:61344736-61344755 | Msa0262400:intron | 25.0% |
| ! | TTCTTATAAATAGGAAAGGA+GGG | + | chr2_2:61344903-61344922 | None:intergenic | 25.0% |
| ! | TTTCTTATAAATAGGAAAGG+AGG | + | chr2_2:61344904-61344923 | None:intergenic | 25.0% |
| ! | CATTGCATAAATGATGTATT+TGG | - | chr2_2:61344942-61344961 | Msa0262400:intron | 25.0% |
| !! | GATTTGAAATAGTTCTTAAG+GGG | + | chr2_2:61345060-61345079 | None:intergenic | 25.0% |
| !! | CTGATTTGAAATAGTTCTTA+AGG | + | chr2_2:61345062-61345081 | None:intergenic | 25.0% |
| !!! | ATATTTTTGGATGTCAATGT+TGG | - | chr2_2:61345307-61345326 | Msa0262400:intron | 25.0% |
| ! | AATCTATAAACTTGAAGTAC+TGG | + | chr2_2:61345390-61345409 | None:intergenic | 25.0% |
| ! | TTCATTATAATTCTCTCCAA+GGG | + | chr2_2:61345548-61345567 | None:intergenic | 25.0% |
| ! | TTGGAGAGAATTATAATGAA+CGG | - | chr2_2:61345548-61345567 | Msa0262400:intron | 25.0% |
| ! | AAAGTTTCATGTATGATTGA+AGG | + | chr2_2:61345580-61345599 | None:intergenic | 25.0% |
| ! | TTCATAAAACATATGCTACT+GGG | + | chr2_2:61345849-61345868 | None:intergenic | 25.0% |
| ! | TTTCATAAAACATATGCTAC+TGG | + | chr2_2:61345850-61345869 | None:intergenic | 25.0% |
| !! | TGGTTTGAATTCATTTTAAG+TGG | - | chr2_2:61345898-61345917 | Msa0262400:intron | 25.0% |
| !!! | GGTTTGAATTCATTTTAAGT+GGG | - | chr2_2:61345899-61345918 | Msa0262400:intron | 25.0% |
| !!! | TCTTTTGATTCCTTAAACAA+TGG | + | chr2_2:61346502-61346521 | None:intergenic | 25.0% |
| ! | TTTCTTAAACAATGACCTTA+GGG | - | chr2_2:61346600-61346619 | Msa0262400:intron | 25.0% |
| ! | TATTGATCAACATTGAATGT+TGG | - | chr2_2:61346694-61346713 | Msa0262400:intron | 25.0% |
| !!! | GTATAAAACTATCGATTTGA+AGG | - | chr2_2:61347004-61347023 | Msa0262400:intron | 25.0% |
| ! | AAGCTAGTGAGGATTTTATT+GGG | + | chr2_2:61343102-61343121 | None:intergenic | 30.0% |
| ! | AAAGCTAGTGAGGATTTTAT+TGG | + | chr2_2:61343103-61343122 | None:intergenic | 30.0% |
| GAGAGAGAAAATTGAAGTAA+TGG | + | chr2_2:61343271-61343290 | None:intergenic | 30.0% | |
| AACAGTCTTTACAATGTTGA+AGG | - | chr2_2:61343566-61343585 | Msa0262400:CDS | 30.0% | |
| !!! | CAAAGACAAGGTCATTTTTT+AGG | - | chr2_2:61343628-61343647 | Msa0262400:intron | 30.0% |
| !!! | AAGGTCATTTTTTAGGGTTT+AGG | - | chr2_2:61343635-61343654 | Msa0262400:intron | 30.0% |
| !!! | AGGTCATTTTTTAGGGTTTA+GGG | - | chr2_2:61343636-61343655 | Msa0262400:intron | 30.0% |
| ATAAGTTGTTCATCCAAACA+GGG | + | chr2_2:61343863-61343882 | None:intergenic | 30.0% | |
| AATAAGTTGTTCATCCAAAC+AGG | + | chr2_2:61343864-61343883 | None:intergenic | 30.0% | |
| CATGCAAGTCTAAATAAAAC+TGG | + | chr2_2:61344161-61344180 | None:intergenic | 30.0% | |
| ATACCATCACAAAGAATAGA+GGG | + | chr2_2:61344241-61344260 | None:intergenic | 30.0% | |
| TATACCATCACAAAGAATAG+AGG | + | chr2_2:61344242-61344261 | None:intergenic | 30.0% | |
