Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563620 | XP_013446579.1 | 99.147 | 469 | 4 | 0 | 1 | 469 | 1 | 469 | 0.0 | 961 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563620 | sp|Q9ZUN8|HTD1_ARATH | 70.312 | 448 | 129 | 3 | 23 | 467 | 20 | 466 | 0.0 | 640 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563620 | A0A072TTT6 | 99.147 | 469 | 4 | 0 | 1 | 469 | 1 | 469 | 0.0 | 961 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0552720 | Msa0563620 | 0.848422 | 6.192547e-60 | -8.615850e-47 |
| Msa0562030 | Msa0563620 | 0.809997 | 1.434734e-50 | -8.615850e-47 |
| Msa0563620 | Msa0569240 | 0.820055 | 8.394776e-53 | -8.615850e-47 |
| Msa0563620 | Msa0575110 | 0.818184 | 2.238228e-52 | -8.615850e-47 |
| Msa0563620 | Msa0646960 | 0.825531 | 4.455172e-54 | -8.615850e-47 |
| Msa0563620 | Msa1105460 | 0.800357 | 1.496877e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563620 | MtrunA17_Chr8g0377441 | 99.147 | 469 | 4 | 0 | 1 | 469 | 1 | 469 | 0.0 | 961 |
| Msa0563620 | MtrunA17_Chr5g0406931 | 79.310 | 464 | 76 | 7 | 1 | 460 | 1 | 448 | 0.0 | 679 |
| Msa0563620 | MtrunA17_Chr4g0052291 | 28.934 | 394 | 214 | 12 | 52 | 428 | 29 | 373 | 4.69e-34 | 132 |
| Msa0563620 | MtrunA17_Chr2g0299271 | 30.218 | 321 | 182 | 10 | 155 | 450 | 151 | 454 | 6.63e-32 | 127 |
| Msa0563620 | MtrunA17_Chr4g0036951 | 30.100 | 299 | 174 | 9 | 157 | 450 | 109 | 377 | 6.65e-29 | 117 |
| Msa0563620 | MtrunA17_Chr2g0330271 | 27.246 | 334 | 185 | 12 | 155 | 450 | 110 | 423 | 1.32e-25 | 109 |
| Msa0563620 | MtrunA17_Chr2g0283891 | 25.974 | 231 | 144 | 8 | 216 | 432 | 99 | 316 | 2.13e-16 | 80.1 |
| Msa0563620 | MtrunA17_Chr1g0176241 | 33.766 | 154 | 91 | 6 | 236 | 389 | 339 | 481 | 1.41e-12 | 69.7 |
| Msa0563620 | MtrunA17_Chr5g0447911 | 34.127 | 126 | 72 | 3 | 269 | 391 | 250 | 367 | 9.60e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563620 | AT2G19540.1 | 70.312 | 448 | 129 | 3 | 23 | 467 | 20 | 466 | 0.0 | 640 |
| Msa0563620 | AT5G58230.1 | 31.013 | 316 | 173 | 8 | 126 | 428 | 90 | 373 | 8.88e-36 | 137 |
| Msa0563620 | AT2G16780.1 | 29.043 | 303 | 189 | 7 | 152 | 450 | 105 | 385 | 7.40e-34 | 132 |
| Msa0563620 | AT4G35050.1 | 28.383 | 303 | 191 | 7 | 152 | 450 | 106 | 386 | 2.11e-31 | 125 |
| Msa0563620 | AT2G19520.1 | 28.440 | 327 | 183 | 10 | 155 | 450 | 157 | 463 | 1.07e-27 | 115 |
| Msa0563620 | AT4G29730.1 | 27.950 | 322 | 181 | 10 | 155 | 445 | 137 | 438 | 1.00e-26 | 113 |
| Msa0563620 | AT4G29730.3 | 27.541 | 305 | 171 | 9 | 155 | 429 | 137 | 421 | 5.15e-25 | 107 |
| Msa0563620 | AT4G29730.2 | 27.541 | 305 | 171 | 9 | 155 | 429 | 137 | 421 | 5.15e-25 | 107 |
| Msa0563620 | AT1G29260.1 | 28.108 | 185 | 114 | 6 | 216 | 394 | 98 | 269 | 1.35e-14 | 75.1 |
| Msa0563620 | AT4G34460.4 | 25.824 | 182 | 131 | 3 | 215 | 393 | 141 | 321 | 3.52e-12 | 68.2 |
| Msa0563620 | AT4G34460.1 | 25.824 | 182 | 131 | 3 | 215 | 393 | 146 | 326 | 3.99e-12 | 68.2 |
| Msa0563620 | AT4G34460.3 | 25.824 | 182 | 131 | 3 | 215 | 393 | 146 | 326 | 4.25e-12 | 67.8 |
| Msa0563620 | AT4G34460.2 | 25.824 | 182 | 131 | 3 | 215 | 393 | 84 | 264 | 5.30e-12 | 67.0 |
Find 138 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAAAGTATCCAATATTTC+TGG | 0.186014 | 4_1:-64059030 | Msa0563620:CDS |
| CAGGAGCGTTTACTTGTTCT+TGG | 0.192683 | 4_1:+64055250 | None:intergenic |
| ATATTGGATGGCCTTGTCTT+AGG | 0.248468 | 4_1:-64060109 | Msa0563620:intron |
| AAACCTTCTTGGAATTCTAT+TGG | 0.254653 | 4_1:-64059057 | Msa0563620:CDS |
| CTGCCCAAGATGCACATATA+TGG | 0.270395 | 4_1:+64058723 | None:intergenic |
| GTACAAAAGCAAAATTTCTT+TGG | 0.285637 | 4_1:+64054612 | None:intergenic |
| TGGATAAAAGCATTGCAATA+TGG | 0.287928 | 4_1:-64056373 | Msa0563620:CDS |
| CACACAGTGTATTTCATTAC+AGG | 0.300493 | 4_1:-64059472 | Msa0563620:CDS |
| TGTGTGCCAATGCAGTTCTT+TGG | 0.305295 | 4_1:+64054847 | None:intergenic |
| CTTTGGCATAACTTAGATTC+AGG | 0.310531 | 4_1:+64054629 | None:intergenic |
| TGCAATATGGGATACTCGTT+TGG | 0.310651 | 4_1:-64056360 | Msa0563620:CDS |
| GTGTGCCAATGCAGTTCTTT+GGG | 0.311930 | 4_1:+64054848 | None:intergenic |
| AACCTTCTTGGAATTCTATT+GGG | 0.322573 | 4_1:-64059056 | Msa0563620:CDS |
| CAGAATATGGGACCTTTCTC+TGG | 0.326941 | 4_1:-64055313 | Msa0563620:CDS |
| GGCGGCGGCGCCACAGGTTC+CGG | 0.327760 | 4_1:-64060222 | Msa0563620:CDS |
| CTGTCAGTATGTCCAGTAAA+AGG | 0.330541 | 4_1:+64056577 | None:intergenic |
| AGTTGGGGAGGCAGATCTTC+AGG | 0.338811 | 4_1:+64055231 | None:intergenic |
| GACTGGAGTCCTCTTGTTCC+AGG | 0.347996 | 4_1:-64056792 | Msa0563620:CDS |
| GCAATATGGGATACTCGTTT+GGG | 0.354043 | 4_1:-64056359 | Msa0563620:CDS |
| TGCCGGTGGTCCTACTTTGC+AGG | 0.355683 | 4_1:-64058905 | Msa0563620:intron |
| ACGTCTCTTCCCAGAAATAT+TGG | 0.357236 | 4_1:+64059020 | None:intergenic |
| TTCGGCGGCGGCGGCGCCAC+AGG | 0.362085 | 4_1:-64060228 | Msa0563620:CDS |
| CCAAGGAGTTGATGCAGTTC+AGG | 0.373931 | 4_1:-64056859 | Msa0563620:CDS |
| CCCAGGCTGAGAAACCTTCT+TGG | 0.379293 | 4_1:-64059068 | Msa0563620:intron |
| CATTGGCACACACAGATTCC+TGG | 0.384701 | 4_1:-64054836 | Msa0563620:CDS |
| CTCACGAAGGTTGTATTAAC+CGG | 0.388862 | 4_1:-64058769 | Msa0563620:CDS |
| TGAAACTGATGACTCTGAAA+TGG | 0.392830 | 4_1:-64058980 | Msa0563620:CDS |
| ATCAACTCCTTGGACACCTT+CGG | 0.400128 | 4_1:+64056869 | None:intergenic |
| CCTGGTGAATAAACAATAGT+TGG | 0.407860 | 4_1:+64055214 | None:intergenic |
| TCGTGATCTCAGACTGCTTA+AGG | 0.409527 | 4_1:-64056135 | Msa0563620:intron |
| GAGTCATCAGTTTCACGTTT+AGG | 0.409980 | 4_1:+64058988 | None:intergenic |
| GGATAAAAGCATTGCAATAT+GGG | 0.421297 | 4_1:-64056372 | Msa0563620:CDS |
| TGCCCAAGATGCACATATAT+GGG | 0.425064 | 4_1:+64058724 | None:intergenic |
| CTGGTGAATAAACAATAGTT+GGG | 0.426771 | 4_1:+64055215 | None:intergenic |
| TGTGCATCTTGGGCAGAATC+TGG | 0.430129 | 4_1:-64058716 | Msa0563620:CDS |
| GGCTAGTTGTATGTTGGCGT+CGG | 0.431422 | 4_1:-64056183 | Msa0563620:CDS |
| TCCCCATATATGTGCATCTT+GGG | 0.431645 | 4_1:-64058726 | Msa0563620:CDS |
| AGGAGCGTTTACTTGTTCTT+GGG | 0.432127 | 4_1:+64055251 | None:intergenic |
| TTTGTGCCATGGAGCGTATC+CGG | 0.432906 | 4_1:+64058750 | None:intergenic |
| TGAATCATCTTCGGCGGCGG+CGG | 0.433527 | 4_1:-64060237 | Msa0563620:CDS |
| GCAGTACATACTATCATTCC+AGG | 0.440018 | 4_1:+64054818 | None:intergenic |
| TTAAAGTATCCAATATTTCT+GGG | 0.447355 | 4_1:-64059029 | Msa0563620:CDS |
| TCCACACGAAGCTTCTTCAT+TGG | 0.452856 | 4_1:-64055572 | Msa0563620:CDS |
| AACTAGGTTACGCAGATTGT+AGG | 0.460202 | 4_1:+64060607 | None:intergenic |
| ATCCCCATATATGTGCATCT+TGG | 0.460743 | 4_1:-64058727 | Msa0563620:CDS |
| CCTGAACTGCATCAACTCCT+TGG | 0.464940 | 4_1:+64056859 | None:intergenic |
| CCAACTATTGTTTATTCACC+AGG | 0.472482 | 4_1:-64055214 | Msa0563620:intron |
