Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573260 | XP_003630608.2 | 97.619 | 546 | 7 | 3 | 1 | 544 | 1 | 542 | 0.0 | 1092 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573260 | sp|B9HBA8|ACCC1_POPTR | 86.148 | 527 | 61 | 4 | 1 | 526 | 1 | 516 | 0.0 | 927 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573260 | G7LIV6 | 97.619 | 546 | 7 | 3 | 1 | 544 | 1 | 542 | 0.0 | 1092 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0374240 | Msa0573260 | 0.857788 | 1.285223e-62 | -8.615850e-47 |
| Msa0469800 | Msa0573260 | 0.881620 | 2.063351e-70 | -8.615850e-47 |
| Msa0469810 | Msa0573260 | 0.844614 | 6.776839e-59 | -8.615850e-47 |
| Msa0515360 | Msa0573260 | 0.843091 | 1.734459e-58 | -8.615850e-47 |
| Msa0518590 | Msa0573260 | 0.802281 | 6.043708e-49 | -8.615850e-47 |
| Msa0573260 | Msa0615640 | 0.815443 | 9.221100e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573260 | MtrunA17_Chr8g0389041 | 97.619 | 546 | 7 | 3 | 1 | 544 | 1 | 542 | 0.0 | 1092 |
| Msa0573260 | MtrunA17_Chr1g0185251 | 47.228 | 451 | 237 | 1 | 74 | 523 | 44 | 494 | 1.07e-136 | 414 |
| Msa0573260 | MtrunA17_Chr3g0115531 | 29.457 | 516 | 294 | 8 | 65 | 514 | 29 | 540 | 2.71e-63 | 225 |
| Msa0573260 | MtrunA17_Chr3g0115521 | 32.047 | 337 | 192 | 5 | 65 | 368 | 7 | 339 | 3.55e-50 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573260 | AT5G35360.1 | 82.593 | 540 | 81 | 5 | 1 | 535 | 1 | 532 | 0.0 | 889 |
| Msa0573260 | AT5G35360.3 | 81.952 | 543 | 87 | 4 | 1 | 538 | 1 | 537 | 0.0 | 888 |
| Msa0573260 | AT5G35360.2 | 82.400 | 500 | 76 | 5 | 1 | 495 | 1 | 493 | 0.0 | 820 |
| Msa0573260 | AT1G03090.2 | 47.661 | 449 | 233 | 2 | 75 | 521 | 38 | 486 | 2.30e-142 | 428 |
| Msa0573260 | AT1G03090.1 | 46.102 | 449 | 220 | 3 | 75 | 521 | 38 | 466 | 1.05e-132 | 403 |
| Msa0573260 | AT1G36160.2 | 29.903 | 515 | 291 | 8 | 66 | 514 | 28 | 538 | 1.29e-64 | 229 |
| Msa0573260 | AT1G36160.1 | 29.903 | 515 | 291 | 8 | 66 | 514 | 28 | 538 | 1.29e-64 | 229 |
| Msa0573260 | AT1G36180.1 | 29.515 | 515 | 293 | 8 | 66 | 514 | 130 | 640 | 3.60e-63 | 225 |
| Msa0573260 | AT1G36180.3 | 30.375 | 293 | 162 | 5 | 66 | 326 | 130 | 412 | 2.87e-34 | 135 |
| Msa0573260 | AT1G36180.2 | 30.576 | 278 | 157 | 4 | 66 | 311 | 130 | 403 | 3.40e-34 | 134 |
Find 177 sgRNAs with CRISPR-Local
Find 564 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCTAGCAAGTTGAATTTA+AGG | 0.144812 | 4_1:-76359151 | Msa0573260:three_prime_UTR |
| CATAACCTAGCACTAATATT+TGG | 0.154746 | 4_1:+76359271 | None:intergenic |
| AATTATTGAACGGATAATTA+TGG | 0.177969 | 4_1:+76359337 | None:intergenic |
| TGGAAATGATGGGGTTTATT+TGG | 0.183921 | 4_1:-76364505 | Msa0573260:CDS |
| AGATGCTCTTCATGTTAAAT+TGG | 0.211657 | 4_1:-76366843 | Msa0573260:CDS |
| CCTTTCAGCCTGACAGTATT+CGG | 0.227213 | 4_1:-76365957 | Msa0573260:intron |
| CCTCGGAAACTTCACCTTAT+TGG | 0.229123 | 4_1:+76367039 | None:intergenic |
| CAACAGTGCAAATTCTTTAT+AGG | 0.233150 | 4_1:+76359422 | None:intergenic |
| AATAATTTCACAAACTCTTT+AGG | 0.243552 | 4_1:+76365034 | None:intergenic |
| AATAAACGGCTGAGATTAAA+AGG | 0.256829 | 4_1:-76367651 | Msa0573260:five_prime_UTR |
| TTAAATTACAGAAACAATTA+TGG | 0.271829 | 4_1:-76367301 | Msa0573260:exon |
| CCAAGCTATGACTCTCTTCT+TGG | 0.274076 | 4_1:-76361721 | Msa0573260:CDS |
| TTGTCGTCTTGACAAGATTT+TGG | 0.277187 | 4_1:-76366957 | Msa0573260:CDS |
| GCCTGACAGTATTCGGGTTA+TGG | 0.282616 | 4_1:-76365950 | Msa0573260:CDS |
| AGAGTTTGTGAAATTATTAC+AGG | 0.287061 | 4_1:-76365029 | Msa0573260:intron |
| ATAACCTAGCACTAATATTT+GGG | 0.291185 | 4_1:+76359272 | None:intergenic |
| CAAATATTAGTGCTAGGTTA+TGG | 0.298100 | 4_1:-76359270 | Msa0573260:three_prime_UTR |
| TTTAGTGATTCCAAATGTTC+TGG | 0.308665 | 4_1:-76366589 | Msa0573260:CDS |
| TGCAAAAGCCCCTCACTTCC+TGG | 0.315102 | 4_1:+76365874 | None:intergenic |
| GCTGAGATTAAAAGGAAATA+AGG | 0.320744 | 4_1:-76367643 | Msa0573260:five_prime_UTR |
| CAACATAATCGGGATAAATA+TGG | 0.320897 | 4_1:+76361749 | None:intergenic |
| ATTCGTACTGCTCATGAATT+GGG | 0.322990 | 4_1:-76366902 | Msa0573260:CDS |
| CCCATTGCCTTCCGTAACTC+TGG | 0.330454 | 4_1:+76363086 | None:intergenic |
| TATTTGTTGTGCTGTAATAA+TGG | 0.330892 | 4_1:+76367586 | None:intergenic |
| TATTCGTACTGCTCATGAAT+TGG | 0.336316 | 4_1:-76366903 | Msa0573260:CDS |
| CAGGTTCTTGCAGATAAATA+TGG | 0.341311 | 4_1:-76363753 | Msa0573260:CDS |
| ATTATTGAACGGATAATTAT+GGG | 0.345279 | 4_1:+76359338 | None:intergenic |
| GCAAATGTTCCTACTGTTCC+AGG | 0.347800 | 4_1:-76365892 | Msa0573260:CDS |
| CCCAAGGCACATTGAATTCC+AGG | 0.349569 | 4_1:-76364466 | Msa0573260:intron |
| ATTGTTGTTAGATTTAGATT+TGG | 0.353083 | 4_1:-76367564 | Msa0573260:five_prime_UTR |
| ACAATGTTGCATCCTGGATA+TGG | 0.358968 | 4_1:-76366543 | Msa0573260:CDS |
| AGTGAGGCAGCTGCTGCATT+TGG | 0.364842 | 4_1:-76364525 | Msa0573260:CDS |
| AAATATTAGTGCTAGGTTAT+GGG | 0.365082 | 4_1:-76359269 | Msa0573260:three_prime_UTR |
| AAACTTCACCTTATTGGTTC+CGG | 0.366780 | 4_1:+76367045 | None:intergenic |
| TTTCTTGACCGGAACCAATA+AGG | 0.368131 | 4_1:-76367053 | Msa0573260:intron |
| GCCAACTCCTCCTCGTGCTT+TGG | 0.372785 | 4_1:+76359952 | None:intergenic |
| TAGTAATACTAGTAGTATAT+TGG | 0.373677 | 4_1:+76367484 | None:intergenic |
| CCTGACAGTATTCGGGTTAT+GGG | 0.377073 | 4_1:-76365949 | Msa0573260:CDS |
| CGCGCTTGGCGTTGTTTACA+AGG | 0.383813 | 4_1:+76367004 | None:intergenic |
| CTTTCAGCCTGACAGTATTC+GGG | 0.385264 | 4_1:-76365956 | Msa0573260:intron |
| GTAGCAGCAGCCAGAACATT+TGG | 0.387270 | 4_1:+76366579 | None:intergenic |
| CCTGGAATTCAATGTGCCTT+GGG | 0.390988 | 4_1:+76364466 | None:intergenic |
| TAATGGACCTTGCCTCTTGT+TGG | 0.398639 | 4_1:+76367603 | None:intergenic |
| TTATGATAATCAATTGTTGT+AGG | 0.405072 | 4_1:+76360143 | None:intergenic |
| TATGGTAATGTTGTTCACTT+TGG | 0.406381 | 4_1:-76363735 | Msa0573260:CDS |
| TGCATTGATACGGCATTCAA+TGG | 0.407657 | 4_1:+76362160 | None:intergenic |
| GCTTGGAGGAACAACATAAT+CGG | 0.421150 | 4_1:+76361738 | None:intergenic |
| ACCTGGAATTCAATGTGCCT+TGG | 0.421295 | 4_1:+76364465 | None:intergenic |
| CTAATACCATCTTCTGTTGT+GGG | 0.421823 | 4_1:+76359514 | None:intergenic |
| GCGGCGAGAGGAGGAGGAGG+AGG | 0.426205 | 4_1:-76367109 | Msa0573260:CDS |
| TGGAACGGTTGAGTTCCTTT+TGG | 0.434021 | 4_1:-76363018 | Msa0573260:CDS |
| TAGTACGTACGATTGGCTAC+TGG | 0.437946 | 4_1:+76366790 | None:intergenic |
| AATGGGAGATGCAGCAGTTC+AGG | 0.442712 | 4_1:-76363069 | Msa0573260:CDS |
| ATCAGACTGGCACACGAGAT+TGG | 0.444872 | 4_1:-76365722 | Msa0573260:CDS |
| CCATTGCCTTCCGTAACTCT+GGG | 0.448306 | 4_1:+76363087 | None:intergenic |
| AAGCAATTGAACGCATGAAA+AGG | 0.450014 | 4_1:-76360580 | Msa0573260:CDS |
| GCTGATGAATCTGTTTGTAT+TGG | 0.453546 | 4_1:-76366821 | Msa0573260:CDS |
| TTATTTGCGGCGAGAGGAGG+AGG | 0.455580 | 4_1:-76367115 | Msa0573260:CDS |
| GCTGCTGCATTTGGAAATGA+TGG | 0.461431 | 4_1:-76364516 | Msa0573260:CDS |
| TCTCAGGCAACCGCAGGTGG+TGG | 0.464445 | 4_1:-76365085 | Msa0573260:intron |
| AAAATGTGTTGGAATGGAAT+GGG | 0.469123 | 4_1:+76367436 | None:intergenic |
| CGTCTGGTGGTCCATTTGTC+AGG | 0.469633 | 4_1:-76361780 | Msa0573260:CDS |
| GTTGAAATGTGTAGAGATCA+TGG | 0.470064 | 4_1:-76366495 | Msa0573260:CDS |
| ACCGCAGGTGGTGGAGGACG+TGG | 0.475210 | 4_1:-76365076 | Msa0573260:CDS |
| CAGGCAACCGCAGGTGGTGG+AGG | 0.475314 | 4_1:-76365082 | Msa0573260:CDS |
| TTTCACTGCACTTTCTTGAC+CGG | 0.475964 | 4_1:-76367064 | Msa0573260:CDS |
| TGGCTATCCATCCTGACAAA+TGG | 0.476844 | 4_1:+76361769 | None:intergenic |
| AGAGCAAATTCGTGTAGCTA+TGG | 0.477901 | 4_1:-76362297 | Msa0573260:CDS |
| CCAAGAAGAGAGTCATAGCT+TGG | 0.478585 | 4_1:+76361721 | None:intergenic |
| CTGAGATTAAAAGGAAATAA+GGG | 0.479379 | 4_1:-76367642 | Msa0573260:five_prime_UTR |
| CAATCTACCTTGATCATCAC+AGG | 0.481934 | 4_1:+76365695 | None:intergenic |
| TTGATCCAAGGGTTTATTTG+CGG | 0.485761 | 4_1:-76367128 | Msa0573260:intron |
| CGTAACTCTGGGGTCAATGC+AGG | 0.488566 | 4_1:+76363098 | None:intergenic |
| TCCAAAGCACGAGGAGGAGT+TGG | 0.489276 | 4_1:-76359953 | Msa0573260:CDS |
| ACTAATACCATCTTCTGTTG+TGG | 0.490006 | 4_1:+76359513 | None:intergenic |
| CTGCATTGACCCCAGAGTTA+CGG | 0.493052 | 4_1:-76363097 | Msa0573260:CDS |
| AGAAAAGCTTCGATACAAAC+AGG | 0.494948 | 4_1:-76362273 | Msa0573260:intron |
| AACAGCAATCTCGCCTCGAT+TGG | 0.496053 | 4_1:+76366931 | None:intergenic |
| CTTGGAGGAACAACATAATC+GGG | 0.496995 | 4_1:+76361739 | None:intergenic |
| AAGAACCCCTTTCATCCAAA+AGG | 0.501303 | 4_1:+76363003 | None:intergenic |
| GAAAATGTGTTGGAATGGAA+TGG | 0.509677 | 4_1:+76367435 | None:intergenic |
| GAGCACCGCAATGACGCGCT+TGG | 0.511028 | 4_1:+76366990 | None:intergenic |
| TTTGCGGCGAGAGGAGGAGG+AGG | 0.511188 | 4_1:-76367112 | Msa0573260:CDS |
| ACAACAATCATCTAAAATCA+TGG | 0.511503 | 4_1:+76359240 | None:intergenic |
| AGCAATTGAACGCATGAAAA+GGG | 0.514464 | 4_1:-76360579 | Msa0573260:CDS |
| AGTACGTACGATTGGCTACT+GGG | 0.516459 | 4_1:+76366791 | None:intergenic |
| TGGTTTCCCTGTGATGATCA+AGG | 0.520165 | 4_1:-76365702 | Msa0573260:intron |