| AGTATGAATGATGCACATAA+CGG | + | chr2_2:61344292-61344311 | None:intergenic | 30.0% | |
| ACATTACTTTGTTAACTAGG+GGG | + | chr2_2:61344322-61344341 | None:intergenic | 30.0% | |
| GACATTACTTTGTTAACTAG+GGG | + | chr2_2:61344323-61344342 | None:intergenic | 30.0% | |
| GGACATTACTTTGTTAACTA+GGG | + | chr2_2:61344324-61344343 | None:intergenic | 30.0% | |
| AGGACATTACTTTGTTAACT+AGG | + | chr2_2:61344325-61344344 | None:intergenic | 30.0% | |
| ATGAAACATATAGAGGATTG+AGG | + | chr2_2:61344345-61344364 | None:intergenic | 30.0% | |
| !!! | TTCCACATGAATTTGTTTTG+AGG | - | chr2_2:61344446-61344465 | Msa0262400:intron | 30.0% |
| ATTGGAGTTTACCTTTGTTA+AGG | - | chr2_2:61344505-61344524 | Msa0262400:intron | 30.0% | |
| AGCTATTTATAAAACTGGAG+AGG | + | chr2_2:61344535-61344554 | None:intergenic | 30.0% | |
| ! | TCAACAATGATTTTGCAATC+AGG | + | chr2_2:61344655-61344674 | None:intergenic | 30.0% |
| CATTGAGTAACTAATGTACT+TGG | + | chr2_2:61344981-61345000 | None:intergenic | 30.0% | |
| TTCAGAGGCTAAACATAAAA+GGG | + | chr2_2:61345202-61345221 | None:intergenic | 30.0% | |
| ATTCAGAGGCTAAACATAAA+AGG | + | chr2_2:61345203-61345222 | None:intergenic | 30.0% | |
| !! | AAACTTGAAGTACTGGAAAT+TGG | + | chr2_2:61345383-61345402 | None:intergenic | 30.0% |
| ACACTTTACAGGTGAAAATT+GGG | - | chr2_2:61345470-61345489 | Msa0262400:intron | 30.0% | |
| GTTCATTATAATTCTCTCCA+AGG | + | chr2_2:61345549-61345568 | None:intergenic | 30.0% | |
| TGGAGAGAATTATAATGAAC+GGG | - | chr2_2:61345549-61345568 | Msa0262400:intron | 30.0% | |
| !! | ATTTTTCAAACCATGTTGCT+TGG | - | chr2_2:61345693-61345712 | Msa0262400:intron | 30.0% |
| !! | TTTTTCAAACCATGTTGCTT+GGG | - | chr2_2:61345694-61345713 | Msa0262400:intron | 30.0% |
| AGTAACTGCATAAGAATTCA+CGG | + | chr2_2:61346242-61346261 | None:intergenic | 30.0% | |
| AAACAACAAAAACATGTACC+AGG | + | chr2_2:61346274-61346293 | None:intergenic | 30.0% | |
| AAATCTGGTTGTGTTTAATG+TGG | - | chr2_2:61346439-61346458 | Msa0262400:intron | 30.0% | |
| AATCTGGTTGTGTTTAATGT+GGG | - | chr2_2:61346440-61346459 | Msa0262400:intron | 30.0% | |
| GTCATTGTTTAAGAAACTCA+AGG | + | chr2_2:61346596-61346615 | None:intergenic | 30.0% | |
| GTTTCTTAAACAATGACCTT+AGG | - | chr2_2:61346599-61346618 | Msa0262400:intron | 30.0% | |
| AATTGACTGAGATGTAAAAC+TGG | + | chr2_2:61346675-61346694 | None:intergenic | 30.0% | |
| TTGATGTGTAAAAAAGGTCA+GGG | + | chr2_2:61346752-61346771 | None:intergenic | 30.0% | |
| !!! | ACCTTTTTTACACATCAACA+GGG | - | chr2_2:61346754-61346773 | Msa0262400:intron | 30.0% |
| TATTGCAAATTCAGCAAACA+AGG | - | chr2_2:61346876-61346895 | Msa0262400:CDS | 30.0% | |
| ! | GTAGTTCATTTTATGCAACT+TGG | + | chr2_2:61347144-61347163 | None:intergenic | 30.0% |