| TGGATGTGATTGGATGCTTA+TGG | 0.478480 | 4_1:+64055605 | None:intergenic |
| AAAGTTAGCACAAGCAGATA+AGG | 0.486028 | 4_1:+64054550 | None:intergenic |
| ATGGGACCTTTCTCTGGAAA+AGG | 0.488099 | 4_1:-64055307 | Msa0563620:CDS |
| GCTAGTTGTATGTTGGCGTC+GGG | 0.490510 | 4_1:-64056182 | Msa0563620:CDS |
| AAGGTGCTTTGAATATTTGA+AGG | 0.491981 | 4_1:+64054770 | None:intergenic |
| TTGGCGTCGGGTAGTGATGA+TGG | 0.493276 | 4_1:-64056170 | Msa0563620:CDS |
| TACAAGGCAGTATCTGCTAT+AGG | 0.495721 | 4_1:-64054696 | Msa0563620:three_prime_UTR |
| ATGAAGGCTATGCTATAGAC+TGG | 0.496426 | 4_1:-64056809 | Msa0563620:CDS |
| CCGGTAAAAGTGTGGCAACC+TGG | 0.501960 | 4_1:-64060203 | Msa0563620:CDS |
| ACCTGTGAGTGGCTTGTTGT+TGG | 0.504353 | 4_1:+64060567 | None:intergenic |
| TGAATGTATTGTCATGGAAC+AGG | 0.507712 | 4_1:-64056295 | Msa0563620:intron |
| AATCCTTTGCCACAGAATAT+GGG | 0.508159 | 4_1:-64055325 | Msa0563620:intron |
| TCTGGAAAAGGACGAGGAAG+AGG | 0.509921 | 4_1:-64055295 | Msa0563620:CDS |
| CTCCACTCAATGGATGTGAT+TGG | 0.514101 | 4_1:+64055595 | None:intergenic |
| GTTCCAGGGAGGCTTGTATC+CGG | 0.514187 | 4_1:-64056777 | Msa0563620:intron |
| ATAGCAGATACTGCCTTGTA+AGG | 0.517707 | 4_1:+64054699 | None:intergenic |
| GCAGATAAGGAAATTAATAG+AGG | 0.518815 | 4_1:+64054563 | None:intergenic |
| GGCAGAATCTGGTCATGTGC+AGG | 0.520350 | 4_1:-64058705 | Msa0563620:intron |
| TCTGAGATCACGAATAGATA+TGG | 0.521643 | 4_1:+64056145 | None:intergenic |
| GACGAAGAAGGTGGTGGTGC+CGG | 0.523908 | 4_1:-64058922 | Msa0563620:CDS |
| TTCTGGGAAGAGACGTGAGC+TGG | 0.529788 | 4_1:-64059013 | Msa0563620:CDS |
| GAAACGGAGTGAATCATCTT+CGG | 0.530490 | 4_1:-64060246 | Msa0563620:CDS |
| CGGCATAAAACATCGTCAAA+AGG | 0.531323 | 4_1:-64060393 | Msa0563620:CDS |
| GAGGGTGTTACCTGCAAAGT+AGG | 0.537218 | 4_1:+64058895 | None:intergenic |
| GCAACCTGGTGTGGATAAGT+TGG | 0.537432 | 4_1:-64060189 | Msa0563620:CDS |
| ACAGAAACCGAAGGTGTCCA+AGG | 0.538288 | 4_1:-64056876 | Msa0563620:CDS |
| CAATAATAGTATTTATCTGT+GGG | 0.539902 | 4_1:-64056638 | Msa0563620:CDS |
| TTACCGGATACAAGCCTCCC+TGG | 0.543277 | 4_1:+64056774 | None:intergenic |
| ACTAGGTTACGCAGATTGTA+GGG | 0.543807 | 4_1:+64060608 | None:intergenic |
| AAATTTAAGCACAAAGATGA+AGG | 0.546613 | 4_1:-64056825 | Msa0563620:CDS |
| TGAAGAGAATTGTAAGCAGA+AGG | 0.551356 | 4_1:+64060140 | None:intergenic |
| TTCGTGTGGACTCCACTCAA+TGG | 0.553277 | 4_1:+64055585 | None:intergenic |
| GAGTGAATCATCTTCGGCGG+CGG | 0.557113 | 4_1:-64060240 | Msa0563620:CDS |
| CCTTTCTCTGGAAAAGGACG+AGG | 0.557117 | 4_1:-64055301 | Msa0563620:CDS |
| GCAATAATAGTATTTATCTG+TGG | 0.558281 | 4_1:-64056639 | Msa0563620:CDS |
| ATAGTATGTACTGCAGCAGA+TGG | 0.561830 | 4_1:-64054809 | Msa0563620:CDS |
| TTCCATGTTGCAGCAGATGT+AGG | 0.568203 | 4_1:+64056613 | None:intergenic |
| ACAAGCCTCCCTGGAACAAG+AGG | 0.572225 | 4_1:+64056783 | None:intergenic |
| ATCCCAATAGAATTCCAAGA+AGG | 0.572795 | 4_1:+64059054 | None:intergenic |
| TGTGCTTGAAAAGACGCAGC+TGG | 0.573745 | 4_1:+64056329 | None:intergenic |
| AAGACCCCAAAGAACTGCAT+TGG | 0.573867 | 4_1:-64054853 | Msa0563620:CDS |
| TAGGTTGGCTAGTTGTATGT+TGG | 0.574859 | 4_1:-64056189 | Msa0563620:CDS |
| GGCATAACTTAGATTCAGGA+TGG | 0.577023 | 4_1:+64054633 | None:intergenic |
| TTTGAATATTTGAAGGCATG+AGG | 0.577378 | 4_1:+64054777 | None:intergenic |
| GAAGAAGGTGGTGGTGCCGG+TGG | 0.577725 | 4_1:-64058919 | Msa0563620:CDS |
| ACCAACAACAAGCCACTCAC+AGG | 0.580280 | 4_1:-64060568 | Msa0563620:intron |
| TCTTCCAACTTATCCACACC+AGG | 0.583170 | 4_1:+64060185 | None:intergenic |
| TGTGCCAATGCAGTTCTTTG+GGG | 0.585321 | 4_1:+64054849 | None:intergenic |
| GGAAAAGGACGAGGAAGAGG+AGG | 0.586131 | 4_1:-64055292 | Msa0563620:CDS |
| AGCCTACATCTGCTGCAACA+TGG | 0.586634 | 4_1:-64056615 | Msa0563620:CDS |
| GACGGAGAAGAGAGAGAACT+AGG | 0.586818 | 4_1:+64060591 | None:intergenic |
| TTCTGTTCGAACTAAACCCA+TGG | 0.588801 | 4_1:+64059501 | None:intergenic |
| AAAAGTGTGGCAACCTGGTG+TGG | 0.591077 | 4_1:-64060198 | Msa0563620:CDS |
| GATGATAGTGAAGACGAAGA+AGG | 0.598598 | 4_1:-64058934 | Msa0563620:CDS |
| GTATTTCATTACAGGGACAC+AGG | 0.601861 | 4_1:-64059464 | Msa0563620:intron |
| GAGTGGCTTGTTGTTGGTGA+CGG | 0.602232 | 4_1:+64060573 | None:intergenic |
| CTGATGTGAATGTATTGTCA+TGG | 0.604527 | 4_1:-64056301 | Msa0563620:CDS |
| TACCTGCAAAGTAGGACCAC+CGG | 0.605560 | 4_1:+64058903 | None:intergenic |
| TTACGTAAGTTGATTATCAG+CGG | 0.605575 | 4_1:+64055540 | None:intergenic |
| TGGCGTCGGGTAGTGATGAT+GGG | 0.605656 | 4_1:-64056169 | Msa0563620:CDS |
| TATTAACCGGATACGCTCCA+TGG | 0.608736 | 4_1:-64058756 | Msa0563620:CDS |
| ACACAGTGTATTTCATTACA+GGG | 0.609707 | 4_1:-64059471 | Msa0563620:CDS |
| ACTGATGACTCTGAAATGGA+TGG | 0.615606 | 4_1:-64058976 | Msa0563620:CDS |
| GATAGTGAAGACGAAGAAGG+TGG | 0.618214 | 4_1:-64058931 | Msa0563620:CDS |
| CACAGGTTCCGGTAAAAGTG+TGG | 0.622299 | 4_1:-64060211 | Msa0563620:CDS |
| ACCTTTGACAAACCTGTGAG+TGG | 0.623381 | 4_1:+64060556 | None:intergenic |
| ACTGGAGTCCTCTTGTTCCA+GGG | 0.624385 | 4_1:-64056791 | Msa0563620:CDS |
| GCAGATACTGCCTTGTAAGG+TGG | 0.628414 | 4_1:+64054702 | None:intergenic |
| GTATTCAAAATGCGCTACCA+CGG | 0.630470 | 4_1:+64055627 | None:intergenic |
| TGAATAAACAATAGTTGGGG+AGG | 0.631441 | 4_1:+64055219 | None:intergenic |
| AAAGGCAAAGAGCAAGAACA+AGG | 0.634436 | 4_1:-64060375 | Msa0563620:intron |
| ATCCAATCACATCCATTGAG+TGG | 0.634447 | 4_1:-64055597 | Msa0563620:CDS |
| GGAGTCCTCTTGTTCCAGGG+AGG | 0.636093 | 4_1:-64056788 | Msa0563620:CDS |
| TCATGCAGCTTCTGATGGCA+AGG | 0.636729 | 4_1:+64054751 | None:intergenic |
| TGACTCTGAAATGGATGGTG+AGG | 0.638725 | 4_1:-64058971 | Msa0563620:CDS |
| GCCAATGAAGAAGCTTCGTG+TGG | 0.638913 | 4_1:+64055571 | None:intergenic |
| TGAATAGGAAGGAGATTCCG+TGG | 0.641695 | 4_1:-64055644 | Msa0563620:intron |
| GTGTATCATGCAGCTTCTGA+TGG | 0.643240 | 4_1:+64054746 | None:intergenic |
| AGTGAAGACGAAGAAGGTGG+TGG | 0.649130 | 4_1:-64058928 | Msa0563620:CDS |
| TGGTGAGGATAGTGATAGCG+AGG | 0.651927 | 4_1:-64058956 | Msa0563620:CDS |
| GTAATGAAATACACTGTGTG+TGG | 0.652047 | 4_1:+64059475 | None:intergenic |
| GCCCAAGATGCACATATATG+GGG | 0.653392 | 4_1:+64058725 | None:intergenic |
| TTCACACCTACAGTTGCGGA+AGG | 0.659965 | 4_1:-64058795 | Msa0563620:intron |
| AACTAATTGAAGATGACTCG+CGG | 0.660356 | 4_1:-64060413 | Msa0563620:exon |
| TTTGTTCTTTACCTAAGACA+AGG | 0.662595 | 4_1:+64060098 | None:intergenic |
| TGGTGAATAAACAATAGTTG+GGG | 0.666731 | 4_1:+64055216 | None:intergenic |
| ACGGAGTGAATCATCTTCGG+CGG | 0.677615 | 4_1:-64060243 | Msa0563620:CDS |
| CAATATGGGATACTCGTTTG+GGG | 0.693736 | 4_1:-64056358 | Msa0563620:CDS |
| TATGGGATACTCGTTTGGGG+AGG | 0.701784 | 4_1:-64056355 | Msa0563620:CDS |
| CTAGCAGAGACAGAAACCGA+AGG | 0.703665 | 4_1:-64056885 | Msa0563620:CDS |