| ATGAAGAGCATCTTTATCAA+TGG | 0.520742 | 4_1:+76366853 | None:intergenic |
| TAGTAGTATATTGGTGTCGA+TGG | 0.521704 | 4_1:+76367493 | None:intergenic |
| GGAGATGAACACTCGTATCC+AGG | 0.523521 | 4_1:-76362970 | Msa0573260:intron |
| TCACCCCAAATATTAGTGCT+AGG | 0.523919 | 4_1:-76359276 | Msa0573260:three_prime_UTR |
| AAGCATCTTCTGCATTGATA+CGG | 0.524332 | 4_1:+76362150 | None:intergenic |
| CCCAGAGTTACGGAAGGCAA+TGG | 0.524639 | 4_1:-76363087 | Msa0573260:CDS |
| AGATAGTCATAATATCCATC+AGG | 0.528142 | 4_1:+76359455 | None:intergenic |
| CCTACTGTTCCAGGAAGTGA+GGG | 0.528598 | 4_1:-76365883 | Msa0573260:CDS |
| TAAACTTATCCTTGACATAG+AGG | 0.530123 | 4_1:-76360123 | Msa0573260:intron |
| CCAGAGTTACGGAAGGCAAT+GGG | 0.540160 | 4_1:-76363086 | Msa0573260:CDS |
| AGAACGTGATTGCAGTATCC+AGG | 0.541683 | 4_1:-76363712 | Msa0573260:intron |
| TCAGCAAGAAAACCATATCC+AGG | 0.543893 | 4_1:+76366531 | None:intergenic |
| GTTCAGGCTGCCGCATCTAT+CGG | 0.544965 | 4_1:-76363053 | Msa0573260:CDS |
| ATAGGAAAATGAAAATGTGT+TGG | 0.545587 | 4_1:+76367425 | None:intergenic |
| AAAATGAAAATGTGTTGGAA+TGG | 0.545674 | 4_1:+76367430 | None:intergenic |
| CCCATAACCCGAATACTGTC+AGG | 0.546169 | 4_1:+76365949 | None:intergenic |
| TTTACAAAATAATTATTGAA+CGG | 0.547908 | 4_1:+76359327 | None:intergenic |
| CATCAGGCAGTCGAGCCAGC+TGG | 0.552188 | 4_1:+76359471 | None:intergenic |
| CAACATTGTACATTGGCGGC+TGG | 0.554436 | 4_1:+76366557 | None:intergenic |
| ATTACAGCATACTTGCCGTC+TGG | 0.554457 | 4_1:-76361796 | Msa0573260:CDS |
| CAGCTGGCTCGACTGCCTGA+TGG | 0.557837 | 4_1:-76359470 | Msa0573260:exon |
| CTCGATGACACTATTATCAC+AGG | 0.559575 | 4_1:-76360554 | Msa0573260:intron |
| AAGAGCATCTTTATCAATGG+TGG | 0.559896 | 4_1:+76366856 | None:intergenic |
| TTGTTAGATTTAGATTTGGA+CGG | 0.560273 | 4_1:-76367560 | Msa0573260:five_prime_UTR |
| TGGTGGTCCATTTGTCAGGA+TGG | 0.560888 | 4_1:-76361776 | Msa0573260:CDS |
| GGTTTATTTGCGGCGAGAGG+AGG | 0.562352 | 4_1:-76367118 | Msa0573260:CDS |
| CTGCTGCATTTGGAAATGAT+GGG | 0.562803 | 4_1:-76364515 | Msa0573260:CDS |
| CAGTGCAAATTCTTTATAGG+AGG | 0.563484 | 4_1:+76359425 | None:intergenic |
| CTATGACTCTCTTCTTGGAA+AGG | 0.563838 | 4_1:-76361716 | Msa0573260:intron |
| CAAGGTTGAGTAGTTTGCCT+CGG | 0.565038 | 4_1:+76367022 | None:intergenic |
| CAACGCCAAGCGCGTCATTG+CGG | 0.565275 | 4_1:-76366995 | Msa0573260:CDS |
| AAGGGATTTAGACCAGGGCC+AGG | 0.565890 | 4_1:-76362125 | Msa0573260:intron |
| TTGATGATAGGATCGAAAGA+AGG | 0.570282 | 4_1:-76367689 | None:intergenic |
| TACATCAAGATACCTGGCCC+TGG | 0.571298 | 4_1:+76362113 | None:intergenic |
| TGAGGAAATCATTTCTGTCA+CGG | 0.571947 | 4_1:+76362334 | None:intergenic |
| GATGCAACATTGTACATTGG+CGG | 0.576406 | 4_1:+76366553 | None:intergenic |
| GAGCAAATTCGTGTAGCTAT+GGG | 0.578066 | 4_1:-76362296 | Msa0573260:CDS |
| GCCACGTCCTCCACCACCTG+CGG | 0.582518 | 4_1:+76365075 | None:intergenic |
| GAGGAAATCATTTCTGTCAC+GGG | 0.583791 | 4_1:+76362335 | None:intergenic |
| CAATGTACAATGTTGCATCC+TGG | 0.587383 | 4_1:-76366549 | Msa0573260:CDS |
| TCCTACTGTTCCAGGAAGTG+AGG | 0.587626 | 4_1:-76365884 | Msa0573260:CDS |
| TCTATCGGTTACATAGGTGT+TGG | 0.588939 | 4_1:-76363038 | Msa0573260:CDS |
| GGTGTTTCTCAGGCAACCGC+AGG | 0.590976 | 4_1:-76365091 | Msa0573260:intron |
| GTTTCTCAGGCAACCGCAGG+TGG | 0.592729 | 4_1:-76365088 | Msa0573260:intron |
| GCACGAGGAGGAGTTGGCTG+TGG | 0.593342 | 4_1:-76359947 | Msa0573260:intron |
| CCCTCACTTCCTGGAACAGT+AGG | 0.596080 | 4_1:+76365883 | None:intergenic |
| CGGTTACATAGGTGTTGGAA+CGG | 0.600084 | 4_1:-76363033 | Msa0573260:CDS |
| AAGGGTTTATTTGCGGCGAG+AGG | 0.602268 | 4_1:-76367121 | Msa0573260:CDS |
| TCTGGGGTCAATGCAGGAGA+CGG | 0.603122 | 4_1:+76363104 | None:intergenic |
| AATGTGTTGGAATGGAATGG+GGG | 0.604075 | 4_1:+76367438 | None:intergenic |
| TGCTGCATTTGGAAATGATG+GGG | 0.605718 | 4_1:-76364514 | Msa0573260:CDS |
| AAATGTGTTGGAATGGAATG+GGG | 0.607231 | 4_1:+76367437 | None:intergenic |
| TAATACCATCTTCTGTTGTG+GGG | 0.607382 | 4_1:+76359515 | None:intergenic |
| CTCTTCTATCAAATCAACTG+AGG | 0.608733 | 4_1:+76362316 | None:intergenic |
| ACAGCATACTTGCCGTCTGG+TGG | 0.610187 | 4_1:-76361793 | Msa0573260:CDS |
| CACTGAAGAAGCTATCAGAC+TGG | 0.611224 | 4_1:-76365735 | Msa0573260:CDS |
| TTCGTACTGCTCATGAATTG+GGG | 0.614649 | 4_1:-76366901 | Msa0573260:CDS |
| CTACTGTTCCAGGAAGTGAG+GGG | 0.616506 | 4_1:-76365882 | Msa0573260:CDS |
| AATTACAGAAACAATTATGG+AGG | 0.622062 | 4_1:-76367298 | Msa0573260:exon |
| GTTGCTGAGGTTCCAACAAG+AGG | 0.623294 | 4_1:-76367615 | Msa0573260:five_prime_UTR |
| GAAGATGGTATTAGTTAACA+AGG | 0.625049 | 4_1:-76359505 | Msa0573260:CDS |
| TATTGGTGTCGATGGAAACG+AGG | 0.627719 | 4_1:+76367501 | None:intergenic |
| AATACCATCTTCTGTTGTGG+GGG | 0.628217 | 4_1:+76359516 | None:intergenic |
| CCAATAAGGTGAAGTTTCCG+AGG | 0.628461 | 4_1:-76367039 | Msa0573260:intron |
| CAGGATGCAACATTGTACAT+TGG | 0.629506 | 4_1:+76366550 | None:intergenic |
| AGAACTTTCTCAAGCACACG+CGG | 0.633192 | 4_1:+76359384 | None:intergenic |
| TTTACAGCAAGCTAAGAGTG+AGG | 0.634435 | 4_1:-76364541 | Msa0573260:intron |
| AAATAAGGGCTAAGTTGCTG+AGG | 0.635491 | 4_1:-76367628 | Msa0573260:five_prime_UTR |
| CAGTCTGATAGCTTCTTCAG+TGG | 0.642003 | 4_1:+76365736 | None:intergenic |
| ATGCACCTACCTCTATGTCA+AGG | 0.645661 | 4_1:+76360114 | None:intergenic |
| TGAGGTTCCAACAAGAGGCA+AGG | 0.646365 | 4_1:-76367610 | Msa0573260:five_prime_UTR |
| AGAAGTACATTCAAAACCCA+AGG | 0.649047 | 4_1:-76364482 | Msa0573260:CDS |
| GTGGAATAAACAGCAACACA+AGG | 0.656668 | 4_1:+76366875 | None:intergenic |
| ATTGGTGTCGATGGAAACGA+GGG | 0.660984 | 4_1:+76367502 | None:intergenic |
| GCCGCATCTATCGGTTACAT+AGG | 0.663768 | 4_1:-76363044 | Msa0573260:CDS |
| GTTACTGTGACGACGGTGGA+TGG | 0.665951 | 4_1:+76367240 | None:intergenic |
| TAACCTAGCACTAATATTTG+GGG | 0.666744 | 4_1:+76359273 | None:intergenic |
| AGAAGAGAGTCATAGCTTGG+AGG | 0.667067 | 4_1:+76361724 | None:intergenic |
| TGTGACGACGGTGGATGGTG+AGG | 0.667956 | 4_1:+76367245 | None:intergenic |
| GATGGTATTAGTTAACAAGG+TGG | 0.672767 | 4_1:-76359502 | Msa0573260:CDS |
| CATTGCCTTCCGTAACTCTG+GGG | 0.678385 | 4_1:+76363088 | None:intergenic |
| CTGACAAATGGACCACCAGA+CGG | 0.681736 | 4_1:+76361781 | None:intergenic |
| CAGGAGGATATTGTACTCAG+AGG | 0.691793 | 4_1:-76362188 | Msa0573260:CDS |
| GGTGAGAGATTTGCATGCTG+CGG | 0.698451 | 4_1:+76367266 | None:intergenic |
| ACCTATGTAACCGATAGATG+CGG | 0.699426 | 4_1:+76363043 | None:intergenic |
| ATTGACCCCAGAGTTACGGA+AGG | 0.703128 | 4_1:-76363093 | Msa0573260:CDS |
| AAGGTGGTGACAGAACCAGC+TGG | 0.708140 | 4_1:-76359486 | Msa0573260:CDS |
| AATCTACCTTGATCATCACA+GGG | 0.714324 | 4_1:+76365696 | None:intergenic |
| ATTGTGAGTTACTGTGACGA+CGG | 0.719127 | 4_1:+76367233 | None:intergenic |
| GTGAGTTACTGTGACGACGG+TGG | 0.752289 | 4_1:+76367236 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTCATTGAATAAA+CGG | - | chr4_1:76359086-76359105 | Msa0573260:three_prime_UTR | 10.0% |
| !!! | GTTATTTTTTTATTTTTATC+AGG | - | chr4_1:76361501-76361520 | Msa0573260:intron | 10.0% |
| !! | TAAATCAATAAAAAAAAACT+CGG | + | chr4_1:76361959-76361978 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTATTGATTTACT+TGG | - | chr4_1:76361961-76361980 | Msa0573260:intron | 10.0% |
| !!! | TTTTTTTTATTGATTTACTT+GGG | - | chr4_1:76361962-76361981 | Msa0573260:intron | 10.0% |
| !! | AAATAATTAATGGTATTATA+GGG | + | chr4_1:76362711-76362730 | None:intergenic | 10.0% |
| !! | TAAATAATTAATGGTATTAT+AGG | + | chr4_1:76362712-76362731 | None:intergenic | 10.0% |
| !!! | ATTCAAAGTATTTAATAAAT+AGG | - | chr4_1:76365952-76365971 | Msa0573260:CDS | 10.0% |
| !! | TATATTATAAGTAAACAAAA+TGG | + | chr4_1:76366463-76366482 | None:intergenic | 10.0% |
| !! | TTTACAAAATAATTATTGAA+CGG | + | chr4_1:76367427-76367446 | None:intergenic | 10.0% |
| !! | TTAAATTACAGAAACAATTA+TGG | - | chr4_1:76359450-76359469 | Msa0573260:three_prime_UTR | 15.0% |
| !!! | AAAAAATAAGATTTTTGACA+CGG | + | chr4_1:76360052-76360071 | None:intergenic | 15.0% |
| !!! | ATGATATTAGTTTATAAACA+TGG | - | chr4_1:76360524-76360543 | Msa0573260:intron | 15.0% |
| !!! | TGAAAATTTTAAATTTCTTG+TGG | - | chr4_1:76361337-76361356 | Msa0573260:intron | 15.0% |
| !! | AAATGATAAAAACATTTCAA+GGG | + | chr4_1:76361382-76361401 | None:intergenic | 15.0% |
| !!! | TTTATCTGTTTAAAATCAAA+TGG | - | chr4_1:76361803-76361822 | Msa0573260:CDS | 15.0% |
| !!! | ATTAATATTAATTTGAGTTC+AGG | + | chr4_1:76361860-76361879 | None:intergenic | 15.0% |
| !! | AAATCAATAAAAAAAAACTC+GGG | + | chr4_1:76361958-76361977 | None:intergenic | 15.0% |
| !!! | TTTTTTTATTGATTTACTTG+GGG | - | chr4_1:76361963-76361982 | Msa0573260:intron | 15.0% |
| !! | ATGAGATGATAAATAATTAA+TGG | + | chr4_1:76362721-76362740 | None:intergenic | 15.0% |
| !!! | AAAAGATTAAAGTAATGTTT+TGG | - | chr4_1:76363303-76363322 | Msa0573260:intron | 15.0% |
| !! | TTGAAATATCATTACATAAT+GGG | + | chr4_1:76363548-76363567 | None:intergenic | 15.0% |
| !!! | AATTAATTCTTTTGTTTTTG+TGG | - | chr4_1:76364360-76364379 | Msa0573260:intron | 15.0% |
