Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615640 | AES90689.1 | 98.726 | 471 | 5 | 1 | 1 | 471 | 1 | 470 | 0.0 | 955 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615640 | sp|P52410|KASC1_ARATH | 80.882 | 476 | 83 | 3 | 1 | 471 | 1 | 473 | 0.0 | 786 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615640 | G7JDY8 | 98.726 | 471 | 5 | 1 | 1 | 471 | 1 | 470 | 0.0 | 955 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0615640 | Msa0687460 | 0.812388 | 4.348553e-51 | -8.615850e-47 |
| Msa0615640 | Msa1191820 | 0.826307 | 2.914795e-54 | -8.615850e-47 |
| Msa0374240 | Msa0615640 | 0.871996 | 4.461969e-67 | -8.615850e-47 |
| Msa0427930 | Msa0615640 | 0.813584 | 2.377177e-51 | -8.615850e-47 |
| Msa0469800 | Msa0615640 | 0.848361 | 6.435641e-60 | -8.615850e-47 |
| Msa0469810 | Msa0615640 | 0.856722 | 2.655253e-62 | -8.615850e-47 |
| Msa0515360 | Msa0615640 | 0.864071 | 1.583176e-64 | -8.615850e-47 |
| Msa0518590 | Msa0615640 | 0.826640 | 2.427673e-54 | -8.615850e-47 |
| Msa0552710 | Msa0615640 | 0.845771 | 3.299447e-59 | -8.615850e-47 |
| Msa0573260 | Msa0615640 | 0.815443 | 9.221100e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615640 | MtrunA17_Chr1g0204841 | 90.295 | 474 | 41 | 4 | 1 | 471 | 1 | 472 | 0.0 | 867 |
| Msa0615640 | MtrunA17_Chr4g0052121 | 89.770 | 479 | 28 | 5 | 1 | 471 | 1 | 466 | 0.0 | 850 |
| Msa0615640 | MtrunA17_Chr8g0388511 | 74.211 | 380 | 98 | 0 | 47 | 426 | 5 | 384 | 0.0 | 603 |
| Msa0615640 | MtrunA17_Chr2g0301361 | 59.398 | 399 | 160 | 2 | 73 | 470 | 91 | 488 | 8.01e-174 | 497 |
| Msa0615640 | MtrunA17_Chr4g0070171 | 59.250 | 400 | 159 | 4 | 73 | 470 | 94 | 491 | 1.99e-170 | 488 |
| Msa0615640 | MtrunA17_Chr8g0388531 | 74.093 | 193 | 50 | 0 | 47 | 239 | 33 | 225 | 4.79e-101 | 301 |
| Msa0615640 | MtrunA17_Chr8g0388551 | 55.918 | 245 | 56 | 2 | 47 | 291 | 25 | 217 | 5.04e-89 | 274 |
| Msa0615640 | MtrunA17_Chr1g0183091 | 39.631 | 434 | 235 | 7 | 59 | 467 | 37 | 468 | 1.49e-87 | 276 |
| Msa0615640 | MtrunA17_Chr8g0388561 | 72.254 | 173 | 45 | 1 | 299 | 471 | 1 | 170 | 1.54e-86 | 262 |
| Msa0615640 | MtrunA17_Chr8g0388541 | 78.873 | 71 | 15 | 0 | 356 | 426 | 55 | 125 | 1.27e-32 | 120 |
| Msa0615640 | MtrunA17_Chr8g0388541 | 61.111 | 72 | 28 | 0 | 244 | 315 | 1 | 72 | 1.06e-23 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615640 | AT5G46290.1 | 80.882 | 476 | 83 | 3 | 1 | 471 | 1 | 473 | 0.0 | 786 |
| Msa0615640 | AT5G46290.3 | 78.252 | 492 | 83 | 4 | 1 | 471 | 1 | 489 | 0.0 | 776 |
| Msa0615640 | AT5G46290.2 | 69.748 | 476 | 81 | 5 | 1 | 471 | 1 | 418 | 0.0 | 647 |
| Msa0615640 | AT1G74960.1 | 54.965 | 433 | 193 | 2 | 39 | 470 | 110 | 541 | 1.22e-167 | 483 |
| Msa0615640 | AT1G74960.3 | 54.965 | 433 | 193 | 2 | 39 | 470 | 110 | 541 | 1.22e-167 | 483 |
| Msa0615640 | AT1G74960.2 | 54.965 | 433 | 193 | 2 | 39 | 470 | 110 | 541 | 1.22e-167 | 483 |
| Msa0615640 | AT2G04540.1 | 40.230 | 435 | 230 | 12 | 59 | 468 | 31 | 460 | 7.78e-82 | 261 |
Find 160 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATTGCCGCTCAATTTA+TGG | 0.081283 | 4_2:-65101846 | None:intergenic |
| TAATAACAAGCATGTATTTA+TGG | 0.129843 | 4_2:-65097390 | Msa0615640:three_prime_UTR |
| TCCTTATGCTATTACAAATA+TGG | 0.182977 | 4_2:-65100976 | Msa0615640:CDS |
| TTGGGATTGATTTAGGTTTC+AGG | 0.183362 | 4_2:-65100941 | Msa0615640:CDS |
| GCCATTATTCCTATTGGTTT+GGG | 0.188973 | 4_2:-65100801 | Msa0615640:CDS |
| GGGCACTGCCTTGGCGCAGC+TGG | 0.190007 | 4_2:-65098790 | Msa0615640:CDS |
| GCTTTACTTGGGATTGATTT+AGG | 0.219677 | 4_2:-65100948 | Msa0615640:CDS |
| GCAGTTGAAATAGAATAATT+TGG | 0.222982 | 4_2:+65100915 | None:intergenic |
| CCAGGCATTTCAAATTCTTT+TGG | 0.230083 | 4_2:-65097877 | Msa0615640:intron |
| GGAGAGTCTCTTTGGGGTTT+TGG | 0.230728 | 4_2:+65101551 | None:intergenic |
| GATGAAACTTTGGTATTTAA+TGG | 0.231536 | 4_2:+65101753 | None:intergenic |
