Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556680 | XP_003608097.1 | 97.756 | 312 | 7 | 0 | 1 | 312 | 1 | 312 | 0.0 | 630 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556680 | G7JNP6 | 97.756 | 312 | 7 | 0 | 1 | 312 | 1 | 312 | 0.0 | 630 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0103780 | Msa0556680 | 0.808423 | 3.119680e-50 | -8.615850e-47 |
| Msa0423600 | Msa0556680 | 0.810321 | 1.221870e-50 | -8.615850e-47 |
| Msa0556680 | Msa0619330 | 0.833306 | 5.752759e-56 | -8.615850e-47 |
| Msa0556680 | Msa0811510 | 0.801494 | 8.767340e-49 | -8.615850e-47 |
| Msa0556680 | Msa0830120 | 0.804117 | 2.520019e-49 | -8.615850e-47 |
| Msa0556680 | Msa0830450 | 0.803709 | 3.063393e-49 | -8.615850e-47 |
| Msa0556680 | Msa0837590 | 0.800082 | 1.703151e-48 | -8.615850e-47 |
| Msa0556680 | Msa1126910 | 0.822856 | 1.893724e-53 | -8.615850e-47 |
| Msa0556680 | Msa1166180 | 0.803711 | 3.059708e-49 | -8.615850e-47 |
| Msa0556680 | Msa1166280 | 0.803957 | 2.720613e-49 | -8.615850e-47 |
| Msa0556680 | Msa1283770 | 0.814796 | 1.283732e-51 | -8.615850e-47 |
| Msa0556680 | Msa1410170 | 0.802816 | 4.688907e-49 | -8.615850e-47 |
| Msa0556680 | Msa1450420 | 0.803994 | 2.672449e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556680 | MtrunA17_Chr4g0045821 | 91.148 | 305 | 27 | 0 | 8 | 312 | 32 | 336 | 0.0 | 568 |
| Msa0556680 | MtrunA17_Chr4g0045831 | 85.632 | 174 | 23 | 1 | 135 | 306 | 19 | 192 | 9.81e-101 | 295 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556680 | AT5G10460.1 | 68.182 | 308 | 94 | 1 | 5 | 312 | 3 | 306 | 4.39e-157 | 441 |
Find 95 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCTCCATCATGATATTA+AGG | 0.201405 | 4_1:-54946652 | Msa0556680:CDS |
| TATGCCTATGTAAAGATATT+TGG | 0.202224 | 4_1:-54946372 | Msa0556680:three_prime_UTR |
| CTCTTTGCAGGTTTGGTTGT+TGG | 0.251790 | 4_1:-54949450 | Msa0556680:intron |
| GCTTCAACAGTTACATAATC+TGG | 0.272874 | 4_1:+54947789 | None:intergenic |
| GAACTTGGACTCGATGGTTT+TGG | 0.274227 | 4_1:-54946573 | Msa0556680:CDS |
| TCAAAGTTTAAGTGCTTGTT+TGG | 0.302755 | 4_1:-54946263 | Msa0556680:three_prime_UTR |
| AAAAGTTATTGTAGTGGTTT+GGG | 0.311829 | 4_1:+54946445 | None:intergenic |
| TGGAGCTTTGCGCTGCAAAA+AGG | 0.317353 | 4_1:-54947833 | Msa0556680:CDS |
| GGCTCATGGGACTGAAGCCT+TGG | 0.338365 | 4_1:-54947910 | Msa0556680:CDS |
| TAGTTTCCTGTTTGTACAAA+TGG | 0.340623 | 4_1:+54946393 | None:intergenic |
| TTCATTTCACTTGGAGTGGC+AGG | 0.374055 | 4_1:-54948439 | Msa0556680:CDS |
| TTTATTACAAACTTTGTGAT+AGG | 0.382211 | 4_1:-54946288 | Msa0556680:three_prime_UTR |
| AATGGTTTCATCACCTCATC+AGG | 0.382249 | 4_1:+54947471 | None:intergenic |
| TAATAACATACATGTTGAAA+TGG | 0.390410 | 4_1:+54949382 | None:intergenic |
| TGTTGTCCATTTGTACAAAC+AGG | 0.393451 | 4_1:-54946399 | Msa0556680:three_prime_UTR |
| TGCCTTGAAACGGCGTGTTT+CGG | 0.395429 | 4_1:+54949536 | None:intergenic |
| GGGATTCATGCAACTGAACT+TGG | 0.398007 | 4_1:-54946588 | Msa0556680:CDS |
| TGAAGAAGCTGAGTTTGTTT+TGG | 0.398598 | 4_1:-54947931 | Msa0556680:CDS |
| CAGCTAAATATGAAAAGCTT+GGG | 0.409672 | 4_1:-54947518 | Msa0556680:CDS |
| AATTGTACCGTCACATTCAT+CGG | 0.412344 | 4_1:-54949639 | Msa0556680:five_prime_UTR |
| CGCCGAAACACGCCGTTTCA+AGG | 0.415686 | 4_1:-54949538 | Msa0556680:intron |
| CAAACAGGAGAGATGATCCT+TGG | 0.430300 | 4_1:-54948487 | Msa0556680:intron |
| TGATCCTTGGTTTGCATCGT+TGG | 0.434706 | 4_1:-54948474 | Msa0556680:CDS |
| CTGTAGTGAAGAAGAACATT+TGG | 0.435092 | 4_1:+54949599 | None:intergenic |
| GTTGAAATGGCACCGGGATA+AGG | 0.442443 | 4_1:+54949395 | None:intergenic |
| CTTCAGTTTCAGACCTTCAC+CGG | 0.444117 | 4_1:-54949573 | Msa0556680:CDS |
| GTTTGGTTGTTGGATCAGTT+CGG | 0.450145 | 4_1:-54949440 | Msa0556680:CDS |
| GCTCATGGGACTGAAGCCTT+GGG | 0.451202 | 4_1:-54947909 | Msa0556680:CDS |
| GGCGTGTTTCGGCGAGTTGT+CGG | 0.462642 | 4_1:+54949547 | None:intergenic |
| GCAGCTAAATATGAAAAGCT+TGG | 0.466269 | 4_1:-54947519 | Msa0556680:CDS |
| AACAGTTACATAATCTGGAT+TGG | 0.467937 | 4_1:+54947794 | None:intergenic |
