Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105460 | XP_003622978.1 | 98.626 | 364 | 5 | 0 | 1 | 364 | 1 | 364 | 0.0 | 650 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105460 | G7L2B5 | 98.626 | 364 | 5 | 0 | 1 | 364 | 1 | 364 | 0.0 | 650 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032780 | Msa1105460 | 0.810235 | 1.274904e-50 | -8.615850e-47 |
| Msa0105370 | Msa1105460 | 0.845537 | 3.818657e-59 | -8.615850e-47 |
| Msa0120520 | Msa1105460 | 0.819626 | 1.052393e-52 | -8.615850e-47 |
| Msa0608320 | Msa1105460 | 0.819661 | 1.033064e-52 | -8.615850e-47 |
| Msa0664560 | Msa1105460 | 0.802754 | 4.828510e-49 | -8.615850e-47 |
| Msa0765080 | Msa1105460 | 0.831993 | 1.217708e-55 | -8.615850e-47 |
| Msa0172900 | Msa1105460 | 0.831938 | 1.256699e-55 | -8.615850e-47 |
| Msa0189700 | Msa1105460 | 0.827983 | 1.157012e-54 | -8.615850e-47 |
| Msa0190240 | Msa1105460 | 0.802949 | 4.400407e-49 | -8.615850e-47 |
| Msa0229230 | Msa1105460 | 0.832093 | 1.150681e-55 | -8.615850e-47 |
| Msa0230490 | Msa1105460 | 0.814686 | 1.357708e-51 | -8.615850e-47 |
| Msa0232010 | Msa1105460 | 0.828913 | 6.901905e-55 | -8.615850e-47 |
| Msa0232080 | Msa1105460 | 0.832226 | 1.066442e-55 | -8.615850e-47 |
| Msa0375310 | Msa1105460 | 0.816279 | 6.002446e-52 | -8.615850e-47 |
| Msa0421500 | Msa1105460 | 0.819472 | 1.141094e-52 | -8.615850e-47 |
| Msa0428060 | Msa1105460 | 0.801274 | 9.727548e-49 | -8.615850e-47 |
| Msa1021470 | Msa1105460 | 0.885240 | 9.644060e-72 | -8.615850e-47 |
| Msa1060230 | Msa1105460 | 0.926412 | 4.856258e-91 | -8.615850e-47 |
| Msa1081930 | Msa1105460 | 0.800331 | 1.515553e-48 | -8.615850e-47 |
| Msa1105460 | Msa1105510 | 0.802763 | 4.808318e-49 | -8.615850e-47 |
| Msa1105460 | Msa1128600 | 0.805850 | 1.094034e-49 | -8.615850e-47 |
| Msa1105460 | Msa1134620 | 0.822457 | 2.345005e-53 | -8.615850e-47 |
| Msa1105460 | Msa1143370 | -0.801536 | 8.596915e-49 | -8.615850e-47 |
| Msa1105460 | Msa1148910 | 0.954113 | 6.133318e-112 | -8.615850e-47 |
| Msa1105460 | Msa1174780 | 0.802933 | 4.434823e-49 | -8.615850e-47 |
| Msa1105460 | Msa1225700 | 0.823793 | 1.143819e-53 | -8.615850e-47 |
| Msa1105460 | Msa1276830 | 0.827669 | 1.377332e-54 | -8.615850e-47 |
| Msa1105460 | Msa1343260 | 0.806444 | 8.201353e-50 | -8.615850e-47 |
| Msa1105460 | Msa1384880 | 0.800172 | 1.632541e-48 | -8.615850e-47 |
| Msa1105460 | Msa1434950 | 0.813711 | 2.228771e-51 | -8.615850e-47 |
| Msa1105460 | Msa1445910 | -0.803408 | 3.536936e-49 | -8.615850e-47 |
| Msa0258390 | Msa1105460 | 0.844888 | 5.719629e-59 | -8.615850e-47 |
| Msa0297610 | Msa1105460 | 0.811086 | 8.344836e-51 | -8.615850e-47 |
| Msa0335730 | Msa1105460 | 0.853236 | 2.731063e-61 | -8.615850e-47 |
| Msa0357900 | Msa1105460 | 0.803562 | 3.284841e-49 | -8.615850e-47 |
| Msa0513990 | Msa1105460 | 0.821545 | 3.813899e-53 | -8.615850e-47 |
| Msa0524110 | Msa1105460 | 0.801615 | 8.280829e-49 | -8.615850e-47 |
| Msa0563620 | Msa1105460 | 0.800357 | 1.496877e-48 | -8.615850e-47 |
| Msa0578140 | Msa1105460 | 0.802727 | 4.889589e-49 | -8.615850e-47 |
| Msa0588360 | Msa1105460 | 0.812246 | 4.668127e-51 | -8.615850e-47 |
| Msa0881290 | Msa1105460 | 0.827936 | 1.188104e-54 | -8.615850e-47 |
| Msa0891710 | Msa1105460 | 0.816359 | 5.761013e-52 | -8.615850e-47 |
| Msa0944680 | Msa1105460 | 0.809943 | 1.473776e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105460 | MtrunA17_Chr7g0237631 | 98.626 | 364 | 5 | 0 | 1 | 364 | 1 | 364 | 0.0 | 650 |
| Msa1105460 | MtrunA17_Chr3g0129481 | 62.281 | 114 | 43 | 0 | 29 | 142 | 1 | 114 | 1.84e-45 | 155 |
| Msa1105460 | MtrunA17_Chr3g0129471 | 63.158 | 114 | 42 | 0 | 29 | 142 | 1 | 114 | 1.84e-45 | 155 |
| Msa1105460 | MtrunA17_Chr3g0129501 | 62.281 | 114 | 43 | 0 | 29 | 142 | 1 | 114 | 2.88e-45 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105460 | AT3G07030.2 | 63.902 | 205 | 66 | 3 | 1 | 200 | 1 | 202 | 1.36e-78 | 247 |
| Msa1105460 | AT3G07030.3 | 63.902 | 205 | 66 | 3 | 1 | 200 | 1 | 202 | 1.36e-78 | 247 |
| Msa1105460 | AT3G07030.4 | 63.902 | 205 | 66 | 3 | 1 | 200 | 1 | 202 | 1.70e-78 | 247 |
| Msa1105460 | AT3G07030.5 | 77.305 | 141 | 32 | 0 | 1 | 141 | 1 | 141 | 8.25e-76 | 241 |
| Msa1105460 | AT3G07030.1 | 74.510 | 153 | 37 | 1 | 1 | 153 | 1 | 151 | 5.50e-75 | 238 |
| Msa1105460 | AT1G20220.1 | 62.222 | 135 | 51 | 0 | 1 | 135 | 1 | 135 | 5.88e-54 | 181 |
Find 197 sgRNAs with CRISPR-Local
Find 394 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCTTCATGAAACTGATT+TGG | 0.209849 | 7_3:+43944107 | Msa1105460:three_prime_UTR |
| GGAGGCAGAGGTGGAGGATA+TGG | 0.242926 | 7_3:+43943741 | Msa1105460:CDS |
| ATCTGTATCTGGTTTCTATA+TGG | 0.244819 | 7_3:+43944232 | Msa1105460:three_prime_UTR |
| GGTGGCAGGGGTGGAGGTTA+TGG | 0.269384 | 7_3:+43943672 | Msa1105460:CDS |
| CGAATAAATGGTTAAATAAA+AGG | 0.273057 | 7_3:+43939437 | None:intergenic |
| GGCAGGGGAGGCAGGGGATA+TGG | 0.278931 | 7_3:+43943909 | Msa1105460:CDS |
| CAGAGGTTGCTGCTGATAAT+TGG | 0.289288 | 7_3:-43942801 | None:intergenic |
| TAGAGGGAGAGGTAGGAATT+GGG | 0.296049 | 7_3:+43942968 | Msa1105460:CDS |
| GGAGGGTATGGTGGAGGCAG+AGG | 0.303211 | 7_3:+43943729 | Msa1105460:CDS |
| ACTGGACGGAAGCGAATAAA+TGG | 0.309437 | 7_3:+43939425 | None:intergenic |
| GGCAGAGGTGGAGGGTATGG+TGG | 0.314076 | 7_3:+43943720 | Msa1105460:CDS |
| TTACGCCACTTCGCTTCTTC+AGG | 0.337074 | 7_3:+43939705 | Msa1105460:CDS |
| TCTCTTCATGAAACTGATTT+GGG | 0.337371 | 7_3:+43944108 | Msa1105460:three_prime_UTR |
| GTAGAGGGAGAGGTAGGAAT+TGG | 0.337973 | 7_3:+43942967 | Msa1105460:CDS |
| GGAGGTCGAGGCAGAGGTTG+GGG | 0.340331 | 7_3:+43943207 | Msa1105460:CDS |
| AGGCAGAGGTGGAGGTGGTA+TGG | 0.341830 | 7_3:+43943845 | Msa1105460:CDS |
| GGGTATGGTGGAGGCAGAGG+TGG | 0.347375 | 7_3:+43943732 | Msa1105460:CDS |
| TTGATGGGAGTTTCAGGTTT+GGG | 0.347434 | 7_3:-43939631 | None:intergenic |
| TTTGTAGGAGGCAGAGGTGG+AGG | 0.350195 | 7_3:+43943837 | Msa1105460:CDS |
| GGAGGCAGAGGTGGAGGAAT+GGG | 0.351564 | 7_3:+43943813 | Msa1105460:CDS |
| GGAGGATATGGAGGAGGCAG+AGG | 0.356089 | 7_3:+43943753 | Msa1105460:CDS |
| AGGGGATATGGCCGTGGTAG+GGG | 0.356274 | 7_3:+43943921 | Msa1105460:CDS |
| GGGAGGTCGAGGCAGAGGTT+GGG | 0.358280 | 7_3:+43943206 | Msa1105460:CDS |
| GGAGGTTATGGAGGCAGAGG+TGG | 0.360488 | 7_3:+43943684 | Msa1105460:CDS |
| ATGGTGTTGGCAACCATAAA+AGG | 0.361711 | 7_3:-43944203 | None:intergenic |
| GGAGGTTATGAAGGTGGCAG+GGG | 0.362253 | 7_3:+43943660 | Msa1105460:CDS |
| AGAAAGAGGTAGAGAGAGAA+GGG | 0.363750 | 7_3:-43939572 | None:intergenic |
| ATCTCAATCACCTTGTCAAC+TGG | 0.366031 | 7_3:+43942543 | Msa1105460:CDS |
| AGAGGTAGGAATTGGGGAAG+GGG | 0.371584 | 7_3:+43942975 | Msa1105460:CDS |
| GGCAGAGGTGGTGGTTATGA+AGG | 0.375366 | 7_3:+43943768 | Msa1105460:CDS |
| GGTTATGAAGGTGGCAGGGG+TGG | 0.377101 | 7_3:+43943663 | Msa1105460:CDS |
| GGTTATGGAGGCAGAGGTGG+AGG | 0.378092 | 7_3:+43943687 | Msa1105460:CDS |
| ATGAAAGAGGCAGGGGAGGC+AGG | 0.389315 | 7_3:+43943901 | Msa1105460:CDS |
| GGCAGAGGTGGAGGTTATGA+AGG | 0.392200 | 7_3:+43943792 | Msa1105460:CDS |
| GGTGGTTACGGTGGCGGCAG+AGG | 0.397117 | 7_3:+43943564 | Msa1105460:intron |
| AATTGGGGAAGGGGTGGTTA+TGG | 0.397399 | 7_3:+43942984 | Msa1105460:CDS |