| TTGCGGAAGGTAACTCACGA+AGG | 0.747550 | 4_1:-64058782 | Msa0563620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAAATATATCTAATCA+AGG | + | chr4_1:64060112-64060131 | None:intergenic | 10.0% |
| !!! | TTTTGAAAAAATTGAAGAAA+CGG | - | chr4_1:64054761-64054780 | Msa0563620:CDS | 15.0% |
| !!! | TCATGATTTATTTTTTGTTT+GGG | - | chr4_1:64055468-64055487 | Msa0563620:intron | 15.0% |
| !! | AATACAAAAACTAAATCATA+GGG | + | chr4_1:64056357-64056376 | None:intergenic | 15.0% |
| !! | AAATACAAAAACTAAATCAT+AGG | + | chr4_1:64056358-64056377 | None:intergenic | 15.0% |
| !! | GTTATGTTAAAATCAAATAT+AGG | + | chr4_1:64056581-64056600 | None:intergenic | 15.0% |
| !! | ATTTCAAAGATTAACTTATA+AGG | + | chr4_1:64057530-64057549 | None:intergenic | 15.0% |
| !!! | ATAAGTTAATCTTTGAAATA+TGG | - | chr4_1:64057531-64057550 | Msa0563620:intron | 15.0% |
| !! | AATATTATCTATACTAATGT+TGG | + | chr4_1:64057630-64057649 | None:intergenic | 15.0% |
| !!! | CAACATATTGAAATTTTTTA+AGG | - | chr4_1:64057934-64057953 | Msa0563620:intron | 15.0% |
| !! | AATAACAAAAACAAAATAGT+CGG | + | chr4_1:64059331-64059350 | None:intergenic | 15.0% |
| !!! | AAGTTCATTATTTTTTGAAT+AGG | - | chr4_1:64059364-64059383 | Msa0563620:intron | 15.0% |
| !!! | GATAATATTTCTGATTCATT+TGG | - | chr4_1:64054563-64054582 | Msa0563620:three_prime_UTR | 20.0% |
| !!! | ATTCTGCTTTTATTTTTTGT+GGG | - | chr4_1:64054718-64054737 | Msa0563620:three_prime_UTR | 20.0% |
| !!! | GTCATGATTTATTTTTTGTT+TGG | - | chr4_1:64055467-64055486 | Msa0563620:intron | 20.0% |
| !!! | CATGATTTATTTTTTGTTTG+GGG | - | chr4_1:64055469-64055488 | Msa0563620:intron | 20.0% |
| !!! | TAGAATTTTTTGTCCTTTAA+TGG | - | chr4_1:64055716-64055735 | Msa0563620:intron | 20.0% |
| !!! | TTTAAAGTATCCAATATTTC+TGG | - | chr4_1:64055993-64056012 | Msa0563620:intron | 20.0% |
| !!! | TTAAAGTATCCAATATTTCT+GGG | - | chr4_1:64055994-64056013 | Msa0563620:intron | 20.0% |
| !! | AGTAAAAATTCATATGAAGA+GGG | + | chr4_1:64056149-64056168 | None:intergenic | 20.0% |
| !! | AAGTAAAAATTCATATGAAG+AGG | + | chr4_1:64056150-64056169 | None:intergenic | 20.0% |
| !!! | ATGTGTTGTTATAAGTTAAA+AGG | + | chr4_1:64056496-64056515 | None:intergenic | 20.0% |
| !!! | TATTGATACATGTTCTAAAA+GGG | + | chr4_1:64056623-64056642 | None:intergenic | 20.0% |
| !!! | TTATTGATACATGTTCTAAA+AGG | + | chr4_1:64056624-64056643 | None:intergenic | 20.0% |
| !!! | GAGTTAATTTTTTTAATCGA+CGG | - | chr4_1:64056737-64056756 | Msa0563620:intron | 20.0% |
| !! | TGTGAAACATATGTATAAAA+TGG | - | chr4_1:64057494-64057513 | Msa0563620:intron | 20.0% |
| !! | TATAGTACTAAACAAACTAT+GGG | + | chr4_1:64057557-64057576 | None:intergenic | 20.0% |
| !! | TTATAGTACTAAACAAACTA+TGG | + | chr4_1:64057558-64057577 | None:intergenic | 20.0% |
| !!! | TAGTATAGATAATATTTCTG+CGG | - | chr4_1:64057634-64057653 | Msa0563620:intron | 20.0% |
| !!! | TTAAGGTTCTTAAATTTTAG+CGG | - | chr4_1:64057951-64057970 | Msa0563620:intron | 20.0% |
| !! | TTGAACAAAAATATACAACT+CGG | + | chr4_1:64058061-64058080 | None:intergenic | 20.0% |
| !! | CAATAATAGTATTTATCTGT+GGG | - | chr4_1:64058385-64058404 | Msa0563620:intron | 20.0% |
| !!! | AGAAAGTTTACAATTTTGTA+TGG | + | chr4_1:64058952-64058971 | None:intergenic | 20.0% |
| !! | TAATGATGTAATATGCTATT+AGG | + | chr4_1:64059117-64059136 | None:intergenic | 20.0% |
| !!! | TCATTATTTTTTGAATAGGA+AGG | - | chr4_1:64059368-64059387 | Msa0563620:intron | 20.0% |
| !! | ATAAATCCCTGAAATTTATT+AGG | + | chr4_1:64059561-64059580 | None:intergenic | 20.0% |
| !! | AATCCAAAGTAAGAAAAATA+AGG | + | chr4_1:64059664-64059683 | None:intergenic | 20.0% |
| !!! | CATTTTTCTTTCAAGTATTT+GGG | + | chr4_1:64060630-64060649 | None:intergenic | 20.0% |
| !!! | TCATTTTTCTTTCAAGTATT+TGG | + | chr4_1:64060631-64060650 | None:intergenic | 20.0% |
| !! | AAATACTTGAAAGAAAAATG+AGG | - | chr4_1:64060630-64060649 | Msa0563620:five_prime_UTR | 20.0% |
| ! | AATGAAGTACGACATTAAAA+GGG | + | chr4_1:64054701-64054720 | None:intergenic | 25.0% |
| !!! | CATTCTGCTTTTATTTTTTG+TGG | - | chr4_1:64054717-64054736 | Msa0563620:three_prime_UTR | 25.0% |
| !!! | AATAAAACCCATTATTTTGC+TGG | - | chr4_1:64054979-64054998 | Msa0563620:intron | 25.0% |
| ! | ATAATTCAATGTAGTCACTT+GGG | - | chr4_1:64055153-64055172 | Msa0563620:intron | 25.0% |
| ! | AAGAATTATGACATTGTGAT+TGG | - | chr4_1:64055260-64055279 | Msa0563620:CDS | 25.0% |
| !! | TCTTGTGTGTTTTCTTTTAT+AGG | - | chr4_1:64055597-64055616 | Msa0563620:CDS | 25.0% |
| ! | AAAACTCAAAAGTCCATTAA+AGG | + | chr4_1:64055732-64055751 | None:intergenic | 25.0% |
| !! | TTTTGTATTTGTAGTGAACT+TGG | - | chr4_1:64056368-64056387 | Msa0563620:CDS | 25.0% |
| ! | TTGTGAAAATTCATGTGATA+TGG | - | chr4_1:64056419-64056438 | Msa0563620:intron | 25.0% |
| !! | TTAAACTATGAGCAACTTTT+TGG | + | chr4_1:64056790-64056809 | None:intergenic | 25.0% |
| !! | CATTTTTCATACTATGTTAG+TGG | - | chr4_1:64056823-64056842 | Msa0563620:CDS | 25.0% |
| !!! | TTGAACCAAGTTATTTCTAT+TGG | - | chr4_1:64056972-64056991 | Msa0563620:intron | 25.0% |
| !!! | TTTTTCTTGTTTCAATGTTG+TGG | - | chr4_1:64057005-64057024 | Msa0563620:intron | 25.0% |
| ! | TCAAAATGACAAAATATGTG+TGG | + | chr4_1:64057342-64057361 | None:intergenic | 25.0% |
| ! | TAGAATGTATAAGATTGAAG+TGG | - | chr4_1:64057386-64057405 | Msa0563620:intron | 25.0% |
| ! | TTTAGTTACATGATTGTAGT+TGG | - | chr4_1:64057419-64057438 | Msa0563620:intron | 25.0% |
| !!! | GGACTTTATTGTTTTTGTTA+TGG | - | chr4_1:64057440-64057459 | Msa0563620:intron | 25.0% |
| ! | TTATCTATACTAATGTTGGT+AGG | + | chr4_1:64057626-64057645 | None:intergenic | 25.0% |
| ! | CGTAATAAATTTGTAGATCT+GGG | - | chr4_1:64058092-64058111 | Msa0563620:intron | 25.0% |
| !! | TTGTGCTTAAATTTTTGTAG+TGG | + | chr4_1:64058192-64058211 | None:intergenic | 25.0% |
| ! | AAATTTAAGCACAAAGATGA+AGG | - | chr4_1:64058198-64058217 | Msa0563620:intron | 25.0% |
| ! | TCATTGTCAAAGTAGATATA+AGG | - | chr4_1:64058329-64058348 | Msa0563620:intron | 25.0% |
| ! | GCAATAATAGTATTTATCTG+TGG | - | chr4_1:64058384-64058403 | Msa0563620:intron | 25.0% |
| !! | ATTGAAAAAACTCCTTTTAC+TGG | - | chr4_1:64058434-64058453 | Msa0563620:intron | 25.0% |
| ! | TAGAATGAAAATTGAGTAGA+TGG | + | chr4_1:64058778-64058797 | None:intergenic | 25.0% |
| ! | AATGAAATACAACAGATATG+AGG | + | chr4_1:64058806-64058825 | None:intergenic | 25.0% |
| ! | AAACAGCAAAATTACTGTAT+AGG | - | chr4_1:64058983-64059002 | Msa0563620:CDS | 25.0% |
| !! | AGGAACTTTTTATCAGAAAA+TGG | + | chr4_1:64059089-64059108 | None:intergenic | 25.0% |
| ! | TAATATGCTATTAGGACATA+AGG | + | chr4_1:64059109-64059128 | None:intergenic | 25.0% |
| ! | TCAACTTACGTAAGTAAATA+CGG | - | chr4_1:64059493-64059512 | Msa0563620:CDS | 25.0% |