| TCTCTCCATCATGATATTAA+GGG | 0.474595 | 4_1:-54946651 | Msa0556680:CDS |
| AGCAAAGACTGGTGGGAAGA+TGG | 0.482844 | 4_1:-54949267 | Msa0556680:CDS |
| GTTTCCAAATATCTTTACAT+AGG | 0.482976 | 4_1:+54946368 | None:intergenic |
| TGTAGTGAAGAAGAACATTT+GGG | 0.484845 | 4_1:+54949600 | None:intergenic |
| TTGTTAGAAAGAAAATCAAA+TGG | 0.489096 | 4_1:+54949696 | None:intergenic |
| CATTTCACTTGGAGTGGCAG+GGG | 0.489985 | 4_1:-54948437 | Msa0556680:CDS |
| GGGCTTGGACTTGCGAGTTG+TGG | 0.493270 | 4_1:-54947961 | Msa0556680:CDS |
| CATTGAACGTGCATTCCCAT+TGG | 0.498390 | 4_1:+54947881 | None:intergenic |
| GATCCTTGGTTTGCATCGTT+GGG | 0.501264 | 4_1:-54948473 | Msa0556680:CDS |
| ATTAAGGGTGCTAATGCTGC+TGG | 0.504655 | 4_1:-54946636 | Msa0556680:CDS |
| GATCTTGTATTCATTTCACT+TGG | 0.513220 | 4_1:-54948448 | Msa0556680:CDS |
| TTGTTCTACCACGTGAATGC+GGG | 0.519095 | 4_1:+54946480 | None:intergenic |
| GAGTTGTCGGAGACCGGTGA+AGG | 0.532249 | 4_1:+54949560 | None:intergenic |
| GCAACTGAACTTGGACTCGA+TGG | 0.533902 | 4_1:-54946579 | Msa0556680:CDS |
| GGAAACATCTGTACCGGCCA+TGG | 0.534358 | 4_1:+54946695 | None:intergenic |
| AGAGACTTGCGTGTGATGCC+TGG | 0.535025 | 4_1:-54947765 | Msa0556680:intron |
| TCTGGATTGGCTACCACCAT+AGG | 0.537526 | 4_1:+54947807 | None:intergenic |
| TTCGGCGAGTTGTCGGAGAC+CGG | 0.538914 | 4_1:+54949554 | None:intergenic |
| AAGTCAGCTGTGGCCATGGC+CGG | 0.540197 | 4_1:-54946708 | Msa0556680:CDS |
| AAAATATAGCAAAGACTGGT+GGG | 0.547019 | 4_1:-54949274 | Msa0556680:CDS |
| GTAGAAAATATAGCAAAGAC+TGG | 0.547614 | 4_1:-54949278 | Msa0556680:CDS |
| ATTGTACCGTCACATTCATC+GGG | 0.548181 | 4_1:-54949638 | Msa0556680:five_prime_UTR |
| AATAGAGAAATGCCTTGAAA+CGG | 0.552579 | 4_1:+54949526 | None:intergenic |
| GAAAATATAGCAAAGACTGG+TGG | 0.554996 | 4_1:-54949275 | Msa0556680:CDS |
| ATACAAGTCAGCTGTGGCCA+TGG | 0.555369 | 4_1:-54946712 | Msa0556680:CDS |
| TGTTAGAAAGAAAATCAAAT+GGG | 0.557959 | 4_1:+54949697 | None:intergenic |
| AAGCCTTGGGTGATGCCAAT+GGG | 0.561195 | 4_1:-54947896 | Msa0556680:CDS |
| CATACATGTTGAAATGGCAC+CGG | 0.562271 | 4_1:+54949388 | None:intergenic |
| ATTGTTCTACCACGTGAATG+CGG | 0.562774 | 4_1:+54946479 | None:intergenic |
| ATTCCCATTGGCATCACCCA+AGG | 0.563797 | 4_1:+54947893 | None:intergenic |
| TGTATTCATTTCACTTGGAG+TGG | 0.565374 | 4_1:-54948443 | Msa0556680:CDS |
| AATGCGGGCAACACATAGGA+TGG | 0.566778 | 4_1:+54946495 | None:intergenic |
| GAAGCCTTGGGTGATGCCAA+TGG | 0.576900 | 4_1:-54947897 | Msa0556680:CDS |
| TTTCTAGGAGCAATTACTAG+TGG | 0.577407 | 4_1:-54949167 | Msa0556680:CDS |
| TCATTTCACTTGGAGTGGCA+GGG | 0.578878 | 4_1:-54948438 | Msa0556680:CDS |
| CGTGAATGCGGGCAACACAT+AGG | 0.584164 | 4_1:+54946491 | None:intergenic |
| AGCTAAATATGAAAAGCTTG+GGG | 0.585901 | 4_1:-54947517 | Msa0556680:CDS |
| TGTTTCCGACTGTATTGCTG+TGG | 0.590268 | 4_1:-54946679 | Msa0556680:CDS |
| ATACATGTTGAAATGGCACC+GGG | 0.592097 | 4_1:+54949389 | None:intergenic |
| ACAGTCGGAAACATCTGTAC+CGG | 0.594740 | 4_1:+54946689 | None:intergenic |
| CAGGGGAGCAATATCTCTTG+AGG | 0.601308 | 4_1:-54948420 | Msa0556680:intron |
| GAGAAACCATGTTGACGGGT+GGG | 0.604243 | 4_1:+54946226 | None:intergenic |
| TCACTCATCAATACTTACAA+AGG | 0.607161 | 4_1:-54949139 | Msa0556680:intron |
| TAGCACCCTTAATATCATGA+TGG | 0.612590 | 4_1:+54946646 | None:intergenic |
| AAATGAGAAACCATGTTGAC+GGG | 0.615989 | 4_1:+54946222 | None:intergenic |
| TGAGAAACCATGTTGACGGG+TGG | 0.619973 | 4_1:+54946225 | None:intergenic |
| ATTCCACCCGATGAATGTGA+CGG | 0.620149 | 4_1:+54949632 | None:intergenic |
| ACGTCTCCCACCCGTCAACA+TGG | 0.620688 | 4_1:-54946232 | Msa0556680:three_prime_UTR |
| ATGTGTTGCCCGCATTCACG+TGG | 0.621579 | 4_1:-54946488 | Msa0556680:CDS |
| TTGTTGATACTCAATCATCA+AGG | 0.622819 | 4_1:+54949735 | None:intergenic |
| GTGAAGGTCTGAAACTGAAG+TGG | 0.623751 | 4_1:+54949576 | None:intergenic |
| AAAATGAGAAACCATGTTGA+CGG | 0.628512 | 4_1:+54946221 | None:intergenic |
| CAGTTCGGCGTCCTCCACGA+TGG | 0.634291 | 4_1:-54949425 | Msa0556680:CDS |