| !!! | ATTAATTCTTTTGTTTTTGT+GGG | - | chr4_1:76364361-76364380 | Msa0573260:intron | 15.0% |
| !!! | ATATGTAATCTTCTATTTTT+TGG | + | chr4_1:76364786-76364805 | None:intergenic | 15.0% |
| !!! | TACTTATAATATACGTTTTA+AGG | - | chr4_1:76366470-76366489 | Msa0573260:intron | 15.0% |
| !!! | ACTTATAATATACGTTTTAA+GGG | - | chr4_1:76366471-76366490 | Msa0573260:intron | 15.0% |
| !!! | ATTGTTGTTAGATTTAGATT+TGG | - | chr4_1:76359187-76359206 | Msa0573260:three_prime_UTR | 20.0% |
| !! | TAGTAATACTAGTAGTATAT+TGG | + | chr4_1:76359270-76359289 | None:intergenic | 20.0% |
| !! | GTTATTATATAAATACCGTT+TGG | - | chr4_1:76360072-76360091 | Msa0573260:intron | 20.0% |
| !! | TTATAAGTAAATTGATGTCA+TGG | + | chr4_1:76360976-76360995 | None:intergenic | 20.0% |
| !! | CAAATGATAAAAACATTTCA+AGG | + | chr4_1:76361383-76361402 | None:intergenic | 20.0% |
| !!! | CTTGAAATGTTTTTATCATT+TGG | - | chr4_1:76361381-76361400 | Msa0573260:intron | 20.0% |
| !! | AATAATTTCACAAACTCTTT+AGG | + | chr4_1:76361720-76361739 | None:intergenic | 20.0% |
| !!! | TTTTGCTTAAATCTGATTAT+AGG | + | chr4_1:76361907-76361926 | None:intergenic | 20.0% |
| !! | AGATTTAAGCAAAAAACTTA+AGG | - | chr4_1:76361913-76361932 | Msa0573260:intron | 20.0% |
| !! | AATCAATAAAAAAAAACTCG+GGG | + | chr4_1:76361957-76361976 | None:intergenic | 20.0% |
| !! | AATTATATCTATAGAGATTG+TGG | - | chr4_1:76362387-76362406 | Msa0573260:intron | 20.0% |
| !! | ATTTATTACAGTAGAGAAAT+AGG | + | chr4_1:76362748-76362767 | None:intergenic | 20.0% |
| !! | TCTACTGTAATAAATACTTA+AGG | - | chr4_1:76362753-76362772 | Msa0573260:intron | 20.0% |
| !! | CTACTGTAATAAATACTTAA+GGG | - | chr4_1:76362754-76362773 | Msa0573260:intron | 20.0% |
| !!! | TTCATCGATTTATGTTTTTA+TGG | - | chr4_1:76362971-76362990 | Msa0573260:CDS | 20.0% |
| !!! | TTTTTATCTTGAATTCACTA+AGG | + | chr4_1:76363210-76363229 | None:intergenic | 20.0% |
| !! | CTTGAAATATCATTACATAA+TGG | + | chr4_1:76363549-76363568 | None:intergenic | 20.0% |
| !! | TAGACAAGTATATTAGAAAT+CGG | + | chr4_1:76363813-76363832 | None:intergenic | 20.0% |
| !! | ATTTCTAATATACTTGTCTA+GGG | - | chr4_1:76363813-76363832 | Msa0573260:intron | 20.0% |
| !!! | TATGATTTTTTCTTATCGAA+TGG | - | chr4_1:76363875-76363894 | Msa0573260:intron | 20.0% |
| !!! | TTTTGTGATTTAACAAACTT+GGG | + | chr4_1:76363914-76363933 | None:intergenic | 20.0% |
| !!! | TTTTTGTGATTTAACAAACT+TGG | + | chr4_1:76363915-76363934 | None:intergenic | 20.0% |
| !! | TGTTAAATCACAAAAATATG+TGG | - | chr4_1:76363919-76363938 | Msa0573260:intron | 20.0% |
| !! | AATCAAATTCAATTGTTAGT+AGG | + | chr4_1:76363990-76364009 | None:intergenic | 20.0% |
| !! | TTGAATTTGATTAACATTAG+CGG | - | chr4_1:76363998-76364017 | Msa0573260:intron | 20.0% |
| !! | TTATTAGACAAACATAAAGA+TGG | + | chr4_1:76364264-76364283 | None:intergenic | 20.0% |
| !! | AGAAGATTACATATATACAT+TGG | - | chr4_1:76364792-76364811 | Msa0573260:intron | 20.0% |
| !! | GAAGATTACATATATACATT+GGG | - | chr4_1:76364793-76364812 | Msa0573260:intron | 20.0% |
| !!! | TTCTTTTTCTCATTTGAAAA+TGG | - | chr4_1:76364834-76364853 | Msa0573260:intron | 20.0% |
| !!! | ATTGAAATTTTGTTGATCTA+TGG | - | chr4_1:76364904-76364923 | Msa0573260:intron | 20.0% |
| !! | TTATAAATATCGATACCAAT+AGG | - | chr4_1:76365528-76365547 | Msa0573260:intron | 20.0% |
| !! | TATAAATATCGATACCAATA+GGG | - | chr4_1:76365529-76365548 | Msa0573260:intron | 20.0% |
| !! | TTGATTGAAATTTGTATTCT+TGG | - | chr4_1:76365638-76365657 | Msa0573260:intron | 20.0% |
| !! | TCTAAATATAAAAGCTTCAT+TGG | - | chr4_1:76365687-76365706 | Msa0573260:intron | 20.0% |
| !! | TCATACAAATCAAGAAAATT+AGG | - | chr4_1:76365716-76365735 | Msa0573260:CDS | 20.0% |
| !! | TTACAAGCCTAATATTTAAA+CGG | + | chr4_1:76365829-76365848 | None:intergenic | 20.0% |
| !! | TTATGATAATCAATTGTTGT+AGG | + | chr4_1:76366611-76366630 | None:intergenic | 20.0% |
| !! | TTGACATAAAATACTATCAA+AGG | + | chr4_1:76366692-76366711 | None:intergenic | 20.0% |
| !!! | ATCACATATAATGGTTTTAA+AGG | + | chr4_1:76366961-76366980 | None:intergenic | 20.0% |
| !! | TATTGAAAGATCACATATAA+TGG | + | chr4_1:76366970-76366989 | None:intergenic | 20.0% |
| !! | TTAAATTTCATCCAATGAAA+GGG | - | chr4_1:76367108-76367127 | Msa0573260:CDS | 20.0% |
| !! | ATTATTGAACGGATAATTAT+GGG | + | chr4_1:76367416-76367435 | None:intergenic | 20.0% |
| !! | AATTATTGAACGGATAATTA+TGG | + | chr4_1:76367417-76367436 | None:intergenic | 20.0% |
| ! | CTGAGATTAAAAGGAAATAA+GGG | - | chr4_1:76359109-76359128 | Msa0573260:three_prime_UTR | 25.0% |
| !!! | TATTTGTTGTGCTGTAATAA+TGG | + | chr4_1:76359168-76359187 | None:intergenic | 25.0% |
| ! | TTGTTAGATTTAGATTTGGA+CGG | - | chr4_1:76359191-76359210 | Msa0573260:three_prime_UTR | 25.0% |
| ! | AAAATGAAAATGTGTTGGAA+TGG | + | chr4_1:76359324-76359343 | None:intergenic | 25.0% |
| ! | ATAGGAAAATGAAAATGTGT+TGG | + | chr4_1:76359329-76359348 | None:intergenic | 25.0% |
| !! | ACACATTTTCATTTTCCTAT+TGG | - | chr4_1:76359329-76359348 | Msa0573260:three_prime_UTR | 25.0% |
| !! | TTTCATTTTCCTATTGGTAT+TGG | - | chr4_1:76359335-76359354 | Msa0573260:three_prime_UTR | 25.0% |
| ! | AATTACAGAAACAATTATGG+AGG | - | chr4_1:76359453-76359472 | Msa0573260:three_prime_UTR | 25.0% |
| !! | TTCTATTCTATGAAAAGTGT+GGG | + | chr4_1:76360028-76360047 | None:intergenic | 25.0% |
| !!! | ATATCATTTTGATGCATTGA+TGG | + | chr4_1:76360511-76360530 | None:intergenic | 25.0% |
| !!! | CAATACTATCATTTTAGTCA+TGG | + | chr4_1:76360646-76360665 | None:intergenic | 25.0% |
| !! | TTTTACCAGATAATTTGAAG+GGG | + | chr4_1:76360757-76360776 | None:intergenic | 25.0% |
| !! | GTTTTACCAGATAATTTGAA+GGG | + | chr4_1:76360758-76360777 | None:intergenic | 25.0% |
| !! | AGTTTTACCAGATAATTTGA+AGG | + | chr4_1:76360759-76360778 | None:intergenic | 25.0% |
| !!! | TTACTGCATTTTTGGTTAAT+TGG | - | chr4_1:76361104-76361123 | Msa0573260:intron | 25.0% |
| ! | AATTGGAATTCAGTTCAAAT+GGG | + | chr4_1:76361141-76361160 | None:intergenic | 25.0% |
| ! | AAATTGGAATTCAGTTCAAA+TGG | + | chr4_1:76361142-76361161 | None:intergenic | 25.0% |
| ! | GACACTAGTATATACATTAT+TGG | + | chr4_1:76361209-76361228 | None:intergenic | 25.0% |
| !!! | ATGTTTTTATCATTTGGAAC+TGG | - | chr4_1:76361387-76361406 | Msa0573260:intron | 25.0% |
| !!! | TTTTTTATTTTTATCAGGGC+TGG | - | chr4_1:76361506-76361525 | Msa0573260:intron | 25.0% |
| !!! | TTTTTATTTTTATCAGGGCT+GGG | - | chr4_1:76361507-76361526 | Msa0573260:intron | 25.0% |
| ! | AGAGTTTGTGAAATTATTAC+AGG | - | chr4_1:76361722-76361741 | Msa0573260:CDS | 25.0% |
| ! | TATGTGTAGATAACTCTAAA+AGG | + | chr4_1:76362637-76362656 | None:intergenic | 25.0% |
| !!! | ACAACACTTATTAGTTTTCT+TGG | + | chr4_1:76362660-76362679 | None:intergenic | 25.0% |
| !! | CTATAAAAGTGCAAGTAATA+AGG | - | chr4_1:76362847-76362866 | Msa0573260:intron | 25.0% |
| ! | CAATGTAATCATTTCAGTTA+GGG | + | chr4_1:76363329-76363348 | None:intergenic | 25.0% |
| ! | ACAATGTAATCATTTCAGTT+AGG | + | chr4_1:76363330-76363349 | None:intergenic | 25.0% |
| ! | TCAATATGACTAATTACTTC+AGG | + | chr4_1:76363580-76363599 | None:intergenic | 25.0% |
| ! | GATTTCTAATATACTTGTCT+AGG | - | chr4_1:76363812-76363831 | Msa0573260:intron | 25.0% |
| ! | TAAATGTACTTGAACCTAAT+AGG | - | chr4_1:76363840-76363859 | Msa0573260:intron | 25.0% |
| ! | TTCAATTGTTAGTAGGTATA+GGG | + | chr4_1:76363983-76364002 | None:intergenic | 25.0% |
| ! | ATTCAATTGTTAGTAGGTAT+AGG | + | chr4_1:76363984-76364003 | None:intergenic | 25.0% |
| !!! | AAATTGTTGATTTATGAGCA+TGG | - | chr4_1:76364196-76364215 | Msa0573260:intron | 25.0% |
| ! | TATGTAATCTATTGTGCATT+AGG | + | chr4_1:76364752-76364771 | None:intergenic | 25.0% |
| ! | TATATATTCGCATTAGATGT+TGG | + | chr4_1:76365205-76365224 | None:intergenic | 25.0% |
| ! | AAAACTAATCGAGTAACAAA+AGG | + | chr4_1:76365233-76365252 | None:intergenic | 25.0% |
| ! | ATATGATAAGTACCTTTGTA+AGG | - | chr4_1:76365364-76365383 | Msa0573260:intron | 25.0% |
| !! | AAGCTTTTATATTTAGAGAC+GGG | + | chr4_1:76365684-76365703 | None:intergenic | 25.0% |
| !! | GAAGCTTTTATATTTAGAGA+CGG | + | chr4_1:76365685-76365704 | None:intergenic | 25.0% |
| ! | TACAAGCCTAATATTTAAAC+GGG | + | chr4_1:76365828-76365847 | None:intergenic | 25.0% |
| ! | ATGAAAAGAGAAAAAAGTTG+AGG | - | chr4_1:76365923-76365942 | Msa0573260:CDS | 25.0% |
| ! | TGAAAAGAGAAAAAAGTTGA+GGG | - | chr4_1:76365924-76365943 | Msa0573260:CDS | 25.0% |
| !! | AACACTTTCAATTTTGTTAC+AGG | - | chr4_1:76366581-76366600 | Msa0573260:CDS | 25.0% |
| !!! | TTTTGAAATCCTGTAATACA+AGG | + | chr4_1:76366753-76366772 | None:intergenic | 25.0% |
| ! | GTATTACAGGATTTCAAAAA+TGG | - | chr4_1:76366754-76366773 | Msa0573260:intron | 25.0% |
| ! | GATCTTTCAATACTATTTCA+TGG | - | chr4_1:76366978-76366997 | Msa0573260:CDS | 25.0% |
| !!! | GTTGAAGTTTTGAGAATATT+TGG | - | chr4_1:76367010-76367029 | Msa0573260:CDS | 25.0% |
| ! | TTCATTGGATGAAATTTAAG+TGG | + | chr4_1:76367107-76367126 | None:intergenic | 25.0% |
| ! | CTTAAATTTCATCCAATGAA+AGG | - | chr4_1:76367107-76367126 | Msa0573260:CDS | 25.0% |