| TTCTACAGCAAAACAGTCTT+TGG | 0.251483 | 4_2:+65097527 | None:intergenic |
| AATGCTTAAATAAGCTCTTT+TGG | 0.260712 | 4_2:+65097444 | None:intergenic |
| TGCCATTATTCCTATTGGTT+TGG | 0.267531 | 4_2:-65100802 | Msa0615640:CDS |
| GAGACGACGGAGAGTCTCTT+TGG | 0.301000 | 4_2:+65101543 | None:intergenic |
| TGCGAACCGAGTAGGGAATT+TGG | 0.306727 | 4_2:+65101353 | None:intergenic |
| ATGACCCTAAAACTGCTTCT+AGG | 0.311296 | 4_2:-65100740 | Msa0615640:CDS |
| TCAAAATCAACTGCAGGTTC+TGG | 0.321272 | 4_2:+65098039 | None:intergenic |
| AGAGATTAATGCTATCAAAA+AGG | 0.331270 | 4_2:-65098985 | Msa0615640:CDS |
| TTGGGATCCTTCTCTCTTTG+AGG | 0.337127 | 4_2:+65101498 | None:intergenic |
| GTGGGATCACATTGATTGAT+AGG | 0.337601 | 4_2:-65101386 | Msa0615640:CDS |
| AGCAGATAAACTTGGCAATC+AGG | 0.342572 | 4_2:+65097810 | None:intergenic |
| AGTGATCACAACACGCTTCT+TGG | 0.350950 | 4_2:+65101479 | None:intergenic |
| CTGTGATACCAGTCTATGAT+AGG | 0.352309 | 4_2:-65098811 | Msa0615640:intron |
| AGCATAAAATGAACAATTAC+AGG | 0.353040 | 4_2:+65097572 | None:intergenic |
| AATATGGCTTCAGCTTTACT+TGG | 0.353169 | 4_2:-65100960 | Msa0615640:CDS |
| TATTGTTATTGAATCTTTGT+TGG | 0.361058 | 4_2:-65097363 | Msa0615640:three_prime_UTR |
| GAAGCTGCCATTATTCCTAT+TGG | 0.362133 | 4_2:-65100807 | Msa0615640:CDS |
| TGGGATTGATTTAGGTTTCA+GGG | 0.362251 | 4_2:-65100940 | Msa0615640:CDS |
| ATCTTCAAGTGCTTTCTTCC+CGG | 0.364383 | 4_2:+65101242 | None:intergenic |
| TTTGGCGGTGGTGGTGGCGG+CGG | 0.369732 | 4_2:+65101569 | None:intergenic |
| GGGTGAAGGTGCTGGAGTTT+TGG | 0.370027 | 4_2:-65100685 | Msa0615640:intron |
| TTTGTTATGGGTGAAGGTGC+TGG | 0.375390 | 4_2:-65100693 | Msa0615640:CDS |
| ACCTATCATTGCTGAATACT+TGG | 0.377637 | 4_2:-65100293 | Msa0615640:CDS |
| CCCCAAACCAATAGGAATAA+TGG | 0.379340 | 4_2:+65100800 | None:intergenic |
| AGACGACGGAGAGTCTCTTT+GGG | 0.379518 | 4_2:+65101544 | None:intergenic |
| CTCGCTTCATGGCATGTTCA+AGG | 0.383805 | 4_2:+65100320 | None:intergenic |
| GGCACTGCCTTGGCGCAGCT+GGG | 0.383994 | 4_2:-65098789 | Msa0615640:CDS |
| GGTGGTGGTGGCGGCGGCAT+TGG | 0.384156 | 4_2:+65101575 | None:intergenic |
| CGTACGAATTGATTGATTGA+TGG | 0.387158 | 4_2:+65098715 | None:intergenic |
| TTCCACTCTTGTTGGTGACT+TGG | 0.387671 | 4_2:-65099009 | Msa0615640:CDS |
| TACATTTAGCTTGTTAAGAA+TGG | 0.388600 | 4_2:-65097300 | Msa0615640:three_prime_UTR |
| GATAGGTGCACCTCGCTTCA+TGG | 0.393092 | 4_2:+65100309 | None:intergenic |
| ATGCAGCCACCCTGTTGTTA+TGG | 0.398709 | 4_2:+65098738 | None:intergenic |
| GATAATTTGTGATGAAACTT+TGG | 0.401563 | 4_2:+65101743 | None:intergenic |
| TAAAGAACGTGCTGGTGTTT+TGG | 0.402018 | 4_2:-65101090 | Msa0615640:CDS |
| TTTCTTGCATTGGAAATTCC+GGG | 0.404906 | 4_2:+65101821 | None:intergenic |
| ACAATAAAAGCCATAACAAC+AGG | 0.409441 | 4_2:-65098748 | Msa0615640:CDS |
| AGCACGGAGATTTCATTGTT+TGG | 0.410392 | 4_2:-65097492 | Msa0615640:three_prime_UTR |
| GTCAGGAATGGGTGGTTTAA+CGG | 0.413571 | 4_2:-65101063 | Msa0615640:CDS |
| CTAAAACTGCTTCTAGGCCT+TGG | 0.415317 | 4_2:-65100734 | Msa0615640:CDS |
| GTGATCACAACACGCTTCTT+GGG | 0.422999 | 4_2:+65101480 | None:intergenic |
| CACTGCCTTGGCGCAGCTGG+GGG | 0.431565 | 4_2:-65098787 | Msa0615640:CDS |
| CGGAGTGGTTCGAGTGGTGA+AGG | 0.433580 | 4_2:+65101609 | None:intergenic |
| CTCTCTTTGAGGAGCGGCTG+TGG | 0.435852 | 4_2:+65101509 | None:intergenic |
| GGTGGTGGCGGCGGCATTGG+AGG | 0.443199 | 4_2:+65101578 | None:intergenic |
| GCCATATTTGTAATAGCATA+AGG | 0.446803 | 4_2:+65100975 | None:intergenic |
| GTTAAGAATCTGATTGAAAA+GGG | 0.449404 | 4_2:-65101026 | Msa0615640:CDS |
| CATGCAACTTCCACTCTTGT+TGG | 0.451361 | 4_2:-65099017 | Msa0615640:CDS |
| GCACTGCCTTGGCGCAGCTG+GGG | 0.451754 | 4_2:-65098788 | Msa0615640:CDS |
| ACGCCAAGCCCATCAGATCT+TGG | 0.452089 | 4_2:+65100232 | None:intergenic |
| AGTTAAGAATCTGATTGAAA+AGG | 0.455234 | 4_2:-65101027 | Msa0615640:CDS |