| TTTGATTGTTCAGCAGTAGA+TGG | 0.398319 | 7_3:-43942770 | None:intergenic |
| GGAAGGGGAGAGAAATGAAT+TGG | 0.399132 | 7_3:-43939506 | None:intergenic |
| CAGGGGATATGGCCGTGGTA+GGG | 0.401235 | 7_3:+43943920 | Msa1105460:CDS |
| TATGAAGGTGGCAGGGGTGG+AGG | 0.404403 | 7_3:+43943666 | Msa1105460:CDS |
| TATGGTGGAGGCAGAGGTGG+AGG | 0.406225 | 7_3:+43943735 | Msa1105460:CDS |
| CGAGGTCGTGGTCGAGGTAG+AGG | 0.410909 | 7_3:+43942951 | Msa1105460:CDS |
| TACGGTGGCGGCAGAGGTGG+AGG | 0.416974 | 7_3:+43943570 | Msa1105460:CDS |
| TATGAAGGAGGCAGAGGTGG+AGG | 0.418741 | 7_3:+43943807 | Msa1105460:CDS |
| TATGGAGGAGGCAGAGGTGG+TGG | 0.420030 | 7_3:+43943759 | Msa1105460:CDS |
| TACGAAGGAGGCAGAGGTGG+AGG | 0.420303 | 7_3:+43943711 | Msa1105460:CDS |
| CGGTACAAGACCCTCTTCAA+TGG | 0.422390 | 7_3:-43942398 | None:intergenic |
| GGCAGAGGTGGAGGTGGTAT+GGG | 0.422763 | 7_3:+43943846 | Msa1105460:CDS |
| GAGAGAAGGGGAAAATGAAA+TGG | 0.425648 | 7_3:-43939559 | None:intergenic |
| GGAGGTTATGAAGGAGGCAG+AGG | 0.426160 | 7_3:+43943801 | Msa1105460:CDS |
| GGGGAGGTCGAGGCAGAGGT+TGG | 0.431992 | 7_3:+43943205 | Msa1105460:CDS |
| GGTAGGAATTGGGGAAGGGG+TGG | 0.434417 | 7_3:+43942978 | Msa1105460:CDS |
| GGCAGGGGTGGAGGTTATGG+AGG | 0.435134 | 7_3:+43943675 | Msa1105460:CDS |
| GGAGGTTATGAAGGTGGTAG+AGG | 0.437789 | 7_3:+43943588 | Msa1105460:CDS |
| TATGAAGGTGGTAGAGGTGG+AGG | 0.441657 | 7_3:+43943594 | Msa1105460:CDS |
| GGAGGCAGAGGTGGAGGGTA+TGG | 0.444048 | 7_3:+43943717 | Msa1105460:CDS |
| TGACAAGGTGATTGAGATCA+TGG | 0.445665 | 7_3:-43942538 | None:intergenic |
| GGTTATGAAGGAGGCAGAGG+TGG | 0.447746 | 7_3:+43943804 | Msa1105460:CDS |
| GGTTACGGTGGCGGCAGAGG+TGG | 0.448266 | 7_3:+43943567 | Msa1105460:CDS |
| AACCTTCTGGTACCTGTCCA+TGG | 0.450777 | 7_3:-43939602 | None:intergenic |
| GGCAGAGGTGGAGGATATGG+AGG | 0.452442 | 7_3:+43943744 | Msa1105460:CDS |
| GTTGATGGGAGTTTCAGGTT+TGG | 0.453613 | 7_3:-43939632 | None:intergenic |
| TATGAAGGAGGCAGAGGTGG+AGG | 0.457131 | 7_3:+43943783 | Msa1105460:CDS |
| AGAGGGAGAGGTAGGAATTG+GGG | 0.457224 | 7_3:+43942969 | Msa1105460:CDS |
| AGGAGGCAGAGGTGGAGGAA+TGG | 0.458248 | 7_3:+43943812 | Msa1105460:CDS |
| GAGGTCGAGGCAGAGGTTGG+GGG | 0.460450 | 7_3:+43943208 | Msa1105460:CDS |
| ACACCCATTGCTATCATGCC+TGG | 0.462592 | 7_3:-43943980 | None:intergenic |
| GGAAATTATCAAGGTGGATA+CGG | 0.462645 | 7_3:+43943023 | Msa1105460:CDS |
| AGAGGTGGAGGTGGTTATGA+AGG | 0.463581 | 7_3:+43943606 | Msa1105460:CDS |
| TGTTCATCTTTAGATTTAGC+TGG | 0.463992 | 7_3:+43944139 | Msa1105460:three_prime_UTR |
| TTGCAGTATCTTGGTGCAAA+GGG | 0.465007 | 7_3:-43942342 | None:intergenic |
| AGGAGGCAGAGGTGGAGGTA+TGG | 0.467630 | 7_3:+43943875 | Msa1105460:CDS |
| TATGGCTATCAAGGTGGGTA+TGG | 0.468309 | 7_3:+43943002 | Msa1105460:CDS |
| CTGAGCTGATTGCAGTATCT+TGG | 0.471182 | 7_3:-43942351 | None:intergenic |
| AGCAAAAGAGATTGTCTTGA+AGG | 0.471497 | 7_3:+43942000 | Msa1105460:CDS |
| GGTGGTTATGAAGGTGGCAG+AGG | 0.471529 | 7_3:+43943615 | Msa1105460:CDS |
| GCAGGGGATATGGCCGTGGT+AGG | 0.471829 | 7_3:+43943919 | Msa1105460:CDS |
| GACTCGTATGGCCGAGGTCG+TGG | 0.474535 | 7_3:+43942939 | Msa1105460:intron |
| GGAGGGTACGAAGGAGGCAG+AGG | 0.475761 | 7_3:+43943705 | Msa1105460:CDS |
| GAGATTGTCTTGAAGGCAAT+GGG | 0.476181 | 7_3:+43942007 | Msa1105460:CDS |
| GTAGGAGGCAGAGGTGGAGG+TGG | 0.476299 | 7_3:+43943840 | Msa1105460:CDS |
| TGAAAGAGGCAGGGGAGGCA+GGG | 0.477286 | 7_3:+43943902 | Msa1105460:CDS |
| TTTCTCTCTCTGCCATGGAC+AGG | 0.477643 | 7_3:+43939590 | Msa1105460:exon |
| ATGGATGGACGTGGTGGTAG+AGG | 0.477718 | 7_3:+43943948 | Msa1105460:CDS |
| GGTTATGAAGGAGGCAGAGG+TGG | 0.478456 | 7_3:+43943780 | Msa1105460:CDS |
| GGAGGCAGAGGTGGAGGTAT+GGG | 0.480716 | 7_3:+43943876 | Msa1105460:CDS |
| GTGGAGGTTATGAAGGTGGC+AGG | 0.481847 | 7_3:+43943658 | Msa1105460:CDS |
| TCTTATAATGCTGTAAATGA+AGG | 0.481848 | 7_3:+43942839 | Msa1105460:CDS |
| GGTGGTTATGAAGGAGGCAG+AGG | 0.483538 | 7_3:+43943777 | Msa1105460:CDS |
| GGAGGCAGGGGATATGGCCG+TGG | 0.483577 | 7_3:+43943915 | Msa1105460:CDS |
| TAACCTTAAAACCCTAGAAA+AGG | 0.486941 | 7_3:-43939527 | None:intergenic |
| GTATGGGTTATGAAAGAGGC+AGG | 0.487261 | 7_3:+43943892 | Msa1105460:CDS |
| ACCTCTTTCTCTCTCTGCCA+TGG | 0.489795 | 7_3:+43939585 | Msa1105460:exon |
| AGAGGTGGAGGGTATGGTGG+AGG | 0.489831 | 7_3:+43943723 | Msa1105460:CDS |
| GAATTGAACACAAATTCTCC+TGG | 0.491912 | 7_3:+43942567 | Msa1105460:CDS |
| GGTCGTGGTGGAGGTTATGA+AGG | 0.492926 | 7_3:+43943651 | Msa1105460:CDS |
| TATGAAGGTGGTCGTGGTGG+AGG | 0.494891 | 7_3:+43943642 | Msa1105460:CDS |
| GGGTACGAAGGAGGCAGAGG+TGG | 0.495025 | 7_3:+43943708 | Msa1105460:CDS |
| GGGTATTCTAATCGTGGCCG+AGG | 0.495644 | 7_3:+43943183 | Msa1105460:CDS |
| GGATATGGAGGAGGCAGAGG+TGG | 0.495944 | 7_3:+43943756 | Msa1105460:CDS |
| GAGAAAGAGGTAGAGAGAGA+AGG | 0.496050 | 7_3:-43939573 | None:intergenic |
| TGGCCGTGGTAGGGGAAGAA+TGG | 0.496897 | 7_3:+43943929 | Msa1105460:CDS |
| TACGAAGGAGGCAGAGGTGG+AGG | 0.500034 | 7_3:+43943870 | Msa1105460:CDS |
| GGTTATGAAGGTGGTAGAGG+TGG | 0.500241 | 7_3:+43943591 | Msa1105460:CDS |
| GGTGGCAGAGGTGGCTATGA+AGG | 0.502655 | 7_3:+43943627 | Msa1105460:CDS |
| GATAATTTGCATATCCACCT+TGG | 0.504702 | 7_3:-43943052 | None:intergenic |
| GAAAGAGGCAGGGGAGGCAG+GGG | 0.505244 | 7_3:+43943903 | Msa1105460:CDS |
| GAGAGGTAGGAATTGGGGAA+GGG | 0.510893 | 7_3:+43942974 | Msa1105460:CDS |
| GGTGGATATGCAAATTATCA+AGG | 0.512065 | 7_3:+43943056 | Msa1105460:CDS |
| TGGAGGTTATGAAGGTGGCA+GGG | 0.512822 | 7_3:+43943659 | Msa1105460:CDS |
| GGTGGAGGTTATGGAGGCAG+AGG | 0.517048 | 7_3:+43943681 | Msa1105460:CDS |
| GGCAGAGGTGGAGGTTATGA+AGG | 0.517385 | 7_3:+43943579 | Msa1105460:CDS |
| GGAGAGGTAGGAATTGGGGA+AGG | 0.518873 | 7_3:+43942973 | Msa1105460:CDS |
| GGTATTCTAATCGTGGCCGA+GGG | 0.520710 | 7_3:+43943184 | Msa1105460:CDS |
| TCATGAAACTGATTTGGGCA+AGG | 0.522891 | 7_3:+43944113 | Msa1105460:three_prime_UTR |
| GGAGGTATGGGTTATGAAAG+AGG | 0.523038 | 7_3:+43943888 | Msa1105460:CDS |
| CGTGGTCGAGGTAGAGGGAG+AGG | 0.524222 | 7_3:+43942957 | Msa1105460:CDS |
| AAACCAGGCATGATAGCAAT+GGG | 0.524237 | 7_3:+43943977 | Msa1105460:exon |
| GGTACAAGACCCTCTTCAAT+GGG | 0.524827 | 7_3:-43942397 | None:intergenic |
| GCATTATAAGAATCCTGTGC+TGG | 0.525963 | 7_3:-43942827 | None:intergenic |
| ATGGGTTACGAAGGAGGCAG+AGG | 0.532052 | 7_3:+43943864 | Msa1105460:CDS |
| GGTGGAGGTGGTTATGAAGG+TGG | 0.535779 | 7_3:+43943609 | Msa1105460:CDS |
| ATGGGTTATGAAAGAGGCAG+GGG | 0.536952 | 7_3:+43943894 | Msa1105460:CDS |
| TATGGCCGAGGTCGTGGTCG+AGG | 0.538984 | 7_3:+43942945 | Msa1105460:CDS |
| GAATCCTGTGCTGGTTTCAG+AGG | 0.539391 | 7_3:-43942818 | None:intergenic |
| GGTGGCTATGAAGGTGGTCG+TGG | 0.541622 | 7_3:+43943636 | Msa1105460:CDS |
| GATGGACGTGGTGGTAGAGG+TGG | 0.541630 | 7_3:+43943951 | Msa1105460:CDS |
| GAAAGAGGTAGAGAGAGAAG+GGG | 0.543432 | 7_3:-43939571 | None:intergenic |
| GGCTATGAAGGTGGTCGTGG+TGG | 0.544263 | 7_3:+43943639 | Msa1105460:CDS |
| TCCATGGCAGAGAGAGAAAG+AGG | 0.545152 | 7_3:-43939586 | None:intergenic |
| GGCAGAGGTGGAGGGTACGA+AGG | 0.546349 | 7_3:+43943696 | Msa1105460:CDS |
| AGGGGTGGTTATGGCTATCA+AGG | 0.547547 | 7_3:+43942993 | Msa1105460:CDS |