| AAATCCAACGAACTTATTTC+AGG | + | chr2_2:61347207-61347226 | None:intergenic | 30.0% | |
| TTCTGAACAAGAAAACCGTA+CGG | + | chr2_2:61343142-61343161 | None:intergenic | 35.0% | |
| TTGGGAATTATTGGTGGAAT+TGG | - | chr2_2:61343527-61343546 | Msa0262400:CDS | 35.0% | |
| AGTCTTTACAATGTTGAAGG+AGG | - | chr2_2:61343569-61343588 | Msa0262400:CDS | 35.0% | |
| !!! | GGTCATTTTTTAGGGTTTAG+GGG | - | chr2_2:61343637-61343656 | Msa0262400:intron | 35.0% |
| ATCACAAAATGTGTTCCTTC+AGG | + | chr2_2:61343746-61343765 | None:intergenic | 35.0% | |
| !! | ATTTGGTTGAGAGTACTTCT+GGG | - | chr2_2:61343813-61343832 | Msa0262400:intron | 35.0% |
| TTGAGCTAATCTCTTGACAT+AGG | + | chr2_2:61344107-61344126 | None:intergenic | 35.0% | |
| TAGACTTGCATGTCATCATT+AGG | - | chr2_2:61344169-61344188 | Msa0262400:intron | 35.0% | |
| TTTCCCTCTATTCTTTGTGA+TGG | - | chr2_2:61344235-61344254 | Msa0262400:CDS | 35.0% | |
| GTTATGTGCATCATTCATAC+TGG | - | chr2_2:61344291-61344310 | Msa0262400:CDS | 35.0% | |
| CATTACTTTGTTAACTAGGG+GGG | + | chr2_2:61344321-61344340 | None:intergenic | 35.0% | |
| CTCCTCAAAACAAATTCATG+TGG | + | chr2_2:61344451-61344470 | None:intergenic | 35.0% | |
| ! | GAAGTATTTGAACAACTGCT+AGG | - | chr2_2:61344673-61344692 | Msa0262400:intron | 35.0% |
| ACATTTCAATCTTGTGATCC+TGG | - | chr2_2:61344836-61344855 | Msa0262400:CDS | 35.0% | |
| TATAGTTAAGTCCAAATGCC+AGG | + | chr2_2:61344857-61344876 | None:intergenic | 35.0% | |
| AGGGAGTAGACAATAATCAT+CGG | + | chr2_2:61344884-61344903 | None:intergenic | 35.0% | |
| TTAAATCACCACACAGACAA+CGG | + | chr2_2:61345113-61345132 | None:intergenic | 35.0% | |
| GTCTGTGTGGTGATTTAAAA+TGG | - | chr2_2:61345115-61345134 | Msa0262400:intron | 35.0% | |
| ! | TTTTGATGCCGTTAAACATC+TGG | - | chr2_2:61345152-61345171 | Msa0262400:intron | 35.0% |
| AAAGGGAAATTCAGACTACA+AGG | + | chr2_2:61345185-61345204 | None:intergenic | 35.0% | |
| AGAGTATGATGCAAATTCAG+AGG | + | chr2_2:61345217-61345236 | None:intergenic | 35.0% | |
| TCATAGGTAGCAAAGATGTT+TGG | - | chr2_2:61345347-61345366 | Msa0262400:intron | 35.0% | |
| ! | AGTACTGGAAATTGGTTTCA+TGG | + | chr2_2:61345375-61345394 | None:intergenic | 35.0% |
| CACACTTTACAGGTGAAAAT+TGG | - | chr2_2:61345469-61345488 | Msa0262400:intron | 35.0% | |
| ! | ACATGAAACTTTGAAAGCTG+TGG | - | chr2_2:61345588-61345607 | Msa0262400:intron | 35.0% |
| ATCAAGAGCAATGTTGAAGT+TGG | + | chr2_2:61346061-61346080 | None:intergenic | 35.0% | |
| ! | TCAATTACTAGTCTGACCTT+TGG | - | chr2_2:61346087-61346106 | Msa0262400:intron | 35.0% |
| !!! | ATAAGACAGTGCTAGTTTTG+GGG | + | chr2_2:61346352-61346371 | None:intergenic | 35.0% |
| !!! | GATAAGACAGTGCTAGTTTT+GGG | + | chr2_2:61346353-61346372 | None:intergenic | 35.0% |
| !! | AGATAAGACAGTGCTAGTTT+TGG | + | chr2_2:61346354-61346373 | None:intergenic | 35.0% |