| GATGGAAAACAACCTTATCC+CGG | 0.637366 | 4_1:-54949407 | Msa0556680:CDS |
| ATGGATGGGCAAACCTGATG+AGG | 0.637905 | 4_1:-54947484 | Msa0556680:intron |
| CTTCCCAACGATGCAAACCA+AGG | 0.648217 | 4_1:+54948470 | None:intergenic |
| CGTGGTAGAACAATATCGCA+AGG | 0.650907 | 4_1:-54946470 | Msa0556680:exon |
| GTTTCCGACTGTATTGCTGT+GGG | 0.657163 | 4_1:-54946678 | Msa0556680:CDS |
| ATCACCCACAGCAATACAGT+CGG | 0.657241 | 4_1:+54946674 | None:intergenic |
| GATAATATACAAGTCAGCTG+TGG | 0.670551 | 4_1:-54946718 | Msa0556680:CDS |
| GTACCGTCACATTCATCGGG+TGG | 0.681479 | 4_1:-54949635 | Msa0556680:five_prime_UTR |
| GCTAAATATGAAAAGCTTGG+GGG | 0.702982 | 4_1:-54947516 | Msa0556680:CDS |
| AAAATCAAATGGGTACTGTG+TGG | 0.707214 | 4_1:+54949707 | None:intergenic |
| CAAATGGGTACTGTGTGGCG+TGG | 0.735064 | 4_1:+54949712 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAACAAAAAAGAAATTTT+AGG | + | chr4_1:54946661-54946680 | None:intergenic | 10.0% |
| !! | TCAAATATAAAAAAAATACA+GGG | - | chr4_1:54947892-54947911 | Msa0556680:CDS | 10.0% |
| !! | ATTCAAAGAATTGAAAAATT+TGG | - | chr4_1:54947797-54947816 | Msa0556680:CDS | 15.0% |
| !! | GTCAAATATAAAAAAAATAC+AGG | - | chr4_1:54947891-54947910 | Msa0556680:CDS | 15.0% |
| !! | TTGGTTTAAATTATCTAAAA+CGG | - | chr4_1:54948894-54948913 | Msa0556680:intron | 15.0% |
| !! | ATGATCGTATATAAATAAAT+AGG | + | chr4_1:54949137-54949156 | None:intergenic | 15.0% |
| !!! | TCCATGTTTATTTTTCATTT+TGG | + | chr4_1:54946213-54946232 | None:intergenic | 20.0% |
| !! | TGTTAGAAAGAAAATCAAAT+GGG | + | chr4_1:54946274-54946293 | None:intergenic | 20.0% |
| !! | TTGTTAGAAAGAAAATCAAA+TGG | + | chr4_1:54946275-54946294 | None:intergenic | 20.0% |
| !! | TAATAACATACATGTTGAAA+TGG | + | chr4_1:54946589-54946608 | None:intergenic | 20.0% |
| !! | GTTATTATGTCTTATCTTTA+TGG | - | chr4_1:54946602-54946621 | Msa0556680:CDS | 20.0% |
| !! | ATAAGAAACAGAAATTATGT+TGG | + | chr4_1:54946863-54946882 | None:intergenic | 20.0% |
| !! | TCTCAACTAAAAAATACATA+CGG | + | chr4_1:54947328-54947347 | None:intergenic | 20.0% |
| !!! | ATAATATCTGTTTTTCAAAC+AGG | - | chr4_1:54947466-54947485 | Msa0556680:intron | 20.0% |
| !!! | TTTTCTTGTGCAATATAAAA+TGG | - | chr4_1:54947652-54947671 | Msa0556680:intron | 20.0% |
| !! | ATTCAATTCAAGTCAAATTA+TGG | - | chr4_1:54947869-54947888 | Msa0556680:CDS | 20.0% |
| !!! | AAGTTTTCATTTATATGACA+TGG | - | chr4_1:54948303-54948322 | Msa0556680:intron | 20.0% |
| !! | AGAGAAAACAATTATCAAAA+TGG | + | chr4_1:54948539-54948558 | None:intergenic | 20.0% |
| !! | AGTAAGTAATTCTCATTTAT+TGG | - | chr4_1:54948875-54948894 | Msa0556680:intron | 20.0% |
| !!! | TGTAGAATTTGTTTTAGATT+GGG | + | chr4_1:54949035-54949054 | None:intergenic | 20.0% |
| !!! | ATGTAGAATTTGTTTTAGAT+TGG | + | chr4_1:54949036-54949055 | None:intergenic | 20.0% |
| !! | AACAAAAAAAGTTATTGTAG+TGG | + | chr4_1:54949532-54949551 | None:intergenic | 20.0% |
| !! | TTTATTACAAACTTTGTGAT+AGG | - | chr4_1:54949680-54949699 | Msa0556680:five_prime_UTR | 20.0% |
| ! | GCCAAAATGAAAAATAAACA+TGG | - | chr4_1:54946209-54946228 | Msa0556680:three_prime_UTR | 25.0% |
| ! | TTATGTCTTATCTTTATGGT+TGG | - | chr4_1:54946606-54946625 | Msa0556680:CDS | 25.0% |
| !!! | ATTTTAGGATCATGTATATG+TGG | + | chr4_1:54946646-54946665 | None:intergenic | 25.0% |
| !!! | ACATTTTTTCTGTTTCGTTT+AGG | - | chr4_1:54946908-54946927 | Msa0556680:intron | 25.0% |
| !! | TTAAGTTGTTTATCCCAAAT+AGG | - | chr4_1:54947217-54947236 | Msa0556680:intron | 25.0% |
| ! | TAAGTTGTTTATCCCAAATA+GGG | - | chr4_1:54947218-54947237 | Msa0556680:intron | 25.0% |
| !! | GAAAATAACATTTAGCCTTT+AGG | + | chr4_1:54947637-54947656 | None:intergenic | 25.0% |
| ! | ATATAAAATGGCATGATTCT+TGG | - | chr4_1:54947664-54947683 | Msa0556680:intron | 25.0% |
| ! | TATAAAATGGCATGATTCTT+GGG | - | chr4_1:54947665-54947684 | Msa0556680:intron | 25.0% |
| ! | AACTAATTATTCTGCTTACA+AGG | - | chr4_1:54947733-54947752 | Msa0556680:intron | 25.0% |
| ! | ACAATCAGTTATCTATTGTT+TGG | + | chr4_1:54947829-54947848 | None:intergenic | 25.0% |