| ATAACATAACTGCACTGTCA+AGG | 0.550539 | 7_3:-43944029 | None:intergenic |
| GGGAGAGAAATGAATTGGAA+AGG | 0.551529 | 7_3:-43939501 | None:intergenic |
| AGAGATTGTCTTGAAGGCAA+TGG | 0.551588 | 7_3:+43942006 | Msa1105460:CDS |
| CTTAAAACCCTAGAAAAGGA+AGG | 0.553581 | 7_3:-43939523 | None:intergenic |
| GGTGGGTATGGAAATTATCA+AGG | 0.557168 | 7_3:+43943014 | Msa1105460:CDS |
| GGAGAGAAATGAATTGGAAA+GGG | 0.557517 | 7_3:-43939500 | None:intergenic |
| TAACATAACTGCACTGTCAA+GGG | 0.561421 | 7_3:-43944028 | None:intergenic |
| GGTTACGAAGGAGGCAGAGG+TGG | 0.561639 | 7_3:+43943867 | Msa1105460:CDS |
| CGTGGTAGGGGAAGAATGGA+TGG | 0.561990 | 7_3:+43943933 | Msa1105460:CDS |
| TTTCTAGACTCGTATGGCCG+AGG | 0.563458 | 7_3:+43942933 | Msa1105460:intron |
| GTCGAGGTAGAGGGAGAGGT+AGG | 0.564538 | 7_3:+43942961 | Msa1105460:CDS |
| GGTTATGAAGGTGGCAGAGG+TGG | 0.565556 | 7_3:+43943618 | Msa1105460:CDS |
| AGAGGTGGAGGGTACGAAGG+AGG | 0.566762 | 7_3:+43943699 | Msa1105460:CDS |
| TGATAGTATGATGTTGCTCA+TGG | 0.567858 | 7_3:+43944065 | Msa1105460:three_prime_UTR |
| TGGTAGAGGTGGAGAAAACC+AGG | 0.569362 | 7_3:+43943962 | Msa1105460:CDS |
| CAGAAGAAAAGAAAAGAGTG+AGG | 0.572340 | 7_3:+43939460 | Msa1105460:five_prime_UTR |
| TTAAAACCCTAGAAAAGGAA+GGG | 0.574652 | 7_3:-43939522 | None:intergenic |
| GAAGGTGGTAGAGGTGGAGG+TGG | 0.574900 | 7_3:+43943597 | Msa1105460:CDS |
| ATTGCAGTATCTTGGTGCAA+AGG | 0.575004 | 7_3:-43942343 | None:intergenic |
| GGTGGTATGGGTTACGAAGG+AGG | 0.575326 | 7_3:+43943858 | Msa1105460:CDS |
| AAAACCAGGCATGATAGCAA+TGG | 0.579456 | 7_3:+43943976 | Msa1105460:exon |
| TACCTTCAGAATCTCTGCAA+TGG | 0.580155 | 7_3:-43942053 | None:intergenic |
| ACGAAGGAGGCAGAGGTGGA+GGG | 0.581836 | 7_3:+43943712 | Msa1105460:CDS |
| GAGATCCGTATCACTACTCA+AGG | 0.583167 | 7_3:+43939661 | Msa1105460:CDS |
| GTGGTTATGGCTATCAAGGT+GGG | 0.583212 | 7_3:+43942997 | Msa1105460:CDS |
| AGTTAGCATAACAGATGTGT+GGG | 0.583306 | 7_3:+43942372 | Msa1105460:CDS |
| GTTCAATTCTCCAGTTGACA+AGG | 0.584863 | 7_3:-43942553 | None:intergenic |
| TGGCGCCTTGAGTAGTGATA+CGG | 0.584965 | 7_3:-43939666 | None:intergenic |
| GGTTATGAAAGAGGCAGGGG+AGG | 0.585553 | 7_3:+43943897 | Msa1105460:CDS |
| AGAGGTGGAGGATATGGAGG+AGG | 0.586063 | 7_3:+43943747 | Msa1105460:CDS |
| TATGGGTTATGAAAGAGGCA+GGG | 0.586895 | 7_3:+43943893 | Msa1105460:CDS |
| GAGGTCGTGGTCGAGGTAGA+GGG | 0.588127 | 7_3:+43942952 | Msa1105460:CDS |
| TGCTGCTGATAATTGGAGTG+TGG | 0.589124 | 7_3:-43942794 | None:intergenic |
| CTCTACCTCGACCACGACCT+CGG | 0.592109 | 7_3:-43942950 | None:intergenic |
| GGAAGAATGGATGGACGTGG+TGG | 0.593817 | 7_3:+43943942 | Msa1105460:CDS |
| GTGTGGGAGCCCATTGAAGA+GGG | 0.607655 | 7_3:+43942388 | Msa1105460:CDS |
| CGTGGTGGAGGTTATGAAGG+TGG | 0.609599 | 7_3:+43943654 | Msa1105460:CDS |
| CAGTTAGCATAACAGATGTG+TGG | 0.612311 | 7_3:+43942371 | Msa1105460:CDS |
| GTAAGTGATGTAGTTACGAA+TGG | 0.612718 | 7_3:-43939686 | None:intergenic |
| GGTGGATACGGCTATTACCA+AGG | 0.612843 | 7_3:+43943035 | Msa1105460:CDS |
| AGAGGTGGTGGTTATGAAGG+AGG | 0.614413 | 7_3:+43943771 | Msa1105460:CDS |
| GGAGGTGGTATGGGTTACGA+AGG | 0.614581 | 7_3:+43943855 | Msa1105460:CDS |
| GGTGGTTATGGCTATCAAGG+TGG | 0.617759 | 7_3:+43942996 | Msa1105460:CDS |
| AATTGAACACAAATTCTCCT+GGG | 0.623115 | 7_3:+43942568 | Msa1105460:CDS |
| TAAAACCCTAGAAAAGGAAG+GGG | 0.623768 | 7_3:-43939521 | None:intergenic |
| TGTGTGGGAGCCCATTGAAG+AGG | 0.624055 | 7_3:+43942387 | Msa1105460:CDS |
| TGCCATTGCAGAGATTCTGA+AGG | 0.625612 | 7_3:+43942051 | Msa1105460:CDS |
| TGCCATGGACAGGTACCAGA+AGG | 0.626822 | 7_3:+43939600 | Msa1105460:exon |
| GGCAGAGGTGGCTATGAAGG+TGG | 0.627200 | 7_3:+43943630 | Msa1105460:CDS |
| GGTTCCTGACAGATAATGGT+GGG | 0.628649 | 7_3:+43943163 | Msa1105460:intron |
| CATCCATTCTTCCCCTACCA+CGG | 0.628907 | 7_3:-43943932 | None:intergenic |
| GTTATGGAGGCAGAGGTGGA+GGG | 0.630921 | 7_3:+43943688 | Msa1105460:CDS |
| AGAGGTGGAGGTTATGAAGG+AGG | 0.632338 | 7_3:+43943795 | Msa1105460:CDS |
| GCAACCTCTGAAACCAGCAC+AGG | 0.640267 | 7_3:+43942814 | Msa1105460:CDS |
| ATTGACCTGAAGAAGCGAAG+TGG | 0.643111 | 7_3:-43939710 | None:intergenic |
| AGAGGTGGAGGTTATGAAGG+TGG | 0.648731 | 7_3:+43943582 | Msa1105460:CDS |
| GGGTATGGAAATTATCAAGG+TGG | 0.649199 | 7_3:+43943017 | Msa1105460:CDS |
| AGGGGAAGAATGGATGGACG+TGG | 0.649748 | 7_3:+43943939 | Msa1105460:CDS |
| GTATTCTAATCGTGGCCGAG+GGG | 0.653433 | 7_3:+43943185 | Msa1105460:CDS |
| TATTCTAATCGTGGCCGAGG+GGG | 0.657347 | 7_3:+43943186 | Msa1105460:CDS |
| AATGGTGGGTATTCTAATCG+TGG | 0.658725 | 7_3:+43943177 | Msa1105460:CDS |
| ATTGCAGTGTGGAAATGACT+CGG | 0.663461 | 7_3:+43942508 | Msa1105460:intron |
| TGCAGTATCTTGGTGCAAAG+GGG | 0.673020 | 7_3:-43942341 | None:intergenic |
| TGGTTCCTGACAGATAATGG+TGG | 0.678431 | 7_3:+43943162 | Msa1105460:intron |
| GGATACGGCTATTACCAAGG+TGG | 0.753958 | 7_3:+43943038 | Msa1105460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATTATTAAGCAATAT+TGG | + | chr7_3:43940533-43940552 | Msa1105460:intron | 10.0% |
| !! | AAATATTATTAAGCAATATT+GGG | + | chr7_3:43940534-43940553 | Msa1105460:intron | 10.0% |
| !! | AGATTAAAATTATAAAAACT+TGG | - | chr7_3:43941478-43941497 | None:intergenic | 10.0% |
| !! | ATATATATTAAACATGTAAA+AGG | - | chr7_3:43941664-43941683 | None:intergenic | 10.0% |
| !! | AAAAAATTAAAGAACATATA+AGG | - | chr7_3:43942108-43942127 | None:intergenic | 10.0% |
| !!! | CATAATTTTTTTTTCTATTT+GGG | + | chr7_3:43942458-43942477 | Msa1105460:intron | 10.0% |
| !!! | TTAAGTTTTTATTGAAGTTT+TGG | + | chr7_3:43940647-43940666 | Msa1105460:intron | 15.0% |
| !! | ACAATATAATAATAGCTAAA+GGG | - | chr7_3:43941009-43941028 | None:intergenic | 15.0% |
| !! | TACAATATAATAATAGCTAA+AGG | - | chr7_3:43941010-43941029 | None:intergenic | 15.0% |
| !!! | GTTAGTATGATATTTTTTAA+TGG | + | chr7_3:43941053-43941072 | Msa1105460:intron | 15.0% |
| !! | TATTAACAAATAATAGCTAA+AGG | + | chr7_3:43941100-43941119 | Msa1105460:intron | 15.0% |
| !! | ATTAACAAATAATAGCTAAA+GGG | + | chr7_3:43941101-43941120 | Msa1105460:intron | 15.0% |
| !!! | GAATAAAAATGTTTTTTGAA+CGG | - | chr7_3:43941758-43941777 | None:intergenic | 15.0% |
| !!! | AAGTTTTTTATTCTAACTTT+TGG | - | chr7_3:43942238-43942257 | None:intergenic | 15.0% |
| !! | AGAATAAAAAACTTAAAATC+TGG | + | chr7_3:43942244-43942263 | Msa1105460:intron | 15.0% |
| !! | AAAATTTCAAACAAAACTTA+CGG | - | chr7_3:43942421-43942440 | None:intergenic | 15.0% |
| !! | CCAAATAGAAAAAAAAATTA+TGG | - | chr7_3:43942460-43942479 | None:intergenic | 15.0% |
| !!! | CCATAATTTTTTTTTCTATT+TGG | + | chr7_3:43942457-43942476 | Msa1105460:intron | 15.0% |
| !! | TATATTAGCTATTCATTAAT+AGG | + | chr7_3:43942879-43942898 | Msa1105460:intron | 15.0% |
| !!! | AAAGAAAGTATAGATATAAT+AGG | - | chr7_3:43943385-43943404 | None:intergenic | 15.0% |
| !!! | TCAAATTTTTCACATTTTTA+AGG | + | chr7_3:43943543-43943562 | Msa1105460:intron | 15.0% |
| !!! | ATTGTTGATTAATGAAATGA+TGG | + | chr7_3:43939891-43939910 | Msa1105460:intron | 20.0% |
| !!! | TTGTTGATTAATGAAATGAT+GGG | + | chr7_3:43939892-43939911 | Msa1105460:intron | 20.0% |
| !!! | TTTTGTTGTTTTTGTTTTTG+TGG | + | chr7_3:43940048-43940067 | Msa1105460:intron | 20.0% |