| ! | TAAATTTCATCCAATGAAAG+GGG | - | chr4_1:76367109-76367128 | Msa0573260:CDS | 25.0% |
| ! | ATAACCTAGCACTAATATTT+GGG | + | chr4_1:76367482-76367501 | None:intergenic | 25.0% |
| ! | AAATATTAGTGCTAGGTTAT+GGG | - | chr4_1:76367482-76367501 | Msa0573260:five_prime_UTR | 25.0% |
| !! | ACAACAATCATCTAAAATCA+TGG | + | chr4_1:76367514-76367533 | None:intergenic | 25.0% |
| !! | TATCTAGCAAGTTGAATTTA+AGG | - | chr4_1:76367600-76367619 | Msa0573260:five_prime_UTR | 25.0% |
| AATAAACGGCTGAGATTAAA+AGG | - | chr4_1:76359100-76359119 | Msa0573260:three_prime_UTR | 30.0% | |
| GCTGAGATTAAAAGGAAATA+AGG | - | chr4_1:76359108-76359127 | Msa0573260:three_prime_UTR | 30.0% | |
| AAAATGTGTTGGAATGGAAT+GGG | + | chr4_1:76359318-76359337 | None:intergenic | 30.0% | |
| !!! | ATTTTCCTATTGGTATTGGT+AGG | - | chr4_1:76359339-76359358 | Msa0573260:three_prime_UTR | 30.0% |
| TTATACCTACCAATACCAAT+AGG | + | chr4_1:76359347-76359366 | None:intergenic | 30.0% | |
| !! | ATGAAGAGCATCTTTATCAA+TGG | + | chr4_1:76359901-76359920 | None:intergenic | 30.0% |
| AGATGCTCTTCATGTTAAAT+TGG | - | chr4_1:76359908-76359927 | Msa0573260:intron | 30.0% | |
| CTTCTATTCTATGAAAAGTG+TGG | + | chr4_1:76360029-76360048 | None:intergenic | 30.0% | |
| ! | ATGCACTTGAATTTTCCAAA+CGG | + | chr4_1:76360090-76360109 | None:intergenic | 30.0% |
| TTTAGTGATTCCAAATGTTC+TGG | - | chr4_1:76360162-76360181 | Msa0573260:intron | 30.0% | |
| ! | GATCATGGAGTCAATTTTAT+TGG | - | chr4_1:76360271-76360290 | Msa0573260:intron | 30.0% |
| TGTACAATACTGCATTTGTT+TGG | - | chr4_1:76360325-76360344 | Msa0573260:intron | 30.0% | |
| TCTTGTGACTACTTTAGTTA+AGG | - | chr4_1:76360354-76360373 | Msa0573260:intron | 30.0% | |
| CTTGTGACTACTTTAGTTAA+GGG | - | chr4_1:76360355-76360374 | Msa0573260:intron | 30.0% | |
| !! | AACATGGTGTTATTGTATGA+TGG | - | chr4_1:76360540-76360559 | Msa0573260:intron | 30.0% |
| !! | ACATGGTGTTATTGTATGAT+GGG | - | chr4_1:76360541-76360560 | Msa0573260:intron | 30.0% |
| !! | AAAAATTTCTAGCTACTAGC+TGG | - | chr4_1:76360597-76360616 | Msa0573260:CDS | 30.0% |
| TATTTCCCCTTCAAATTATC+TGG | - | chr4_1:76360749-76360768 | Msa0573260:intron | 30.0% | |
| ! | GAACTGAATTCCAATTTTTC+TGG | - | chr4_1:76361145-76361164 | Msa0573260:intron | 30.0% |
| CAAATGTCAACCAGAAAAAT+TGG | + | chr4_1:76361158-76361177 | None:intergenic | 30.0% | |
| AAATGTAGTAAGTTGTGCTT+TGG | + | chr4_1:76361244-76361263 | None:intergenic | 30.0% | |
| ! | TGTATATTTCTACCGACTAA+GGG | + | chr4_1:76361279-76361298 | None:intergenic | 30.0% |
| ! | ATGTATATTTCTACCGACTA+AGG | + | chr4_1:76361280-76361299 | None:intergenic | 30.0% |
| TTAGTCGGTAGAAATATACA+TGG | - | chr4_1:76361279-76361298 | Msa0573260:intron | 30.0% | |
| TAGTCGGTAGAAATATACAT+GGG | - | chr4_1:76361280-76361299 | Msa0573260:intron | 30.0% | |
| !! | TTTTTATCATTTGGAACTGG+AGG | - | chr4_1:76361390-76361409 | Msa0573260:intron | 30.0% |
| TCAAGGATTAATCCCATAAT+TGG | + | chr4_1:76361474-76361493 | None:intergenic | 30.0% | |
| !! | AAAAAATAACCACTGACTCA+AGG | + | chr4_1:76361491-76361510 | None:intergenic | 30.0% |
| !!! | TTTTATTTTTATCAGGGCTG+GGG | - | chr4_1:76361508-76361527 | Msa0573260:intron | 30.0% |
| CTTACTTAAACCAGTTGAAT+GGG | - | chr4_1:76361577-76361596 | Msa0573260:intron | 30.0% | |
| CTGCAATATAATACAGACTA+TGG | + | chr4_1:76361776-76361795 | None:intergenic | 30.0% | |
| CCATATGCAAACGATAAAAA+GGG | - | chr4_1:76361831-76361850 | Msa0573260:intron | 30.0% | |
| TATAGGTAGATTTGCAACTA+TGG | + | chr4_1:76361890-76361909 | None:intergenic | 30.0% | |
| AAACTTAAGGAAGCAAGAAA+TGG | - | chr4_1:76361926-76361945 | Msa0573260:intron | 30.0% | |
| ! | TCTGTAGCAGAAGAAATTTT+AGG | - | chr4_1:76362052-76362071 | Msa0573260:intron | 30.0% |
| ! | CTGTAGCAGAAGAAATTTTA+GGG | - | chr4_1:76362053-76362072 | Msa0573260:intron | 30.0% |
| TCAATCAGAATCAATTGTGA+AGG | + | chr4_1:76362084-76362103 | None:intergenic | 30.0% | |
| ! | TCACAATTGATTCTGATTGA+AGG | - | chr4_1:76362084-76362103 | Msa0573260:intron | 30.0% |
| ! | CACAATTGATTCTGATTGAA+GGG | - | chr4_1:76362085-76362104 | Msa0573260:intron | 30.0% |
| TGAAATTGCAGATTTCAGAA+GGG | + | chr4_1:76362334-76362353 | None:intergenic | 30.0% | |
| CTTCTCATCAATGCAATAAT+TGG | - | chr4_1:76362459-76362478 | Msa0573260:intron | 30.0% | |
| AAAGTGCAAGTAATAAGGAA+TGG | - | chr4_1:76362852-76362871 | Msa0573260:intron | 30.0% | |
| ! | TATAATTCCGTGAGCTTTAA+TGG | - | chr4_1:76362913-76362932 | Msa0573260:intron | 30.0% |
| !! | TTTATGTTTTTATGGCTTGC+AGG | - | chr4_1:76362979-76362998 | Msa0573260:CDS | 30.0% |
| ! | TATGGTAATGTTGTTCACTT+TGG | - | chr4_1:76363016-76363035 | Msa0573260:CDS | 30.0% |
| TATCTTGAATTCACTAAGGT+GGG | + | chr4_1:76363206-76363225 | None:intergenic | 30.0% | |
| TTATCTTGAATTCACTAAGG+TGG | + | chr4_1:76363207-76363226 | None:intergenic | 30.0% | |
| CAATTAAAAGACCTTGAACT+TGG | - | chr4_1:76363455-76363474 | Msa0573260:intron | 30.0% | |
| CATATGATAAACCAAGTTCA+AGG | + | chr4_1:76363469-76363488 | None:intergenic | 30.0% | |
| CTTGAACTTGGTTTATCATA+TGG | - | chr4_1:76363467-76363486 | Msa0573260:intron | 30.0% | |
| ! | TTATCGAATGGATTTGTACT+CGG | - | chr4_1:76363887-76363906 | Msa0573260:intron | 30.0% |
| AATAAGAGCTCATCATGTAT+AGG | - | chr4_1:76364111-76364130 | Msa0573260:intron | 30.0% | |
| GACAAACATAAAGATGGTAA+TGG | + | chr4_1:76364258-76364277 | None:intergenic | 30.0% | |
| CTATCAAAAGTTCTTGTCTA+GGG | + | chr4_1:76364291-76364310 | None:intergenic | 30.0% | |
| TCTATCAAAAGTTCTTGTCT+AGG | + | chr4_1:76364292-76364311 | None:intergenic | 30.0% | |
| CTCACAAAAAATTGAACATG+TGG | + | chr4_1:76364320-76364339 | None:intergenic | 30.0% | |
| !!! | CACATGTTCAATTTTTTGTG+AGG | - | chr4_1:76364318-76364337 | Msa0573260:intron | 30.0% |
| !!! | AATTCTTTTGTTTTTGTGGG+TGG | - | chr4_1:76364364-76364383 | Msa0573260:intron | 30.0% |
| !!! | ATTCTTTTGTTTTTGTGGGT+GGG | - | chr4_1:76364365-76364384 | Msa0573260:intron | 30.0% |
| !! | CTTATCATTGTTTTTCCTAC+AGG | - | chr4_1:76364544-76364563 | Msa0573260:intron | 30.0% |
| ! | AATGCAGAAGATGCTTTTAA+GGG | - | chr4_1:76364608-76364627 | Msa0573260:intron | 30.0% |
| ACCATAAAATCCAAAACACT+TGG | + | chr4_1:76364864-76364883 | None:intergenic | 30.0% | |
| ! | ATTTTCTCCTTTCAAACAAC+AGG | - | chr4_1:76364928-76364947 | Msa0573260:intron | 30.0% |
| ! | AATTCTACCTGTTGTTTGAA+AGG | + | chr4_1:76364938-76364957 | None:intergenic | 30.0% |
| CAACATAATCGGGATAAATA+TGG | + | chr4_1:76365005-76365024 | None:intergenic | 30.0% | |
| ATAAGTACCTTTGTAAGGTT+TGG | - | chr4_1:76365369-76365388 | Msa0573260:intron | 30.0% | |
| ! | TTTGGGATTTACGTAATGAT+AGG | - | chr4_1:76365505-76365524 | Msa0573260:intron | 30.0% |
| GAAAATAGTTATCACCCTAT+TGG | + | chr4_1:76365546-76365565 | None:intergenic | 30.0% | |
| TAACATTAGCTGATTGTACA+AGG | - | chr4_1:76365578-76365597 | Msa0573260:intron | 30.0% | |
| ! | TTTTATATTTAGAGACGGGA+CGG | + | chr4_1:76365680-76365699 | None:intergenic | 30.0% |
| TCACTACCCGTTTAAATATT+AGG | - | chr4_1:76365819-76365838 | Msa0573260:intron | 30.0% | |
| GAAAAGAGAAAAAAGTTGAG+GGG | - | chr4_1:76365925-76365944 | Msa0573260:CDS | 30.0% | |
| TTGTGTCTTGAGATATGATA+TGG | - | chr4_1:76366040-76366059 | Msa0573260:intron | 30.0% | |
| !!! | TCAATTGCTTTTTCTCTAGT+CGG | + | chr4_1:76366161-76366180 | None:intergenic | 30.0% |
| ATCCTTTAGATATCTGTACT+TGG | - | chr4_1:76366250-76366269 | Msa0573260:intron | 30.0% | |
| ! | AGAACAAAGGAGTTTGTTTA+AGG | - | chr4_1:76366358-76366377 | Msa0573260:intron | 30.0% |
| AAAGCTAAGAGTTTAAACCA+AGG | + | chr4_1:76366548-76366567 | None:intergenic | 30.0% | |
| TAAACTTATCCTTGACATAG+AGG | - | chr4_1:76366628-76366647 | Msa0573260:intron | 30.0% | |
| ATGCAATATCCTTGTATTAC+AGG | - | chr4_1:76366741-76366760 | Msa0573260:intron | 30.0% | |
| TCAAAATTATATCTCCCTGT+TGG | - | chr4_1:76366876-76366895 | Msa0573260:CDS | 30.0% | |
| TTGATAGGAAAACACTTGAT+AGG | - | chr4_1:76366917-76366936 | Msa0573260:CDS | 30.0% | |
| CAATACTATTTCATGGCTAA+TGG | - | chr4_1:76366985-76367004 | Msa0573260:CDS | 30.0% | |
| TTCAACACTTCTTCTCTTAT+TGG | - | chr4_1:76367057-76367076 | Msa0573260:CDS | 30.0% | |
| GAAGATGGTATTAGTTAACA+AGG | - | chr4_1:76367246-76367265 | Msa0573260:CDS | 30.0% | |
| AGATAGTCATAATATCCATC+AGG | + | chr4_1:76367299-76367318 | None:intergenic | 30.0% | |
| CAACAGTGCAAATTCTTTAT+AGG | + | chr4_1:76367332-76367351 | None:intergenic | 30.0% | |
| TAACCTAGCACTAATATTTG+GGG | + | chr4_1:76367481-76367500 | None:intergenic | 30.0% | |
| CATAACCTAGCACTAATATT+TGG | + | chr4_1:76367483-76367502 | None:intergenic | 30.0% | |
| CAAATATTAGTGCTAGGTTA+TGG | - | chr4_1:76367481-76367500 | Msa0573260:five_prime_UTR | 30.0% | |
| !! | TAGTAGTATATTGGTGTCGA+TGG | + | chr4_1:76359261-76359280 | None:intergenic | 35.0% |
| AAATGTGTTGGAATGGAATG+GGG | + | chr4_1:76359317-76359336 | None:intergenic | 35.0% | |
| GAAAATGTGTTGGAATGGAA+TGG | + | chr4_1:76359319-76359338 | None:intergenic | 35.0% | |
| AACAGAGATAGTGAATGTGA+TGG | + | chr4_1:76359432-76359451 | None:intergenic | 35.0% | |