| ! | ACGAATTCCTAATAAATTTC+AGG | - | chr4_1:64059551-64059570 | Msa0563620:intron | 25.0% |
| ! | CGAATTCCTAATAAATTTCA+GGG | - | chr4_1:64059552-64059571 | Msa0563620:intron | 25.0% |
| ! | TGTTTCTCTCATATTATCTT+TGG | - | chr4_1:64059583-64059602 | Msa0563620:intron | 25.0% |
| ! | GTTTCTCTCATATTATCTTT+GGG | - | chr4_1:64059584-64059603 | Msa0563620:intron | 25.0% |
| !! | AGCTTTTGTATAATGAAAGA+AGG | + | chr4_1:64060051-64060070 | None:intergenic | 25.0% |
| ! | TACAAGTTAAAGGAAATAAG+AGG | + | chr4_1:64060139-64060158 | None:intergenic | 25.0% |
| !!! | TATTTCCTTTAACTTGTAAC+AGG | - | chr4_1:64060141-64060160 | Msa0563620:CDS | 25.0% |
| !!! | ATTTCCTTTAACTTGTAACA+GGG | - | chr4_1:64060142-64060161 | Msa0563620:CDS | 25.0% |
| !!! | TAGGTATTGCTATTTTAGTT+TGG | - | chr4_1:64060346-64060365 | Msa0563620:intron | 25.0% |
| ! | GTACAAAAGCAAAATTTCTT+TGG | + | chr4_1:64060414-64060433 | None:intergenic | 25.0% |
| ! | TGTAGGGTTTTTACGTTTTA+GGG | + | chr4_1:64054402-64054421 | None:intergenic | 30.0% |
| ! | TTGTAGGGTTTTTACGTTTT+AGG | + | chr4_1:64054403-64054422 | None:intergenic | 30.0% |
| ATGAAGTACGACATTAAAAG+GGG | + | chr4_1:64054700-64054719 | None:intergenic | 30.0% | |
| GAATGAAGTACGACATTAAA+AGG | + | chr4_1:64054702-64054721 | None:intergenic | 30.0% | |
| ! | TCTCTTCATGCTTTTCATAT+TGG | - | chr4_1:64054898-64054917 | Msa0563620:intron | 30.0% |
| ! | TTCATGCTTTTCATATTGGA+TGG | - | chr4_1:64054902-64054921 | Msa0563620:intron | 30.0% |
| TTTGTTCTTTACCTAAGACA+AGG | + | chr4_1:64054928-64054947 | None:intergenic | 30.0% | |
| GATAACTCCAGCAAAATAAT+GGG | + | chr4_1:64054989-64055008 | None:intergenic | 30.0% | |
| TGATAACTCCAGCAAAATAA+TGG | + | chr4_1:64054990-64055009 | None:intergenic | 30.0% | |
| CATAATTCAATGTAGTCACT+TGG | - | chr4_1:64055152-64055171 | Msa0563620:intron | 30.0% | |
| TGTCATAATTCTTGTGAAAG+AGG | + | chr4_1:64055253-64055272 | None:intergenic | 30.0% | |
| ! | TGACATAGAATTGGTAACAT+TGG | + | chr4_1:64055286-64055305 | None:intergenic | 30.0% |
| ACACAGTGTATTTCATTACA+GGG | - | chr4_1:64055552-64055571 | Msa0563620:CDS | 30.0% | |
| ACTGTTCATTACCAATCAAA+TGG | - | chr4_1:64055649-64055668 | Msa0563620:intron | 30.0% | |
| CTGTTCATTACCAATCAAAT+GGG | - | chr4_1:64055650-64055669 | Msa0563620:intron | 30.0% | |
| TGTTCATTACCAATCAAATG+GGG | - | chr4_1:64055651-64055670 | Msa0563620:intron | 30.0% | |
| !! | GTAACGGAAAAGTTGATATT+GGG | - | chr4_1:64055673-64055692 | Msa0563620:intron | 30.0% |
| AAAGCTAGTAAAACATGACT+AGG | + | chr4_1:64055879-64055898 | None:intergenic | 30.0% | |
| AAACCTTCTTGGAATTCTAT+TGG | - | chr4_1:64055966-64055985 | Msa0563620:intron | 30.0% | |
| AACCTTCTTGGAATTCTATT+GGG | - | chr4_1:64055967-64055986 | Msa0563620:intron | 30.0% | |
| ! | AGTTGATCTTACTGACATTT+TGG | - | chr4_1:64056200-64056219 | Msa0563620:intron | 30.0% |
| TTATAACAACACATGTCAGT+TGG | - | chr4_1:64056502-64056521 | Msa0563620:intron | 30.0% | |
| TATAACAACACATGTCAGTT+GGG | - | chr4_1:64056503-64056522 | Msa0563620:intron | 30.0% | |
| TCTGTTCAACTATTATGTGT+AGG | - | chr4_1:64056552-64056571 | Msa0563620:intron | 30.0% | |
| GCTTTAACCAAACATTTACT+TGG | + | chr4_1:64056704-64056723 | None:intergenic | 30.0% | |
| GTAGAAAATGAGCCATTATT+TGG | - | chr4_1:64056847-64056866 | Msa0563620:CDS | 30.0% | |
| CTGATCCAATAGAAATAACT+TGG | + | chr4_1:64056980-64056999 | None:intergenic | 30.0% | |
| !! | AGTTATTTCTATTGGATCAG+AGG | - | chr4_1:64056980-64056999 | Msa0563620:intron | 30.0% |
| !! | GTTATTTCTATTGGATCAGA+GGG | - | chr4_1:64056981-64057000 | Msa0563620:intron | 30.0% |
| !!! | TGAATGTTGTTATTTTGCCA+TGG | - | chr4_1:64057122-64057141 | Msa0563620:intron | 30.0% |
| !!! | GAATGTTGTTATTTTGCCAT+GGG | - | chr4_1:64057123-64057142 | Msa0563620:intron | 30.0% |
| CTTAGTAGAACATTGTCAAA+GGG | + | chr4_1:64057182-64057201 | None:intergenic | 30.0% | |
| TCTTAGTAGAACATTGTCAA+AGG | + | chr4_1:64057183-64057202 | None:intergenic | 30.0% | |
| AGTCATTCAACTGTTAATGT+GGG | + | chr4_1:64057229-64057248 | None:intergenic | 30.0% | |
| TTTCACAATTAATGTCTGCA+TGG | + | chr4_1:64057481-64057500 | None:intergenic | 30.0% | |
| !! | ATACTAGCTTTGAACTTTGT+CGG | + | chr4_1:64057688-64057707 | None:intergenic | 30.0% |
| !! | AGTATCTCGTTTGATTTGAT+AGG | - | chr4_1:64057703-64057722 | Msa0563620:intron | 30.0% |
| AGGATAAATTATTCTGTTCC+AGG | - | chr4_1:64057723-64057742 | Msa0563620:intron | 30.0% | |
| ATGTTGCAATTGCAATACTT+AGG | + | chr4_1:64057788-64057807 | None:intergenic | 30.0% | |
| !! | AGTATCTCGTTTGATTTGAT+AGG | - | chr4_1:64057703-64057722 | Msa0563620:intron | 30.0% |
| AGGATAAATTATTCTGTTCC+AGG | - | chr4_1:64057723-64057742 | Msa0563620:intron | 30.0% | |
| ATGTTGCAATTGCAATACTT+AGG | + | chr4_1:64057788-64057807 | None:intergenic | 30.0% | |
| ACTTCTTTGATAGAAAGAGA+TGG | + | chr4_1:64058018-64058037 | None:intergenic | 30.0% | |
| GCGTAATAAATTTGTAGATC+TGG | - | chr4_1:64058091-64058110 | Msa0563620:intron | 30.0% | |
| AAAATAAGCCCAATGATTAC+CGG | + | chr4_1:64058268-64058287 | None:intergenic | 30.0% | |
| ATGTTGATCTTCATGTTTGT+AGG | - | chr4_1:64058356-64058375 | Msa0563620:intron | 30.0% | |
| TGTTGATCTTCATGTTTGTA+GGG | - | chr4_1:64058357-64058376 | Msa0563620:intron | 30.0% | |
| ! | TATTGCAATGCTTTTATCCA+CGG | + | chr4_1:64058650-64058669 | None:intergenic | 30.0% |
| !! | TGGATAAAAGCATTGCAATA+TGG | - | chr4_1:64058650-64058669 | Msa0563620:intron | 30.0% |
| !! | GGATAAAAGCATTGCAATAT+GGG | - | chr4_1:64058651-64058670 | Msa0563620:intron | 30.0% |
| TGTATTTCATTGTACTGAGT+AGG | - | chr4_1:64058815-64058834 | Msa0563620:intron | 30.0% | |
| ! | GTTTTTCTATATGAGCAAAG+GGG | + | chr4_1:64058930-64058949 | None:intergenic | 30.0% |
| ! | GGTTTTTCTATATGAGCAAA+GGG | + | chr4_1:64058931-64058950 | None:intergenic | 30.0% |
| ! | TGGTTTTTCTATATGAGCAA+AGG | + | chr4_1:64058932-64058951 | None:intergenic | 30.0% |
| GATGCTTTAATTGTCTTATC+TGG | - | chr4_1:64059060-64059079 | Msa0563620:CDS | 30.0% | |
| TCCTTCAAAAATGCATTTCT+GGG | + | chr4_1:64059226-64059245 | None:intergenic | 30.0% | |
| TTCCTTCAAAAATGCATTTC+TGG | + | chr4_1:64059227-64059246 | None:intergenic | 30.0% | |
| AACAAAAACAAAATAGTCGG+CGG | + | chr4_1:64059328-64059347 | None:intergenic | 30.0% | |
| !! | TTACGTAAGTTGATTATCAG+CGG | + | chr4_1:64059486-64059505 | None:intergenic | 30.0% |
| GTAAGAAAAATAAGGCAGTT+TGG | + | chr4_1:64059656-64059675 | None:intergenic | 30.0% | |
| !!! | CTGCCTTATTTTTCTTACTT+TGG | - | chr4_1:64059658-64059677 | Msa0563620:intron | 30.0% |
| TGGTGAATAAACAATAGTTG+GGG | + | chr4_1:64059810-64059829 | None:intergenic | 30.0% | |
| CTGGTGAATAAACAATAGTT+GGG | + | chr4_1:64059811-64059830 | None:intergenic | 30.0% | |