| TGTTCTCTTGATCATGATGT+TGG | - | chr2_2:61346377-61346396 | Msa0262400:intron | 35.0% | |
| CATGATGTTGGATACATCTT+TGG | - | chr2_2:61346389-61346408 | Msa0262400:intron | 35.0% | |
| ACTGTCTTTGTTCACAAATC+TGG | - | chr2_2:61346424-61346443 | Msa0262400:intron | 35.0% | |
| AAATACTAACAAGTGCCCTT+AGG | - | chr2_2:61346476-61346495 | Msa0262400:intron | 35.0% | |
| TTCCTTAAACAATGGCCTAA+GGG | + | chr2_2:61346494-61346513 | None:intergenic | 35.0% | |
| ATTCCTTAAACAATGGCCTA+AGG | + | chr2_2:61346495-61346514 | None:intergenic | 35.0% | |
| AACTCAAGGAAACTTTGTCT+AGG | + | chr2_2:61346582-61346601 | None:intergenic | 35.0% | |
| TGATGTGTAAAAAAGGTCAG+GGG | + | chr2_2:61346751-61346770 | None:intergenic | 35.0% | |
| GTTGATGTGTAAAAAAGGTC+AGG | + | chr2_2:61346753-61346772 | None:intergenic | 35.0% | |
| !!! | GACCTTTTTTACACATCAAC+AGG | - | chr2_2:61346753-61346772 | Msa0262400:intron | 35.0% |
| ACCCTGTTGATGTGTAAAAA+AGG | + | chr2_2:61346758-61346777 | None:intergenic | 35.0% | |
| ! | ATCTTTTGCTGAATCTTCAG+CGG | - | chr2_2:61346917-61346936 | Msa0262400:CDS | 35.0% |
| !!! | TAACCAGCTCATTTTTTGCT+AGG | + | chr2_2:61346955-61346974 | None:intergenic | 35.0% |
| TTCATGAATTCTGACCTAGT+TGG | - | chr2_2:61347048-61347067 | Msa0262400:intron | 35.0% | |
| TCAGGCAGCAAAATTAAATC+AGG | + | chr2_2:61347189-61347208 | None:intergenic | 35.0% | |
| AATTGGGGAAAAAGCTAGTG+AGG | + | chr2_2:61343113-61343132 | None:intergenic | 40.0% | |
| AACAAGAAAACCGTACGGTT+CGG | + | chr2_2:61343137-61343156 | None:intergenic | 40.0% | |
| TACCTTGAAGATTGCGATGA+AGG | + | chr2_2:61343236-61343255 | None:intergenic | 40.0% | |
| CTGGCGAAATTGGGAATTAT+TGG | - | chr2_2:61343518-61343537 | Msa0262400:CDS | 40.0% | |
| GCGAAATTGGGAATTATTGG+TGG | - | chr2_2:61343521-61343540 | Msa0262400:CDS | 40.0% | |
| GTTGTGTAGGTTTATCCTGA+AGG | - | chr2_2:61343728-61343747 | Msa0262400:intron | 40.0% | |
| ! | GAACACATTTTGTGATTCCG+TGG | - | chr2_2:61343750-61343769 | Msa0262400:intron | 40.0% |
| ! | GAAGTACTCTCAACCAAATG+AGG | + | chr2_2:61343812-61343831 | None:intergenic | 40.0% |
| !! | CATTTGGTTGAGAGTACTTC+TGG | - | chr2_2:61343812-61343831 | Msa0262400:intron | 40.0% |
| !! | GCTGTTTTCATAAGCTACCT+TGG | - | chr2_2:61343997-61344016 | Msa0262400:intron | 40.0% |
| ! | CTCTTGACATAGGTATTGTG+AGG | + | chr2_2:61344097-61344116 | None:intergenic | 40.0% |
| GATTTCAGGCATGTTTGGAT+TGG | + | chr2_2:61344139-61344158 | None:intergenic | 40.0% | |
| AACTGGATTTCAGGCATGTT+TGG | + | chr2_2:61344144-61344163 | None:intergenic | 40.0% | |
| GTATTTGAACAACTGCTAGG+TGG | - | chr2_2:61344676-61344695 | Msa0262400:intron | 40.0% | |
| AATCTTGTGATCCTGGCATT+TGG | - | chr2_2:61344843-61344862 | Msa0262400:CDS | 40.0% | |
| GCCAATCACCAGATGTTTAA+CGG | + | chr2_2:61345163-61345182 | None:intergenic | 40.0% | |