| !!! | TTTGTTGTTTTTGTTTTTGT+GGG | + | chr7_3:43940049-43940068 | Msa1105460:intron | 20.0% |
| !! | TAAAAATTCTTGAGCAATAT+TGG | + | chr7_3:43940420-43940439 | Msa1105460:intron | 20.0% |
| !! | AAAAATTCTTGAGCAATATT+GGG | + | chr7_3:43940421-43940440 | Msa1105460:intron | 20.0% |
| !! | AAATTGGAGATGTTAAAATT+AGG | + | chr7_3:43940557-43940576 | Msa1105460:intron | 20.0% |
| !! | TACTGAAATAATAATCCATT+AGG | - | chr7_3:43940709-43940728 | None:intergenic | 20.0% |
| !!! | TTGTAAGTTGAAACAAAATT+TGG | + | chr7_3:43940924-43940943 | Msa1105460:intron | 20.0% |
| !! | AAAACTACTAAATCACTTTA+AGG | + | chr7_3:43940956-43940975 | Msa1105460:intron | 20.0% |
| !! | AAACTACTAAATCACTTTAA+GGG | + | chr7_3:43940957-43940976 | Msa1105460:intron | 20.0% |
| !!! | ATGATATTTTTTAATGGTCT+CGG | + | chr7_3:43941059-43941078 | Msa1105460:intron | 20.0% |
| !!! | TAAAGGGTGTTATTTTTTAA+TGG | + | chr7_3:43941117-43941136 | Msa1105460:intron | 20.0% |
| !! | GTCAGAAAAATTGAAAATTA+TGG | - | chr7_3:43941508-43941527 | None:intergenic | 20.0% |
| !!! | ATTTTTCTGACTTCAATATA+TGG | + | chr7_3:43941517-43941536 | Msa1105460:intron | 20.0% |
| !! | TGAAACTAATGTTTAAATTC+AGG | + | chr7_3:43941568-43941587 | Msa1105460:intron | 20.0% |
| !! | TATTAAACATGTAAAAGGAA+CGG | - | chr7_3:43941659-43941678 | None:intergenic | 20.0% |
| !!! | AAACATTTTTATTCTTACTG+TGG | + | chr7_3:43941764-43941783 | Msa1105460:intron | 20.0% |
| !!! | TAATTTCAGGTAAATGAAAT+AGG | - | chr7_3:43941871-43941890 | None:intergenic | 20.0% |
| !! | AATTATCTTACTGCAAAAAT+AGG | - | chr7_3:43941897-43941916 | None:intergenic | 20.0% |
| !! | GATAATTCAAATACTGTAAT+TGG | + | chr7_3:43941910-43941929 | Msa1105460:intron | 20.0% |
| !! | AAATACAAAACGTTATAAGA+TGG | - | chr7_3:43941965-43941984 | None:intergenic | 20.0% |
| !! | AAATTAAAGAACATATAAGG+AGG | - | chr7_3:43942105-43942124 | None:intergenic | 20.0% |
| !!! | AATTTTTTTTTCTATTTGGG+TGG | + | chr7_3:43942461-43942480 | Msa1105460:intron | 20.0% |
| !! | CAAGATCATGAAAATAATTA+CGG | - | chr7_3:43942600-43942619 | None:intergenic | 20.0% |
| !! | TTCATTATCATCAGATAATA+CGG | - | chr7_3:43943270-43943289 | None:intergenic | 20.0% |
| !!! | AATTTTTCACATTTTTAAGG+TGG | + | chr7_3:43943546-43943565 | Msa1105460:intron | 20.0% |
| !! | GAGAAAAAAAACATAAATGA+TGG | - | chr7_3:43944092-43944111 | None:intergenic | 20.0% |
| !!! | TAGGGTTTTAAGGTTATTTA+GGG | + | chr7_3:43939534-43939553 | Msa1105460:five_prime_UTR | 25.0% |
| !! | TGTTGATGTTATTTAGAACT+TGG | + | chr7_3:43939973-43939992 | Msa1105460:intron | 25.0% |
| ! | CTGTTTATCAAATTAAAGCA+CGG | - | chr7_3:43940339-43940358 | None:intergenic | 25.0% |
| ! | ATTTGATAAACAGTTCAACA+CGG | + | chr7_3:43940346-43940365 | Msa1105460:intron | 25.0% |
| ! | ATTAAGCAATATTGGGAAAT+TGG | + | chr7_3:43940541-43940560 | Msa1105460:intron | 25.0% |
| ! | AAACAATGCCTATGTTTAAA+AGG | + | chr7_3:43940737-43940756 | Msa1105460:intron | 25.0% |
| ! | AACAATGCCTATGTTTAAAA+GGG | + | chr7_3:43940738-43940757 | Msa1105460:intron | 25.0% |
| !! | CATATATCCCTTTTAAACAT+AGG | - | chr7_3:43940748-43940767 | None:intergenic | 25.0% |
| ! | AACTACTAAATCACTTTAAG+GGG | + | chr7_3:43940958-43940977 | Msa1105460:intron | 25.0% |
| ! | TCTTCTTTACAATAGATACT+AGG | + | chr7_3:43941148-43941167 | Msa1105460:intron | 25.0% |
| ! | CTTCTTTACAATAGATACTA+GGG | + | chr7_3:43941149-43941168 | Msa1105460:intron | 25.0% |
| ! | ATTAAACATGTAAAAGGAAC+GGG | - | chr7_3:43941658-43941677 | None:intergenic | 25.0% |
| !!! | ATTTTAATGACAAACTCAAG+TGG | - | chr7_3:43941817-43941836 | None:intergenic | 25.0% |
| ! | CAAAAATAGGTGATAATTTC+AGG | - | chr7_3:43941884-43941903 | None:intergenic | 25.0% |
| ! | GAAGGTAACTTGAAAATAAT+TGG | + | chr7_3:43942160-43942179 | Msa1105460:intron | 25.0% |
| ! | AACTTGAAAATAATTGGCAA+TGG | + | chr7_3:43942166-43942185 | Msa1105460:intron | 25.0% |
| ! | ACCTTTAGATTTATTGAAGA+GGG | - | chr7_3:43942212-43942231 | None:intergenic | 25.0% |
| ! | AACCTTTAGATTTATTGAAG+AGG | - | chr7_3:43942213-43942232 | None:intergenic | 25.0% |
| !!! | TCATATTGATTTTCTGTGAT+TGG | + | chr7_3:43942288-43942307 | Msa1105460:intron | 25.0% |
| !!! | TGTTTGAAATTTTAACGTTC+TGG | + | chr7_3:43942428-43942447 | Msa1105460:intron | 25.0% |
| ! | ATTGTTGATATTCAACAACT+TGG | - | chr7_3:43942487-43942506 | None:intergenic | 25.0% |
| !! | TTACGTTCTTTTTATTCAGT+TGG | + | chr7_3:43942621-43942640 | Msa1105460:intron | 25.0% |
| !!! | TTATATTTTGAATCCATTCC+TGG | + | chr7_3:43942692-43942711 | Msa1105460:intron | 25.0% |
| ! | GTCTATATGATTTCATGTTT+AGG | + | chr7_3:43942738-43942757 | Msa1105460:intron | 25.0% |
| ! | TCTTATAATGCTGTAAATGA+AGG | + | chr7_3:43942839-43942858 | Msa1105460:CDS | 25.0% |
| ! | TCATTATCATCAGATAATAC+GGG | - | chr7_3:43943269-43943288 | None:intergenic | 25.0% |
| !! | CTATACTTTCTTTTCTATTC+TGG | + | chr7_3:43943392-43943411 | Msa1105460:intron | 25.0% |
| !! | AGTTTTCCATATTTGATTGA+TGG | - | chr7_3:43943471-43943490 | None:intergenic | 25.0% |
| !!! | AACTGTTTTTGTATTTGTGA+AGG | + | chr7_3:43943487-43943506 | Msa1105460:intron | 25.0% |
| !! | GTAATTCATTACACCTTTTA+TGG | + | chr7_3:43944190-43944209 | Msa1105460:three_prime_UTR | 25.0% |
| ! | TACAGATAAAAATATGGTGT+TGG | - | chr7_3:43944219-43944238 | None:intergenic | 25.0% |
| !!! | ACCATATTTTTATCTGTATC+TGG | + | chr7_3:43944221-43944240 | Msa1105460:three_prime_UTR | 25.0% |
| ! | ACCAGATACAGATAAAAATA+TGG | - | chr7_3:43944225-43944244 | None:intergenic | 25.0% |
| ! | AAAGAAAAGAGTGAGGTTTT+AGG | + | chr7_3:43939467-43939486 | Msa1105460:five_prime_UTR | 30.0% |
| TTAAAACCCTAGAAAAGGAA+GGG | - | chr7_3:43939525-43939544 | None:intergenic | 30.0% | |
| TAACCTTAAAACCCTAGAAA+AGG | - | chr7_3:43939530-43939549 | None:intergenic | 30.0% | |
| !!! | CTAGGGTTTTAAGGTTATTT+AGG | + | chr7_3:43939533-43939552 | Msa1105460:five_prime_UTR | 30.0% |
| ! | ATTCACCATGTTTTCGTTTT+TGG | + | chr7_3:43939766-43939785 | Msa1105460:intron | 30.0% |
| !! | TTCACCATGTTTTCGTTTTT+GGG | + | chr7_3:43939767-43939786 | Msa1105460:intron | 30.0% |
| !! | GTGGCATTTTAAGAAATGTT+TGG | + | chr7_3:43939815-43939834 | Msa1105460:intron | 30.0% |
| ! | TGTTATTTAGAACTTGGTAG+TGG | + | chr7_3:43939979-43939998 | Msa1105460:intron | 30.0% |
| CAGGTAAAAATTTGGGAAAA+TGG | - | chr7_3:43940188-43940207 | None:intergenic | 30.0% | |
| GTCAACACAGGTAAAAATTT+GGG | - | chr7_3:43940195-43940214 | None:intergenic | 30.0% | |
| !!! | TAACTTTTTGGAATCTACTC+AGG | + | chr7_3:43940278-43940297 | Msa1105460:intron | 30.0% |
| ! | TACTCAGGTTTCGTTTATTT+TGG | + | chr7_3:43940293-43940312 | Msa1105460:intron | 30.0% |
| !! | ACTCAGGTTTCGTTTATTTT+GGG | + | chr7_3:43940294-43940313 | Msa1105460:intron | 30.0% |
| TCATACTAAACGCAATAATG+TGG | + | chr7_3:43940372-43940391 | Msa1105460:intron | 30.0% | |
| GAATGTATCAGATTAAAGCA+TGG | + | chr7_3:43940488-43940507 | Msa1105460:intron | 30.0% | |
| !!! | GAAGTTTTGGTTCTCAAATA+TGG | + | chr7_3:43940660-43940679 | Msa1105460:intron | 30.0% |
| ATACGAAGTTACAAACCTAA+TGG | + | chr7_3:43940691-43940710 | Msa1105460:intron | 30.0% | |
| ! | AAAAGTTTTTACTCTTGCGT+TGG | + | chr7_3:43941275-43941294 | Msa1105460:intron | 30.0% |
| AAATGGTTATGGGAGTTTAT+TGG | - | chr7_3:43941370-43941389 | None:intergenic | 30.0% | |