| CTCCGGTACTGCAATGTCGC+CGG | 0.463407 | 4_2:-65101261 | Msa0615640:CDS |
| GCCGCTCAATTTATGGATCC+CGG | 0.464501 | 4_2:-65101839 | None:intergenic |
| TCCCGGCGACATTGCAGTAC+CGG | 0.468002 | 4_2:+65101259 | None:intergenic |
| TAAAACTGCTTCTAGGCCTT+GGG | 0.469150 | 4_2:-65100733 | Msa0615640:CDS |
| CCCACCCGCAATCATCAAAT+CGG | 0.469221 | 4_2:+65100833 | None:intergenic |
| GGTGAAGGGCGGAGAGTGAA+GGG | 0.471647 | 4_2:+65101624 | None:intergenic |
| TTGGTTGGGTCAGGAATGGG+TGG | 0.473581 | 4_2:-65101071 | Msa0615640:CDS |
| CCATTATTCCTATTGGTTTG+GGG | 0.476862 | 4_2:-65100800 | Msa0615640:CDS |
| CTGCTGCCAATCACATTCGT+AGG | 0.477416 | 4_2:-65100863 | Msa0615640:CDS |
| ATGACTGATCCAAGATCTGA+TGG | 0.479018 | 4_2:-65100241 | Msa0615640:CDS |
| CATTATTCCTATTGGTTTGG+GGG | 0.482868 | 4_2:-65100799 | Msa0615640:CDS |
| GAGGCCGATTTGATGATTGC+GGG | 0.483517 | 4_2:-65100837 | Msa0615640:CDS |
| CCCAAGTATTCAGCAATGAT+AGG | 0.484502 | 4_2:+65100292 | None:intergenic |
| AAATTCCCTACTCGGTTCGC+AGG | 0.490002 | 4_2:-65101351 | Msa0615640:CDS |
| CTCACCCCTACGAATGTGAT+TGG | 0.491901 | 4_2:+65100857 | None:intergenic |
| GATCCAAGATCTGATGGGCT+TGG | 0.498358 | 4_2:-65100235 | Msa0615640:CDS |
| CTTTACTTAACAATAAGATA+AGG | 0.499417 | 4_2:+65097418 | None:intergenic |
| TGCTGCCAATCACATTCGTA+GGG | 0.501866 | 4_2:-65100862 | Msa0615640:CDS |
| TCTGACCTGCGAACCGAGTA+GGG | 0.504912 | 4_2:+65101346 | None:intergenic |
| GCACTTGAAGATGCTGGTCT+CGG | 0.506363 | 4_2:-65101231 | Msa0615640:CDS |
| TCCGGTACTGCAATGTCGCC+GGG | 0.507162 | 4_2:-65101260 | Msa0615640:CDS |
| GAGTAAGACAATACCTCCTC+GGG | 0.513068 | 4_2:+65100166 | None:intergenic |
| AAGAAGCGTGTTGTGATCAC+TGG | 0.513825 | 4_2:-65101477 | Msa0615640:CDS |
| ATGCTTCCAAATTCCCTACT+CGG | 0.516081 | 4_2:-65101359 | Msa0615640:CDS |
| CAGCAGCATGAAATTAATGT+TGG | 0.518157 | 4_2:-65097997 | Msa0615640:intron |
| AGCTTCTCGCCGGTGAGAGT+GGG | 0.518796 | 4_2:-65101404 | Msa0615640:CDS |
| TTGAGGAGCGGCTGTGGTGA+CGG | 0.521594 | 4_2:+65101515 | None:intergenic |
| TGAGGCCGATTTGATGATTG+CGG | 0.522914 | 4_2:-65100838 | Msa0615640:CDS |
| AAGAAAGCACTTGAAGATGC+TGG | 0.527588 | 4_2:-65101237 | Msa0615640:CDS |
| AGCTCTGAGGGTTACATCGA+CGG | 0.529142 | 4_2:-65101312 | Msa0615640:CDS |
| CGGCGTCTACAAGACTGCTC+TGG | 0.531158 | 4_2:+65100197 | None:intergenic |
| CGGGAAGAATGACCGGAGAC+AGG | 0.533743 | 4_2:-65101292 | Msa0615640:CDS |
| ATCCGTGGGTTTAGCTCTGA+GGG | 0.533824 | 4_2:-65101324 | Msa0615640:CDS |
| AAGCTTCTCGCCGGTGAGAG+TGG | 0.533893 | 4_2:-65101405 | Msa0615640:CDS |
| ATATGGCTTCAGCTTTACTT+GGG | 0.536843 | 4_2:-65100959 | Msa0615640:CDS |
| ATTATTCCTATTGGTTTGGG+GGG | 0.537089 | 4_2:-65100798 | Msa0615640:CDS |
| CAATGTGATCCCACTCTCAC+CGG | 0.537398 | 4_2:+65101395 | None:intergenic |
| GCTCTGAGGGTTACATCGAC+GGG | 0.540385 | 4_2:-65101311 | Msa0615640:CDS |
| GACGACGGAGAGTCTCTTTG+GGG | 0.543879 | 4_2:+65101545 | None:intergenic |
| GCAGATAAACTTGGCAATCA+GGG | 0.545207 | 4_2:+65097811 | None:intergenic |
| GATCCGTGGGTTTAGCTCTG+AGG | 0.548499 | 4_2:-65101325 | Msa0615640:CDS |
| GGTTCGCAGGTCAGATCCGT+GGG | 0.552078 | 4_2:-65101338 | Msa0615640:CDS |
| ACATGAAGAGCAGATAAACT+TGG | 0.553144 | 4_2:+65097802 | None:intergenic |
| TTGTTCTCTCTACATCATTG+AGG | 0.554649 | 4_2:-65097631 | Msa0615640:three_prime_UTR |
| CGGTGCCGAAAATCTCGATA+AGG | 0.557505 | 4_2:-65101211 | Msa0615640:intron |
| CGGTTCGCAGGTCAGATCCG+TGG | 0.558021 | 4_2:-65101339 | Msa0615640:CDS |
| AGAGTAAGACAATACCTCCT+CGG | 0.558328 | 4_2:+65100165 | None:intergenic |
| GGGATTGATTTAGGTTTCAG+GGG | 0.561124 | 4_2:-65100939 | Msa0615640:CDS |
| ATGGGTGGCGTCACTGTACA+TGG | 0.561821 | 4_2:-65101453 | Msa0615640:CDS |
| TGGTGAAGGGCGGAGAGTGA+AGG | 0.562830 | 4_2:+65101623 | None:intergenic |
| GGAGACAATCATCCTGTCTC+CGG | 0.564955 | 4_2:+65101280 | None:intergenic |
| GCCGATTTGATGATTGCGGG+TGG | 0.565161 | 4_2:-65100834 | Msa0615640:CDS |