| ! | AAACAATAGATAACTGATTG+TGG | - | chr4_1:54947828-54947847 | Msa0556680:CDS | 25.0% |
| ! | CTATTGATGCATATTATCTT+TGG | + | chr4_1:54947951-54947970 | None:intergenic | 25.0% |
| ! | CATACAAATAACTTTGTCTA+GGG | - | chr4_1:54947987-54948006 | Msa0556680:intron | 25.0% |
| ! | TGAAGACCTTGAAAAAATAT+TGG | - | chr4_1:54948115-54948134 | Msa0556680:intron | 25.0% |
| !!! | AAAGCTCCAATATTTTTTCA+AGG | + | chr4_1:54948124-54948143 | None:intergenic | 25.0% |
| !! | TGCTTTATCTTCTAAAAACA+TGG | - | chr4_1:54948232-54948251 | Msa0556680:intron | 25.0% |
| ! | GGATTTATATCACATAGAAA+TGG | + | chr4_1:54948518-54948537 | None:intergenic | 25.0% |
| ! | TGATGTTTAATCTTGTAGAA+AGG | + | chr4_1:54948712-54948731 | None:intergenic | 25.0% |
| ! | CATAATGATTAACATCTTTG+TGG | - | chr4_1:54949154-54949173 | Msa0556680:CDS | 25.0% |
| !! | ATCCAATCAATTTTTATCAC+TGG | - | chr4_1:54949356-54949375 | Msa0556680:intron | 25.0% |
| !! | AATCAATTTTTATCACTGGA+GGG | - | chr4_1:54949360-54949379 | Msa0556680:intron | 25.0% |
| ! | AAAAGTTATTGTAGTGGTTT+GGG | + | chr4_1:54949526-54949545 | None:intergenic | 25.0% |
| ! | AAAAAGTTATTGTAGTGGTT+TGG | + | chr4_1:54949527-54949546 | None:intergenic | 25.0% |
| ! | TATGCCTATGTAAAGATATT+TGG | - | chr4_1:54949596-54949615 | Msa0556680:CDS | 25.0% |
| ! | GTTTCCAAATATCTTTACAT+AGG | + | chr4_1:54949603-54949622 | None:intergenic | 25.0% |
| TTGTTGATACTCAATCATCA+AGG | + | chr4_1:54946236-54946255 | None:intergenic | 30.0% | |
| TGTAGTGAAGAAGAACATTT+GGG | + | chr4_1:54946371-54946390 | None:intergenic | 30.0% | |
| AATAGAGAAATGCCTTGAAA+CGG | + | chr4_1:54946445-54946464 | None:intergenic | 30.0% | |
| TTAATGTTGTTACTCTTTGC+AGG | - | chr4_1:54946506-54946525 | Msa0556680:CDS | 30.0% | |
| GTAGAAAATATAGCAAAGAC+TGG | - | chr4_1:54946690-54946709 | Msa0556680:CDS | 30.0% | |
| AAAATATAGCAAAGACTGGT+GGG | - | chr4_1:54946694-54946713 | Msa0556680:CDS | 30.0% | |
| CTTGAAAAAGTCAAAAGTCT+TGG | - | chr4_1:54946762-54946781 | Msa0556680:intron | 30.0% | |
| ! | TTTGATGCTTCTCTTTTTCT+AGG | - | chr4_1:54946786-54946805 | Msa0556680:intron | 30.0% |
| TCACTCATCAATACTTACAA+AGG | - | chr4_1:54946829-54946848 | Msa0556680:intron | 30.0% | |
| AACGAAACAGAAAAAATGTG+TGG | + | chr4_1:54946907-54946926 | None:intergenic | 30.0% | |
| TCTACTGACATAAACATTTG+TGG | - | chr4_1:54946960-54946979 | Msa0556680:intron | 30.0% | |
| TGACATAAACATTTGTGGTT+GGG | - | chr4_1:54946965-54946984 | Msa0556680:intron | 30.0% | |
| TATGAAAACAGCTTATGACA+TGG | - | chr4_1:54947064-54947083 | Msa0556680:intron | 30.0% | |
| AAAATACATACGGATGAAAC+AGG | + | chr4_1:54947318-54947337 | None:intergenic | 30.0% | |
| !! | TATCTGTAGAATTTGTTGCA+CGG | + | chr4_1:54947353-54947372 | None:intergenic | 30.0% |
| GCAACAAATTCTACAGATAT+CGG | - | chr4_1:54947354-54947373 | Msa0556680:intron | 30.0% | |
| CAACAAATTCTACAGATATC+GGG | - | chr4_1:54947355-54947374 | Msa0556680:intron | 30.0% | |
| AACAAATTCTACAGATATCG+GGG | - | chr4_1:54947356-54947375 | Msa0556680:intron | 30.0% | |
| TAAGAAAATTCTCCTGCTAA+TGG | + | chr4_1:54947421-54947440 | None:intergenic | 30.0% | |
| GATCTTGTATTCATTTCACT+TGG | - | chr4_1:54947520-54947539 | Msa0556680:CDS | 30.0% | |
| ATAGTTGTCTTGGTAAACTA+AGG | - | chr4_1:54947690-54947709 | Msa0556680:intron | 30.0% | |
| AATACCTTCAAAGTTTCATC+GGG | + | chr4_1:54947780-54947799 | None:intergenic | 30.0% | |
| GAATACCTTCAAAGTTTCAT+CGG | + | chr4_1:54947781-54947800 | None:intergenic | 30.0% | |
| GCATACAAATAACTTTGTCT+AGG | - | chr4_1:54947986-54948005 | Msa0556680:intron | 30.0% | |
| AACAGTTACATAATCTGGAT+TGG | + | chr4_1:54948177-54948196 | None:intergenic | 30.0% | |
| AGTACACACAATTTGGTATA+AGG | + | chr4_1:54948408-54948427 | None:intergenic | 30.0% | |
| AGTATGAAGTACACACAATT+TGG | + | chr4_1:54948415-54948434 | None:intergenic | 30.0% | |
| GTGTGTACTTCATACTTATT+AGG | - | chr4_1:54948419-54948438 | Msa0556680:intron | 30.0% | |
| CAGCTAAATATGAAAAGCTT+GGG | - | chr4_1:54948450-54948469 | Msa0556680:CDS | 30.0% | |