| TTCTGAATCTGATTGATCCA+AGG | - | chr4_1:76359611-76359630 | Msa0573260:intron | 35.0% | |
| TCTGAATCTGATTGATCCAA+GGG | - | chr4_1:76359612-76359631 | Msa0573260:intron | 35.0% | |
| TTGATCCAAGGGTTTATTTG+CGG | - | chr4_1:76359623-76359642 | Msa0573260:intron | 35.0% | |
| !! | AAACTTCACCTTATTGGTTC+CGG | + | chr4_1:76359709-76359728 | None:intergenic | 35.0% |
| ! | TTGTCGTCTTGACAAGATTT+TGG | - | chr4_1:76359794-76359813 | Msa0573260:intron | 35.0% |
| TATTCGTACTGCTCATGAAT+TGG | - | chr4_1:76359848-76359867 | Msa0573260:intron | 35.0% | |
| ATTCGTACTGCTCATGAATT+GGG | - | chr4_1:76359849-76359868 | Msa0573260:intron | 35.0% | |
| !! | AAGAGCATCTTTATCAATGG+TGG | + | chr4_1:76359898-76359917 | None:intergenic | 35.0% |
| GCTGATGAATCTGTTTGTAT+TGG | - | chr4_1:76359930-76359949 | Msa0573260:intron | 35.0% | |
| GTTAGTATAGTACGTACGAT+TGG | + | chr4_1:76359971-76359990 | None:intergenic | 35.0% | |
| ! | TTTCTTTCTTTTCTCTGTGC+AGG | - | chr4_1:76360137-76360156 | Msa0573260:CDS | 35.0% |
| GTTGAAATGTGTAGAGATCA+TGG | - | chr4_1:76360256-76360275 | Msa0573260:intron | 35.0% | |
| !! | CATGGTGTTATTGTATGATG+GGG | - | chr4_1:76360542-76360561 | Msa0573260:intron | 35.0% |
| !! | TTTGTTTTCTGCAATCATCG+AGG | + | chr4_1:76360580-76360599 | None:intergenic | 35.0% |
| !! | AGCTGGTAAGAAAGTTTTGT+TGG | - | chr4_1:76360614-76360633 | Msa0573260:intron | 35.0% |
| GCAGGTATAATATTAGACAC+TGG | - | chr4_1:76360897-76360916 | Msa0573260:intron | 35.0% | |
| AATCTACCTTGATCATCACA+GGG | + | chr4_1:76361058-76361077 | None:intergenic | 35.0% | |
| !! | TTGTTTTTCTGTCCCTTAGT+CGG | - | chr4_1:76361264-76361283 | Msa0573260:intron | 35.0% |
| ACAGTCTTTCACGATATGTT+TGG | - | chr4_1:76361551-76361570 | Msa0573260:intron | 35.0% | |
| GCTTACTTAAACCAGTTGAA+TGG | - | chr4_1:76361576-76361595 | Msa0573260:intron | 35.0% | |
| CTTTGCACATGAACATTACA+TGG | + | chr4_1:76361603-76361622 | None:intergenic | 35.0% | |
| TTTCCCTTTGCCAATTTATG+TGG | - | chr4_1:76361623-76361642 | Msa0573260:intron | 35.0% | |
| AGTCCACATAAATTGGCAAA+GGG | + | chr4_1:76361629-76361648 | None:intergenic | 35.0% | |
| GTTTGTCAGTCCACATAAAT+TGG | + | chr4_1:76361636-76361655 | None:intergenic | 35.0% | |
| ! | TATGTGGACTGACAAACATA+CGG | - | chr4_1:76361639-76361658 | Msa0573260:intron | 35.0% |
| GCCATATGCAAACGATAAAA+AGG | - | chr4_1:76361830-76361849 | Msa0573260:intron | 35.0% | |
| ! | CCCTTTTTATCGTTTGCATA+TGG | + | chr4_1:76361834-76361853 | None:intergenic | 35.0% |
| TAGAGTTTATCCCATTGATG+AGG | - | chr4_1:76362136-76362155 | Msa0573260:CDS | 35.0% | |
| CACACATATTCCTCATCAAT+GGG | + | chr4_1:76362149-76362168 | None:intergenic | 35.0% | |
| ACACACATATTCCTCATCAA+TGG | + | chr4_1:76362150-76362169 | None:intergenic | 35.0% | |
| ! | TGGAAATGATGGGGTTTATT+TGG | - | chr4_1:76362246-76362265 | Msa0573260:intron | 35.0% |
| ! | AGAAGTACATTCAAAACCCA+AGG | - | chr4_1:76362269-76362288 | Msa0573260:intron | 35.0% |
| GTGAAATTGCAGATTTCAGA+AGG | + | chr4_1:76362335-76362354 | None:intergenic | 35.0% | |
| TATAGAGATTGTGGATCCAA+AGG | - | chr4_1:76362396-76362415 | Msa0573260:intron | 35.0% | |
| ! | TTGCATTGATGAGAAGTTTG+AGG | + | chr4_1:76362455-76362474 | None:intergenic | 35.0% |
| ATTCTATTTCAGAGCTTCCA+AGG | + | chr4_1:76362520-76362539 | None:intergenic | 35.0% | |
| TGCAAGTAATAAGGAATGGA+GGG | - | chr4_1:76362856-76362875 | Msa0573260:intron | 35.0% | |
| AAGCTCACGGAATTATAAAG+TGG | + | chr4_1:76362910-76362929 | None:intergenic | 35.0% | |
| CAGGTTCTTGCAGATAAATA+TGG | - | chr4_1:76362998-76363017 | Msa0573260:CDS | 35.0% | |
| TACAGACAGATAAGAGATTG+AGG | + | chr4_1:76363081-76363100 | None:intergenic | 35.0% | |
| ! | ATATGAGATGCTTTTCTGAC+TGG | - | chr4_1:76363251-76363270 | Msa0573260:intron | 35.0% |
| GTAACTAATGCTGATATTGC+TGG | - | chr4_1:76363412-76363431 | Msa0573260:intron | 35.0% | |
| ! | TGACTGTGATTTTTATGCAG+AGG | - | chr4_1:76363597-76363616 | Msa0573260:intron | 35.0% |
| ! | TTGAGTTCCTTTTGGATGAA+AGG | - | chr4_1:76363741-76363760 | Msa0573260:CDS | 35.0% |
| ! | TGAGTTCCTTTTGGATGAAA+GGG | - | chr4_1:76363742-76363761 | Msa0573260:CDS | 35.0% |
| ! | AAGGGGTTCTTTTTACTTCA+TGG | - | chr4_1:76363760-76363779 | Msa0573260:intron | 35.0% |
| ! | ATTAGAAATCGGTTTCAACC+TGG | + | chr4_1:76363802-76363821 | None:intergenic | 35.0% |
| ! | TATCGAATGGATTTGTACTC+GGG | - | chr4_1:76363888-76363907 | Msa0573260:intron | 35.0% |
| ATTGTTAGTAGGTATAGGGT+AGG | + | chr4_1:76363979-76363998 | None:intergenic | 35.0% | |
| TAATGTGCAGGTAATTGGTA+TGG | - | chr4_1:76364079-76364098 | Msa0573260:intron | 35.0% | |
| AATGTGCAGGTAATTGGTAT+GGG | - | chr4_1:76364080-76364099 | Msa0573260:intron | 35.0% | |
| !!! | TTCTTTTGTTTTTGTGGGTG+GGG | - | chr4_1:76364366-76364385 | Msa0573260:intron | 35.0% |
| TGAGGAAATCATTTCTGTCA+CGG | + | chr4_1:76364420-76364439 | None:intergenic | 35.0% | |
| CTCTTCTATCAAATCAACTG+AGG | + | chr4_1:76364438-76364457 | None:intergenic | 35.0% | |
| AGAAAAGCTTCGATACAAAC+AGG | - | chr4_1:76364478-76364497 | Msa0573260:CDS | 35.0% | |
| !! | ATCATTGTTTTTCCTACAGG+AGG | - | chr4_1:76364547-76364566 | Msa0573260:intron | 35.0% |
| ! | AAGCATCTTCTGCATTGATA+CGG | + | chr4_1:76364604-76364623 | None:intergenic | 35.0% |
| ! | CAATGCAGAAGATGCTTTTA+AGG | - | chr4_1:76364607-76364626 | Msa0573260:intron | 35.0% |
| !! | CTTTTAAGGGATTTAGACCA+GGG | - | chr4_1:76364621-76364640 | Msa0573260:intron | 35.0% |
| !! | AAATGGTTTGCCAAGTGTTT+TGG | - | chr4_1:76364851-76364870 | Msa0573260:intron | 35.0% |
| !! | GCCAAGTGTTTTGGATTTTA+TGG | - | chr4_1:76364860-76364879 | Msa0573260:intron | 35.0% |
| ATGTTACGAAGAGAACAGAT+TGG | + | chr4_1:76365065-76365084 | None:intergenic | 35.0% | |
| TTAAGTTTGTCAGCGAATGT+TGG | - | chr4_1:76365252-76365271 | Msa0573260:intron | 35.0% | |
| ACGAGTCAAATTCTTAGCTT+CGG | + | chr4_1:76365285-76365304 | None:intergenic | 35.0% | |
| TATCATATTACCCACCAATG+AGG | + | chr4_1:76365352-76365371 | None:intergenic | 35.0% | |
| GAATCAACCAAACCTTACAA+AGG | + | chr4_1:76365379-76365398 | None:intergenic | 35.0% | |
| ! | TAAGGTTTGGTTGATTCTTG+AGG | - | chr4_1:76365382-76365401 | Msa0573260:intron | 35.0% |
| TTTATATTTAGAGACGGGAC+GGG | + | chr4_1:76365679-76365698 | None:intergenic | 35.0% | |
| ATTCAATGTTGTCATCACTC+AGG | + | chr4_1:76365857-76365876 | None:intergenic | 35.0% | |
| !! | ATTTCCACTTGACTTGTGTA+GGG | + | chr4_1:76365894-76365913 | None:intergenic | 35.0% |
| ! | ACTTTTTGCAGCTGATTGTA+TGG | - | chr4_1:76366132-76366151 | Msa0573260:intron | 35.0% |
| ! | CTTTTTGCAGCTGATTGTAT+GGG | - | chr4_1:76366133-76366152 | Msa0573260:intron | 35.0% |
| AAGCAATTGAACGCATGAAA+AGG | - | chr4_1:76366171-76366190 | Msa0573260:intron | 35.0% | |
| AGCAATTGAACGCATGAAAA+GGG | - | chr4_1:76366172-76366191 | Msa0573260:intron | 35.0% | |
| CACCAAGTACAGATATCTAA+AGG | + | chr4_1:76366255-76366274 | None:intergenic | 35.0% | |
| ! | TTTGACTTCCATCAATTTCC+TGG | + | chr4_1:76366300-76366319 | None:intergenic | 35.0% |
| GTTTGCAAAGTGAATGAACA+AGG | + | chr4_1:76366338-76366357 | None:intergenic | 35.0% | |
| TCACTTTGCAAACAGAACAA+AGG | - | chr4_1:76366345-76366364 | Msa0573260:intron | 35.0% | |
| ! | AGTTGCAGTTTTCTGATCTT+AGG | - | chr4_1:76366416-76366435 | Msa0573260:intron | 35.0% |
| ! | GTTGCAGTTTTCTGATCTTA+GGG | - | chr4_1:76366417-76366436 | Msa0573260:intron | 35.0% |
| ! | GCAGTTCTTTTCAAAACAGA+AGG | + | chr4_1:76366512-76366531 | None:intergenic | 35.0% |
| ACAGGATTTCAAAAATGGCA+AGG | - | chr4_1:76366759-76366778 | Msa0573260:intron | 35.0% | |
| ATATTTATGTACCCTAGCGA+TGG | - | chr4_1:76366850-76366869 | Msa0573260:CDS | 35.0% | |
| !! | AATTTTGAAAGCCATCGCTA+GGG | + | chr4_1:76366864-76366883 | None:intergenic | 35.0% |
| !! | TAATTTTGAAAGCCATCGCT+AGG | + | chr4_1:76366865-76366884 | None:intergenic | 35.0% |
| !!! | TGCTGTGGAAATGTTTTGAT+AGG | - | chr4_1:76366902-76366921 | Msa0573260:CDS | 35.0% |
| TAATACCATCTTCTGTTGTG+GGG | + | chr4_1:76367239-76367258 | None:intergenic | 35.0% | |
| CTAATACCATCTTCTGTTGT+GGG | + | chr4_1:76367240-76367259 | None:intergenic | 35.0% | |
| ACTAATACCATCTTCTGTTG+TGG | + | chr4_1:76367241-76367260 | None:intergenic | 35.0% | |
| GATGGTATTAGTTAACAAGG+TGG | - | chr4_1:76367249-76367268 | Msa0573260:CDS | 35.0% | |
| CAGTGCAAATTCTTTATAGG+AGG | + | chr4_1:76367329-76367348 | None:intergenic | 35.0% | |
| AAATAAGGGCTAAGTTGCTG+AGG | - | chr4_1:76359123-76359142 | Msa0573260:three_prime_UTR | 40.0% | |
| AATGTGTTGGAATGGAATGG+GGG | + | chr4_1:76359316-76359335 | None:intergenic | 40.0% | |
| ATTGTGAGTTACTGTGACGA+CGG | + | chr4_1:76359521-76359540 | None:intergenic | 40.0% | |
| TTTCACTGCACTTTCTTGAC+CGG | - | chr4_1:76359687-76359706 | Msa0573260:intron | 40.0% | |
| TTTCTTGACCGGAACCAATA+AGG | - | chr4_1:76359698-76359717 | Msa0573260:intron | 40.0% | |
| !!! | AAGATTTTGGTTGCCAATCG+AGG | - | chr4_1:76359807-76359826 | Msa0573260:intron | 40.0% |
| TTCGTACTGCTCATGAATTG+GGG | - | chr4_1:76359850-76359869 | Msa0573260:intron | 40.0% | |
| GTGGAATAAACAGCAACACA+AGG | + | chr4_1:76359879-76359898 | None:intergenic | 40.0% | |