| AATAAACTCCCATAACCATT+TGG | + | chr7_3:43941369-43941388 | Msa1105460:intron | 30.0% | |
| CTGAATTACCAAATGGTTAT+GGG | - | chr7_3:43941380-43941399 | None:intergenic | 30.0% | |
| ACTGAATTACCAAATGGTTA+TGG | - | chr7_3:43941381-43941400 | None:intergenic | 30.0% | |
| ! | TAACCATTTGGTAATTCAGT+AGG | + | chr7_3:43941381-43941400 | Msa1105460:intron | 30.0% |
| TATCCTACTGAATTACCAAA+TGG | - | chr7_3:43941387-43941406 | None:intergenic | 30.0% | |
| TTCAGGTAAATGAAATAGGA+GGG | - | chr7_3:43941867-43941886 | None:intergenic | 30.0% | |
| ! | TTTCAGGTAAATGAAATAGG+AGG | - | chr7_3:43941868-43941887 | None:intergenic | 30.0% |
| ! | TAACGTTTTGTATTTCATCC+AGG | + | chr7_3:43941970-43941989 | Msa1105460:intron | 30.0% |
| TCCCTCTTCAATAAATCTAA+AGG | + | chr7_3:43942208-43942227 | Msa1105460:intron | 30.0% | |
| TATCAACAATTATTGCAGTG+TGG | + | chr7_3:43942497-43942516 | Msa1105460:intron | 30.0% | |
| AATTGAACACAAATTCTCCT+GGG | + | chr7_3:43942568-43942587 | Msa1105460:CDS | 30.0% | |
| ! | TTCTTGTTATAACAGCTTCT+TGG | + | chr7_3:43942649-43942668 | Msa1105460:intron | 30.0% |
| ! | TCTTGTTATAACAGCTTCTT+GGG | + | chr7_3:43942650-43942669 | Msa1105460:intron | 30.0% |
| AAATACTAGTCAAACAATCC+AGG | - | chr7_3:43942713-43942732 | None:intergenic | 30.0% | |
| AGATGTGCTAAAAGTTAGAA+TGG | - | chr7_3:43942905-43942924 | None:intergenic | 30.0% | |
| ! | TATCTTTTTCTAGACTCGTA+TGG | + | chr7_3:43942927-43942946 | Msa1105460:intron | 30.0% |
| GTACTATAATGCTAAAATCC+AGG | - | chr7_3:43943096-43943115 | None:intergenic | 30.0% | |
| !! | AAGTTTACTTTTGTTGTGCT+TGG | + | chr7_3:43943142-43943161 | Msa1105460:intron | 30.0% |
| ! | TGATGATAATGAATGTCTTC+AGG | + | chr7_3:43943277-43943296 | Msa1105460:intron | 30.0% |
| ! | TACTTTCTTTTCTATTCTGG+AGG | + | chr7_3:43943395-43943414 | Msa1105460:intron | 30.0% |
| TATGCTCCATCAATCAAATA+TGG | + | chr7_3:43943462-43943481 | Msa1105460:intron | 30.0% | |
| GCTTATGATCAGATTAAACA+TGG | - | chr7_3:43943517-43943536 | None:intergenic | 30.0% | |
| !!! | TCACATTTTTAAGGTGGTTA+CGG | + | chr7_3:43943552-43943571 | Msa1105460:intron | 30.0% |
| TTCTCTTCATGAAACTGATT+TGG | + | chr7_3:43944107-43944126 | Msa1105460:three_prime_UTR | 30.0% | |
| ! | TCTCTTCATGAAACTGATTT+GGG | + | chr7_3:43944108-43944127 | Msa1105460:three_prime_UTR | 30.0% |
| TGTTCATCTTTAGATTTAGC+TGG | + | chr7_3:43944139-43944158 | Msa1105460:three_prime_UTR | 30.0% | |
| ! | ATCTGTATCTGGTTTCTATA+TGG | + | chr7_3:43944232-43944251 | Msa1105460:three_prime_UTR | 30.0% |
| CAGAAGAAAAGAAAAGAGTG+AGG | + | chr7_3:43939460-43939479 | Msa1105460:five_prime_UTR | 35.0% | |
| GGAGAGAAATGAATTGGAAA+GGG | - | chr7_3:43939503-43939522 | None:intergenic | 35.0% | |
| TAAAACCCTAGAAAAGGAAG+GGG | - | chr7_3:43939524-43939543 | None:intergenic | 35.0% | |
| CTTAAAACCCTAGAAAAGGA+AGG | - | chr7_3:43939526-43939545 | None:intergenic | 35.0% | |
| !!! | CTTCCTTTTCTAGGGTTTTA+AGG | + | chr7_3:43939524-43939543 | Msa1105460:five_prime_UTR | 35.0% |
| GTAAGTGATGTAGTTACGAA+TGG | - | chr7_3:43939689-43939708 | None:intergenic | 35.0% | |
| !!! | TGATTGTGGTTGTTTTTGTG+TGG | + | chr7_3:43939796-43939815 | Msa1105460:intron | 35.0% |
| TTGAATCTTGTCAGCATTTC+TGG | + | chr7_3:43940078-43940097 | Msa1105460:intron | 35.0% | |
| CGTCAACACAGGTAAAAATT+TGG | - | chr7_3:43940196-43940215 | None:intergenic | 35.0% | |
| GTAAGTCGTATGTCTGTTAT+GGG | + | chr7_3:43940254-43940273 | Msa1105460:intron | 35.0% | |
| TAAGTCGTATGTCTGTTATG+GGG | + | chr7_3:43940255-43940274 | Msa1105460:intron | 35.0% | |
| ! | TCTGTTATGGGGTAACTTTT+TGG | + | chr7_3:43940266-43940285 | Msa1105460:intron | 35.0% |
| !!! | CTCAGGTTTCGTTTATTTTG+GGG | + | chr7_3:43940295-43940314 | Msa1105460:intron | 35.0% |
| ACTAAACGCAATAATGTGGA+TGG | + | chr7_3:43940376-43940395 | Msa1105460:intron | 35.0% | |
| ATCTGATACACAGTTCAACA+TGG | - | chr7_3:43940459-43940478 | None:intergenic | 35.0% | |
| CTGTGTATCAGATTAAAGCA+CGG | + | chr7_3:43940466-43940485 | Msa1105460:intron | 35.0% | |
| ! | AAGGAGGTAAAAAGGTACAA+GGG | - | chr7_3:43940848-43940867 | None:intergenic | 35.0% |
| ! | AAAGGAGGTAAAAAGGTACA+AGG | - | chr7_3:43940849-43940868 | None:intergenic | 35.0% |
| ATACTACAACACAGAAGGAA+AGG | - | chr7_3:43940867-43940886 | None:intergenic | 35.0% | |
| !! | TTGTAGTATGTGTGTTGGTT+AGG | + | chr7_3:43940878-43940897 | Msa1105460:intron | 35.0% |
| !! | TGTAGTATGTGTGTTGGTTA+GGG | + | chr7_3:43940879-43940898 | Msa1105460:intron | 35.0% |
| ! | GGTTAGGGTTTTCTTTAGTT+AGG | + | chr7_3:43940894-43940913 | Msa1105460:intron | 35.0% |
| ! | ACTAAATCACTTTAAGGGGT+TGG | + | chr7_3:43940962-43940981 | Msa1105460:intron | 35.0% |
| AGCAAAAGAGATTGTCTTGA+AGG | + | chr7_3:43942000-43942019 | Msa1105460:CDS | 35.0% | |
| TCTGAAGGTAATTTCTTTGC+AGG | + | chr7_3:43942066-43942085 | Msa1105460:intron | 35.0% | |
| !! | TAGCATATGTTTCTGGTAGA+AGG | + | chr7_3:43942142-43942161 | Msa1105460:intron | 35.0% |
| TCAATCTGCTTAAACAGAAG+AGG | + | chr7_3:43942314-43942333 | Msa1105460:intron | 35.0% | |
| AGTTAGCATAACAGATGTGT+GGG | + | chr7_3:43942372-43942391 | Msa1105460:CDS | 35.0% | |
| GAATTGAACACAAATTCTCC+TGG | + | chr7_3:43942567-43942586 | Msa1105460:CDS | 35.0% | |
| ! | CTTGTTATAACAGCTTCTTG+GGG | + | chr7_3:43942651-43942670 | Msa1105460:intron | 35.0% |
| TTTGATTGTTCAGCAGTAGA+TGG | - | chr7_3:43942773-43942792 | None:intergenic | 35.0% | |
| GGAAATTATCAAGGTGGATA+CGG | + | chr7_3:43943023-43943042 | Msa1105460:CDS | 35.0% | |
| ! | GATAATTTGCATATCCACCT+TGG | - | chr7_3:43943055-43943074 | None:intergenic | 35.0% |
| GGTGGATATGCAAATTATCA+AGG | + | chr7_3:43943056-43943075 | Msa1105460:CDS | 35.0% | |
| AAGGTACAAATTCTGAATCC+TGG | + | chr7_3:43943075-43943094 | Msa1105460:intron | 35.0% | |
| TTATCATCAGATAATACGGG+AGG | - | chr7_3:43943266-43943285 | None:intergenic | 35.0% | |
| ATAAACTCAGGAAACCATCT+TGG | - | chr7_3:43943322-43943341 | None:intergenic | 35.0% | |
| TAACATAACTGCACTGTCAA+GGG | - | chr7_3:43944031-43944050 | None:intergenic | 35.0% | |
| ATAACATAACTGCACTGTCA+AGG | - | chr7_3:43944032-43944051 | None:intergenic | 35.0% | |
| TGATAGTATGATGTTGCTCA+TGG | + | chr7_3:43944065-43944084 | Msa1105460:three_prime_UTR | 35.0% | |
| !! | TTAGCTGGAAAAAGCATCTT+TGG | + | chr7_3:43944154-43944173 | Msa1105460:three_prime_UTR | 35.0% |
| ! | GTTTTGTGTACACTAGAAAG+TGG | + | chr7_3:43944326-43944345 | Msa1105460:three_prime_UTR | 35.0% |
| GGGAGAGAAATGAATTGGAA+AGG | - | chr7_3:43939504-43939523 | None:intergenic | 40.0% | |
| GAGAGAAGGGGAAAATGAAA+TGG | - | chr7_3:43939562-43939581 | None:intergenic | 40.0% | |
| AGAAAGAGGTAGAGAGAGAA+GGG | - | chr7_3:43939575-43939594 | None:intergenic | 40.0% | |
| !! | GTTTGGGTTTTTCAACCTTC+TGG | - | chr7_3:43939618-43939637 | None:intergenic | 40.0% |
| !! | TTGATGGGAGTTTCAGGTTT+GGG | - | chr7_3:43939634-43939653 | None:intergenic | 40.0% |
| !! | TTTTCGTTGATGGGAGTTTC+AGG | - | chr7_3:43939640-43939659 | None:intergenic | 40.0% |
| ! | CGGATCTCATTTTCGTTGAT+GGG | - | chr7_3:43939649-43939668 | None:intergenic | 40.0% |
| ! | ACGGATCTCATTTTCGTTGA+TGG | - | chr7_3:43939650-43939669 | None:intergenic | 40.0% |
| GCAACCCAAAAACGAAAACA+TGG | - | chr7_3:43939774-43939793 | None:intergenic | 40.0% | |