| TCAAACAACCCTGTGAAAGT+GGG | + | chr2_2:61345268-61345287 | None:intergenic | 40.0% | |
| ATCAAACAACCCTGTGAAAG+TGG | + | chr2_2:61345269-61345288 | None:intergenic | 40.0% | |
| ACCTGTAAAGTGTGTACATG+CGG | + | chr2_2:61345463-61345482 | None:intergenic | 40.0% | |
| !! | TGAGAGGGCTAAATTTGTTG+TGG | - | chr2_2:61346161-61346180 | Msa0262400:intron | 40.0% |
| ! | AAGTGCTGTAATTAGAGCAC+AGG | - | chr2_2:61346206-61346225 | Msa0262400:intron | 40.0% |
| TTCTTATGCAGTTACTGCTG+TGG | - | chr2_2:61346246-61346265 | Msa0262400:intron | 40.0% | |
| ATGTGTAAAAAAGGTCAGGG+GGG | + | chr2_2:61346749-61346768 | None:intergenic | 40.0% | |
| GATGTGTAAAAAAGGTCAGG+GGG | + | chr2_2:61346750-61346769 | None:intergenic | 40.0% | |
| ! | TTTTACACATCAACAGGGTG+AGG | - | chr2_2:61346759-61346778 | Msa0262400:intron | 40.0% |
| TGTGATGAAAGCTGGATTGT+TGG | + | chr2_2:61346818-61346837 | None:intergenic | 40.0% | |
| TTCAGCAAACAAGGTTTACC+TGG | - | chr2_2:61346885-61346904 | Msa0262400:CDS | 40.0% | |
| GATCCTAGCAAAAAATGAGC+TGG | - | chr2_2:61346949-61346968 | Msa0262400:intron | 40.0% | |
| GTTGTCTGTTCATTCCAACT+AGG | + | chr2_2:61347065-61347084 | None:intergenic | 40.0% | |
| ATGAACAGACAACTCCATGA+CGG | - | chr2_2:61347072-61347091 | Msa0262400:intron | 40.0% | |
| !! | CATGACGGCCTTGTTAATTT+GGG | - | chr2_2:61347087-61347106 | Msa0262400:intron | 40.0% |
| !! | ATGACGGCCTTGTTAATTTG+GGG | - | chr2_2:61347088-61347107 | Msa0262400:intron | 40.0% |
| GCAACTTGGATCATTCGTTT+GGG | + | chr2_2:61347130-61347149 | None:intergenic | 40.0% | |
| TGCAACTTGGATCATTCGTT+TGG | + | chr2_2:61347131-61347150 | None:intergenic | 40.0% | |
| CTACCTCCAGTTATTGAATC+TGG | - | chr2_2:61347160-61347179 | Msa0262400:five_prime_UTR | 40.0% | |
| ATGCCAGATTCAATAACTGG+AGG | + | chr2_2:61347166-61347185 | None:intergenic | 40.0% | |
| AGGATGCCAGATTCAATAAC+TGG | + | chr2_2:61347169-61347188 | None:intergenic | 40.0% | |
| ACAAGAAAACCGTACGGTTC+GGG | + | chr2_2:61343136-61343155 | None:intergenic | 45.0% | |
| CTCCTTCATCGCAATCTTCA+AGG | - | chr2_2:61343231-61343250 | Msa0262400:three_prime_UTR | 45.0% | |
| AAGAACGCGAAAGTTCCAAG+TGG | - | chr2_2:61343479-61343498 | Msa0262400:CDS | 45.0% | |
| TGCATCAACACTGGCGAAAT+TGG | - | chr2_2:61343508-61343527 | Msa0262400:CDS | 45.0% | |
| GCATCAACACTGGCGAAATT+GGG | - | chr2_2:61343509-61343528 | Msa0262400:CDS | 45.0% | |
| GACGGTTAAACACGATAGCA+CGG | + | chr2_2:61343598-61343617 | None:intergenic | 45.0% | |
| ATCGTGTTTAACCGTCTCGT+TGG | - | chr2_2:61343602-61343621 | Msa0262400:CDS | 45.0% | |
| TGTCTTTGACACCAACGAGA+CGG | + | chr2_2:61343616-61343635 | None:intergenic | 45.0% | |
| !! | TCTCGTTGGTGTCAAAGACA+AGG | - | chr2_2:61343616-61343635 | Msa0262400:CDS | 45.0% |