| GATGCAACATTGTACATTGG+CGG | + | chr4_1:76360201-76360220 | None:intergenic | 40.0% | |
| CAGGATGCAACATTGTACAT+TGG | + | chr4_1:76360204-76360223 | None:intergenic | 40.0% | |
| CAATGTACAATGTTGCATCC+TGG | - | chr4_1:76360202-76360221 | Msa0573260:intron | 40.0% | |
| ACAATGTTGCATCCTGGATA+TGG | - | chr4_1:76360208-76360227 | Msa0573260:intron | 40.0% | |
| TCAGCAAGAAAACCATATCC+AGG | + | chr4_1:76360223-76360242 | None:intergenic | 40.0% | |
| TTTATTGGACCTAACGTGAG+TGG | - | chr4_1:76360286-76360305 | Msa0573260:intron | 40.0% | |
| ATTGTACAAGATGCAGAGTC+TGG | + | chr4_1:76360313-76360332 | None:intergenic | 40.0% | |
| CAATCTACCTTGATCATCAC+AGG | + | chr4_1:76361059-76361078 | None:intergenic | 40.0% | |
| CTGTGATGATCAAGGTAGAT+TGG | - | chr4_1:76361057-76361076 | Msa0573260:intron | 40.0% | |
| ! | TGCACAGCTTACTGCATTTT+TGG | - | chr4_1:76361096-76361115 | Msa0573260:intron | 40.0% |
| TTCAGTTCAAATGGGCACAA+GGG | + | chr4_1:76361133-76361152 | None:intergenic | 40.0% | |
| ATTCAGTTCAAATGGGCACA+AGG | + | chr4_1:76361134-76361153 | None:intergenic | 40.0% | |
| TGTAGTAAGTTGTGCTTTGG+AGG | + | chr4_1:76361241-76361260 | None:intergenic | 40.0% | |
| ! | GAACTGGAGGTTTTTGTTCT+AGG | - | chr4_1:76361403-76361422 | Msa0573260:intron | 40.0% |
| CTAGGAACTTTGATACCAGT+AGG | - | chr4_1:76361421-76361440 | Msa0573260:intron | 40.0% | |
| CAGTCCACATAAATTGGCAA+AGG | + | chr4_1:76361630-76361649 | None:intergenic | 40.0% | |
| ACAAACATACGGTGTTTCTC+AGG | - | chr4_1:76361650-76361669 | Msa0573260:intron | 40.0% | |
| ! | TACAGGTATTTGTTGCTGTG+TGG | - | chr4_1:76361739-76361758 | Msa0573260:CDS | 40.0% |
| AGAAACCTTCTTCTACCTGT+TGG | + | chr4_1:76361989-76362008 | None:intergenic | 40.0% | |
| AGGTAGAAGAAGGTTTCTTG+CGG | - | chr4_1:76361991-76362010 | Msa0573260:intron | 40.0% | |
| CAGAATCAATTGTGAAGGTC+TGG | + | chr4_1:76362079-76362098 | None:intergenic | 40.0% | |
| !!! | TGTGTGTGTGTGTGCTTTTT+TGG | - | chr4_1:76362165-76362184 | Msa0573260:CDS | 40.0% |
| TTTACAGCAAGCTAAGAGTG+AGG | - | chr4_1:76362210-76362229 | Msa0573260:intron | 40.0% | |
| CTGCTGCATTTGGAAATGAT+GGG | - | chr4_1:76362236-76362255 | Msa0573260:intron | 40.0% | |
| TGCTGCATTTGGAAATGATG+GGG | - | chr4_1:76362237-76362256 | Msa0573260:intron | 40.0% | |
| GCAGATTTCAGAAGGGAATA+GGG | + | chr4_1:76362327-76362346 | None:intergenic | 40.0% | |
| TGCAGATTTCAGAAGGGAAT+AGG | + | chr4_1:76362328-76362347 | None:intergenic | 40.0% | |
| TCTGCAATTTCACTGTAACC+TGG | - | chr4_1:76362342-76362361 | Msa0573260:CDS | 40.0% | |
| CTGCAATTTCACTGTAACCT+GGG | - | chr4_1:76362343-76362362 | Msa0573260:CDS | 40.0% | |
| TGCAATTTCACTGTAACCTG+GGG | - | chr4_1:76362344-76362363 | Msa0573260:CDS | 40.0% | |
| CTATAGATATAATTCCCCCG+AGG | + | chr4_1:76362381-76362400 | None:intergenic | 40.0% | |
| GGATCCAAAGGAAACATTCA+AGG | - | chr4_1:76362408-76362427 | Msa0573260:intron | 40.0% | |
| CCTACCTTGAATGTTTCCTT+TGG | + | chr4_1:76362415-76362434 | None:intergenic | 40.0% | |
| CCAAAGGAAACATTCAAGGT+AGG | - | chr4_1:76362412-76362431 | Msa0573260:intron | 40.0% | |
| GACAACTAAGAACGAACAGA+GGG | + | chr4_1:76362615-76362634 | None:intergenic | 40.0% | |
| CGACAAGTAGATAAGAGCAA+AGG | - | chr4_1:76362820-76362839 | Msa0573260:intron | 40.0% | |
| GTGCAAGTAATAAGGAATGG+AGG | - | chr4_1:76362855-76362874 | Msa0573260:intron | 40.0% | |
| CACGGAATTATAAAGTGGTC+AGG | + | chr4_1:76362905-76362924 | None:intergenic | 40.0% | |
| ! | GGATACTAGTTCAAAGTACC+TGG | + | chr4_1:76363060-76363079 | None:intergenic | 40.0% |
| CACACTTGTGAAATTCCACA+GGG | + | chr4_1:76363393-76363412 | None:intergenic | 40.0% | |
| ACACACTTGTGAAATTCCAC+AGG | + | chr4_1:76363394-76363413 | None:intergenic | 40.0% | |
| ACTAATGCTGATATTGCTGG+AGG | - | chr4_1:76363415-76363434 | Msa0573260:intron | 40.0% | |
| ACCTATGTAACCGATAGATG+CGG | + | chr4_1:76363711-76363730 | None:intergenic | 40.0% | |
| ! | TCTATCGGTTACATAGGTGT+TGG | - | chr4_1:76363713-76363732 | Msa0573260:CDS | 40.0% |
| ! | GAGTTCCTTTTGGATGAAAG+GGG | - | chr4_1:76363743-76363762 | Msa0573260:CDS | 40.0% |
| AAGAACCCCTTTCATCCAAA+AGG | + | chr4_1:76363751-76363770 | None:intergenic | 40.0% | |
| TATGCACAGCAGAACCTATT+AGG | + | chr4_1:76363857-76363876 | None:intergenic | 40.0% | |
| TTAGTAGGTATAGGGTAGGT+CGG | + | chr4_1:76363975-76363994 | None:intergenic | 40.0% | |
| AACACAGTAAAGAGAGAGCA+TGG | - | chr4_1:76364046-76364065 | Msa0573260:intron | 40.0% | |
| ATGTGCAGGTAATTGGTATG+GGG | - | chr4_1:76364081-76364100 | Msa0573260:intron | 40.0% | |
| TGTTGCTATCTGTGCAAGTA+TGG | - | chr4_1:76364151-76364170 | Msa0573260:intron | 40.0% | |
| GTTGCTATCTGTGCAAGTAT+GGG | - | chr4_1:76364152-76364171 | Msa0573260:intron | 40.0% | |
| TATCTGTGCAAGTATGGGTT+TGG | - | chr4_1:76364157-76364176 | Msa0573260:intron | 40.0% | |
| ATCTGTGCAAGTATGGGTTT+GGG | - | chr4_1:76364158-76364177 | Msa0573260:intron | 40.0% | |
| !! | GATGGTAATGGATGAGATGA+AGG | + | chr4_1:76364246-76364265 | None:intergenic | 40.0% |
| !! | TGAGGTGTGCTGATTAGTTT+CGG | - | chr4_1:76364336-76364355 | Msa0573260:intron | 40.0% |
| !!! | TCTTTTGTTTTTGTGGGTGG+GGG | - | chr4_1:76364367-76364386 | Msa0573260:intron | 40.0% |
| GAGGAAATCATTTCTGTCAC+GGG | + | chr4_1:76364419-76364438 | None:intergenic | 40.0% | |
| AGAGCAAATTCGTGTAGCTA+TGG | - | chr4_1:76364454-76364473 | Msa0573260:intron | 40.0% | |
| GAGCAAATTCGTGTAGCTAT+GGG | - | chr4_1:76364455-76364474 | Msa0573260:intron | 40.0% | |
| TGAGTACAATATCCTCCTGT+AGG | + | chr4_1:76364562-76364581 | None:intergenic | 40.0% | |
| ! | TGCATTGATACGGCATTCAA+TGG | + | chr4_1:76364594-76364613 | None:intergenic | 40.0% |
| !! | GCTTTTAAGGGATTTAGACC+AGG | - | chr4_1:76364620-76364639 | Msa0573260:intron | 40.0% |
| CTCTGATACATCAAGATACC+TGG | + | chr4_1:76364647-76364666 | None:intergenic | 40.0% | |
| CAGGTATCTTGATGTATCAG+AGG | - | chr4_1:76364645-76364664 | Msa0573260:intron | 40.0% | |
| TTAGGTAAATGTTACAGCCG+AGG | + | chr4_1:76364734-76364753 | None:intergenic | 40.0% | |
| CTTGGAGGAACAACATAATC+GGG | + | chr4_1:76365015-76365034 | None:intergenic | 40.0% | |
| GCTTGGAGGAACAACATAAT+CGG | + | chr4_1:76365016-76365035 | None:intergenic | 40.0% | |
| CTATGACTCTCTTCTTGGAA+AGG | - | chr4_1:76365035-76365054 | Msa0573260:CDS | 40.0% | |
| GTAGTATAGCAACTGAGATG+CGG | + | chr4_1:76365099-76365118 | None:intergenic | 40.0% | |
| ACTCGTTTCTTGCAAGAATG+TGG | - | chr4_1:76365299-76365318 | Msa0573260:intron | 40.0% | |
| CTCGTTTCTTGCAAGAATGT+GGG | - | chr4_1:76365300-76365319 | Msa0573260:intron | 40.0% | |
| !! | CTACGTGAGTTTTGTCTATG+TGG | + | chr4_1:76365427-76365446 | None:intergenic | 40.0% |
| GTAGTGACTCTTGATAGAAG+TGG | + | chr4_1:76365806-76365825 | None:intergenic | 40.0% | |
| !! | GATTTCCACTTGACTTGTGT+AGG | + | chr4_1:76365895-76365914 | None:intergenic | 40.0% |
| AGTCAAGTGGAAATCATCGA+TGG | - | chr4_1:76365900-76365919 | Msa0573260:CDS | 40.0% | |
| AGTGAACTGTGAAACACATG+TGG | + | chr4_1:76365990-76366009 | None:intergenic | 40.0% | |
| CTCGATGACACTATTATCAC+AGG | - | chr4_1:76366197-76366216 | Msa0573260:intron | 40.0% | |
| AGTGAATGAACAAGGTGCAA+AGG | + | chr4_1:76366330-76366349 | None:intergenic | 40.0% | |
| ! | TGCAGTTTGAAGCAAATTGC+AGG | - | chr4_1:76366393-76366412 | Msa0573260:intron | 40.0% |
| ! | CTGCAGATGATAATGATCCT+TGG | - | chr4_1:76366528-76366547 | Msa0573260:CDS | 40.0% |
| CTTATCCTTGACATAGAGGT+AGG | - | chr4_1:76366632-76366651 | Msa0573260:intron | 40.0% | |
| ! | TGCTTTTATTCCAAAGCACG+AGG | - | chr4_1:76366789-76366808 | Msa0573260:intron | 40.0% |
| ! | TTTTATTCCAAAGCACGAGG+AGG | - | chr4_1:76366792-76366811 | Msa0573260:intron | 40.0% |
| GCTGAAATTCATGTAGCTGT+GGG | - | chr4_1:76367079-76367098 | Msa0573260:CDS | 40.0% | |
| TTCAACACTACCCCTTTCAT+TGG | + | chr4_1:76367122-76367141 | None:intergenic | 40.0% | |
| AATACCATCTTCTGTTGTGG+GGG | + | chr4_1:76367238-76367257 | None:intergenic | 40.0% | |
| TCACCCCAAATATTAGTGCT+AGG | - | chr4_1:76367475-76367494 | Msa0573260:five_prime_UTR | 40.0% | |
| ! | TAATGGACCTTGCCTCTTGT+TGG | + | chr4_1:76359151-76359170 | None:intergenic | 45.0% |
| !! | ATTGGTGTCGATGGAAACGA+GGG | + | chr4_1:76359252-76359271 | None:intergenic | 45.0% |
| !! | TATTGGTGTCGATGGAAACG+AGG | + | chr4_1:76359253-76359272 | None:intergenic | 45.0% |
| CCTCGGAAACTTCACCTTAT+TGG | + | chr4_1:76359715-76359734 | None:intergenic | 45.0% | |
| CCAATAAGGTGAAGTTTCCG+AGG | - | chr4_1:76359712-76359731 | Msa0573260:intron | 45.0% | |
| ! | CAAGGTTGAGTAGTTTGCCT+CGG | + | chr4_1:76359732-76359751 | None:intergenic | 45.0% |
| ! | AGTACGTACGATTGGCTACT+GGG | + | chr4_1:76359963-76359982 | None:intergenic | 45.0% |
| ! | TAGTACGTACGATTGGCTAC+TGG | + | chr4_1:76359964-76359983 | None:intergenic | 45.0% |
| ! | TGCATTGATGGCTTACTGAC+TGG | + | chr4_1:76360499-76360518 | None:intergenic | 45.0% |
| TACTGTCAGGCTGAAAGGTT+TGG | + | chr4_1:76360792-76360811 | None:intergenic | 45.0% | |
| CCTTTCAGCCTGACAGTATT+CGG | - | chr4_1:76360794-76360813 | Msa0573260:intron | 45.0% | |