| AGCTAAATATGAAAAGCTTG+GGG | - | chr4_1:54948451-54948470 | Msa0556680:CDS | 30.0% | |
| TTGTTCACAATTGTAATTGC+AGG | + | chr4_1:54948771-54948790 | None:intergenic | 30.0% | |
| ACTTACAACTTAGTTTAGCT+TGG | + | chr4_1:54948848-54948867 | None:intergenic | 30.0% | |
| GAAAATAATCCTCAAGTCAA+GGG | + | chr4_1:54948991-54949010 | None:intergenic | 30.0% | |
| TGAAAATAATCCTCAAGTCA+AGG | + | chr4_1:54948992-54949011 | None:intergenic | 30.0% | |
| TCTACATAATTCTTTGTCCA+TGG | - | chr4_1:54949049-54949068 | Msa0556680:intron | 30.0% | |
| GAGAATATATTTCAATGAGC+TGG | + | chr4_1:54949086-54949105 | None:intergenic | 30.0% | |
| TTCTCTCCATCATGATATTA+AGG | - | chr4_1:54949316-54949335 | Msa0556680:intron | 30.0% | |
| TCTCTCCATCATGATATTAA+GGG | - | chr4_1:54949317-54949336 | Msa0556680:intron | 30.0% | |
| CTCCAGTGATAAAAATTGAT+TGG | + | chr4_1:54949361-54949380 | None:intergenic | 30.0% | |
| ! | CAATCAATTTTTATCACTGG+AGG | - | chr4_1:54949359-54949378 | Msa0556680:intron | 30.0% |
| TAGTTTCCTGTTTGTACAAA+TGG | + | chr4_1:54949578-54949597 | None:intergenic | 30.0% | |
| TCAAAGTTTAAGTGCTTGTT+TGG | - | chr4_1:54949705-54949724 | Msa0556680:five_prime_UTR | 30.0% | |
| AAAATGAGAAACCATGTTGA+CGG | + | chr4_1:54949750-54949769 | None:intergenic | 30.0% | |
| ! | TTCTCATTTTACAGCATGTT+TGG | - | chr4_1:54949760-54949779 | Msa0556680:five_prime_UTR | 30.0% |
| ! | AAAATCAAATGGGTACTGTG+TGG | + | chr4_1:54946264-54946283 | None:intergenic | 35.0% |
| ! | GAATGTGACGGTACAATTTT+CGG | + | chr4_1:54946327-54946346 | None:intergenic | 35.0% |
| AATTGTACCGTCACATTCAT+CGG | - | chr4_1:54946329-54946348 | Msa0556680:three_prime_UTR | 35.0% | |
| CTGTAGTGAAGAAGAACATT+TGG | + | chr4_1:54946372-54946391 | None:intergenic | 35.0% | |
| TAGGATCATGTATATGTGGT+TGG | + | chr4_1:54946642-54946661 | None:intergenic | 35.0% | |
| GAAAATATAGCAAAGACTGG+TGG | - | chr4_1:54946693-54946712 | Msa0556680:CDS | 35.0% | |
| ! | TTTCTAGGAGCAATTACTAG+TGG | - | chr4_1:54946801-54946820 | Msa0556680:intron | 35.0% |
| ! | TGTTTCGTTTAGGTTCTGTT+TGG | - | chr4_1:54946918-54946937 | Msa0556680:intron | 35.0% |
| CTGACATAAACATTTGTGGT+TGG | - | chr4_1:54946964-54946983 | Msa0556680:intron | 35.0% | |
| GTAAGCTGAAAACAGCTTAT+GGG | + | chr4_1:54947020-54947039 | None:intergenic | 35.0% | |
| AGTAAGCTGAAAACAGCTTA+TGG | + | chr4_1:54947021-54947040 | None:intergenic | 35.0% | |
| !! | ATCTGTAGAATTTGTTGCAC+GGG | + | chr4_1:54947352-54947371 | None:intergenic | 35.0% |
| TGTATTCATTTCACTTGGAG+TGG | - | chr4_1:54947525-54947544 | Msa0556680:CDS | 35.0% | |
| TTCTTGGGTAATAGTTGTCT+TGG | - | chr4_1:54947680-54947699 | Msa0556680:intron | 35.0% | |
| CAATAGATAACTGATTGTGG+TGG | - | chr4_1:54947831-54947850 | Msa0556680:CDS | 35.0% | |
| ! | AAATAACTTTGTCTAGGGCT+TGG | - | chr4_1:54947992-54948011 | Msa0556680:intron | 35.0% |
| !! | TGAAGAAGCTGAGTTTGTTT+TGG | - | chr4_1:54948037-54948056 | Msa0556680:intron | 35.0% |
| GCTTCAACAGTTACATAATC+TGG | + | chr4_1:54948182-54948201 | None:intergenic | 35.0% | |
| GAAGATAAAGCAAATTCACC+AGG | + | chr4_1:54948224-54948243 | None:intergenic | 35.0% | |
| GAAAACTTATGCTGCAACTT+TGG | + | chr4_1:54948291-54948310 | None:intergenic | 35.0% | |
| ATAAGGTGAAACTTGATAGG+AGG | + | chr4_1:54948391-54948410 | None:intergenic | 35.0% | |
| GGTATAAGGTGAAACTTGAT+AGG | + | chr4_1:54948394-54948413 | None:intergenic | 35.0% | |
| GCAGCTAAATATGAAAAGCT+TGG | - | chr4_1:54948449-54948468 | Msa0556680:CDS | 35.0% | |
| GCTAAATATGAAAAGCTTGG+GGG | - | chr4_1:54948452-54948471 | Msa0556680:CDS | 35.0% | |
| ACTCCATTCTATTAGTACCT+AGG | - | chr4_1:54948574-54948593 | Msa0556680:intron | 35.0% | |
| CATGCGTACAATATACAAGT+AGG | - | chr4_1:54948609-54948628 | Msa0556680:intron | 35.0% | |
| ACATCATGTTCAATCCTTCA+AGG | - | chr4_1:54948726-54948745 | Msa0556680:intron | 35.0% | |
| GCTAACATAGAAATCCTTGA+AGG | + | chr4_1:54948743-54948762 | None:intergenic | 35.0% | |
| GATAATATACAAGTCAGCTG+TGG | - | chr4_1:54949250-54949269 | Msa0556680:CDS | 35.0% | |