| AACCTAGCTTATACTCAAAT+AGG | + | chr4_1:64059980-64059999 | None:intergenic | 30.0% | |
| ! | TTTGAATATTTGAAGGCATG+AGG | + | chr4_1:64060249-64060268 | None:intergenic | 30.0% |
| ! | AAGGTGCTTTGAATATTTGA+AGG | + | chr4_1:64060256-64060275 | None:intergenic | 30.0% |
| !!! | TTGCTATTTTAGTTTGGACA+AGG | - | chr4_1:64060352-64060371 | Msa0563620:intron | 30.0% |
| GCAGATAAGGAAATTAATAG+AGG | + | chr4_1:64060463-64060482 | None:intergenic | 30.0% | |
| ! | GTAGGGTTTTTACGTTTTAG+GGG | + | chr4_1:64054401-64054420 | None:intergenic | 35.0% |
| AACTAATTGAAGATGACTCG+CGG | - | chr4_1:64054610-64054629 | Msa0563620:three_prime_UTR | 35.0% | |
| TGAAGAGAATTGTAAGCAGA+AGG | + | chr4_1:64054886-64054905 | None:intergenic | 35.0% | |
| CTGGAGTTATCACTGTTAAA+TGG | - | chr4_1:64054998-64055017 | Msa0563620:intron | 35.0% | |
| TCATAGCTCTTGAATTGCAA+TGG | + | chr4_1:64055066-64055085 | None:intergenic | 35.0% | |
| ! | TGACATAGAATTGGTGACAT+TGG | - | chr4_1:64055187-64055206 | Msa0563620:intron | 35.0% |
| ! | ATTGGTGACATTGGTAACAT+TGG | - | chr4_1:64055196-64055215 | Msa0563620:intron | 35.0% |
| AAGCAAACGCACAAAAATTG+TGG | + | chr4_1:64055415-64055434 | None:intergenic | 35.0% | |
| ! | GATATTTTACGTGACACCAT+GGG | - | chr4_1:64055506-64055525 | Msa0563620:intron | 35.0% |
| GTAATGAAATACACTGTGTG+TGG | + | chr4_1:64055551-64055570 | None:intergenic | 35.0% | |
| CACACAGTGTATTTCATTAC+AGG | - | chr4_1:64055551-64055570 | Msa0563620:CDS | 35.0% | |
| TGTCTCATGAATCATCTTGA+AGG | - | chr4_1:64055621-64055640 | Msa0563620:CDS | 35.0% | |
| TTACCAATCAAATGGGGTAA+CGG | - | chr4_1:64055657-64055676 | Msa0563620:intron | 35.0% | |
| !! | GGTAACGGAAAAGTTGATAT+TGG | - | chr4_1:64055672-64055691 | Msa0563620:intron | 35.0% |
| ACAAGGAGATTCTATGTGTT+GGG | + | chr4_1:64055775-64055794 | None:intergenic | 35.0% | |
| CATGCAACATATTATCAACG+AGG | + | chr4_1:64055932-64055951 | None:intergenic | 35.0% | |
| ATCCCAATAGAATTCCAAGA+AGG | + | chr4_1:64055972-64055991 | None:intergenic | 35.0% | |
| ! | TGAAACTGATGACTCTGAAA+TGG | - | chr4_1:64056043-64056062 | Msa0563620:intron | 35.0% |
| ATAACAACACATGTCAGTTG+GGG | - | chr4_1:64056504-64056523 | Msa0563620:intron | 35.0% | |
| TCCTTAGCCAAGTAAATGTT+TGG | - | chr4_1:64056694-64056713 | Msa0563620:intron | 35.0% | |
| ACCAAACATTTACTTGGCTA+AGG | + | chr4_1:64056698-64056717 | None:intergenic | 35.0% | |
| GATACGACAGAAAAGTTGAA+GGG | + | chr4_1:64056875-64056894 | None:intergenic | 35.0% | |
| TGATACGACAGAAAAGTTGA+AGG | + | chr4_1:64056876-64056895 | None:intergenic | 35.0% | |
| TCTTTCCTACATGCTATTAG+TGG | - | chr4_1:64056898-64056917 | Msa0563620:CDS | 35.0% | |
| ATAGCACAAAGGATTCACAA+TGG | - | chr4_1:64057032-64057051 | Msa0563620:intron | 35.0% | |
| TAGCACAAAGGATTCACAAT+GGG | - | chr4_1:64057033-64057052 | Msa0563620:intron | 35.0% | |
| !!! | GCAAATTGCACTGATTGTTT+TGG | - | chr4_1:64057097-64057116 | Msa0563620:intron | 35.0% |
| CTTGGGTAATGACAAAATCT+GGG | + | chr4_1:64057156-64057175 | None:intergenic | 35.0% | |
| TCATTCAACTGTTAATGTGG+GGG | + | chr4_1:64057227-64057246 | None:intergenic | 35.0% | |
| GTCATTCAACTGTTAATGTG+GGG | + | chr4_1:64057228-64057247 | None:intergenic | 35.0% | |
| CAGTCATTCAACTGTTAATG+TGG | + | chr4_1:64057230-64057249 | None:intergenic | 35.0% | |
| AAAGTGAGTATTTGAGAGCT+TGG | - | chr4_1:64057263-64057282 | Msa0563620:intron | 35.0% | |
| ! | TCTAATGAGTTGAAGTTTGC+TGG | - | chr4_1:64057363-64057382 | Msa0563620:intron | 35.0% |
| !! | TTAAATTTTAGCGGCAGCTA+AGG | - | chr4_1:64057960-64057979 | Msa0563620:intron | 35.0% |
| GTTGATCTTCATGTTTGTAG+GGG | - | chr4_1:64058358-64058377 | Msa0563620:intron | 35.0% | |
| CAAAAACATGAGGTTCTGTA+GGG | + | chr4_1:64058618-64058637 | None:intergenic | 35.0% | |
| CTGATGTGAATGTATTGTCA+TGG | - | chr4_1:64058722-64058741 | Msa0563620:CDS | 35.0% | |
| TGAATGTATTGTCATGGAAC+AGG | - | chr4_1:64058728-64058747 | Msa0563620:CDS | 35.0% | |
| !!! | AGGTATTCAGCATTGACTTT+TGG | - | chr4_1:64058748-64058767 | Msa0563620:CDS | 35.0% |
| TTTCATTGTACTGAGTAGGT+TGG | - | chr4_1:64058819-64058838 | Msa0563620:intron | 35.0% | |
| ! | TCTGAGATCACGAATAGATA+TGG | + | chr4_1:64058881-64058900 | None:intergenic | 35.0% |
| ! | ACCCAGAAATGCATTTTTGA+AGG | - | chr4_1:64059222-64059241 | Msa0563620:intron | 35.0% |
| TATTTGCAGAGTCCATGAAA+GGG | + | chr4_1:64059615-64059634 | None:intergenic | 35.0% | |
| TTATTTGCAGAGTCCATGAA+AGG | + | chr4_1:64059616-64059635 | None:intergenic | 35.0% | |
| TAATCCTTTGCCACAGAATA+TGG | - | chr4_1:64059697-64059716 | Msa0563620:intron | 35.0% | |
| AATCCTTTGCCACAGAATAT+GGG | - | chr4_1:64059698-64059717 | Msa0563620:intron | 35.0% | |
| TGAATAAACAATAGTTGGGG+AGG | + | chr4_1:64059807-64059826 | None:intergenic | 35.0% | |
| CCTGGTGAATAAACAATAGT+TGG | + | chr4_1:64059812-64059831 | None:intergenic | 35.0% | |
| CCAACTATTGTTTATTCACC+AGG | - | chr4_1:64059809-64059828 | Msa0563620:intron | 35.0% | |
| GCAAAGTGATTCAAATTACC+TGG | + | chr4_1:64059830-64059849 | None:intergenic | 35.0% | |
| AGCCTATTTGAGTATAAGCT+AGG | - | chr4_1:64059975-64059994 | Msa0563620:intron | 35.0% | |
| CTAATCAAGGAGTTCTATCA+TGG | + | chr4_1:64060099-64060118 | None:intergenic | 35.0% | |
| TTGTCCCTGTTACAAGTTAA+AGG | + | chr4_1:64060149-64060168 | None:intergenic | 35.0% | |
| CTTTGGCATAACTTAGATTC+AGG | + | chr4_1:64060397-64060416 | None:intergenic | 35.0% | |
| AAAGTTAGCACAAGCAGATA+AGG | + | chr4_1:64060476-64060495 | None:intergenic | 35.0% | |
| !!! | TTGAGTTGAGTGTTTTGAGA+TGG | - | chr4_1:64060504-64060523 | Msa0563620:intron | 35.0% |
| ACTAGGTTACGCAGATTGTA+GGG | + | chr4_1:64054418-64054437 | None:intergenic | 40.0% | |
| AACTAGGTTACGCAGATTGT+AGG | + | chr4_1:64054419-64054438 | None:intergenic | 40.0% | |
| CGGCATAAAACATCGTCAAA+AGG | - | chr4_1:64054630-64054649 | Msa0563620:three_prime_UTR | 40.0% | |
| AAAGGCAAAGAGCAAGAACA+AGG | - | chr4_1:64054648-64054667 | Msa0563620:three_prime_UTR | 40.0% | |
| GAAACGGAGTGAATCATCTT+CGG | - | chr4_1:64054777-64054796 | Msa0563620:CDS | 40.0% | |
| !! | ATATTGGATGGCCTTGTCTT+AGG | - | chr4_1:64054914-64054933 | Msa0563620:intron | 40.0% |
| GCACTTGAGTGACATAGAAT+TGG | + | chr4_1:64055295-64055314 | None:intergenic | 40.0% | |
| ! | ACACCTTCAATCAGAAGTGT+CGG | - | chr4_1:64055360-64055379 | Msa0563620:intron | 40.0% |
| !! | TCGGTACTTTAGAGTTCAAG+AGG | - | chr4_1:64055379-64055398 | Msa0563620:intron | 40.0% |
| ! | CGATATTTTACGTGACACCA+TGG | - | chr4_1:64055505-64055524 | Msa0563620:intron | 40.0% |
| TTCTGTTCGAACTAAACCCA+TGG | + | chr4_1:64055525-64055544 | None:intergenic | 40.0% | |
| GTATTTCATTACAGGGACAC+AGG | - | chr4_1:64055559-64055578 | Msa0563620:CDS | 40.0% | |
| TTTCCGTTACCCCATTTGAT+TGG | + | chr4_1:64055663-64055682 | None:intergenic | 40.0% | |