| CAATCACATTCGTAGGGGTG+AGG | 0.569075 | 4_2:-65100856 | Msa0615640:CDS |
| AATCAGATTCTTAACTCCGT+CGG | 0.570042 | 4_2:+65101034 | None:intergenic |
| CCTATCATTGCTGAATACTT+GGG | 0.577362 | 4_2:-65100292 | Msa0615640:CDS |
| ACGGTATCAAAATCAACTGC+AGG | 0.580461 | 4_2:+65098033 | None:intergenic |
| ACATCGACGGGAAGAATGAC+CGG | 0.581180 | 4_2:-65101299 | Msa0615640:CDS |
| CGTGTTGTGATCACTGGCAT+GGG | 0.584729 | 4_2:-65101471 | Msa0615640:CDS |
| TTGTTTGGTAGTTAGACTTG+CGG | 0.585993 | 4_2:-65097477 | Msa0615640:three_prime_UTR |
| TGCCAAGTCACCAACAAGAG+TGG | 0.586198 | 4_2:+65099007 | None:intergenic |
| TTCTACGAGAAGCTTCTCGC+CGG | 0.588660 | 4_2:-65101414 | Msa0615640:CDS |
| TACCTCCTCGGGTGACACAC+CGG | 0.588795 | 4_2:+65100177 | None:intergenic |
| TGGTGGACACAACTCTGTCG+TGG | 0.588850 | 4_2:-65097851 | Msa0615640:CDS |
| CTGCTGCTTGACATTTGCCA+CGG | 0.591270 | 4_2:+65098014 | None:intergenic |
| TCTATGATAGGGCACTGCCT+TGG | 0.593139 | 4_2:-65098799 | Msa0615640:CDS |
| GTTGTGATCACTGGCATGGG+TGG | 0.596678 | 4_2:-65101468 | Msa0615640:CDS |
| ATGACATGATAATACCTTGG+TGG | 0.597289 | 4_2:+65098929 | None:intergenic |
| GCGTGTTGTGATCACTGGCA+TGG | 0.599227 | 4_2:-65101472 | Msa0615640:CDS |
| ATCCTTCTCTCTTTGAGGAG+CGG | 0.601863 | 4_2:+65101503 | None:intergenic |
| CCGATTTGATGATTGCGGGT+GGG | 0.602467 | 4_2:-65100833 | Msa0615640:CDS |
| TGTGATACCAGTCTATGATA+GGG | 0.603213 | 4_2:-65098810 | Msa0615640:intron |
| GGAGTGGTTCGAGTGGTGAA+GGG | 0.605118 | 4_2:+65101610 | None:intergenic |
| AGCCGCTCCTCAAAGAGAGA+AGG | 0.608919 | 4_2:-65101505 | Msa0615640:CDS |
| ATCTGACCTGCGAACCGAGT+AGG | 0.609425 | 4_2:+65101345 | None:intergenic |
| GGAGACAGGATGATTGTCTC+CGG | 0.614203 | 4_2:-65101278 | Msa0615640:CDS |
| ACTGAGAGAATGAAGCTGAA+TGG | 0.617239 | 4_2:+65101687 | None:intergenic |
| CATCAAAATTAATGCCACCA+AGG | 0.623828 | 4_2:-65098943 | Msa0615640:intron |
| CCATCACGGTCTTTATCCCA+AGG | 0.625058 | 4_2:+65100717 | None:intergenic |
| TCCGGGATCCATAAATTGAG+CGG | 0.626276 | 4_2:+65101838 | None:intergenic |
| CCTTGGGATAAAGACCGTGA+TGG | 0.627148 | 4_2:-65100717 | Msa0615640:CDS |
| CTTGAACATGCCATGAAGCG+AGG | 0.627955 | 4_2:-65100319 | Msa0615640:CDS |
| CGCCGGTGTGTCACCCGAGG+AGG | 0.641700 | 4_2:-65100179 | Msa0615640:intron |
| AGGAGCGGCTGTGGTGACGG+CGG | 0.642442 | 4_2:+65101518 | None:intergenic |
| TGGCAATCAGGGTCTGAAAG+CGG | 0.643041 | 4_2:+65097822 | None:intergenic |
| TAGATTGATAAAGAACGTGC+TGG | 0.644130 | 4_2:-65101098 | Msa0615640:CDS |
| TGACTGATCCAAGATCTGAT+GGG | 0.646479 | 4_2:-65100240 | Msa0615640:CDS |
| AGACGCCGGTGTGTCACCCG+AGG | 0.647368 | 4_2:-65100182 | Msa0615640:CDS |
| ATCATTGCTGAATACTTGGG+AGG | 0.652856 | 4_2:-65100289 | Msa0615640:CDS |
| CAGAGCAGTCTTGTAGACGC+CGG | 0.652992 | 4_2:-65100196 | Msa0615640:CDS |
| GTGGTTCGAGTGGTGAAGGG+CGG | 0.658669 | 4_2:+65101613 | None:intergenic |
| TGAAGCTGAATGGTGTGATG+AGG | 0.664768 | 4_2:+65101697 | None:intergenic |
| CACCCATAACAAAACCATCA+CGG | 0.674295 | 4_2:+65100703 | None:intergenic |
| CAATAAAAGCCATAACAACA+GGG | 0.677458 | 4_2:-65098747 | Msa0615640:CDS |
| GGTGACGGCGGAAGAGACGA+CGG | 0.681754 | 4_2:+65101530 | None:intergenic |
| AACCCTCAGAGCTAAACCCA+CGG | 0.685542 | 4_2:+65101322 | None:intergenic |
| AAGGCTCTTCATGTAGAACA+CGG | 0.713024 | 4_2:-65097670 | Msa0615640:intron |
| GCTGCCAATCACATTCGTAG+GGG | 0.729757 | 4_2:-65100861 | Msa0615640:CDS |
| TAAAAGCCATAACAACAGGG+TGG | 0.762513 | 4_2:-65098744 | Msa0615640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACTTTTATATTGTTAATTA+AGG | + | chr4_2:65098517-65098536 | None:intergenic | 10.0% |
| !! | AATATTCAATTACATAAATT+AGG | - | chr4_2:65099295-65099314 | Msa0615640:intron | 10.0% |
| !!! | AATATATTTAAAACATCAAT+CGG | - | chr4_2:65099651-65099670 | Msa0615640:intron | 10.0% |
| !! | TTTAATAAAAGTTAAATAAC+AGG | + | chr4_2:65100664-65100683 | None:intergenic | 10.0% |