| TAGCACCCTTAATATCATGA+TGG | + | chr4_1:54949325-54949344 | None:intergenic | 35.0% | |
| TGTTGTCCATTTGTACAAAC+AGG | - | chr4_1:54949569-54949588 | Msa0556680:CDS | 35.0% | |
| AAATGAGAAACCATGTTGAC+GGG | + | chr4_1:54949749-54949768 | None:intergenic | 35.0% | |
| ATTGTACCGTCACATTCATC+GGG | - | chr4_1:54946330-54946349 | Msa0556680:three_prime_UTR | 40.0% | |
| GTTGTTACTCTTTGCAGGTT+TGG | - | chr4_1:54946511-54946530 | Msa0556680:CDS | 40.0% | |
| GTTTGGTTGTTGGATCAGTT+CGG | - | chr4_1:54946528-54946547 | Msa0556680:CDS | 40.0% | |
| !! | GATAAGGTTGTTTTCCATCG+TGG | + | chr4_1:54946560-54946579 | None:intergenic | 40.0% |
| GATGGAAAACAACCTTATCC+CGG | - | chr4_1:54946561-54946580 | Msa0556680:CDS | 40.0% | |
| ATACATGTTGAAATGGCACC+GGG | + | chr4_1:54946582-54946601 | None:intergenic | 40.0% | |
| CATACATGTTGAAATGGCAC+CGG | + | chr4_1:54946583-54946602 | None:intergenic | 40.0% | |
| CTTACAAAAGCTCTCCATGA+TGG | - | chr4_1:54947039-54947058 | Msa0556680:intron | 40.0% | |
| !! | GCTGTTTTCATAAGCCATCA+TGG | + | chr4_1:54947056-54947075 | None:intergenic | 40.0% |
| !! | GCTGTTTTCATAAGCCATCA+TGG | + | chr4_1:54947056-54947075 | None:intergenic | 40.0% |
| GAGACACTATAGCCCTATTT+GGG | + | chr4_1:54947233-54947252 | None:intergenic | 40.0% | |
| TGAGACACTATAGCCCTATT+TGG | + | chr4_1:54947234-54947253 | None:intergenic | 40.0% | |
| TAGGAAGAAGCAACGGAATA+TGG | + | chr4_1:54947618-54947637 | None:intergenic | 40.0% | |
| ATTCCGTTGCTTCTTCCTAA+AGG | - | chr4_1:54947619-54947638 | Msa0556680:intron | 40.0% | |
| ! | TAGCCTTTAGGAAGAAGCAA+CGG | + | chr4_1:54947625-54947644 | None:intergenic | 40.0% |
| TTGGTAAACTAAGGAGCGAT+TGG | - | chr4_1:54947699-54947718 | Msa0556680:intron | 40.0% | |
| AGGAGCGATTGGATTTATAG+TGG | - | chr4_1:54947710-54947729 | Msa0556680:intron | 40.0% | |
| TTTCATCGGGTAGACTTAGT+AGG | + | chr4_1:54947767-54947786 | None:intergenic | 40.0% | |
| TCTACCCGATGAAACTTTGA+AGG | - | chr4_1:54947773-54947792 | Msa0556680:CDS | 40.0% | |
| !!! | CTGAGTTTGTTTTGGCTCAT+GGG | - | chr4_1:54948045-54948064 | Msa0556680:intron | 40.0% |
| TGCAAAAAGGATTCCTATGG+TGG | - | chr4_1:54948148-54948167 | Msa0556680:intron | 40.0% | |
| AATGGTTTCATCACCTCATC+AGG | + | chr4_1:54948500-54948519 | None:intergenic | 40.0% | |
| CAGCCTAGGTACTAATAGAA+TGG | + | chr4_1:54948580-54948599 | None:intergenic | 40.0% | |
| GTTAGGTAAAGTCATCACTC+CGG | + | chr4_1:54948963-54948982 | None:intergenic | 40.0% | |
| AATAATCCTCAAGTCAAGGG+TGG | + | chr4_1:54948988-54949007 | None:intergenic | 40.0% | |
| ATTGTTCTACCACGTGAATG+CGG | + | chr4_1:54949492-54949511 | None:intergenic | 40.0% | |
| ATTCCACCCGATGAATGTGA+CGG | + | chr4_1:54946339-54946358 | None:intergenic | 45.0% | |
| ! | GTGAAGGTCTGAAACTGAAG+TGG | + | chr4_1:54946395-54946414 | None:intergenic | 45.0% |
| CTTCAGTTTCAGACCTTCAC+CGG | - | chr4_1:54946395-54946414 | Msa0556680:three_prime_UTR | 45.0% | |
| ! | CTCTTTGCAGGTTTGGTTGT+TGG | - | chr4_1:54946518-54946537 | Msa0556680:CDS | 45.0% |
| !! | AAGGTTGTTTTCCATCGTGG+AGG | + | chr4_1:54946557-54946576 | None:intergenic | 45.0% |
| TTTGTGGTTGGGAGAGCTTA+TGG | - | chr4_1:54946976-54946995 | Msa0556680:intron | 45.0% | |
| GTAAGCTGCAAAACAGTGTC+TGG | + | chr4_1:54947090-54947109 | None:intergenic | 45.0% | |
| CTTCGATAAGCTCTCCATGA+TGG | - | chr4_1:54947109-54947128 | Msa0556680:intron | 45.0% | |
| GGTGATCGAATACACGACAA+GGG | + | chr4_1:54947297-54947316 | None:intergenic | 45.0% | |
| AGGTGATCGAATACACGACA+AGG | + | chr4_1:54947298-54947317 | None:intergenic | 45.0% | |
| TCTACAGATATCGGGGAAAG+TGG | - | chr4_1:54947363-54947382 | Msa0556680:intron | 45.0% | |
| TTATGCCACATGCCATTAGC+AGG | - | chr4_1:54947406-54947425 | Msa0556680:intron | 45.0% | |
| ATTCTCCTGCTAATGGCATG+TGG | + | chr4_1:54947414-54947433 | None:intergenic | 45.0% | |
| CAAACAGGAGAGATGATCCT+TGG | - | chr4_1:54947481-54947500 | Msa0556680:intron | 45.0% | |
| !! | TGATCCTTGGTTTGCATCGT+TGG | - | chr4_1:54947494-54947513 | Msa0556680:CDS | 45.0% |
| !! | GATCCTTGGTTTGCATCGTT+GGG | - | chr4_1:54947495-54947514 | Msa0556680:CDS | 45.0% |