| CACAAGGAGATTCTATGTGT+TGG | + | chr4_1:64055776-64055795 | None:intergenic | 40.0% | |
| ACGTCTCTTCCCAGAAATAT+TGG | + | chr4_1:64056006-64056025 | None:intergenic | 40.0% | |
| GAGTCATCAGTTTCACGTTT+AGG | + | chr4_1:64056038-64056057 | None:intergenic | 40.0% | |
| !! | ACTGATGACTCTGAAATGGA+TGG | - | chr4_1:64056047-64056066 | Msa0563620:intron | 40.0% |
| ! | GATGATAGTGAAGACGAAGA+AGG | - | chr4_1:64056089-64056108 | Msa0563620:intron | 40.0% |
| TCAACTTCAACACAGTCAAG+AGG | + | chr4_1:64056186-64056205 | None:intergenic | 40.0% | |
| CTCACGAAGGTTGTATTAAC+CGG | - | chr4_1:64056254-64056273 | Msa0563620:intron | 40.0% | |
| ! | TATATGGGGATTTTGTGCCA+TGG | + | chr4_1:64056287-64056306 | None:intergenic | 40.0% |
| ATCCCCATATATGTGCATCT+TGG | - | chr4_1:64056296-64056315 | Msa0563620:CDS | 40.0% | |
| TCCCCATATATGTGCATCTT+GGG | - | chr4_1:64056297-64056316 | Msa0563620:CDS | 40.0% | |
| TGCCCAAGATGCACATATAT+GGG | + | chr4_1:64056302-64056321 | None:intergenic | 40.0% | |
| ATCGTATTAATGATGCACGC+AGG | + | chr4_1:64056656-64056675 | None:intergenic | 40.0% | |
| ACGATTAGTGATGTACAGAC+TGG | - | chr4_1:64056671-64056690 | Msa0563620:intron | 40.0% | |
| !! | AGTTGAAGGGTGCCAAATAA+TGG | + | chr4_1:64056862-64056881 | None:intergenic | 40.0% |
| TCTAGCCACTAATAGCATGT+AGG | + | chr4_1:64056906-64056925 | None:intergenic | 40.0% | |
| AGGATTCACAATGGGAATAG+AGG | - | chr4_1:64057041-64057060 | Msa0563620:intron | 40.0% | |
| GGATTCACAATGGGAATAGA+GGG | - | chr4_1:64057042-64057061 | Msa0563620:intron | 40.0% | |
| GCTTGGGTAATGACAAAATC+TGG | + | chr4_1:64057157-64057176 | None:intergenic | 40.0% | |
| ACATTGTCAAAGGGATGCTT+GGG | + | chr4_1:64057173-64057192 | None:intergenic | 40.0% | |
| AACATTGTCAAAGGGATGCT+TGG | + | chr4_1:64057174-64057193 | None:intergenic | 40.0% | |
| AGAGCTTGGAATTGTAACTG+AGG | - | chr4_1:64057277-64057296 | Msa0563620:intron | 40.0% | |
| TTGTAACTGAGGACTCGATT+TGG | - | chr4_1:64057288-64057307 | Msa0563620:intron | 40.0% | |
| ! | CAGGTATAATTTTCGCCCTT+GGG | - | chr4_1:64057742-64057761 | Msa0563620:intron | 40.0% |
| GTAACCTCATTTGTACCCAA+GGG | + | chr4_1:64057760-64057779 | None:intergenic | 40.0% | |
| AGTAACCTCATTTGTACCCA+AGG | + | chr4_1:64057761-64057780 | None:intergenic | 40.0% | |
| ! | CAGGTATAATTTTCGCCCTT+GGG | - | chr4_1:64057742-64057761 | Msa0563620:intron | 40.0% |
| GTAACCTCATTTGTACCCAA+GGG | + | chr4_1:64057760-64057779 | None:intergenic | 40.0% | |
| AGTAACCTCATTTGTACCCA+AGG | + | chr4_1:64057761-64057780 | None:intergenic | 40.0% | |
| ATGAAGGCTATGCTATAGAC+TGG | - | chr4_1:64058214-64058233 | Msa0563620:intron | 40.0% | |
| GCTTGTATCCGGTAATCATT+GGG | - | chr4_1:64058257-64058276 | Msa0563620:intron | 40.0% | |
| CTGTCAGTATGTCCAGTAAA+AGG | + | chr4_1:64058449-64058468 | None:intergenic | 40.0% | |
| ACACTGAAATGCTCCGAAAA+AGG | + | chr4_1:64058513-64058532 | None:intergenic | 40.0% | |
| GCAAAAACATGAGGTTCTGT+AGG | + | chr4_1:64058619-64058638 | None:intergenic | 40.0% | |
| GAGCAAGAAGCAAAAACATG+AGG | + | chr4_1:64058628-64058647 | None:intergenic | 40.0% | |
| TGCAATATGGGATACTCGTT+TGG | - | chr4_1:64058663-64058682 | Msa0563620:intron | 40.0% | |
| GCAATATGGGATACTCGTTT+GGG | - | chr4_1:64058664-64058683 | Msa0563620:intron | 40.0% | |
| CAATATGGGATACTCGTTTG+GGG | - | chr4_1:64058665-64058684 | Msa0563620:intron | 40.0% | |
| ! | TAGGTTGGCTAGTTGTATGT+TGG | - | chr4_1:64058834-64058853 | Msa0563620:intron | 40.0% |
| TCAGACTGCTTAAGGTATGT+TGG | - | chr4_1:64058896-64058915 | Msa0563620:intron | 40.0% | |
| AAGGAACTTCTAGATGCACT+TGG | - | chr4_1:64059241-64059260 | Msa0563620:intron | 40.0% | |
| GTATTCAAAATGCGCTACCA+CGG | + | chr4_1:64059399-64059418 | None:intergenic | 40.0% | |
| TGGATGTGATTGGATGCTTA+TGG | + | chr4_1:64059421-64059440 | None:intergenic | 40.0% | |
| ATCCAATCACATCCATTGAG+TGG | - | chr4_1:64059426-64059445 | Msa0563620:intron | 40.0% | |
| TACACCATCCACAGAATTGT+TGG | - | chr4_1:64059528-64059547 | Msa0563620:intron | 40.0% | |
| GAATTCGTCCAACAATTCTG+TGG | + | chr4_1:64059539-64059558 | None:intergenic | 40.0% | |
| !! | CTTTGGGTTTTACCCTTTCA+TGG | - | chr4_1:64059600-64059619 | Msa0563620:intron | 40.0% |
| !! | AGGAGCGTTTACTTGTTCTT+GGG | + | chr4_1:64059775-64059794 | None:intergenic | 40.0% |
| TGCTCAACAATGAGTACGTT+TGG | - | chr4_1:64059847-64059866 | Msa0563620:intron | 40.0% | |
| GCTCAACAATGAGTACGTTT+GGG | - | chr4_1:64059848-64059867 | Msa0563620:intron | 40.0% | |
| GCAGTACATACTATCATTCC+AGG | + | chr4_1:64060208-64060227 | None:intergenic | 40.0% | |
| ATAGTATGTACTGCAGCAGA+TGG | - | chr4_1:64060214-64060233 | Msa0563620:CDS | 40.0% | |
| ! | CAGTTTTCAACCACCTTACA+AGG | - | chr4_1:64060311-64060330 | Msa0563620:intron | 40.0% |
| ATAGCAGATACTGCCTTGTA+AGG | + | chr4_1:64060327-64060346 | None:intergenic | 40.0% | |
| TACAAGGCAGTATCTGCTAT+AGG | - | chr4_1:64060327-64060346 | Msa0563620:intron | 40.0% | |
| GGCATAACTTAGATTCAGGA+TGG | + | chr4_1:64060393-64060412 | None:intergenic | 40.0% | |
| !!! | AGTTGAGTGTTTTGAGATGG+TGG | - | chr4_1:64060507-64060526 | Msa0563620:intron | 40.0% |
| !!! | GTTGAGTGTTTTGAGATGGT+GGG | - | chr4_1:64060508-64060527 | Msa0563620:intron | 40.0% |
| ACCTTTGACAAACCTGTGAG+TGG | + | chr4_1:64054470-64054489 | None:intergenic | 45.0% | |
| TCTTCCAACTTATCCACACC+AGG | + | chr4_1:64054841-64054860 | None:intergenic | 45.0% | |
| TAGTCACTTGGGTAGCACTT+GGG | - | chr4_1:64055164-64055183 | Msa0563620:intron | 45.0% | |
| GCACTTGGGTGACATAGAAT+TGG | - | chr4_1:64055178-64055197 | Msa0563620:intron | 45.0% | |
| TACACCGACACAAGTGACTA+CGG | + | chr4_1:64055321-64055340 | None:intergenic | 45.0% | |
| ! | GTACCGACACTTCTGATTGA+AGG | + | chr4_1:64055366-64055385 | None:intergenic | 45.0% |
| CACTAGCAGATAGCATCACA+AGG | + | chr4_1:64055792-64055811 | None:intergenic | 45.0% | |
| TAATATGTTGCATGTGCCCC+AGG | - | chr4_1:64055938-64055957 | Msa0563620:intron | 45.0% | |
| !! | TGACTCTGAAATGGATGGTG+AGG | - | chr4_1:64056052-64056071 | Msa0563620:intron | 45.0% |
| GATAGTGAAGACGAAGAAGG+TGG | - | chr4_1:64056092-64056111 | Msa0563620:intron | 45.0% | |
| TCTGTTCACACCTACAGTTG+CGG | - | chr4_1:64056224-64056243 | Msa0563620:intron | 45.0% | |
| TATTAACCGGATACGCTCCA+TGG | - | chr4_1:64056267-64056286 | Msa0563620:intron | 45.0% | |
| GCCCAAGATGCACATATATG+GGG | + | chr4_1:64056301-64056320 | None:intergenic | 45.0% | |
| CTGCCCAAGATGCACATATA+TGG | + | chr4_1:64056303-64056322 | None:intergenic | 45.0% | |
| TCAGTTGGGGAAACTTCAAG+TGG | - | chr4_1:64056517-64056536 | Msa0563620:intron | 45.0% | |
| CAGTTGGGGAAACTTCAAGT+GGG | - | chr4_1:64056518-64056537 | Msa0563620:intron | 45.0% | |
| GTTGTGGCTGAATAGCACAA+AGG | - | chr4_1:64057021-64057040 | Msa0563620:intron | 45.0% | |