| !!! | TTTATTTATTTTGACAACAA+GGG | + | chr4_2:65097345-65097364 | None:intergenic | 15.0% |
| !!! | GATTTAGAATTATTCTTTTT+TGG | + | chr4_2:65098652-65098671 | None:intergenic | 15.0% |
| !!! | TCCTGTTTTTTTTTTTTTTT+TGG | - | chr4_2:65098712-65098731 | Msa0615640:intron | 15.0% |
| !!! | CCTGTTTTTTTTTTTTTTTT+GGG | - | chr4_2:65098713-65098732 | Msa0615640:intron | 15.0% |
| !! | TTAAATATATTCTAATCACA+AGG | + | chr4_2:65099642-65099661 | None:intergenic | 15.0% |
| !! | AAAATATTAATCAGACATTA+AGG | + | chr4_2:65099842-65099861 | None:intergenic | 15.0% |
| !!! | AATTTGCTTATAAAAAGAAA+CGG | + | chr4_2:65099994-65100013 | None:intergenic | 15.0% |
| !!! | AATTTGCTTATAAAAAGAAA+TGG | - | chr4_2:65099994-65100013 | Msa0615640:intron | 15.0% |
| !! | ATAAATAAGGTTATATTGAA+CGG | + | chr4_2:65100630-65100649 | None:intergenic | 15.0% |
| !!! | TTCAATATAACCTTATTTAT+TGG | - | chr4_2:65100630-65100649 | Msa0615640:intron | 15.0% |
| !! | ATTAATTATAATTCTTACGA+AGG | + | chr4_2:65100730-65100749 | None:intergenic | 15.0% |
| !!! | ACTACAACTTTTAAATATTA+TGG | + | chr4_2:65101526-65101545 | None:intergenic | 15.0% |
| !!! | GTTTATTTATTTTGACAACA+AGG | + | chr4_2:65097346-65097365 | None:intergenic | 20.0% |
| !! | AAAAAATCCAAATCCAATTA+GGG | + | chr4_2:65097990-65098009 | None:intergenic | 20.0% |
| !! | AAAAAAATCCAAATCCAATT+AGG | + | chr4_2:65097991-65098010 | None:intergenic | 20.0% |
| !! | ATAGCATAAGGAATAAAAAA+AGG | + | chr4_2:65098134-65098153 | None:intergenic | 20.0% |
| !! | AGAACAATAACAAATCATTA+AGG | + | chr4_2:65098479-65098498 | None:intergenic | 20.0% |
| !!! | ATGATTTGTTATTGTTCTTT+TGG | - | chr4_2:65098481-65098500 | Msa0615640:intron | 20.0% |
| !! | CCCAAAAAAAAAAAAAAAAC+AGG | + | chr4_2:65098716-65098735 | None:intergenic | 20.0% |
| !! | AGAAAAGCAATGAATTAAAT+GGG | + | chr4_2:65099035-65099054 | None:intergenic | 20.0% |
| !! | TTAGTAAAATCAAAAACAGT+TGG | + | chr4_2:65099522-65099541 | None:intergenic | 20.0% |
| !!! | AATTCTTGTTTTTCATGATT+AGG | - | chr4_2:65100433-65100452 | Msa0615640:intron | 20.0% |
| !! | TAAAAGTTAAATAACAGGTT+GGG | + | chr4_2:65100659-65100678 | None:intergenic | 20.0% |
| !! | ATAAAAGTTAAATAACAGGT+TGG | + | chr4_2:65100660-65100679 | None:intergenic | 20.0% |
| !! | TATATGAACTATCATGTTAT+TGG | - | chr4_2:65100874-65100893 | Msa0615640:CDS | 20.0% |
| !!! | ATTTCAAATTCTTTTGGATT+TGG | - | chr4_2:65101247-65101266 | Msa0615640:CDS | 20.0% |
| !! | CTTTACTTAACAATAAGATA+AGG | + | chr4_2:65101703-65101722 | None:intergenic | 20.0% |
| !! | TAATAACAAGCATGTATTTA+TGG | - | chr4_2:65101728-65101747 | Msa0615640:five_prime_UTR | 20.0% |
| !!! | TATTGTTATTGAATCTTTGT+TGG | - | chr4_2:65101755-65101774 | Msa0615640:five_prime_UTR | 20.0% |
| !! | ATAACAATGTTTTCTTGCAT+TGG | + | chr4_2:65097310-65097329 | None:intergenic | 25.0% |
| ! | GATGAAACTTTGGTATTTAA+TGG | + | chr4_2:65097368-65097387 | None:intergenic | 25.0% |
| !! | GATAATTTGTGATGAAACTT+TGG | + | chr4_2:65097378-65097397 | None:intergenic | 25.0% |
| !! | TTAAACCTTATCGAGATTTT+CGG | + | chr4_2:65097915-65097934 | None:intergenic | 25.0% |
| ! | TATATCTGAATTGAACTGAA+CGG | - | chr4_2:65097962-65097981 | Msa0615640:intron | 25.0% |
| ! | AGTTAAGAATCTGATTGAAA+AGG | - | chr4_2:65098091-65098110 | Msa0615640:intron | 25.0% |
| ! | GTTAAGAATCTGATTGAAAA+GGG | - | chr4_2:65098092-65098111 | Msa0615640:intron | 25.0% |
| ! | TCCTTATGCTATTACAAATA+TGG | - | chr4_2:65098142-65098161 | Msa0615640:intron | 25.0% |
| ! | GCAGTTGAAATAGAATAATT+TGG | + | chr4_2:65098206-65098225 | None:intergenic | 25.0% |
| !!! | ATACAGAAATTAACTTGTAG+AGG | + | chr4_2:65098740-65098759 | None:intergenic | 25.0% |
| !! | TACTATAACTTTAAAGGTGA+TGG | - | chr4_2:65098771-65098790 | Msa0615640:CDS | 25.0% |
| ! | GAGAAAAGCAATGAATTAAA+TGG | + | chr4_2:65099036-65099055 | None:intergenic | 25.0% |