| TTCATTTCACTTGGAGTGGC+AGG | - | chr4_1:54947529-54947548 | Msa0556680:CDS | 45.0% | |
| TCATTTCACTTGGAGTGGCA+GGG | - | chr4_1:54947530-54947549 | Msa0556680:CDS | 45.0% | |
| ATCGGGTAGACTTAGTAGGA+AGG | + | chr4_1:54947763-54947782 | None:intergenic | 45.0% | |
| !!! | GCTGAGTTTGTTTTGGCTCA+TGG | - | chr4_1:54948044-54948063 | Msa0556680:intron | 45.0% |
| CATTGAACGTGCATTCCCAT+TGG | + | chr4_1:54948090-54948109 | None:intergenic | 45.0% | |
| CGCTGCAAAAAGGATTCCTA+TGG | - | chr4_1:54948145-54948164 | Msa0556680:intron | 45.0% | |
| GCATGTAATCTTAGCAGCCT+AGG | + | chr4_1:54948594-54948613 | None:intergenic | 45.0% | |
| TCGTGAGTTTCTTCCCTAGT+TGG | - | chr4_1:54948655-54948674 | Msa0556680:intron | 45.0% | |
| CCAAATGAGCAAGCCAACTA+GGG | + | chr4_1:54948671-54948690 | None:intergenic | 45.0% | |
| !! | GAATTCTAGAGTTGCGACTC+CGG | - | chr4_1:54948941-54948960 | Msa0556680:intron | 45.0% |
| TCAAGTCAAGGGTGGTAGTT+AGG | + | chr4_1:54948980-54948999 | None:intergenic | 45.0% | |
| ! | TAACTACCACCCTTGACTTG+AGG | - | chr4_1:54948979-54948998 | Msa0556680:intron | 45.0% |
| TTTAGATTGGGAAGACGCAC+AGG | + | chr4_1:54949023-54949042 | None:intergenic | 45.0% | |
| ACAGTCGGAAACATCTGTAC+CGG | + | chr4_1:54949282-54949301 | None:intergenic | 45.0% | |
| TGTTTCCGACTGTATTGCTG+TGG | - | chr4_1:54949289-54949308 | Msa0556680:intron | 45.0% | |
| GTTTCCGACTGTATTGCTGT+GGG | - | chr4_1:54949290-54949309 | Msa0556680:intron | 45.0% | |
| ATCACCCACAGCAATACAGT+CGG | + | chr4_1:54949297-54949316 | None:intergenic | 45.0% | |
| !! | ATTAAGGGTGCTAATGCTGC+TGG | - | chr4_1:54949332-54949351 | Msa0556680:intron | 45.0% |
| GGGATTCATGCAACTGAACT+TGG | - | chr4_1:54949380-54949399 | Msa0556680:intron | 45.0% | |
| ! | GAACTTGGACTCGATGGTTT+TGG | - | chr4_1:54949395-54949414 | Msa0556680:CDS | 45.0% |
| TTGTTCTACCACGTGAATGC+GGG | + | chr4_1:54949491-54949510 | None:intergenic | 45.0% | |
| CGTGGTAGAACAATATCGCA+AGG | - | chr4_1:54949498-54949517 | Msa0556680:intron | 45.0% | |
| TGCCTTGAAACGGCGTGTTT+CGG | + | chr4_1:54946435-54946454 | None:intergenic | 50.0% | |
| ! | GTTGAAATGGCACCGGGATA+AGG | + | chr4_1:54946576-54946595 | None:intergenic | 50.0% |
| AGCAAAGACTGGTGGGAAGA+TGG | - | chr4_1:54946701-54946720 | Msa0556680:CDS | 50.0% | |
| CTTCCCAACGATGCAAACCA+AGG | + | chr4_1:54947501-54947520 | None:intergenic | 50.0% | |
| CATTTCACTTGGAGTGGCAG+GGG | - | chr4_1:54947531-54947550 | Msa0556680:intron | 50.0% | |
| CAGGGGAGCAATATCTCTTG+AGG | - | chr4_1:54947548-54947567 | Msa0556680:intron | 50.0% | |
| GCAATATCTCTTGAGGTGCG+TGG | - | chr4_1:54947555-54947574 | Msa0556680:intron | 50.0% | |
| AAGCCTTGGGTGATGCCAAT+GGG | - | chr4_1:54948072-54948091 | Msa0556680:intron | 50.0% | |
| ATTCCCATTGGCATCACCCA+AGG | + | chr4_1:54948078-54948097 | None:intergenic | 50.0% | |
| TGGAGCTTTGCGCTGCAAAA+AGG | - | chr4_1:54948135-54948154 | Msa0556680:intron | 50.0% | |
| !! | TCTGGATTGGCTACCACCAT+AGG | + | chr4_1:54948164-54948183 | None:intergenic | 50.0% |
| AGCTTGGGGGTGAAGTGAAA+TGG | - | chr4_1:54948465-54948484 | Msa0556680:CDS | 50.0% | |
| TGGGGGTGAAGTGAAATGGA+TGG | - | chr4_1:54948469-54948488 | Msa0556680:CDS | 50.0% | |
| GGGGGTGAAGTGAAATGGAT+GGG | - | chr4_1:54948470-54948489 | Msa0556680:CDS | 50.0% | |
| ATGGATGGGCAAACCTGATG+AGG | - | chr4_1:54948484-54948503 | Msa0556680:intron | 50.0% | |
| !! | CCCTAGTTGGCTTGCTCATT+TGG | - | chr4_1:54948668-54948687 | Msa0556680:intron | 50.0% |
| GCCAAATGAGCAAGCCAACT+AGG | + | chr4_1:54948672-54948691 | None:intergenic | 50.0% | |
| GCTTGCTCATTTGGCACACA+AGG | - | chr4_1:54948677-54948696 | Msa0556680:intron | 50.0% | |
| AGCTGGATCATTGCAAGCCA+TGG | + | chr4_1:54949069-54949088 | None:intergenic | 50.0% | |
| ATACAAGTCAGCTGTGGCCA+TGG | - | chr4_1:54949256-54949275 | Msa0556680:CDS | 50.0% | |
| GCAACTGAACTTGGACTCGA+TGG | - | chr4_1:54949389-54949408 | Msa0556680:intron | 50.0% | |
| AATGCGGGCAACACATAGGA+TGG | + | chr4_1:54949476-54949495 | None:intergenic | 50.0% | |