| CTTTCAGCCTGACAGTATTC+GGG | - | chr4_1:76360795-76360814 | Msa0573260:intron | 45.0% | |
| ! | CCTGACAGTATTCGGGTTAT+GGG | - | chr4_1:76360802-76360821 | Msa0573260:intron | 45.0% |
| GCAAATGTTCCTACTGTTCC+AGG | - | chr4_1:76360859-76360878 | Msa0573260:intron | 45.0% | |
| CAGTCTGATAGCTTCTTCAG+TGG | + | chr4_1:76361018-76361037 | None:intergenic | 45.0% | |
| CACTGAAGAAGCTATCAGAC+TGG | - | chr4_1:76361016-76361035 | Msa0573260:intron | 45.0% | |
| TGGTTTCCCTGTGATGATCA+AGG | - | chr4_1:76361049-76361068 | Msa0573260:intron | 45.0% | |
| GGGATTAATCCTTGAGTCAG+TGG | - | chr4_1:76361479-76361498 | Msa0573260:intron | 45.0% | |
| CATTACATGGCCCATTCAAC+TGG | + | chr4_1:76361590-76361609 | None:intergenic | 45.0% | |
| TTGATTTACTTGGGGCCAAC+AGG | - | chr4_1:76361971-76361990 | Msa0573260:intron | 45.0% | |
| GCTGCTGCATTTGGAAATGA+TGG | - | chr4_1:76362235-76362254 | Msa0573260:intron | 45.0% | |
| CCTGGAATTCAATGTGCCTT+GGG | + | chr4_1:76362288-76362307 | None:intergenic | 45.0% | |
| ACCTGGAATTCAATGTGCCT+TGG | + | chr4_1:76362289-76362308 | None:intergenic | 45.0% | |
| GGCTACAGTCAAACATTACC+TGG | + | chr4_1:76362306-76362325 | None:intergenic | 45.0% | |
| AATGTCCTGTCTGTCTACCT+TGG | - | chr4_1:76362500-76362519 | Msa0573260:intron | 45.0% | |
| GGACAACTAAGAACGAACAG+AGG | + | chr4_1:76362616-76362635 | None:intergenic | 45.0% | |
| AGAACGTGATTGCAGTATCC+AGG | - | chr4_1:76363039-76363058 | Msa0573260:CDS | 45.0% | |
| !! | CTGTTCTGTTTTGTTCCCTG+TGG | - | chr4_1:76363375-76363394 | Msa0573260:intron | 45.0% |
| !! | CGGTTACATAGGTGTTGGAA+CGG | - | chr4_1:76363718-76363737 | Msa0573260:CDS | 45.0% |
| ! | TGGAACGGTTGAGTTCCTTT+TGG | - | chr4_1:76363733-76363752 | Msa0573260:CDS | 45.0% |
| TAGTAGGTATAGGGTAGGTC+GGG | + | chr4_1:76363974-76363993 | None:intergenic | 45.0% | |
| TCTGTGCAAGTATGGGTTTG+GGG | - | chr4_1:76364159-76364178 | Msa0573260:intron | 45.0% | |
| !!! | CTTTTGTTTTTGTGGGTGGG+GGG | - | chr4_1:76364368-76364387 | Msa0573260:intron | 45.0% |
| CAGGAGGATATTGTACTCAG+AGG | - | chr4_1:76364563-76364582 | Msa0573260:intron | 45.0% | |
| CATTCTAACACCAGCTTCCT+CGG | - | chr4_1:76364714-76364733 | Msa0573260:intron | 45.0% | |
| ATTACAGCATACTTGCCGTC+TGG | - | chr4_1:76364955-76364974 | Msa0573260:intron | 45.0% | |
| TGGCTATCCATCCTGACAAA+TGG | + | chr4_1:76364985-76365004 | None:intergenic | 45.0% | |
| AGAAGAGAGTCATAGCTTGG+AGG | + | chr4_1:76365030-76365049 | None:intergenic | 45.0% | |
| CCAAGAAGAGAGTCATAGCT+TGG | + | chr4_1:76365033-76365052 | None:intergenic | 45.0% | |
| CCAAGCTATGACTCTCTTCT+TGG | - | chr4_1:76365030-76365049 | Msa0573260:CDS | 45.0% | |
| CTAAAATCCCGTTACCGATG+TGG | - | chr4_1:76365323-76365342 | Msa0573260:intron | 45.0% | |
| ! | TGAGGTATCCACATCGGTAA+CGG | + | chr4_1:76365334-76365353 | None:intergenic | 45.0% |
| TACCGATGTGGATACCTCAT+TGG | - | chr4_1:76365335-76365354 | Msa0573260:intron | 45.0% | |
| ! | CACCAATGAGGTATCCACAT+CGG | + | chr4_1:76365340-76365359 | None:intergenic | 45.0% |
| GATGTGGATACCTCATTGGT+GGG | - | chr4_1:76365339-76365358 | Msa0573260:intron | 45.0% | |
| GTACGCGAACTCAAGAAATG+AGG | + | chr4_1:76366114-76366133 | None:intergenic | 45.0% | |
| TCCATCAATTTCCTGGCTTC+TGG | + | chr4_1:76366293-76366312 | None:intergenic | 45.0% | |
| ATGCACCTACCTCTATGTCA+AGG | + | chr4_1:76366640-76366659 | None:intergenic | 45.0% | |
| GGCTGAAATTCATGTAGCTG+TGG | - | chr4_1:76367078-76367097 | Msa0573260:CDS | 45.0% | |
| AGAACTTTCTCAAGCACACG+CGG | + | chr4_1:76367370-76367389 | None:intergenic | 45.0% | |
| !! | TCAATTAATTAATTAATTAA+TGG | + | chr4_1:76359585-76359604 | None:intergenic | 5.0% |
| !!! | TTATTTTTTTATTTTTATCA+GGG | - | chr4_1:76361502-76361521 | Msa0573260:intron | 5.0% |
| GTTGCTGAGGTTCCAACAAG+AGG | - | chr4_1:76359136-76359155 | Msa0573260:three_prime_UTR | 50.0% | |
| TGAGGTTCCAACAAGAGGCA+AGG | - | chr4_1:76359141-76359160 | Msa0573260:three_prime_UTR | 50.0% | |
| GGTGAGAGATTTGCATGCTG+CGG | + | chr4_1:76359488-76359507 | None:intergenic | 50.0% | |
| TCTCGCCGCAAATAAACCCT+TGG | + | chr4_1:76359631-76359650 | None:intergenic | 50.0% | |
| AAGGGTTTATTTGCGGCGAG+AGG | - | chr4_1:76359630-76359649 | Msa0573260:intron | 50.0% | |
| AACAGCAATCTCGCCTCGAT+TGG | + | chr4_1:76359823-76359842 | None:intergenic | 50.0% | |
| GTAGCAGCAGCCAGAACATT+TGG | + | chr4_1:76360175-76360194 | None:intergenic | 50.0% | |
| CAACATTGTACATTGGCGGC+TGG | + | chr4_1:76360197-76360216 | None:intergenic | 50.0% | |
| ! | GATGGCTTACTGACTGGAAG+TGG | + | chr4_1:76360493-76360512 | None:intergenic | 50.0% |
| CCGAATACTGTCAGGCTGAA+AGG | + | chr4_1:76360797-76360816 | None:intergenic | 50.0% | |
| ! | GCCTGACAGTATTCGGGTTA+TGG | - | chr4_1:76360801-76360820 | Msa0573260:intron | 50.0% |
| CCCATAACCCGAATACTGTC+AGG | + | chr4_1:76360805-76360824 | None:intergenic | 50.0% | |
| TCCTACTGTTCCAGGAAGTG+AGG | - | chr4_1:76360867-76360886 | Msa0573260:intron | 50.0% | |
| CCTACTGTTCCAGGAAGTGA+GGG | - | chr4_1:76360868-76360887 | Msa0573260:intron | 50.0% | |
| CTACTGTTCCAGGAAGTGAG+GGG | - | chr4_1:76360869-76360888 | Msa0573260:intron | 50.0% | |
| ATCAGACTGGCACACGAGAT+TGG | - | chr4_1:76361029-76361048 | Msa0573260:intron | 50.0% | |
| TGATACCAGTAGGTGCCCAA+AGG | - | chr4_1:76361431-76361450 | Msa0573260:intron | 50.0% | |
| TAAGCCGTGGGGATACCTTT+GGG | + | chr4_1:76361449-76361468 | None:intergenic | 50.0% | |
| ! | CATAATTGGCCTAAGCCGTG+GGG | + | chr4_1:76361460-76361479 | None:intergenic | 50.0% |
| ! | CCATAATTGGCCTAAGCCGT+GGG | + | chr4_1:76361461-76361480 | None:intergenic | 50.0% |
| CCACGGCTTAGGCCAATTAT+GGG | - | chr4_1:76361459-76361478 | Msa0573260:intron | 50.0% | |
| CCCAAGGCACATTGAATTCC+AGG | - | chr4_1:76362285-76362304 | Msa0573260:CDS | 50.0% | |
| CTGGGGATCACATGAATCCT+CGG | - | chr4_1:76362361-76362380 | Msa0573260:intron | 50.0% | |
| TGGGGATCACATGAATCCTC+GGG | - | chr4_1:76362362-76362381 | Msa0573260:intron | 50.0% | |
| AGCTTCCAAGGTAGACAGAC+AGG | + | chr4_1:76362508-76362527 | None:intergenic | 50.0% | |
| CACGCGACCATTAAAGCTCA+CGG | + | chr4_1:76362923-76362942 | None:intergenic | 50.0% | |
| ! | CTGCATTGACCCCAGAGTTA+CGG | - | chr4_1:76363654-76363673 | Msa0573260:intron | 50.0% |
| ATTGACCCCAGAGTTACGGA+AGG | - | chr4_1:76363658-76363677 | Msa0573260:intron | 50.0% | |
| CATTGCCTTCCGTAACTCTG+GGG | + | chr4_1:76363666-76363685 | None:intergenic | 50.0% | |
| CCATTGCCTTCCGTAACTCT+GGG | + | chr4_1:76363667-76363686 | None:intergenic | 50.0% | |
| CCAGAGTTACGGAAGGCAAT+GGG | - | chr4_1:76363665-76363684 | Msa0573260:intron | 50.0% | |
| AATGGGAGATGCAGCAGTTC+AGG | - | chr4_1:76363682-76363701 | Msa0573260:intron | 50.0% | |
| ! | GCCGCATCTATCGGTTACAT+AGG | - | chr4_1:76363707-76363726 | Msa0573260:intron | 50.0% |
| GGAGATGAACACTCGTATCC+AGG | - | chr4_1:76363781-76363800 | Msa0573260:intron | 50.0% | |
| CAGGTAATTGGTATGGGGCT+GGG | - | chr4_1:76364086-76364105 | Msa0573260:intron | 50.0% | |
| !! | TTTTTGTGGGTGGGGGGTAT+TGG | - | chr4_1:76364374-76364393 | Msa0573260:intron | 50.0% |
| TACATCAAGATACCTGGCCC+TGG | + | chr4_1:76364641-76364660 | None:intergenic | 50.0% | |
| AATGTTACAGCCGAGGAAGC+TGG | + | chr4_1:76364727-76364746 | None:intergenic | 50.0% | |
| CTGACAAATGGACCACCAGA+CGG | + | chr4_1:76364973-76364992 | None:intergenic | 50.0% | |
| TGGTGGTCCATTTGTCAGGA+TGG | - | chr4_1:76364975-76364994 | Msa0573260:intron | 50.0% | |
| ! | GAGGTATCCACATCGGTAAC+GGG | + | chr4_1:76365333-76365352 | None:intergenic | 50.0% |
| CGATGTGGATACCTCATTGG+TGG | - | chr4_1:76365338-76365357 | Msa0573260:intron | 50.0% | |
| TTTGTCTATGTGGCTCCGCA+GGG | + | chr4_1:76365417-76365436 | None:intergenic | 50.0% | |
| ! | TTTTGTCTATGTGGCTCCGC+AGG | + | chr4_1:76365418-76365437 | None:intergenic | 50.0% |
| CCTCTTTGTGGTTGGGCTTT+GGG | - | chr4_1:76365488-76365507 | Msa0573260:intron | 50.0% | |
| GTTGCCCTACACAAGTCAAG+TGG | - | chr4_1:76365887-76365906 | Msa0573260:CDS | 50.0% | |
| TCAATTGCATGCCAGAAGCC+AGG | - | chr4_1:76366279-76366298 | Msa0573260:intron | 50.0% | |
| GCCAGAAGCCAGGAAATTGA+TGG | - | chr4_1:76366289-76366308 | Msa0573260:intron | 50.0% | |
| TTTCCACAGCAGCACCAACA+GGG | + | chr4_1:76366893-76366912 | None:intergenic | 50.0% | |
| ATTTCCACAGCAGCACCAAC+AGG | + | chr4_1:76366894-76366913 | None:intergenic | 50.0% | |
| GTTACTGTGACGACGGTGGA+TGG | + | chr4_1:76359514-76359533 | None:intergenic | 55.0% | |
| GTGAGTTACTGTGACGACGG+TGG | + | chr4_1:76359518-76359537 | None:intergenic | 55.0% | |
| GGTTTATTTGCGGCGAGAGG+AGG | - | chr4_1:76359633-76359652 | Msa0573260:intron | 55.0% | |
| TTATTTGCGGCGAGAGGAGG+AGG | - | chr4_1:76359636-76359655 | Msa0573260:intron | 55.0% | |
| CGCGCTTGGCGTTGTTTACA+AGG | + | chr4_1:76359750-76359769 | None:intergenic | 55.0% | |
| GAGTCTGGTCCACTCACGTT+AGG | + | chr4_1:76360298-76360317 | None:intergenic | 55.0% | |
| CCCTCACTTCCTGGAACAGT+AGG | + | chr4_1:76360871-76360890 | None:intergenic | 55.0% | |
| TGCAAAAGCCCCTCACTTCC+TGG | + | chr4_1:76360880-76360899 | None:intergenic | 55.0% | |