| !! | AAATTTATAGCATTGAGTTC+TGG | - | chr4_2:65099240-65099259 | Msa0615640:intron | 25.0% |
| ! | ATTTAGTGGTATGATAAAAC+TGG | - | chr4_2:65099403-65099422 | Msa0615640:intron | 25.0% |
| ! | AGAAAACGTAAAAGAAGAAA+AGG | - | chr4_2:65099426-65099445 | Msa0615640:intron | 25.0% |
| ! | TATAAACTGATTATTTGCAG+AGG | + | chr4_2:65099701-65099720 | None:intergenic | 25.0% |
| ! | CATTCAATTAATGATGTATG+TGG | - | chr4_2:65099921-65099940 | Msa0615640:intron | 25.0% |
| ! | ATGTATGTGGTTCATAATAT+GGG | + | chr4_2:65099947-65099966 | None:intergenic | 25.0% |
| ! | CATTCAATTAATGATGTATG+TGG | + | chr4_2:65099921-65099940 | None:intergenic | 25.0% |
| ! | TTGCTTATAAAAAGAAATGG+AGG | - | chr4_2:65099997-65100016 | Msa0615640:intron | 25.0% |
| ! | TGCTTATAAAAAGAAATGGA+GGG | - | chr4_2:65099998-65100017 | Msa0615640:intron | 25.0% |
| ! | CTTTCACTTTGCTAATTTAT+GGG | + | chr4_2:65100041-65100060 | None:intergenic | 25.0% |
| ! | AGAGATTAATGCTATCAAAA+AGG | - | chr4_2:65100133-65100152 | Msa0615640:intron | 25.0% |
| ! | AAAAGTTAAATAACAGGTTG+GGG | + | chr4_2:65100658-65100677 | None:intergenic | 25.0% |
| ! | TTAATGATTTCTTTACTGTG+TGG | - | chr4_2:65100745-65100764 | Msa0615640:CDS | 25.0% |
| !! | AACATATCATATCCTTTTAC+TGG | - | chr4_2:65100989-65101008 | Msa0615640:CDS | 25.0% |
| ! | GCAAACAAAATGATTACATA+TGG | + | chr4_2:65101037-65101056 | None:intergenic | 25.0% |
| ! | AGCATAAAATGAACAATTAC+AGG | + | chr4_2:65101549-65101568 | None:intergenic | 25.0% |
| !!! | AGAACTTTTTAAAAGTAGCA+CGG | - | chr4_2:65101610-65101629 | Msa0615640:CDS | 25.0% |
| !! | AATGCTTAAATAAGCTCTTT+TGG | + | chr4_2:65101677-65101696 | None:intergenic | 25.0% |
| !!! | TACATTTAGCTTGTTAAGAA+TGG | - | chr4_2:65101818-65101837 | Msa0615640:five_prime_UTR | 25.0% |
| ! | TTTTCTTGCATTGGAAATTC+CGG | + | chr4_2:65097301-65097320 | None:intergenic | 30.0% |
| GCCATATTTGTAATAGCATA+AGG | + | chr4_2:65098146-65098165 | None:intergenic | 30.0% | |
| !!! | CTTTTTTGGATCATGTACAA+AGG | + | chr4_2:65098638-65098657 | None:intergenic | 30.0% |
| !! | CGAGAGTACTATAACTTTAA+AGG | - | chr4_2:65098765-65098784 | Msa0615640:CDS | 30.0% |
| AAAAATAGAGTAAGCTGGAA+AGG | + | chr4_2:65099074-65099093 | None:intergenic | 30.0% | |
| AACAGAAAAATAGAGTAAGC+TGG | + | chr4_2:65099079-65099098 | None:intergenic | 30.0% | |
| ! | TGTGTGTTTTCAACATCTTT+TGG | - | chr4_2:65099118-65099137 | Msa0615640:intron | 30.0% |
| ! | TTTCAACATCTTTTGGTACA+CGG | - | chr4_2:65099125-65099144 | Msa0615640:intron | 30.0% |
| !! | ATAGTGAGAGCATTATTGAA+GGG | - | chr4_2:65099463-65099482 | Msa0615640:intron | 30.0% |
| ATTATTGAAGGGAGAAACTA+AGG | - | chr4_2:65099474-65099493 | Msa0615640:intron | 30.0% | |
| TAAAACATCAATCGGATGTA+AGG | - | chr4_2:65099659-65099678 | Msa0615640:intron | 30.0% | |
| AAAACATCAATCGGATGTAA+GGG | - | chr4_2:65099660-65099679 | Msa0615640:intron | 30.0% | |
| ! | AAGTGGAAAGACAATTTGTT+AGG | - | chr4_2:65099778-65099797 | Msa0615640:intron | 30.0% |
| TGCTTATAAAAAGAAACGGA+GGG | + | chr4_2:65099883-65099902 | None:intergenic | 30.0% | |
| TTGCTTATAAAAAGAAACGG+AGG | + | chr4_2:65099884-65099903 | None:intergenic | 30.0% | |
| GATGTATGTGGTTCATAATA+TGG | + | chr4_2:65099948-65099967 | None:intergenic | 30.0% | |
| GCTTTCACTTTGCTAATTTA+TGG | + | chr4_2:65100042-65100061 | None:intergenic | 30.0% | |
| !! | CATGTCATTTGCTTCTTTTT+AGG | - | chr4_2:65100061-65100080 | Msa0615640:intron | 30.0% |
| !! | CATTAATTTTGATGCCAGAA+GGG | + | chr4_2:65100169-65100188 | None:intergenic | 30.0% |
| !!! | GTTATTTTTGATTCATTCCC+TGG | - | chr4_2:65100260-65100279 | Msa0615640:CDS | 30.0% |
| ! | TGTTGTTATGGCTTTTATTG+TGG | + | chr4_2:65100371-65100390 | None:intergenic | 30.0% |
| ACAATAAAAGCCATAACAAC+AGG | - | chr4_2:65100370-65100389 | Msa0615640:intron | 30.0% | |
| CAATAAAAGCCATAACAACA+GGG | - | chr4_2:65100371-65100390 | Msa0615640:intron | 30.0% | |
| ATTAGAATCAACTGAGAGAA+TGG | - | chr4_2:65100470-65100489 | Msa0615640:intron | 30.0% | |