| !! | GGGTGTGTTGTTTGTTGTGT+AGG | - | chr2_2:61343715-61343734 | Msa0262400:intron | 45.0% |
| TTGTGATTCCGTGGTTTGAG+AGG | - | chr2_2:61343759-61343778 | Msa0262400:intron | 45.0% | |
| GCACGAACATCATAGATCAC+CGG | + | chr2_2:61343785-61343804 | None:intergenic | 45.0% | |
| TACTTTGTTAACTAGGGGGG+TGG | + | chr2_2:61344318-61344337 | None:intergenic | 45.0% | |
| GGAGAGGCAATCCTTAACAA+AGG | + | chr2_2:61344519-61344538 | None:intergenic | 45.0% | |
| GATCATTTCCGTTGTCTGTG+TGG | - | chr2_2:61345102-61345121 | Msa0262400:intron | 45.0% | |
| GCCGTTAAACATCTGGTGAT+TGG | - | chr2_2:61345159-61345178 | Msa0262400:intron | 45.0% | |
| TCCTTTCTCCCACTTTCACA+GGG | - | chr2_2:61345257-61345276 | Msa0262400:intron | 45.0% | |
| ACCGCATGTACACACTTTAC+AGG | - | chr2_2:61345459-61345478 | Msa0262400:intron | 45.0% | |
| GCCAGCTACCTACAGTTTAT+CGG | - | chr2_2:61345521-61345540 | Msa0262400:intron | 45.0% | |
| TCCGATAAACTGTAGGTAGC+TGG | + | chr2_2:61345525-61345544 | None:intergenic | 45.0% | |
| AAGTTGGCTGGCATTGTACT+GGG | + | chr2_2:61345617-61345636 | None:intergenic | 45.0% | |
| ! | TAAGTTGGCTGGCATTGTAC+TGG | + | chr2_2:61345618-61345637 | None:intergenic | 45.0% |
| CCAGCCAACTTATTACACAG+CGG | - | chr2_2:61345626-61345645 | Msa0262400:intron | 45.0% | |
| CAGCCAACTTATTACACAGC+GGG | - | chr2_2:61345627-61345646 | Msa0262400:intron | 45.0% | |
| AGGCTGTTAGTCGTGAAATC+CGG | - | chr2_2:61346013-61346032 | Msa0262400:intron | 45.0% | |
| ! | TACTAGTCTGACCTTTGGCA+AGG | - | chr2_2:61346092-61346111 | Msa0262400:intron | 45.0% |
| AGCAGTAAACTCCTTGCCAA+AGG | + | chr2_2:61346106-61346125 | None:intergenic | 45.0% | |
| TGCCCTTAGGCCATTGTTTA+AGG | - | chr2_2:61346489-61346508 | Msa0262400:intron | 45.0% | |
| AACACGTCATGCTAACCCTA+AGG | + | chr2_2:61346618-61346637 | None:intergenic | 45.0% | |
| !! | GCTAAAAGTGCCCAACTGAT+CGG | - | chr2_2:61346781-61346800 | Msa0262400:CDS | 45.0% |
| ! | AATGGCTTGTCCGATCAGTT+GGG | + | chr2_2:61346794-61346813 | None:intergenic | 45.0% |
| GAAAGCTGGATTGTTGGCAA+TGG | + | chr2_2:61346812-61346831 | None:intergenic | 45.0% | |
| ATCCAGCTTTCATCACACTG+AGG | - | chr2_2:61346821-61346840 | Msa0262400:CDS | 45.0% | |
| TTCCTCAGTGTGATGAAAGC+TGG | + | chr2_2:61346826-61346845 | None:intergenic | 45.0% | |
| AACAAGGTTTACCTGGAAGC+AGG | - | chr2_2:61346892-61346911 | Msa0262400:CDS | 45.0% | |
| GAATCTTCAGCGGATCAACT+TGG | - | chr2_2:61346927-61346946 | Msa0262400:intron | 45.0% | |
| CCAAATTAACAAGGCCGTCA+TGG | + | chr2_2:61347089-61347108 | None:intergenic | 45.0% | |
| !! | CCATGACGGCCTTGTTAATT+TGG | - | chr2_2:61347086-61347105 | Msa0262400:intron | 45.0% |
| !! | TGACGGCCTTGTTAATTTGG+GGG | - | chr2_2:61347089-61347108 | Msa0262400:intron | 45.0% |
| ATCCCTCCCCCAAATTAACA+AGG | + | chr2_2:61347098-61347117 | None:intergenic | 45.0% | |