| ! | GAGAAACCATGTTGACGGGT+GGG | + | chr4_1:54949745-54949764 | None:intergenic | 50.0% |
| TGAGAAACCATGTTGACGGG+TGG | + | chr4_1:54949746-54949765 | None:intergenic | 50.0% | |
| ! | CAAATGGGTACTGTGTGGCG+TGG | + | chr4_1:54946259-54946278 | None:intergenic | 55.0% |
| GTACCGTCACATTCATCGGG+TGG | - | chr4_1:54946333-54946352 | Msa0556680:three_prime_UTR | 55.0% | |
| CAGATATCGGGGAAAGTGGC+AGG | - | chr4_1:54947367-54947386 | Msa0556680:intron | 55.0% | |
| GCTCATGGGACTGAAGCCTT+GGG | - | chr4_1:54948059-54948078 | Msa0556680:intron | 55.0% | |
| GAAGCCTTGGGTGATGCCAA+TGG | - | chr4_1:54948071-54948090 | Msa0556680:intron | 55.0% | |
| AGAGACTTGCGTGTGATGCC+TGG | - | chr4_1:54948203-54948222 | Msa0556680:intron | 55.0% | |
| ATTGGGAAGACGCACAGGCA+TGG | + | chr4_1:54949018-54949037 | None:intergenic | 55.0% | |
| ! | GGAAACATCTGTACCGGCCA+TGG | + | chr4_1:54949276-54949295 | None:intergenic | 55.0% |
| CGTGAATGCGGGCAACACAT+AGG | + | chr4_1:54949480-54949499 | None:intergenic | 55.0% | |
| ATGTGTTGCCCGCATTCACG+TGG | - | chr4_1:54949480-54949499 | Msa0556680:intron | 55.0% | |
| GAGTTGTCGGAGACCGGTGA+AGG | + | chr4_1:54946411-54946430 | None:intergenic | 60.0% | |
| TTCGGCGAGTTGTCGGAGAC+CGG | + | chr4_1:54946417-54946436 | None:intergenic | 60.0% | |
| GGCGTGTTTCGGCGAGTTGT+CGG | + | chr4_1:54946424-54946443 | None:intergenic | 60.0% | |
| CGCCGAAACACGCCGTTTCA+AGG | - | chr4_1:54946430-54946449 | Msa0556680:three_prime_UTR | 60.0% | |
| GGGCTTGGACTTGCGAGTTG+TGG | - | chr4_1:54948007-54948026 | Msa0556680:intron | 60.0% | |
| GGCTCATGGGACTGAAGCCT+TGG | - | chr4_1:54948058-54948077 | Msa0556680:intron | 60.0% | |
| AAGTCAGCTGTGGCCATGGC+CGG | - | chr4_1:54949260-54949279 | Msa0556680:CDS | 60.0% | |
| ACGTCTCCCACCCGTCAACA+TGG | - | chr4_1:54949736-54949755 | Msa0556680:five_prime_UTR | 60.0% | |
| CAGTTCGGCGTCCTCCACGA+TGG | - | chr4_1:54946543-54946562 | Msa0556680:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 54946199 | 54949791 | 54946199 | ID=Msa0556680;Name=Msa0556680 |
| chr4_1 | mRNA | 54946199 | 54949791 | 54946199 | ID=Msa0556680-mRNA-1;Parent=Msa0556680;Name=Msa0556680-mRNA-1;_AED=0.10;_eAED=0.10;_QI=163|1|1|1|1|1|7|286|312 |
| chr4_1 | exon | 54946199 | 54946739 | 54946199 | ID=Msa0556680-mRNA-1:exon:16328;Parent=Msa0556680-mRNA-1 |
| chr4_1 | exon | 54947485 | 54947549 | 54947485 | ID=Msa0556680-mRNA-1:exon:16327;Parent=Msa0556680-mRNA-1 |
| chr4_1 | exon | 54947766 | 54947982 | 54947766 | ID=Msa0556680-mRNA-1:exon:16326;Parent=Msa0556680-mRNA-1 |
| chr4_1 | exon | 54948421 | 54948502 | 54948421 | ID=Msa0556680-mRNA-1:exon:16325;Parent=Msa0556680-mRNA-1 |
| chr4_1 | exon | 54949140 | 54949299 | 54949140 | ID=Msa0556680-mRNA-1:exon:16324;Parent=Msa0556680-mRNA-1 |
| chr4_1 | exon | 54949393 | 54949462 | 54949393 | ID=Msa0556680-mRNA-1:exon:16323;Parent=Msa0556680-mRNA-1 |
| chr4_1 | exon | 54949539 | 54949791 | 54949539 | ID=Msa0556680-mRNA-1:exon:16322;Parent=Msa0556680-mRNA-1 |
| chr4_1 | five_prime_UTR | 54949629 | 54949791 | 54949629 | ID=Msa0556680-mRNA-1:five_prime_utr;Parent=Msa0556680-mRNA-1 |
| chr4_1 | CDS | 54949539 | 54949628 | 54949539 | ID=Msa0556680-mRNA-1:cds;Parent=Msa0556680-mRNA-1 |
| chr4_1 | CDS | 54949393 | 54949462 | 54949393 | ID=Msa0556680-mRNA-1:cds;Parent=Msa0556680-mRNA-1 |
| chr4_1 | CDS | 54949140 | 54949299 | 54949140 | ID=Msa0556680-mRNA-1:cds;Parent=Msa0556680-mRNA-1 |
| chr4_1 | CDS | 54948421 | 54948502 | 54948421 | ID=Msa0556680-mRNA-1:cds;Parent=Msa0556680-mRNA-1 |
| chr4_1 | CDS | 54947766 | 54947982 | 54947766 | ID=Msa0556680-mRNA-1:cds;Parent=Msa0556680-mRNA-1 |
| chr4_1 | CDS | 54947485 | 54947549 | 54947485 | ID=Msa0556680-mRNA-1:cds;Parent=Msa0556680-mRNA-1 |
| chr4_1 | CDS | 54946485 | 54946739 | 54946485 | ID=Msa0556680-mRNA-1:cds;Parent=Msa0556680-mRNA-1 |
| chr4_1 | three_prime_UTR | 54946199 | 54946484 | 54946199 | ID=Msa0556680-mRNA-1:three_prime_utr;Parent=Msa0556680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