| TTAGAATCAACTGAGAGAAT+GGG | - | chr4_2:65100471-65100490 | Msa0615640:intron | 30.0% | |
| ! | ATGAAAGTTAATTTGAGACC+AGG | + | chr4_2:65100566-65100585 | None:intergenic | 30.0% |
| GGGTTTCATTTCTAATCATA+TGG | - | chr4_2:65100943-65100962 | Msa0615640:CDS | 30.0% | |
| !! | TGATTACATATGGTTCTGAA+AGG | + | chr4_2:65101027-65101046 | None:intergenic | 30.0% |
| !! | TGTAATCATTTTGTTTGCCT+TGG | - | chr4_2:65101039-65101058 | Msa0615640:CDS | 30.0% |
| ACGTGATAAAGACCATAATT+TGG | - | chr4_2:65101186-65101205 | Msa0615640:intron | 30.0% | |
| ATAAAGACCATAATTTGGAC+TGG | - | chr4_2:65101191-65101210 | Msa0615640:intron | 30.0% | |
| TTAGTTACCAGTCCAAATTA+TGG | + | chr4_2:65101201-65101220 | None:intergenic | 30.0% | |
| ! | TCAAATTCTTTTGGATTTGG+TGG | - | chr4_2:65101250-65101269 | Msa0615640:CDS | 30.0% |
| !! | GATTCGACAAAGTTTTATGT+TGG | - | chr4_2:65101365-65101384 | Msa0615640:CDS | 30.0% |
| ! | TGAATCAGTTCATAGCTTTT+TGG | - | chr4_2:65101785-65101804 | Msa0615640:five_prime_UTR | 30.0% |
| TTTCTTGCATTGGAAATTCC+GGG | + | chr4_2:65097300-65097319 | None:intergenic | 35.0% | |
| TAGATTGATAAAGAACGTGC+TGG | - | chr4_2:65098020-65098039 | Msa0615640:CDS | 35.0% | |
| AATCAGATTCTTAACTCCGT+CGG | + | chr4_2:65098087-65098106 | None:intergenic | 35.0% | |
| AATATGGCTTCAGCTTTACT+TGG | - | chr4_2:65098158-65098177 | Msa0615640:intron | 35.0% | |
| ATATGGCTTCAGCTTTACTT+GGG | - | chr4_2:65098159-65098178 | Msa0615640:intron | 35.0% | |
| ! | GCTTTACTTGGGATTGATTT+AGG | - | chr4_2:65098170-65098189 | Msa0615640:intron | 35.0% |
| ! | TTGGGATTGATTTAGGTTTC+AGG | - | chr4_2:65098177-65098196 | Msa0615640:intron | 35.0% |
| ! | TGGGATTGATTTAGGTTTCA+GGG | - | chr4_2:65098178-65098197 | Msa0615640:intron | 35.0% |
| ! | TGCCATTATTCCTATTGGTT+TGG | - | chr4_2:65098316-65098335 | Msa0615640:intron | 35.0% |
| !! | GCCATTATTCCTATTGGTTT+GGG | - | chr4_2:65098317-65098336 | Msa0615640:intron | 35.0% |
| !! | CCATTATTCCTATTGGTTTG+GGG | - | chr4_2:65098318-65098337 | Msa0615640:intron | 35.0% |
| !! | CATTATTCCTATTGGTTTGG+GGG | - | chr4_2:65098319-65098338 | Msa0615640:intron | 35.0% |
| !! | ATTATTCCTATTGGTTTGGG+GGG | - | chr4_2:65098320-65098339 | Msa0615640:intron | 35.0% |
| ! | TTTCACGAAGTGTCTATAAG+TGG | - | chr4_2:65098675-65098694 | Msa0615640:intron | 35.0% |
| ACCTATCATTGCTGAATACT+TGG | - | chr4_2:65098825-65098844 | Msa0615640:intron | 35.0% | |
| CCTATCATTGCTGAATACTT+GGG | - | chr4_2:65098826-65098845 | Msa0615640:intron | 35.0% | |
| ! | TTTTGGTACACGGTACAATA+GGG | - | chr4_2:65099135-65099154 | Msa0615640:intron | 35.0% |
| !! | CATAGTGAGAGCATTATTGA+AGG | - | chr4_2:65099462-65099481 | Msa0615640:intron | 35.0% |
| ! | TGTCTTGTATTTCTGCATAC+TGG | - | chr4_2:65099557-65099576 | Msa0615640:intron | 35.0% |
| AAACATCAATCGGATGTAAG+GGG | - | chr4_2:65099661-65099680 | Msa0615640:intron | 35.0% | |
| AAACTGATTATTTGCAGAGG+AGG | + | chr4_2:65099698-65099717 | None:intergenic | 35.0% | |
| TGATGAATGAGCAAGTAACT+AGG | + | chr4_2:65099724-65099743 | None:intergenic | 35.0% | |
| TAGTTACTTGCTCATTCATC+AGG | - | chr4_2:65099723-65099742 | Msa0615640:intron | 35.0% | |
| TCATTCATCAGGTCAAATAG+AGG | - | chr4_2:65099734-65099753 | Msa0615640:intron | 35.0% | |
| CATTCATCAGGTCAAATAGA+GGG | - | chr4_2:65099735-65099754 | Msa0615640:intron | 35.0% | |
| AAGCTGCTAGCATAAATAAG+TGG | - | chr4_2:65099761-65099780 | Msa0615640:intron | 35.0% | |
| !! | GCATTAATTTTGATGCCAGA+AGG | + | chr4_2:65100170-65100189 | None:intergenic | 35.0% |
| CATCAAAATTAATGCCACCA+AGG | - | chr4_2:65100175-65100194 | Msa0615640:intron | 35.0% | |
| ATGACATGATAATACCTTGG+TGG | + | chr4_2:65100192-65100211 | None:intergenic | 35.0% | |
| ! | ACCAAGGTATTATCATGTCA+TGG | - | chr4_2:65100191-65100210 | Msa0615640:CDS | 35.0% |
| TCCATGACATGATAATACCT+TGG | + | chr4_2:65100195-65100214 | None:intergenic | 35.0% | |