| ! | TGTTGGTAGGTTCACAAGTC+AGG | + | chr4_1:64057613-64057632 | None:intergenic | 45.0% |
| ! | TATTTCTGCGGTTCCACAAC+AGG | - | chr4_1:64057646-64057665 | Msa0563620:intron | 45.0% |
| TATTATCTCCCGACCTGTTG+TGG | + | chr4_1:64057662-64057681 | None:intergenic | 45.0% | |
| !! | CTAGCTTTGAACTTTGTCGG+AGG | + | chr4_1:64057685-64057704 | None:intergenic | 45.0% |
| CCAAGGGCGAAAATTATACC+TGG | + | chr4_1:64057744-64057763 | None:intergenic | 45.0% | |
| ! | CCAGGTATAATTTTCGCCCT+TGG | - | chr4_1:64057741-64057760 | Msa0563620:intron | 45.0% |
| CCAAGGGCGAAAATTATACC+TGG | + | chr4_1:64057744-64057763 | None:intergenic | 45.0% | |
| ! | CCAGGTATAATTTTCGCCCT+TGG | - | chr4_1:64057741-64057760 | Msa0563620:intron | 45.0% |
| ATCAACTCCTTGGACACCTT+CGG | + | chr4_1:64058157-64058176 | None:intergenic | 45.0% | |
| GGCTTGTATCCGGTAATCAT+TGG | - | chr4_1:64058256-64058275 | Msa0563620:intron | 45.0% | |
| TTCCATGTTGCAGCAGATGT+AGG | + | chr4_1:64058413-64058432 | None:intergenic | 45.0% | |
| !! | CCGAAAAAGGTATTGCTTGG+CGG | + | chr4_1:64058500-64058519 | None:intergenic | 45.0% |
| ! | CCGCCAAGCAATACCTTTTT+CGG | - | chr4_1:64058497-64058516 | Msa0563620:intron | 45.0% |
| !! | GCTCCGAAAAAGGTATTGCT+TGG | + | chr4_1:64058503-64058522 | None:intergenic | 45.0% |
| TGTTCAATGAACCCTTGCAG+TGG | - | chr4_1:64058590-64058609 | Msa0563620:intron | 45.0% | |
| !! | TGTTTTTGCTTCTTGCTCCG+TGG | - | chr4_1:64058630-64058649 | Msa0563620:intron | 45.0% |
| !! | TGCGTCTTTTCAAGCACACA+AGG | - | chr4_1:64058699-64058718 | Msa0563620:intron | 45.0% |
| TCGTGATCTCAGACTGCTTA+AGG | - | chr4_1:64058888-64058907 | Msa0563620:intron | 45.0% | |
| TGAATAGGAAGGAGATTCCG+TGG | - | chr4_1:64059379-64059398 | Msa0563620:intron | 45.0% | |
| CTCCACTCAATGGATGTGAT+TGG | + | chr4_1:64059431-64059450 | None:intergenic | 45.0% | |
| TCCACACGAAGCTTCTTCAT+TGG | - | chr4_1:64059451-64059470 | Msa0563620:intron | 45.0% | |
| TCGTCCAACAATTCTGTGGA+TGG | + | chr4_1:64059535-64059554 | None:intergenic | 45.0% | |
| GAGAAAGGTCCCATATTCTG+TGG | + | chr4_1:64059710-64059729 | None:intergenic | 45.0% | |
| CAGAATATGGGACCTTTCTC+TGG | - | chr4_1:64059710-64059729 | Msa0563620:intron | 45.0% | |
| ! | ATGGGACCTTTCTCTGGAAA+AGG | - | chr4_1:64059716-64059735 | Msa0563620:intron | 45.0% |
| !! | CAGGAGCGTTTACTTGTTCT+TGG | + | chr4_1:64059776-64059795 | None:intergenic | 45.0% |
| AAGACCCCAAAGAACTGCAT+TGG | - | chr4_1:64060170-64060189 | Msa0563620:CDS | 45.0% | |
| TGTGCCAATGCAGTTCTTTG+GGG | + | chr4_1:64060177-64060196 | None:intergenic | 45.0% | |
| GTGTGCCAATGCAGTTCTTT+GGG | + | chr4_1:64060178-64060197 | None:intergenic | 45.0% | |
| TGTGTGCCAATGCAGTTCTT+TGG | + | chr4_1:64060179-64060198 | None:intergenic | 45.0% | |
| GTGTATCATGCAGCTTCTGA+TGG | + | chr4_1:64060280-64060299 | None:intergenic | 45.0% | |
| GACGGAGAAGAGAGAGAACT+AGG | + | chr4_1:64054435-64054454 | None:intergenic | 50.0% | |
| !! | GAGTGGCTTGTTGTTGGTGA+CGG | + | chr4_1:64054453-64054472 | None:intergenic | 50.0% |
| ACCAACAACAAGCCACTCAC+AGG | - | chr4_1:64054455-64054474 | Msa0563620:three_prime_UTR | 50.0% | |
| !! | ACCTGTGAGTGGCTTGTTGT+TGG | + | chr4_1:64054459-64054478 | None:intergenic | 50.0% |
| GCCACTCACAGGTTTGTCAA+AGG | - | chr4_1:64054466-64054485 | Msa0563620:three_prime_UTR | 50.0% | |
| ACGGAGTGAATCATCTTCGG+CGG | - | chr4_1:64054780-64054799 | Msa0563620:CDS | 50.0% | |
| ! | CACACTTTTACCGGAACCTG+TGG | + | chr4_1:64054814-64054833 | None:intergenic | 50.0% |
| CACAGGTTCCGGTAAAAGTG+TGG | - | chr4_1:64054812-64054831 | Msa0563620:CDS | 50.0% | |
| ! | CCAGGTTGCCACACTTTTAC+CGG | + | chr4_1:64054823-64054842 | None:intergenic | 50.0% |
| ! | AAAAGTGTGGCAACCTGGTG+TGG | - | chr4_1:64054825-64054844 | Msa0563620:CDS | 50.0% |
| GCAACCTGGTGTGGATAAGT+TGG | - | chr4_1:64054834-64054853 | Msa0563620:CDS | 50.0% | |
| GTAGTCACTTGGGTAGCACT+TGG | - | chr4_1:64055163-64055182 | Msa0563620:intron | 50.0% | |
| GCCGATCACAATGTCACAAG+CGG | - | chr4_1:64055218-64055237 | Msa0563620:CDS | 50.0% | |
| GCCGCTTGTGACATTGTGAT+CGG | + | chr4_1:64055222-64055241 | None:intergenic | 50.0% | |
| CTACCCGTAGTCACTTGTGT+CGG | - | chr4_1:64055314-64055333 | Msa0563620:intron | 50.0% | |
| ACACCGACACAAGTGACTAC+GGG | + | chr4_1:64055320-64055339 | None:intergenic | 50.0% | |
| ! | CTTGTGTCGGTGTAGTACAC+TGG | - | chr4_1:64055327-64055346 | Msa0563620:intron | 50.0% |
| CAAGAAGGTTTCTCAGCCTG+GGG | + | chr4_1:64055957-64055976 | None:intergenic | 50.0% | |
| CCAAGAAGGTTTCTCAGCCT+GGG | + | chr4_1:64055958-64055977 | None:intergenic | 50.0% | |
| TCCAAGAAGGTTTCTCAGCC+TGG | + | chr4_1:64055959-64055978 | None:intergenic | 50.0% | |
| ! | TGGTGAGGATAGTGATAGCG+AGG | - | chr4_1:64056067-64056086 | Msa0563620:intron | 50.0% |
| AGTGAAGACGAAGAAGGTGG+TGG | - | chr4_1:64056095-64056114 | Msa0563620:intron | 50.0% | |
| TACCTGCAAAGTAGGACCAC+CGG | + | chr4_1:64056123-64056142 | None:intergenic | 50.0% | |
| !! | GAGGGTGTTACCTGCAAAGT+AGG | + | chr4_1:64056131-64056150 | None:intergenic | 50.0% |
| TTCACACCTACAGTTGCGGA+AGG | - | chr4_1:64056228-64056247 | Msa0563620:intron | 50.0% | |
| GAGTTACCTTCCGCAACTGT+AGG | + | chr4_1:64056237-64056256 | None:intergenic | 50.0% | |
| TTGCGGAAGGTAACTCACGA+AGG | - | chr4_1:64056241-64056260 | Msa0563620:intron | 50.0% | |
| TTTGTGCCATGGAGCGTATC+CGG | + | chr4_1:64056276-64056295 | None:intergenic | 50.0% | |
| TGTGCATCTTGGGCAGAATC+TGG | - | chr4_1:64056307-64056326 | Msa0563620:CDS | 50.0% | |
| ! | AAATCTGGGACATCAGCCCA+TGG | + | chr4_1:64057142-64057161 | None:intergenic | 50.0% |
| AGGTTCACAAGTCAGGTCGT+GGG | + | chr4_1:64057606-64057625 | None:intergenic | 50.0% | |
| TAGGTTCACAAGTCAGGTCG+TGG | + | chr4_1:64057607-64057626 | None:intergenic | 50.0% | |
| TTCGCCCTTGGGTACAAATG+AGG | - | chr4_1:64057753-64057772 | Msa0563620:intron | 50.0% | |
| TTCGCCCTTGGGTACAAATG+AGG | - | chr4_1:64057753-64057772 | Msa0563620:intron | 50.0% | |
| AGCGGCAGCTAAGGTTGTTA+AGG | - | chr4_1:64057969-64057988 | Msa0563620:intron | 50.0% | |
| GCGGCAGCTAAGGTTGTTAA+GGG | - | chr4_1:64057970-64057989 | Msa0563620:intron | 50.0% | |
| CTAGCAGAGACAGAAACCGA+AGG | - | chr4_1:64058138-64058157 | Msa0563620:intron | 50.0% | |
| !! | ACAGAAACCGAAGGTGTCCA+AGG | - | chr4_1:64058147-64058166 | Msa0563620:intron | 50.0% |
| CCTGAACTGCATCAACTCCT+TGG | + | chr4_1:64058167-64058186 | None:intergenic | 50.0% | |
| !! | CCAAGGAGTTGATGCAGTTC+AGG | - | chr4_1:64058164-64058183 | Msa0563620:intron | 50.0% |
| ACTGGAGTCCTCTTGTTCCA+GGG | - | chr4_1:64058232-64058251 | Msa0563620:intron | 50.0% | |
| AGCCTACATCTGCTGCAACA+TGG | - | chr4_1:64058408-64058427 | Msa0563620:intron | 50.0% | |
| TATGGGATACTCGTTTGGGG+AGG | - | chr4_1:64058668-64058687 | Msa0563620:intron | 50.0% | |