| ! | AGGAAGTGAGGGGCTTTTGC+AGG | - | chr4_1:76360879-76360898 | Msa0573260:intron | 55.0% |
| GGATACCTTTGGGCACCTAC+TGG | + | chr4_1:76361439-76361458 | None:intergenic | 55.0% | |
| CTAAGCCGTGGGGATACCTT+TGG | + | chr4_1:76361450-76361469 | None:intergenic | 55.0% | |
| !! | CAAAGGTATCCCCACGGCTT+AGG | - | chr4_1:76361448-76361467 | Msa0573260:intron | 55.0% |
| CCCACGGCTTAGGCCAATTA+TGG | - | chr4_1:76361458-76361477 | Msa0573260:intron | 55.0% | |
| ! | CCCATAATTGGCCTAAGCCG+TGG | + | chr4_1:76361462-76361481 | None:intergenic | 55.0% |
| TGGGGCCAACAGGTAGAAGA+AGG | - | chr4_1:76361981-76362000 | Msa0573260:intron | 55.0% | |
| AGTGAGGCAGCTGCTGCATT+TGG | - | chr4_1:76362226-76362245 | Msa0573260:intron | 55.0% | |
| CGAGGATTCATGTGATCCCC+AGG | + | chr4_1:76362363-76362382 | None:intergenic | 55.0% | |
| GGGGATCACATGAATCCTCG+GGG | - | chr4_1:76362363-76362382 | Msa0573260:intron | 55.0% | |
| GGGATCACATGAATCCTCGG+GGG | - | chr4_1:76362364-76362383 | Msa0573260:intron | 55.0% | |
| ! | TCTGGGGTCAATGCAGGAGA+CGG | + | chr4_1:76363650-76363669 | None:intergenic | 55.0% |
| !! | CGTAACTCTGGGGTCAATGC+AGG | + | chr4_1:76363656-76363675 | None:intergenic | 55.0% |
| CCCAGAGTTACGGAAGGCAA+TGG | - | chr4_1:76363664-76363683 | Msa0573260:intron | 55.0% | |
| CCCATTGCCTTCCGTAACTC+TGG | + | chr4_1:76363668-76363687 | None:intergenic | 55.0% | |
| GTTCAGGCTGCCGCATCTAT+CGG | - | chr4_1:76363698-76363717 | Msa0573260:intron | 55.0% | |
| GCAGGTAATTGGTATGGGGC+TGG | - | chr4_1:76364085-76364104 | Msa0573260:intron | 55.0% | |
| AAGGGATTTAGACCAGGGCC+AGG | - | chr4_1:76364626-76364645 | Msa0573260:intron | 55.0% | |
| ACAGCATACTTGCCGTCTGG+TGG | - | chr4_1:76364958-76364977 | Msa0573260:intron | 55.0% | |
| CGTCTGGTGGTCCATTTGTC+AGG | - | chr4_1:76364971-76364990 | Msa0573260:intron | 55.0% | |
| TTGAGGATTCCCTGACCCTG+CGG | - | chr4_1:76365399-76365418 | Msa0573260:intron | 55.0% | |
| TTGTGCGCACAGCCTCTTTG+TGG | - | chr4_1:76365476-76365495 | Msa0573260:intron | 55.0% | |
| CGCACAGCCTCTTTGTGGTT+GGG | - | chr4_1:76365481-76365500 | Msa0573260:intron | 55.0% | |
| GCCTCTTTGTGGTTGGGCTT+TGG | - | chr4_1:76365487-76365506 | Msa0573260:intron | 55.0% | |
| CCCAAAGCCCAACCACAAAG+AGG | + | chr4_1:76365491-76365510 | None:intergenic | 55.0% | |
| TCCAAAGCACGAGGAGGAGT+TGG | - | chr4_1:76366798-76366817 | Msa0573260:intron | 55.0% | |
| AAGGTGGTGACAGAACCAGC+TGG | - | chr4_1:76367265-76367284 | Msa0573260:CDS | 55.0% | |
| TGTGACGACGGTGGATGGTG+AGG | + | chr4_1:76359509-76359528 | None:intergenic | 60.0% | |
| CAACGCCAAGCGCGTCATTG+CGG | - | chr4_1:76359756-76359775 | Msa0573260:intron | 60.0% | |
| !! | GGTGCCCAAAGGTATCCCCA+CGG | - | chr4_1:76361442-76361461 | Msa0573260:intron | 60.0% |
| GGTGTTTCTCAGGCAACCGC+AGG | - | chr4_1:76361660-76361679 | Msa0573260:intron | 60.0% | |
| GTTTCTCAGGCAACCGCAGG+TGG | - | chr4_1:76361663-76361682 | Msa0573260:intron | 60.0% | |
| !! | GGGGGGTATTGGTCGAGATC+AGG | - | chr4_1:76364385-76364404 | Msa0573260:intron | 60.0% |
| TATGTGGCTCCGCAGGGTCA+GGG | + | chr4_1:76365411-76365430 | None:intergenic | 60.0% | |
| GCGCACAGCCTCTTTGTGGT+TGG | - | chr4_1:76365480-76365499 | Msa0573260:intron | 60.0% | |
| GCCAACTCCTCCTCGTGCTT+TGG | + | chr4_1:76366802-76366821 | None:intergenic | 60.0% | |
| !! | TCTCCCTGTTGGTGCTGCTG+TGG | - | chr4_1:76366887-76366906 | Msa0573260:CDS | 60.0% |
| GCAGCCCCCACAACAGAAGA+TGG | - | chr4_1:76367231-76367250 | Msa0573260:intron | 60.0% | |
| TTTGCGGCGAGAGGAGGAGG+AGG | - | chr4_1:76359639-76359658 | Msa0573260:intron | 65.0% | |
| ! | GAGCACCGCAATGACGCGCT+TGG | + | chr4_1:76359764-76359783 | None:intergenic | 65.0% |
| TCTCAGGCAACCGCAGGTGG+TGG | - | chr4_1:76361666-76361685 | Msa0573260:intron | 65.0% | |
| CTATGTGGCTCCGCAGGGTC+AGG | + | chr4_1:76365412-76365431 | None:intergenic | 65.0% | |
| GCACGAGGAGGAGTTGGCTG+TGG | - | chr4_1:76366804-76366823 | Msa0573260:CDS | 65.0% | |
| CATCAGGCAGTCGAGCCAGC+TGG | + | chr4_1:76367283-76367302 | None:intergenic | 65.0% | |
| !! | CAGCTGGCTCGACTGCCTGA+TGG | - | chr4_1:76367281-76367300 | Msa0573260:CDS | 65.0% |
| GCGAGAGGAGGAGGAGGAGG+AGG | - | chr4_1:76359645-76359664 | Msa0573260:intron | 70.0% | |
| ! | CAGGCAACCGCAGGTGGTGG+AGG | - | chr4_1:76361669-76361688 | Msa0573260:intron | 70.0% |
| !! | ACCGCAGGTGGTGGAGGACG+TGG | - | chr4_1:76361675-76361694 | Msa0573260:intron | 70.0% |
| GCCACGTCCTCCACCACCTG+CGG | + | chr4_1:76361679-76361698 | None:intergenic | 70.0% | |
| GCGGCGAGAGGAGGAGGAGG+AGG | - | chr4_1:76359642-76359661 | Msa0573260:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 76359077 | 76367696 | 76359077 | ID=Msa0573260;Name=Msa0573260 |
| chr4_1 | mRNA | 76359077 | 76367696 | 76359077 | ID=Msa0573260-mRNA-1;Parent=Msa0573260;Name=Msa0573260-mRNA-1;_AED=0.04;_eAED=0.04;_QI=309|0.94|0.88|1|0.82|0.72|18|396|544 |
| chr4_1 | exon | 76359077 | 76359538 | 76359077 | ID=Msa0573260-mRNA-1:exon:26649;Parent=Msa0573260-mRNA-1 |
| chr4_1 | exon | 76359948 | 76360010 | 76359948 | ID=Msa0573260-mRNA-1:exon:26648;Parent=Msa0573260-mRNA-1 |
| chr4_1 | exon | 76360124 | 76360170 | 76360124 | ID=Msa0573260-mRNA-1:exon:26647;Parent=Msa0573260-mRNA-1 |
| chr4_1 | exon | 76360555 | 76360630 | 76360555 | ID=Msa0573260-mRNA-1:exon:26646;Parent=Msa0573260-mRNA-1 |
| chr4_1 | exon | 76361717 | 76361823 | 76361717 | ID=Msa0573260-mRNA-1:exon:26645;Parent=Msa0573260-mRNA-1 |
| chr4_1 | exon | 76362126 | 76362207 | 76362126 | ID=Msa0573260-mRNA-1:exon:26644;Parent=Msa0573260-mRNA-1 |
| chr4_1 | exon | 76362274 | 76362366 | 76362274 | ID=Msa0573260-mRNA-1:exon:26643;Parent=Msa0573260-mRNA-1 |
| chr4_1 | exon | 76362971 | 76363156 | 76362971 | ID=Msa0573260-mRNA-1:exon:26642;Parent=Msa0573260-mRNA-1 |
| chr4_1 | exon | 76363713 | 76363772 | 76363713 | ID=Msa0573260-mRNA-1:exon:26641;Parent=Msa0573260-mRNA-1 |
| chr4_1 | exon | 76364467 | 76364556 | 76364467 | ID=Msa0573260-mRNA-1:exon:26640;Parent=Msa0573260-mRNA-1 |
| chr4_1 | exon | 76365030 | 76365101 | 76365030 | ID=Msa0573260-mRNA-1:exon:26639;Parent=Msa0573260-mRNA-1 |
| chr4_1 | exon | 76365703 | 76365759 | 76365703 | ID=Msa0573260-mRNA-1:exon:26638;Parent=Msa0573260-mRNA-1 |
| chr4_1 | exon | 76365873 | 76365971 | 76365873 | ID=Msa0573260-mRNA-1:exon:26637;Parent=Msa0573260-mRNA-1 |
| chr4_1 | exon | 76366473 | 76366614 | 76366473 | ID=Msa0573260-mRNA-1:exon:26636;Parent=Msa0573260-mRNA-1 |
| chr4_1 | exon | 76366800 | 76367047 | 76366800 | ID=Msa0573260-mRNA-1:exon:26635;Parent=Msa0573260-mRNA-1 |
| chr4_1 | exon | 76367054 | 76367140 | 76367054 | ID=Msa0573260-mRNA-1:exon:26634;Parent=Msa0573260-mRNA-1 |
| chr4_1 | exon | 76367245 | 76367340 | 76367245 | ID=Msa0573260-mRNA-1:exon:26633;Parent=Msa0573260-mRNA-1 |
| chr4_1 | exon | 76367424 | 76367696 | 76367424 | ID=Msa0573260-mRNA-1:exon:26632;Parent=Msa0573260-mRNA-1 |
| chr4_1 | five_prime_UTR | 76367424 | 76367696 | 76367424 | ID=Msa0573260-mRNA-1:five_prime_utr;Parent=Msa0573260-mRNA-1 |
| chr4_1 | five_prime_UTR | 76367305 | 76367340 | 76367305 | ID=Msa0573260-mRNA-1:five_prime_utr;Parent=Msa0573260-mRNA-1 |
| chr4_1 | CDS | 76367245 | 76367304 | 76367245 | ID=Msa0573260-mRNA-1:cds;Parent=Msa0573260-mRNA-1 |
| chr4_1 | CDS | 76367054 | 76367140 | 76367054 | ID=Msa0573260-mRNA-1:cds;Parent=Msa0573260-mRNA-1 |
| chr4_1 | CDS | 76366800 | 76367047 | 76366800 | ID=Msa0573260-mRNA-1:cds;Parent=Msa0573260-mRNA-1 |
| chr4_1 | CDS | 76366473 | 76366614 | 76366473 | ID=Msa0573260-mRNA-1:cds;Parent=Msa0573260-mRNA-1 |
| chr4_1 | CDS | 76365873 | 76365971 | 76365873 | ID=Msa0573260-mRNA-1:cds;Parent=Msa0573260-mRNA-1 |
| chr4_1 | CDS | 76365703 | 76365759 | 76365703 | ID=Msa0573260-mRNA-1:cds;Parent=Msa0573260-mRNA-1 |
| chr4_1 | CDS | 76365030 | 76365101 | 76365030 | ID=Msa0573260-mRNA-1:cds;Parent=Msa0573260-mRNA-1 |
| chr4_1 | CDS | 76364467 | 76364556 | 76364467 | ID=Msa0573260-mRNA-1:cds;Parent=Msa0573260-mRNA-1 |
| chr4_1 | CDS | 76363713 | 76363772 | 76363713 | ID=Msa0573260-mRNA-1:cds;Parent=Msa0573260-mRNA-1 |
| chr4_1 | CDS | 76362971 | 76363156 | 76362971 | ID=Msa0573260-mRNA-1:cds;Parent=Msa0573260-mRNA-1 |
| chr4_1 | CDS | 76362274 | 76362366 | 76362274 | ID=Msa0573260-mRNA-1:cds;Parent=Msa0573260-mRNA-1 |
| chr4_1 | CDS | 76362126 | 76362207 | 76362126 | ID=Msa0573260-mRNA-1:cds;Parent=Msa0573260-mRNA-1 |
| chr4_1 | CDS | 76361717 | 76361823 | 76361717 | ID=Msa0573260-mRNA-1:cds;Parent=Msa0573260-mRNA-1 |
| chr4_1 | CDS | 76360555 | 76360630 | 76360555 | ID=Msa0573260-mRNA-1:cds;Parent=Msa0573260-mRNA-1 |
| chr4_1 | CDS | 76360124 | 76360170 | 76360124 | ID=Msa0573260-mRNA-1:cds;Parent=Msa0573260-mRNA-1 |
| chr4_1 | CDS | 76359948 | 76360010 | 76359948 | ID=Msa0573260-mRNA-1:cds;Parent=Msa0573260-mRNA-1 |
| chr4_1 | CDS | 76359473 | 76359538 | 76359473 | ID=Msa0573260-mRNA-1:cds;Parent=Msa0573260-mRNA-1 |
| chr4_1 | three_prime_UTR | 76359077 | 76359472 | 76359077 | ID=Msa0573260-mRNA-1:three_prime_utr;Parent=Msa0573260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