| !!! | TTTTTGGGTTGCGTTGATTG+TGG | + | chr7_3:43939782-43939801 | Msa1105460:intron | 40.0% |
| CGTAAGTCGTATGTCTGTTA+TGG | + | chr7_3:43940253-43940272 | Msa1105460:intron | 40.0% | |
| GGATGGAGATGAACATTGTT+AGG | + | chr7_3:43940393-43940412 | Msa1105460:intron | 40.0% | |
| CAGAAGGAAAGGAGGTAAAA+AGG | - | chr7_3:43940856-43940875 | None:intergenic | 40.0% | |
| CACACATACTACAACACAGA+AGG | - | chr7_3:43940872-43940891 | None:intergenic | 40.0% | |
| CTGTGTTGTAGTATGTGTGT+TGG | + | chr7_3:43940873-43940892 | Msa1105460:intron | 40.0% | |
| TAGCTACAGTACCTTACACA+CGG | + | chr7_3:43941179-43941198 | Msa1105460:intron | 40.0% | |
| TACCTTACACACGGTTCAAA+CGG | + | chr7_3:43941188-43941207 | Msa1105460:intron | 40.0% | |
| AGAGCTACAAAAGAATGGCA+TGG | - | chr7_3:43941426-43941445 | None:intergenic | 40.0% | |
| GCTGAAGAGCTACAAAAGAA+TGG | - | chr7_3:43941431-43941450 | None:intergenic | 40.0% | |
| TAGGAGGGACAAAATGTGAT+CGG | - | chr7_3:43941852-43941871 | None:intergenic | 40.0% | |
| ATACTGTAATTGGCACGTGT+TGG | + | chr7_3:43941920-43941939 | Msa1105460:intron | 40.0% | |
| CACGTGTTGGAAACTATTTC+TGG | + | chr7_3:43941933-43941952 | Msa1105460:intron | 40.0% | |
| !! | TCTCTTTTGCTTGCTTTTCC+TGG | - | chr7_3:43941991-43942010 | None:intergenic | 40.0% |
| AGAGATTGTCTTGAAGGCAA+TGG | + | chr7_3:43942006-43942025 | Msa1105460:CDS | 40.0% | |
| GAGATTGTCTTGAAGGCAAT+GGG | + | chr7_3:43942007-43942026 | Msa1105460:CDS | 40.0% | |
| TACCTTCAGAATCTCTGCAA+TGG | - | chr7_3:43942056-43942075 | None:intergenic | 40.0% | |
| GACAGTCTAGCATATGTTTC+TGG | + | chr7_3:43942135-43942154 | Msa1105460:intron | 40.0% | |
| ! | TTGCAGTATCTTGGTGCAAA+GGG | - | chr7_3:43942345-43942364 | None:intergenic | 40.0% |
| ! | ATTGCAGTATCTTGGTGCAA+AGG | - | chr7_3:43942346-43942365 | None:intergenic | 40.0% |
| CAGTTAGCATAACAGATGTG+TGG | + | chr7_3:43942371-43942390 | Msa1105460:CDS | 40.0% | |
| ATTGCAGTGTGGAAATGACT+CGG | + | chr7_3:43942508-43942527 | Msa1105460:intron | 40.0% | |
| TGACAAGGTGATTGAGATCA+TGG | - | chr7_3:43942541-43942560 | None:intergenic | 40.0% | |
| ATCTCAATCACCTTGTCAAC+TGG | + | chr7_3:43942543-43942562 | Msa1105460:CDS | 40.0% | |
| GTTCAATTCTCCAGTTGACA+AGG | - | chr7_3:43942556-43942575 | None:intergenic | 40.0% | |
| AATAATTACGGAACTCACCC+AGG | - | chr7_3:43942588-43942607 | None:intergenic | 40.0% | |
| TTATAACAGCTTCTTGGGGA+GGG | + | chr7_3:43942655-43942674 | Msa1105460:intron | 40.0% | |
| TGGGGAGGGAAAAAAATTGA+AGG | + | chr7_3:43942669-43942688 | Msa1105460:intron | 40.0% | |
| CTAGTCAAACAATCCAGGAA+TGG | - | chr7_3:43942708-43942727 | None:intergenic | 40.0% | |
| GCATTATAAGAATCCTGTGC+TGG | - | chr7_3:43942830-43942849 | None:intergenic | 40.0% | |
| GGTGGGTATGGAAATTATCA+AGG | + | chr7_3:43943014-43943033 | Msa1105460:CDS | 40.0% | |
| GGGTATGGAAATTATCAAGG+TGG | + | chr7_3:43943017-43943036 | Msa1105460:CDS | 40.0% | |
| AATACCCACCATTATCTGTC+AGG | - | chr7_3:43943170-43943189 | None:intergenic | 40.0% | |
| !! | AATGGTGGGTATTCTAATCG+TGG | + | chr7_3:43943177-43943196 | Msa1105460:CDS | 40.0% |
| !! | CTCTGTCTTTTTCACCAAGA+TGG | + | chr7_3:43943305-43943324 | Msa1105460:intron | 40.0% |
| ! | ACAGATGAGAGCATAAACTC+AGG | - | chr7_3:43943334-43943353 | None:intergenic | 40.0% |
| !!! | CATTTTTAAGGTGGTTACGG+TGG | + | chr7_3:43943555-43943574 | Msa1105460:intron | 40.0% |
| ! | TATGGGTTATGAAAGAGGCA+GGG | + | chr7_3:43943893-43943912 | Msa1105460:CDS | 40.0% |
| AAAACCAGGCATGATAGCAA+TGG | + | chr7_3:43943976-43943995 | Msa1105460:exon | 40.0% | |
| AAACCAGGCATGATAGCAAT+GGG | + | chr7_3:43943977-43943996 | Msa1105460:exon | 40.0% | |
| !! | TCATGAAACTGATTTGGGCA+AGG | + | chr7_3:43944113-43944132 | Msa1105460:three_prime_UTR | 40.0% |
| !! | ATGGTGTTGGCAACCATAAA+AGG | - | chr7_3:43944206-43944225 | None:intergenic | 40.0% |
| GGAAGGGGAGAGAAATGAAT+TGG | - | chr7_3:43939509-43939528 | None:intergenic | 45.0% | |
| ! | TTCTCTCCCCTTCCTTTTCT+AGG | + | chr7_3:43939515-43939534 | Msa1105460:five_prime_UTR | 45.0% |
| ! | TCTCTCCCCTTCCTTTTCTA+GGG | + | chr7_3:43939516-43939535 | Msa1105460:five_prime_UTR | 45.0% |
| GAAAGAGGTAGAGAGAGAAG+GGG | - | chr7_3:43939574-43939593 | None:intergenic | 45.0% | |
| GAGAAAGAGGTAGAGAGAGA+AGG | - | chr7_3:43939576-43939595 | None:intergenic | 45.0% | |
| !! | GTTGATGGGAGTTTCAGGTT+TGG | - | chr7_3:43939635-43939654 | None:intergenic | 45.0% |
| GAGATCCGTATCACTACTCA+AGG | + | chr7_3:43939661-43939680 | Msa1105460:CDS | 45.0% | |
| ATTGACCTGAAGAAGCGAAG+TGG | - | chr7_3:43939713-43939732 | None:intergenic | 45.0% | |
| GAAACACTGACACAGATACC+AGG | - | chr7_3:43940234-43940253 | None:intergenic | 45.0% | |
| ! | GGTAAAAAGGTACAAGGGTG+TGG | - | chr7_3:43940843-43940862 | None:intergenic | 45.0% |
| CTACAACACAGAAGGAAAGG+AGG | - | chr7_3:43940864-43940883 | None:intergenic | 45.0% | |
| AACCGTTTGAACCGTGTGTA+AGG | - | chr7_3:43941193-43941212 | None:intergenic | 45.0% | |
| GATTCTGTCATCTGACGATG+AGG | + | chr7_3:43941306-43941325 | Msa1105460:intron | 45.0% | |
| TGCCATTGCAGAGATTCTGA+AGG | + | chr7_3:43942051-43942070 | Msa1105460:CDS | 45.0% | |
| ! | TGCAGTATCTTGGTGCAAAG+GGG | - | chr7_3:43942344-43942363 | None:intergenic | 45.0% |
| CTGAGCTGATTGCAGTATCT+TGG | - | chr7_3:43942354-43942373 | None:intergenic | 45.0% | |
| GGTACAAGACCCTCTTCAAT+GGG | - | chr7_3:43942400-43942419 | None:intergenic | 45.0% | |
| GTTATAACAGCTTCTTGGGG+AGG | + | chr7_3:43942654-43942673 | Msa1105460:intron | 45.0% | |
| TGCTGCTGATAATTGGAGTG+TGG | - | chr7_3:43942797-43942816 | None:intergenic | 45.0% | |
| CAGAGGTTGCTGCTGATAAT+TGG | - | chr7_3:43942804-43942823 | None:intergenic | 45.0% | |
| TAGAGGGAGAGGTAGGAATT+GGG | + | chr7_3:43942968-43942987 | Msa1105460:CDS | 45.0% | |
| GTGGTTATGGCTATCAAGGT+GGG | + | chr7_3:43942997-43943016 | Msa1105460:CDS | 45.0% | |
| TATGGCTATCAAGGTGGGTA+TGG | + | chr7_3:43943002-43943021 | Msa1105460:CDS | 45.0% | |
| GCTTGGTTCCTGACAGATAA+TGG | + | chr7_3:43943159-43943178 | Msa1105460:intron | 45.0% | |
| ! | TGGTTCCTGACAGATAATGG+TGG | + | chr7_3:43943162-43943181 | Msa1105460:intron | 45.0% |
| ! | GGTTCCTGACAGATAATGGT+GGG | + | chr7_3:43943163-43943182 | Msa1105460:intron | 45.0% |
| !!! | TTTTAAGGTGGTTACGGTGG+CGG | + | chr7_3:43943558-43943577 | Msa1105460:intron | 45.0% |
| ! | GGAGGTATGGGTTATGAAAG+AGG | + | chr7_3:43943888-43943907 | Msa1105460:CDS | 45.0% |
| ! | GTATGGGTTATGAAAGAGGC+AGG | + | chr7_3:43943892-43943911 | Msa1105460:CDS | 45.0% |
| ! | ATGGGTTATGAAAGAGGCAG+GGG | + | chr7_3:43943894-43943913 | Msa1105460:CDS | 45.0% |
| ACCTCTTTCTCTCTCTGCCA+TGG | + | chr7_3:43939585-43939604 | Msa1105460:exon | 50.0% | |
| TCCATGGCAGAGAGAGAAAG+AGG | - | chr7_3:43939589-43939608 | None:intergenic | 50.0% | |
| TTTCTCTCTCTGCCATGGAC+AGG | + | chr7_3:43939590-43939609 | Msa1105460:exon | 50.0% | |
| AACCTTCTGGTACCTGTCCA+TGG | - | chr7_3:43939605-43939624 | None:intergenic | 50.0% | |
| TGGCGCCTTGAGTAGTGATA+CGG | - | chr7_3:43939669-43939688 | None:intergenic | 50.0% | |
| TTACGCCACTTCGCTTCTTC+AGG | + | chr7_3:43939705-43939724 | Msa1105460:CDS | 50.0% | |
| TGTTGCATGCTCTGTAGCAC+CGG | + | chr7_3:43940112-43940131 | Msa1105460:intron | 50.0% | |