| GCTGCCTGAAATAAGTTCGT+TGG | - | chr2_2:61347200-61347219 | Msa0262400:five_prime_UTR | 45.0% | |
| ! | AACCGTACGGTTCGGGAATT+GGG | + | chr2_2:61343129-61343148 | None:intergenic | 50.0% |
| ! | AAACCGTACGGTTCGGGAAT+TGG | + | chr2_2:61343130-61343149 | None:intergenic | 50.0% |
| AACGCGAAAGTTCCAAGTGG+TGG | - | chr2_2:61343482-61343501 | Msa0262400:CDS | 50.0% | |
| TGTTCGTGCACGTCCTCATT+TGG | - | chr2_2:61343796-61343815 | Msa0262400:intron | 50.0% | |
| GCAGATGGTAAGTCCCTGTT+TGG | - | chr2_2:61343847-61343866 | Msa0262400:intron | 50.0% | |
| GTCCTTTCTCCCACTTTCAC+AGG | - | chr2_2:61345256-61345275 | Msa0262400:intron | 50.0% | |
| ACCCTGTGAAAGTGGGAGAA+AGG | + | chr2_2:61345261-61345280 | None:intergenic | 50.0% | |
| TAAACTGTAGGTAGCTGGCC+AGG | + | chr2_2:61345520-61345539 | None:intergenic | 50.0% | |
| CCAAGGGTCCGATAAACTGT+AGG | + | chr2_2:61345532-61345551 | None:intergenic | 50.0% | |
| CCTACAGTTTATCGGACCCT+TGG | - | chr2_2:61345529-61345548 | Msa0262400:intron | 50.0% | |
| ! | CCGCTGTGTAATAAGTTGGC+TGG | + | chr2_2:61345629-61345648 | None:intergenic | 50.0% |
| CCTCCCGCTGTGTAATAAGT+TGG | + | chr2_2:61345633-61345652 | None:intergenic | 50.0% | |
| CCAACTTATTACACAGCGGG+AGG | - | chr2_2:61345630-61345649 | Msa0262400:intron | 50.0% | |
| ! | CAAACCATGTTGCTTGGGTG+AGG | - | chr2_2:61345699-61345718 | Msa0262400:intron | 50.0% |
| GATACCTCACCCAAGCAACA+TGG | + | chr2_2:61345706-61345725 | None:intergenic | 50.0% | |
| TCCGGAAGATTCTGACTGAG+AGG | - | chr2_2:61346031-61346050 | Msa0262400:intron | 50.0% | |
| CCCTCTCAGTCAGAATCTTC+CGG | + | chr2_2:61346035-61346054 | None:intergenic | 50.0% | |
| CCGGAAGATTCTGACTGAGA+GGG | - | chr2_2:61346032-61346051 | Msa0262400:intron | 50.0% | |
| TGCTGCAATTGAAGCCAAGC+AGG | - | chr2_2:61346122-61346141 | Msa0262400:intron | 50.0% | |
| TGCAATTGAAGCCAAGCAGG+TGG | - | chr2_2:61346125-61346144 | Msa0262400:intron | 50.0% | |
| ! | CAATGGCTTGTCCGATCAGT+TGG | + | chr2_2:61346795-61346814 | None:intergenic | 50.0% |
| AACATGTGCTATCTCCCTCG+CGG | + | chr2_2:61346857-61346876 | None:intergenic | 50.0% | |
| GCAAAAGATCACCTGCTTCC+AGG | + | chr2_2:61346906-61346925 | None:intergenic | 50.0% | |
| !! | GGCCTTGTTAATTTGGGGGA+GGG | - | chr2_2:61347093-61347112 | Msa0262400:intron | 50.0% |
| TCCCCAATTCCCGAACCGTA+CGG | - | chr2_2:61343124-61343143 | Msa0262400:three_prime_UTR | 55.0% | |
| ! | ACCGTACGGTTCGGGAATTG+GGG | + | chr2_2:61343128-61343147 | None:intergenic | 55.0% |
| GATTCCGTGGTTTGAGAGGC+CGG | - | chr2_2:61343763-61343782 | Msa0262400:intron | 55.0% | |
| ATCACCGGCCTCTCAAACCA+CGG | + | chr2_2:61343770-61343789 | None:intergenic | 55.0% | |
| TGGGAGTCGTGATCTGCAGA+TGG | - | chr2_2:61343832-61343851 | Msa0262400:intron | 55.0% | |
| GTCCTTACTCGTCCTTTGCC+TGG | - | chr2_2:61345499-61345518 | Msa0262400:intron | 55.0% | |