| TGTGCTTGAAAAGACGCAGC+TGG | + | chr4_1:64058697-64058716 | None:intergenic | 50.0% | |
| ! | GGCTAGTTGTATGTTGGCGT+CGG | - | chr4_1:64058840-64058859 | Msa0563620:intron | 50.0% |
| GCTAGTTGTATGTTGGCGTC+GGG | - | chr4_1:64058841-64058860 | Msa0563620:intron | 50.0% | |
| TTCGTGTGGACTCCACTCAA+TGG | + | chr4_1:64059441-64059460 | None:intergenic | 50.0% | |
| GCCAATGAAGAAGCTTCGTG+TGG | + | chr4_1:64059455-64059474 | None:intergenic | 50.0% | |
| GGTCCCATATTCTGTGGCAA+AGG | + | chr4_1:64059704-64059723 | None:intergenic | 50.0% | |
| ! | CCTCGTCCTTTTCCAGAGAA+AGG | + | chr4_1:64059725-64059744 | None:intergenic | 50.0% |
| ! | CCTTTCTCTGGAAAAGGACG+AGG | - | chr4_1:64059722-64059741 | Msa0563620:intron | 50.0% |
| TCTGGAAAAGGACGAGGAAG+AGG | - | chr4_1:64059728-64059747 | Msa0563620:intron | 50.0% | |
| CATTGGCACACACAGATTCC+TGG | - | chr4_1:64060187-64060206 | Msa0563620:CDS | 50.0% | |
| TCATGCAGCTTCTGATGGCA+AGG | + | chr4_1:64060275-64060294 | None:intergenic | 50.0% | |
| GCAGATACTGCCTTGTAAGG+TGG | + | chr4_1:64060324-64060343 | None:intergenic | 50.0% | |
| GAGTGAATCATCTTCGGCGG+CGG | - | chr4_1:64054783-64054802 | Msa0563620:CDS | 55.0% | |
| ! | CCGGTAAAAGTGTGGCAACC+TGG | - | chr4_1:64054820-64054839 | Msa0563620:CDS | 55.0% |
| CCCAGGCTGAGAAACCTTCT+TGG | - | chr4_1:64055955-64055974 | Msa0563620:intron | 55.0% | |
| ! | TTCTGGGAAGAGACGTGAGC+TGG | - | chr4_1:64056010-64056029 | Msa0563620:intron | 55.0% |
| GGCAGAATCTGGTCATGTGC+AGG | - | chr4_1:64056318-64056337 | Msa0563620:CDS | 55.0% | |
| TCTGCGGTTCCACAACAGGT+CGG | - | chr4_1:64057650-64057669 | Msa0563620:intron | 55.0% | |
| GACTGGAGTCCTCTTGTTCC+AGG | - | chr4_1:64058231-64058250 | Msa0563620:intron | 55.0% | |
| ACAAGCCTCCCTGGAACAAG+AGG | + | chr4_1:64058243-64058262 | None:intergenic | 55.0% | |
| GTTCCAGGGAGGCTTGTATC+CGG | - | chr4_1:64058246-64058265 | Msa0563620:intron | 55.0% | |
| TTACCGGATACAAGCCTCCC+TGG | + | chr4_1:64058252-64058271 | None:intergenic | 55.0% | |
| TCTGTAGGGCTCCACTGCAA+GGG | + | chr4_1:64058604-64058623 | None:intergenic | 55.0% | |
| TTCTGTAGGGCTCCACTGCA+AGG | + | chr4_1:64058605-64058624 | None:intergenic | 55.0% | |
| ! | TTGGCGTCGGGTAGTGATGA+TGG | - | chr4_1:64058853-64058872 | Msa0563620:intron | 55.0% |
| ! | TGGCGTCGGGTAGTGATGAT+GGG | - | chr4_1:64058854-64058873 | Msa0563620:intron | 55.0% |
| GGAAAAGGACGAGGAAGAGG+AGG | - | chr4_1:64059731-64059750 | Msa0563620:intron | 55.0% | |
| AGTTGGGGAGGCAGATCTTC+AGG | + | chr4_1:64059795-64059814 | None:intergenic | 55.0% | |
| TGAATCATCTTCGGCGGCGG+CGG | - | chr4_1:64054786-64054805 | Msa0563620:CDS | 60.0% | |
| ! | GACGAAGAAGGTGGTGGTGC+CGG | - | chr4_1:64056101-64056120 | Msa0563620:intron | 60.0% |
| TGCCGGTGGTCCTACTTTGC+AGG | - | chr4_1:64056118-64056137 | Msa0563620:intron | 60.0% | |
| CTGCGGTTCCACAACAGGTC+GGG | - | chr4_1:64057651-64057670 | Msa0563620:intron | 60.0% | |
| GGAGTCCTCTTGTTCCAGGG+AGG | - | chr4_1:64058235-64058254 | Msa0563620:intron | 60.0% | |
| ! | GAAGAAGGTGGTGGTGCCGG+TGG | - | chr4_1:64056104-64056123 | Msa0563620:intron | 65.0% |
| ! | GGCGGCGGCGCCACAGGTTC+CGG | - | chr4_1:64054801-64054820 | Msa0563620:CDS | 80.0% |
| ! | TTCGGCGGCGGCGGCGCCAC+AGG | - | chr4_1:64054795-64054814 | Msa0563620:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 64054383 | 64060662 | 64054383 | ID=Msa0563620;Name=Msa0563620 |
| chr4_1 | mRNA | 64054383 | 64060662 | 64054383 | ID=Msa0563620-mRNA-1;Parent=Msa0563620;Name=Msa0563620-mRNA-1;_AED=0.08;_eAED=0.08;_QI=112|1|1|1|0.91|0.84|13|368|469 |
| chr4_1 | exon | 64054383 | 64054882 | 64054383 | ID=Msa0563620-mRNA-1:exon:20412;Parent=Msa0563620-mRNA-1 |
| chr4_1 | exon | 64055215 | 64055332 | 64055215 | ID=Msa0563620-mRNA-1:exon:20411;Parent=Msa0563620-mRNA-1 |
| chr4_1 | exon | 64055544 | 64055659 | 64055544 | ID=Msa0563620-mRNA-1:exon:20410;Parent=Msa0563620-mRNA-1 |
| chr4_1 | exon | 64056136 | 64056208 | 64056136 | ID=Msa0563620-mRNA-1:exon:20409;Parent=Msa0563620-mRNA-1 |
| chr4_1 | exon | 64056296 | 64056435 | 64056296 | ID=Msa0563620-mRNA-1:exon:20408;Parent=Msa0563620-mRNA-1 |
| chr4_1 | exon | 64056561 | 64056667 | 64056561 | ID=Msa0563620-mRNA-1:exon:20407;Parent=Msa0563620-mRNA-1 |
| chr4_1 | exon | 64056778 | 64056937 | 64056778 | ID=Msa0563620-mRNA-1:exon:20406;Parent=Msa0563620-mRNA-1 |
| chr4_1 | exon | 64058706 | 64058804 | 64058706 | ID=Msa0563620-mRNA-1:exon:20405;Parent=Msa0563620-mRNA-1 |
| chr4_1 | exon | 64058906 | 64059085 | 64058906 | ID=Msa0563620-mRNA-1:exon:20404;Parent=Msa0563620-mRNA-1 |
| chr4_1 | exon | 64059465 | 64059543 | 64059465 | ID=Msa0563620-mRNA-1:exon:20403;Parent=Msa0563620-mRNA-1 |
| chr4_1 | exon | 64060110 | 64060267 | 64060110 | ID=Msa0563620-mRNA-1:exon:20402;Parent=Msa0563620-mRNA-1 |
| chr4_1 | exon | 64060376 | 64060441 | 64060376 | ID=Msa0563620-mRNA-1:exon:20401;Parent=Msa0563620-mRNA-1 |
| chr4_1 | exon | 64060569 | 64060662 | 64060569 | ID=Msa0563620-mRNA-1:exon:20400;Parent=Msa0563620-mRNA-1 |
| chr4_1 | five_prime_UTR | 64060569 | 64060662 | 64060569 | ID=Msa0563620-mRNA-1:five_prime_utr;Parent=Msa0563620-mRNA-1 |
| chr4_1 | five_prime_UTR | 64060424 | 64060441 | 64060424 | ID=Msa0563620-mRNA-1:five_prime_utr;Parent=Msa0563620-mRNA-1 |
| chr4_1 | CDS | 64060376 | 64060423 | 64060376 | ID=Msa0563620-mRNA-1:cds;Parent=Msa0563620-mRNA-1 |
| chr4_1 | CDS | 64060110 | 64060267 | 64060110 | ID=Msa0563620-mRNA-1:cds;Parent=Msa0563620-mRNA-1 |
| chr4_1 | CDS | 64059465 | 64059543 | 64059465 | ID=Msa0563620-mRNA-1:cds;Parent=Msa0563620-mRNA-1 |
| chr4_1 | CDS | 64058906 | 64059085 | 64058906 | ID=Msa0563620-mRNA-1:cds;Parent=Msa0563620-mRNA-1 |
| chr4_1 | CDS | 64058706 | 64058804 | 64058706 | ID=Msa0563620-mRNA-1:cds;Parent=Msa0563620-mRNA-1 |
| chr4_1 | CDS | 64056778 | 64056937 | 64056778 | ID=Msa0563620-mRNA-1:cds;Parent=Msa0563620-mRNA-1 |
| chr4_1 | CDS | 64056561 | 64056667 | 64056561 | ID=Msa0563620-mRNA-1:cds;Parent=Msa0563620-mRNA-1 |
| chr4_1 | CDS | 64056296 | 64056435 | 64056296 | ID=Msa0563620-mRNA-1:cds;Parent=Msa0563620-mRNA-1 |
| chr4_1 | CDS | 64056136 | 64056208 | 64056136 | ID=Msa0563620-mRNA-1:cds;Parent=Msa0563620-mRNA-1 |
| chr4_1 | CDS | 64055544 | 64055659 | 64055544 | ID=Msa0563620-mRNA-1:cds;Parent=Msa0563620-mRNA-1 |
| chr4_1 | CDS | 64055215 | 64055332 | 64055215 | ID=Msa0563620-mRNA-1:cds;Parent=Msa0563620-mRNA-1 |
| chr4_1 | CDS | 64054751 | 64054882 | 64054751 | ID=Msa0563620-mRNA-1:cds;Parent=Msa0563620-mRNA-1 |
| chr4_1 | three_prime_UTR | 64054383 | 64054750 | 64054383 | ID=Msa0563620-mRNA-1:three_prime_utr;Parent=Msa0563620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