| ! | AGCACCGGAACTTCTGATGA+AGG | + | chr7_3:43940127-43940146 | Msa1105460:intron | 50.0% |
| CACGCCTTCATCAGAAGTTC+CGG | - | chr7_3:43940134-43940153 | None:intergenic | 50.0% | |
| CAACACTGACACGTCAACAC+AGG | - | chr7_3:43940207-43940226 | None:intergenic | 50.0% | |
| CGGTACAAGACCCTCTTCAA+TGG | - | chr7_3:43942401-43942420 | None:intergenic | 50.0% | |
| !! | GAATCCTGTGCTGGTTTCAG+AGG | - | chr7_3:43942821-43942840 | None:intergenic | 50.0% |
| TTTCTAGACTCGTATGGCCG+AGG | + | chr7_3:43942933-43942952 | Msa1105460:intron | 50.0% | |
| GTAGAGGGAGAGGTAGGAAT+TGG | + | chr7_3:43942967-43942986 | Msa1105460:CDS | 50.0% | |
| AGAGGGAGAGGTAGGAATTG+GGG | + | chr7_3:43942969-43942988 | Msa1105460:CDS | 50.0% | |
| GAGAGGTAGGAATTGGGGAA+GGG | + | chr7_3:43942974-43942993 | Msa1105460:CDS | 50.0% | |
| AGAGGTAGGAATTGGGGAAG+GGG | + | chr7_3:43942975-43942994 | Msa1105460:CDS | 50.0% | |
| AATTGGGGAAGGGGTGGTTA+TGG | + | chr7_3:43942984-43943003 | Msa1105460:CDS | 50.0% | |
| AGGGGTGGTTATGGCTATCA+AGG | + | chr7_3:43942993-43943012 | Msa1105460:CDS | 50.0% | |
| GGTGGTTATGGCTATCAAGG+TGG | + | chr7_3:43942996-43943015 | Msa1105460:CDS | 50.0% | |
| GGTGGATACGGCTATTACCA+AGG | + | chr7_3:43943035-43943054 | Msa1105460:CDS | 50.0% | |
| GGATACGGCTATTACCAAGG+TGG | + | chr7_3:43943038-43943057 | Msa1105460:CDS | 50.0% | |
| GGTATTCTAATCGTGGCCGA+GGG | + | chr7_3:43943184-43943203 | Msa1105460:CDS | 50.0% | |
| GTATTCTAATCGTGGCCGAG+GGG | + | chr7_3:43943185-43943204 | Msa1105460:CDS | 50.0% | |
| TATTCTAATCGTGGCCGAGG+GGG | + | chr7_3:43943186-43943205 | Msa1105460:CDS | 50.0% | |
| AGAGGTGGAGGTTATGAAGG+TGG | + | chr7_3:43943582-43943601 | Msa1105460:CDS | 50.0% | |
| GGAGGTTATGAAGGTGGTAG+AGG | + | chr7_3:43943588-43943607 | Msa1105460:CDS | 50.0% | |
| GGTTATGAAGGTGGTAGAGG+TGG | + | chr7_3:43943591-43943610 | Msa1105460:CDS | 50.0% | |
| TATGAAGGTGGTAGAGGTGG+AGG | + | chr7_3:43943594-43943613 | Msa1105460:CDS | 50.0% | |
| AGAGGTGGAGGTGGTTATGA+AGG | + | chr7_3:43943606-43943625 | Msa1105460:CDS | 50.0% | |
| TGGAGGTTATGAAGGTGGCA+GGG | + | chr7_3:43943659-43943678 | Msa1105460:CDS | 50.0% | |
| ! | AGAGGTGGTGGTTATGAAGG+AGG | + | chr7_3:43943771-43943790 | Msa1105460:CDS | 50.0% |
| AGAGGTGGAGGTTATGAAGG+AGG | + | chr7_3:43943582-43943601 | Msa1105460:CDS | 50.0% | |
| !! | GGTGGAGGAATGGGTTTTGT+AGG | + | chr7_3:43943822-43943841 | Msa1105460:CDS | 50.0% |
| !! | GGAGGAATGGGTTTTGTAGG+AGG | + | chr7_3:43943825-43943844 | Msa1105460:CDS | 50.0% |
| !! | ATGGGTTTTGTAGGAGGCAG+AGG | + | chr7_3:43943831-43943850 | Msa1105460:CDS | 50.0% |
| CATCCATTCTTCCCCTACCA+CGG | - | chr7_3:43943935-43943954 | None:intergenic | 50.0% | |
| TGGTAGAGGTGGAGAAAACC+AGG | + | chr7_3:43943962-43943981 | Msa1105460:CDS | 50.0% | |
| ACACCCATTGCTATCATGCC+TGG | - | chr7_3:43943983-43944002 | None:intergenic | 50.0% | |
| TGCCATGGACAGGTACCAGA+AGG | + | chr7_3:43939600-43939619 | Msa1105460:exon | 55.0% | |
| ACGTGTCAGTGTTGTGTGCC+TGG | + | chr7_3:43940213-43940232 | Msa1105460:intron | 55.0% | |
| TGTGTGGGAGCCCATTGAAG+AGG | + | chr7_3:43942387-43942406 | Msa1105460:CDS | 55.0% | |
| GTGTGGGAGCCCATTGAAGA+GGG | + | chr7_3:43942388-43942407 | Msa1105460:CDS | 55.0% | |
| !! | GCAACCTCTGAAACCAGCAC+AGG | + | chr7_3:43942814-43942833 | Msa1105460:CDS | 55.0% |
| GGAGAGGTAGGAATTGGGGA+AGG | + | chr7_3:43942973-43942992 | Msa1105460:CDS | 55.0% | |
| GGGTATTCTAATCGTGGCCG+AGG | + | chr7_3:43943183-43943202 | Msa1105460:CDS | 55.0% | |
| GGCAGAGGTGGAGGTTATGA+AGG | + | chr7_3:43943579-43943598 | Msa1105460:CDS | 55.0% | |
| GGTGGAGGTGGTTATGAAGG+TGG | + | chr7_3:43943609-43943628 | Msa1105460:CDS | 55.0% | |
| GGTGGTTATGAAGGTGGCAG+AGG | + | chr7_3:43943615-43943634 | Msa1105460:CDS | 55.0% | |
| GGTTATGAAGGTGGCAGAGG+TGG | + | chr7_3:43943618-43943637 | Msa1105460:CDS | 55.0% | |
| TATGAAGGTGGTCGTGGTGG+AGG | + | chr7_3:43943642-43943661 | Msa1105460:CDS | 55.0% | |
| ! | GGTCGTGGTGGAGGTTATGA+AGG | + | chr7_3:43943651-43943670 | Msa1105460:CDS | 55.0% |
| ! | CGTGGTGGAGGTTATGAAGG+TGG | + | chr7_3:43943654-43943673 | Msa1105460:CDS | 55.0% |
| GTGGAGGTTATGAAGGTGGC+AGG | + | chr7_3:43943658-43943677 | Msa1105460:CDS | 55.0% | |
| GGAGGTTATGAAGGTGGCAG+GGG | + | chr7_3:43943660-43943679 | Msa1105460:CDS | 55.0% | |
| GTTATGGAGGCAGAGGTGGA+GGG | + | chr7_3:43943688-43943707 | Msa1105460:CDS | 55.0% | |
| AGAGGTGGAGGATATGGAGG+AGG | + | chr7_3:43943747-43943766 | Msa1105460:CDS | 55.0% | |
| ! | GGCAGAGGTGGTGGTTATGA+AGG | + | chr7_3:43943768-43943787 | Msa1105460:CDS | 55.0% |
| GGTGGTTATGAAGGAGGCAG+AGG | + | chr7_3:43943777-43943796 | Msa1105460:CDS | 55.0% | |
| GGTTATGAAGGAGGCAGAGG+TGG | + | chr7_3:43943780-43943799 | Msa1105460:CDS | 55.0% | |
| TATGAAGGAGGCAGAGGTGG+AGG | + | chr7_3:43943783-43943802 | Msa1105460:CDS | 55.0% | |
| GGCAGAGGTGGAGGTTATGA+AGG | + | chr7_3:43943579-43943598 | Msa1105460:CDS | 55.0% | |
| GGAGGTTATGAAGGAGGCAG+AGG | + | chr7_3:43943801-43943820 | Msa1105460:CDS | 55.0% | |
| GGTTATGAAGGAGGCAGAGG+TGG | + | chr7_3:43943780-43943799 | Msa1105460:CDS | 55.0% | |
| TATGAAGGAGGCAGAGGTGG+AGG | + | chr7_3:43943783-43943802 | Msa1105460:CDS | 55.0% | |
| !! | GGTTTTGTAGGAGGCAGAGG+TGG | + | chr7_3:43943834-43943853 | Msa1105460:CDS | 55.0% |
| TTTGTAGGAGGCAGAGGTGG+AGG | + | chr7_3:43943837-43943856 | Msa1105460:CDS | 55.0% | |
| ! | GGAGGTGGTATGGGTTACGA+AGG | + | chr7_3:43943855-43943874 | Msa1105460:CDS | 55.0% |
| ! | GGTGGTATGGGTTACGAAGG+AGG | + | chr7_3:43943858-43943877 | Msa1105460:CDS | 55.0% |
| ! | ATGGGTTACGAAGGAGGCAG+AGG | + | chr7_3:43943864-43943883 | Msa1105460:CDS | 55.0% |
| GGTTATGAAAGAGGCAGGGG+AGG | + | chr7_3:43943897-43943916 | Msa1105460:CDS | 55.0% | |
| CGTGGTAGGGGAAGAATGGA+TGG | + | chr7_3:43943933-43943952 | Msa1105460:CDS | 55.0% | |
| AGGGGAAGAATGGATGGACG+TGG | + | chr7_3:43943939-43943958 | Msa1105460:CDS | 55.0% | |
| GGAAGAATGGATGGACGTGG+TGG | + | chr7_3:43943942-43943961 | Msa1105460:CDS | 55.0% | |
| ATGGATGGACGTGGTGGTAG+AGG | + | chr7_3:43943948-43943967 | Msa1105460:CDS | 55.0% | |
| CTCTACCTCGACCACGACCT+CGG | - | chr7_3:43942953-43942972 | None:intergenic | 60.0% | |
| GAGGTCGTGGTCGAGGTAGA+GGG | + | chr7_3:43942952-43942971 | Msa1105460:CDS | 60.0% | |
| GTCGAGGTAGAGGGAGAGGT+AGG | + | chr7_3:43942961-43942980 | Msa1105460:CDS | 60.0% | |
| GGTAGGAATTGGGGAAGGGG+TGG | + | chr7_3:43942978-43942997 | Msa1105460:CDS | 60.0% | |
| GAAGGTGGTAGAGGTGGAGG+TGG | + | chr7_3:43943597-43943616 | Msa1105460:CDS | 60.0% | |
| GGTGGCAGAGGTGGCTATGA+AGG | + | chr7_3:43943627-43943646 | Msa1105460:CDS | 60.0% | |
| GGCAGAGGTGGCTATGAAGG+TGG | + | chr7_3:43943630-43943649 | Msa1105460:CDS | 60.0% | |
| GGTGGCTATGAAGGTGGTCG+TGG | + | chr7_3:43943636-43943655 | Msa1105460:CDS | 60.0% | |
| GGCTATGAAGGTGGTCGTGG+TGG | + | chr7_3:43943639-43943658 | Msa1105460:CDS | 60.0% | |
| GGTTATGAAGGTGGCAGGGG+TGG | + | chr7_3:43943663-43943682 | Msa1105460:CDS | 60.0% | |
| TATGAAGGTGGCAGGGGTGG+AGG | + | chr7_3:43943666-43943685 | Msa1105460:CDS | 60.0% | |
| GGTGGAGGTTATGGAGGCAG+AGG | + | chr7_3:43943681-43943700 | Msa1105460:CDS | 60.0% | |
| GGAGGTTATGGAGGCAGAGG+TGG | + | chr7_3:43943684-43943703 | Msa1105460:CDS | 60.0% | |