| TTCTTGTGCAGCCACCTGCT+TGG | + | chr2_2:61346139-61346158 | None:intergenic | 55.0% | |
| TGGCTGCACAAGAAGCTGAG+AGG | - | chr2_2:61346145-61346164 | Msa0262400:intron | 55.0% | |
| GGCTGCACAAGAAGCTGAGA+GGG | - | chr2_2:61346146-61346165 | Msa0262400:intron | 55.0% | |
| TGAGGAAGATAGAAGCCGCG+AGG | - | chr2_2:61346839-61346858 | Msa0262400:CDS | 55.0% | |
| GAGGAAGATAGAAGCCGCGA+GGG | - | chr2_2:61346840-61346859 | Msa0262400:CDS | 55.0% | |
| !! | CGGCCTTGTTAATTTGGGGG+AGG | - | chr2_2:61347092-61347111 | Msa0262400:intron | 55.0% |
| GTTGATGCAGCGCCACCACT+TGG | + | chr2_2:61343497-61343516 | None:intergenic | 60.0% | |
| ! | TGGTGGCGCTGCATCAACAC+TGG | - | chr2_2:61343499-61343518 | Msa0262400:CDS | 60.0% |
| GGCCAGGCAAAGGACGAGTA+AGG | + | chr2_2:61345504-61345523 | None:intergenic | 60.0% | |
| GTAGGTAGCTGGCCAGGCAA+AGG | + | chr2_2:61345514-61345533 | None:intergenic | 60.0% | |
| GCAGTTACTGCTGTGGTGCC+TGG | - | chr2_2:61346253-61346272 | Msa0262400:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 61343087 | 61347324 | 61343087 | ID=Msa0262400;Name=Msa0262400 |
| chr2_2 | mRNA | 61343087 | 61347324 | 61343087 | ID=Msa0262400-mRNA-1;Parent=Msa0262400;Name=Msa0262400-mRNA-1;_AED=0.11;_eAED=0.11;_QI=166|0.8|0.83|1|0.8|0.66|6|358|267 |
| chr2_2 | exon | 61343087 | 61343636 | 61343087 | ID=Msa0262400-mRNA-1:exon:18881;Parent=Msa0262400-mRNA-1 |
| chr2_2 | exon | 61344184 | 61344396 | 61344184 | ID=Msa0262400-mRNA-1:exon:18880;Parent=Msa0262400-mRNA-1 |
| chr2_2 | exon | 61344760 | 61344930 | 61344760 | ID=Msa0262400-mRNA-1:exon:18879;Parent=Msa0262400-mRNA-1 |
| chr2_2 | exon | 61346615 | 61346674 | 61346615 | ID=Msa0262400-mRNA-1:exon:18878;Parent=Msa0262400-mRNA-1 |
| chr2_2 | exon | 61346774 | 61346941 | 61346774 | ID=Msa0262400-mRNA-1:exon:18877;Parent=Msa0262400-mRNA-1 |
| chr2_2 | exon | 61347159 | 61347324 | 61347159 | ID=Msa0262400-mRNA-1:exon:18876;Parent=Msa0262400-mRNA-1 |
| chr2_2 | five_prime_UTR | 61347159 | 61347324 | 61347159 | ID=Msa0262400-mRNA-1:five_prime_utr;Parent=Msa0262400-mRNA-1 |
| chr2_2 | CDS | 61346774 | 61346941 | 61346774 | ID=Msa0262400-mRNA-1:cds;Parent=Msa0262400-mRNA-1 |
| chr2_2 | CDS | 61346615 | 61346674 | 61346615 | ID=Msa0262400-mRNA-1:cds;Parent=Msa0262400-mRNA-1 |
| chr2_2 | CDS | 61344760 | 61344930 | 61344760 | ID=Msa0262400-mRNA-1:cds;Parent=Msa0262400-mRNA-1 |
| chr2_2 | CDS | 61344184 | 61344396 | 61344184 | ID=Msa0262400-mRNA-1:cds;Parent=Msa0262400-mRNA-1 |
| chr2_2 | CDS | 61343445 | 61343636 | 61343445 | ID=Msa0262400-mRNA-1:cds;Parent=Msa0262400-mRNA-1 |
| chr2_2 | three_prime_UTR | 61343087 | 61343444 | 61343087 | ID=Msa0262400-mRNA-1:three_prime_utr;Parent=Msa0262400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