| GGTTATGGAGGCAGAGGTGG+AGG | + | chr7_3:43943687-43943706 | Msa1105460:CDS | 60.0% | |
| ! | AGAGGTGGAGGGTACGAAGG+AGG | + | chr7_3:43943699-43943718 | Msa1105460:CDS | 60.0% |
| TACGAAGGAGGCAGAGGTGG+AGG | + | chr7_3:43943711-43943730 | Msa1105460:CDS | 60.0% | |
| ACGAAGGAGGCAGAGGTGGA+GGG | + | chr7_3:43943712-43943731 | Msa1105460:CDS | 60.0% | |
| ! | AGAGGTGGAGGGTATGGTGG+AGG | + | chr7_3:43943723-43943742 | Msa1105460:CDS | 60.0% |
| ! | TATGGTGGAGGCAGAGGTGG+AGG | + | chr7_3:43943735-43943754 | Msa1105460:CDS | 60.0% |
| GGAGGCAGAGGTGGAGGATA+TGG | + | chr7_3:43943741-43943760 | Msa1105460:CDS | 60.0% | |
| GGCAGAGGTGGAGGATATGG+AGG | + | chr7_3:43943744-43943763 | Msa1105460:CDS | 60.0% | |
| GGAGGATATGGAGGAGGCAG+AGG | + | chr7_3:43943753-43943772 | Msa1105460:CDS | 60.0% | |
| GGATATGGAGGAGGCAGAGG+TGG | + | chr7_3:43943756-43943775 | Msa1105460:CDS | 60.0% | |
| TATGGAGGAGGCAGAGGTGG+TGG | + | chr7_3:43943759-43943778 | Msa1105460:CDS | 60.0% | |
| AGGAGGCAGAGGTGGAGGAA+TGG | + | chr7_3:43943812-43943831 | Msa1105460:CDS | 60.0% | |
| GGAGGCAGAGGTGGAGGAAT+GGG | + | chr7_3:43943813-43943832 | Msa1105460:CDS | 60.0% | |
| AGGCAGAGGTGGAGGTGGTA+TGG | + | chr7_3:43943845-43943864 | Msa1105460:CDS | 60.0% | |
| GGCAGAGGTGGAGGTGGTAT+GGG | + | chr7_3:43943846-43943865 | Msa1105460:CDS | 60.0% | |
| GGTTACGAAGGAGGCAGAGG+TGG | + | chr7_3:43943867-43943886 | Msa1105460:CDS | 60.0% | |
| TACGAAGGAGGCAGAGGTGG+AGG | + | chr7_3:43943711-43943730 | Msa1105460:CDS | 60.0% | |
| AGGAGGCAGAGGTGGAGGTA+TGG | + | chr7_3:43943875-43943894 | Msa1105460:CDS | 60.0% | |
| ! | GGAGGCAGAGGTGGAGGTAT+GGG | + | chr7_3:43943876-43943895 | Msa1105460:CDS | 60.0% |
| ATGAAAGAGGCAGGGGAGGC+AGG | + | chr7_3:43943901-43943920 | Msa1105460:CDS | 60.0% | |
| TGAAAGAGGCAGGGGAGGCA+GGG | + | chr7_3:43943902-43943921 | Msa1105460:CDS | 60.0% | |
| CAGGGGATATGGCCGTGGTA+GGG | + | chr7_3:43943920-43943939 | Msa1105460:CDS | 60.0% | |
| AGGGGATATGGCCGTGGTAG+GGG | + | chr7_3:43943921-43943940 | Msa1105460:CDS | 60.0% | |
| TGGCCGTGGTAGGGGAAGAA+TGG | + | chr7_3:43943929-43943948 | Msa1105460:CDS | 60.0% | |
| GATGGACGTGGTGGTAGAGG+TGG | + | chr7_3:43943951-43943970 | Msa1105460:CDS | 60.0% | |
| GACTCGTATGGCCGAGGTCG+TGG | + | chr7_3:43942939-43942958 | Msa1105460:intron | 65.0% | |
| TATGGCCGAGGTCGTGGTCG+AGG | + | chr7_3:43942945-43942964 | Msa1105460:CDS | 65.0% | |
| CGAGGTCGTGGTCGAGGTAG+AGG | + | chr7_3:43942951-43942970 | Msa1105460:CDS | 65.0% | |
| CGTGGTCGAGGTAGAGGGAG+AGG | + | chr7_3:43942957-43942976 | Msa1105460:CDS | 65.0% | |
| TCTAATCGTGGCCGAGGGGG+AGG | + | chr7_3:43943189-43943208 | Msa1105460:CDS | 65.0% | |
| GGGAGGTCGAGGCAGAGGTT+GGG | + | chr7_3:43943206-43943225 | Msa1105460:CDS | 65.0% | |
| GGAGGTCGAGGCAGAGGTTG+GGG | + | chr7_3:43943207-43943226 | Msa1105460:CDS | 65.0% | |
| GAGGTCGAGGCAGAGGTTGG+GGG | + | chr7_3:43943208-43943227 | Msa1105460:CDS | 65.0% | |
| !! | GGCAGAGGTTGGGGGTATCG+TGG | + | chr7_3:43943216-43943235 | Msa1105460:CDS | 65.0% |
| GGTGGCAGGGGTGGAGGTTA+TGG | + | chr7_3:43943672-43943691 | Msa1105460:CDS | 65.0% | |
| GGCAGGGGTGGAGGTTATGG+AGG | + | chr7_3:43943675-43943694 | Msa1105460:CDS | 65.0% | |
| ! | GGCAGAGGTGGAGGGTACGA+AGG | + | chr7_3:43943696-43943715 | Msa1105460:CDS | 65.0% |
| ! | GGAGGGTACGAAGGAGGCAG+AGG | + | chr7_3:43943705-43943724 | Msa1105460:CDS | 65.0% |
| GGGTACGAAGGAGGCAGAGG+TGG | + | chr7_3:43943708-43943727 | Msa1105460:CDS | 65.0% | |
| GGAGGCAGAGGTGGAGGGTA+TGG | + | chr7_3:43943693-43943712 | Msa1105460:CDS | 65.0% | |
| ! | GGCAGAGGTGGAGGGTATGG+TGG | + | chr7_3:43943720-43943739 | Msa1105460:CDS | 65.0% |
| ! | GGAGGGTATGGTGGAGGCAG+AGG | + | chr7_3:43943729-43943748 | Msa1105460:CDS | 65.0% |
| ! | GGGTATGGTGGAGGCAGAGG+TGG | + | chr7_3:43943732-43943751 | Msa1105460:CDS | 65.0% |
| GTAGGAGGCAGAGGTGGAGG+TGG | + | chr7_3:43943840-43943859 | Msa1105460:CDS | 65.0% | |
| GAAAGAGGCAGGGGAGGCAG+GGG | + | chr7_3:43943903-43943922 | Msa1105460:CDS | 65.0% | |
| GCAGGGGATATGGCCGTGGT+AGG | + | chr7_3:43943919-43943938 | Msa1105460:CDS | 65.0% | |
| CTCTGCCTCGACCTCCCCCT+CGG | - | chr7_3:43943203-43943222 | None:intergenic | 70.0% | |
| GGGGAGGTCGAGGCAGAGGT+TGG | + | chr7_3:43943205-43943224 | Msa1105460:CDS | 70.0% | |
| ! | GGTGGTTACGGTGGCGGCAG+AGG | + | chr7_3:43943564-43943583 | Msa1105460:intron | 70.0% |
| ! | GGTTACGGTGGCGGCAGAGG+TGG | + | chr7_3:43943567-43943586 | Msa1105460:CDS | 70.0% |
| ! | TACGGTGGCGGCAGAGGTGG+AGG | + | chr7_3:43943570-43943589 | Msa1105460:CDS | 70.0% |
| GGCAGGGGAGGCAGGGGATA+TGG | + | chr7_3:43943909-43943928 | Msa1105460:CDS | 70.0% | |
| GGAGGCAGGGGATATGGCCG+TGG | + | chr7_3:43943915-43943934 | Msa1105460:CDS | 70.0% | |
| CGAGGGGGAGGTCGAGGCAG+AGG | + | chr7_3:43943201-43943220 | Msa1105460:CDS | 75.0% | |
| ! | CGTGGCCGAGGGGGAGGTCG+AGG | + | chr7_3:43943195-43943214 | Msa1105460:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 43939439 | 43944369 | 43939439 | ID=Msa1105460;Name=Msa1105460 |
| chr7_3 | mRNA | 43939439 | 43944369 | 43939439 | ID=Msa1105460-mRNA-1;Parent=Msa1105460;Name=Msa1105460-mRNA-1;_AED=0.03;_eAED=0.03;_QI=165|1|1|1|1|1|8|380|364 |
| chr7_3 | exon | 43939439 | 43939726 | 43939439 | ID=Msa1105460-mRNA-1:exon:9049;Parent=Msa1105460-mRNA-1 |
| chr7_3 | exon | 43941992 | 43942072 | 43941992 | ID=Msa1105460-mRNA-1:exon:9050;Parent=Msa1105460-mRNA-1 |
| chr7_3 | exon | 43942331 | 43942419 | 43942331 | ID=Msa1105460-mRNA-1:exon:9051;Parent=Msa1105460-mRNA-1 |
| chr7_3 | exon | 43942515 | 43942589 | 43942515 | ID=Msa1105460-mRNA-1:exon:9052;Parent=Msa1105460-mRNA-1 |
| chr7_3 | exon | 43942760 | 43942860 | 43942760 | ID=Msa1105460-mRNA-1:exon:9053;Parent=Msa1105460-mRNA-1 |
| chr7_3 | exon | 43942940 | 43943077 | 43942940 | ID=Msa1105460-mRNA-1:exon:9054;Parent=Msa1105460-mRNA-1 |
| chr7_3 | exon | 43943175 | 43943237 | 43943175 | ID=Msa1105460-mRNA-1:exon:9055;Parent=Msa1105460-mRNA-1 |
| chr7_3 | exon | 43943565 | 43944369 | 43943565 | ID=Msa1105460-mRNA-1:exon:9056;Parent=Msa1105460-mRNA-1 |
| chr7_3 | five_prime_UTR | 43939439 | 43939603 | 43939439 | ID=Msa1105460-mRNA-1:five_prime_utr;Parent=Msa1105460-mRNA-1 |
| chr7_3 | CDS | 43939604 | 43939726 | 43939604 | ID=Msa1105460-mRNA-1:cds;Parent=Msa1105460-mRNA-1 |
| chr7_3 | CDS | 43941992 | 43942072 | 43941992 | ID=Msa1105460-mRNA-1:cds;Parent=Msa1105460-mRNA-1 |
| chr7_3 | CDS | 43942331 | 43942419 | 43942331 | ID=Msa1105460-mRNA-1:cds;Parent=Msa1105460-mRNA-1 |
| chr7_3 | CDS | 43942515 | 43942589 | 43942515 | ID=Msa1105460-mRNA-1:cds;Parent=Msa1105460-mRNA-1 |
| chr7_3 | CDS | 43942760 | 43942860 | 43942760 | ID=Msa1105460-mRNA-1:cds;Parent=Msa1105460-mRNA-1 |
| chr7_3 | CDS | 43942940 | 43943077 | 43942940 | ID=Msa1105460-mRNA-1:cds;Parent=Msa1105460-mRNA-1 |
| chr7_3 | CDS | 43943175 | 43943237 | 43943175 | ID=Msa1105460-mRNA-1:cds;Parent=Msa1105460-mRNA-1 |
| chr7_3 | CDS | 43943565 | 43943989 | 43943565 | ID=Msa1105460-mRNA-1:cds;Parent=Msa1105460-mRNA-1 |
| chr7_3 | three_prime_UTR | 43943990 | 43944369 | 43943990 | ID=Msa1105460-mRNA-1:three_prime_utr;Parent=Msa1105460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