| ATAAAACAGAAAGCTTTCGC+TGG | + | chr4_2:65100228-65100247 | None:intergenic | 35.0% | |
| ! | TCTGTTTTATAGATCATCGC+AGG | - | chr4_2:65100238-65100257 | Msa0615640:CDS | 35.0% |
| ACAGCATATGCATCAGTTAA+TGG | + | chr4_2:65100286-65100305 | None:intergenic | 35.0% | |
| TGTGATACCAGTCTATGATA+GGG | - | chr4_2:65100308-65100327 | Msa0615640:CDS | 35.0% | |
| CGTACGAATTGATTGATTGA+TGG | + | chr4_2:65100406-65100425 | None:intergenic | 35.0% | |
| ! | AGAGAATGGGCTTTCATTAT+TGG | - | chr4_2:65100484-65100503 | Msa0615640:intron | 35.0% |
| ! | ACCTTTTCTTTTTACTCACG+TGG | - | chr4_2:65100830-65100849 | Msa0615640:CDS | 35.0% |
| ACCACGTGAGTAAAAAGAAA+AGG | + | chr4_2:65100834-65100853 | None:intergenic | 35.0% | |
| !! | ATGGTTCTGAAAGGCAAAAT+AGG | + | chr4_2:65101018-65101037 | None:intergenic | 35.0% |
| CAGCAGCATGAAATTAATGT+TGG | - | chr4_2:65101121-65101140 | Msa0615640:intron | 35.0% | |
| ACGTGAAATGAAAAATGCAC+TGG | + | chr4_2:65101170-65101189 | None:intergenic | 35.0% | |
| !! | AATTTGGACTGGTAACTAAC+TGG | - | chr4_2:65101202-65101221 | Msa0615640:intron | 35.0% |
| TGCCTGGAAGAAAGAAAAAA+AGG | + | chr4_2:65101228-65101247 | None:intergenic | 35.0% | |
| ! | CCAAAAGAATTTGAAATGCC+TGG | + | chr4_2:65101244-65101263 | None:intergenic | 35.0% |
| ! | CCAGGCATTTCAAATTCTTT+TGG | - | chr4_2:65101241-65101260 | Msa0615640:CDS | 35.0% |
| ACATGAAGAGCAGATAAACT+TGG | + | chr4_2:65101319-65101338 | None:intergenic | 35.0% | |
| !! | TTGTCGAATCTCTAAGACAT+GGG | + | chr4_2:65101355-65101374 | None:intergenic | 35.0% |
| !! | TTTGTCGAATCTCTAAGACA+TGG | + | chr4_2:65101356-65101375 | None:intergenic | 35.0% |
| !!! | ACAACCCTCTTTTTTCGTTT+GGG | - | chr4_2:65101403-65101422 | Msa0615640:CDS | 35.0% |
| TTGTTCTCTCTACATCATTG+AGG | - | chr4_2:65101487-65101506 | Msa0615640:CDS | 35.0% | |
| TTCTACAGCAAAACAGTCTT+TGG | + | chr4_2:65101594-65101613 | None:intergenic | 35.0% | |
| ! | TTGTTTGGTAGTTAGACTTG+CGG | - | chr4_2:65101641-65101660 | Msa0615640:CDS | 35.0% |
| ACTGAGAGAATGAAGCTGAA+TGG | + | chr4_2:65097434-65097453 | None:intergenic | 40.0% | |
| ! | GTGGGATCACATTGATTGAT+AGG | - | chr4_2:65097732-65097751 | Msa0615640:intron | 40.0% |
| ATGCTTCCAAATTCCCTACT+CGG | - | chr4_2:65097759-65097778 | Msa0615640:intron | 40.0% | |
| ATCTTCAAGTGCTTTCTTCC+CGG | + | chr4_2:65097879-65097898 | None:intergenic | 40.0% | |
| !! | AAGAAAGCACTTGAAGATGC+TGG | - | chr4_2:65097881-65097900 | Msa0615640:intron | 40.0% |
| AACGGATCCCTAATTGGATT+TGG | - | chr4_2:65097980-65097999 | Msa0615640:intron | 40.0% | |
| !! | TAAAGAACGTGCTGGTGTTT+TGG | - | chr4_2:65098028-65098047 | Msa0615640:CDS | 40.0% |
| ! | GGGATTGATTTAGGTTTCAG+GGG | - | chr4_2:65098179-65098198 | Msa0615640:intron | 40.0% |
| GAAGCTGCCATTATTCCTAT+TGG | - | chr4_2:65098311-65098330 | Msa0615640:intron | 40.0% | |
| CCCCAAACCAATAGGAATAA+TGG | + | chr4_2:65098321-65098340 | None:intergenic | 40.0% | |
| ATGACCCTAAAACTGCTTCT+AGG | - | chr4_2:65098378-65098397 | Msa0615640:intron | 40.0% | |
| ! | AAGGCCTAGAAGCAGTTTTA+GGG | + | chr4_2:65098385-65098404 | None:intergenic | 40.0% |
| TAAAACTGCTTCTAGGCCTT+GGG | - | chr4_2:65098385-65098404 | Msa0615640:intron | 40.0% | |
| !!! | AGACCGTGATGGTTTTGTTA+TGG | - | chr4_2:65098412-65098431 | Msa0615640:intron | 40.0% |
| !!! | GACCGTGATGGTTTTGTTAT+GGG | - | chr4_2:65098413-65098432 | Msa0615640:intron | 40.0% |
| CACCCATAACAAAACCATCA+CGG | + | chr4_2:65098418-65098437 | None:intergenic | 40.0% | |
| !!! | GATGGTTTTGTTATGGGTGA+AGG | - | chr4_2:65098419-65098438 | Msa0615640:intron | 40.0% |
| CCCAAGTATTCAGCAATGAT+AGG | + | chr4_2:65098829-65098848 | None:intergenic | 40.0% | |
| ATCATTGCTGAATACTTGGG+AGG | - | chr4_2:65098829-65098848 | Msa0615640:intron | 40.0% | |
| ATGACTGATCCAAGATCTGA+TGG | - | chr4_2:65098877-65098896 | Msa0615640:intron | 40.0% | |
| TGACTGATCCAAGATCTGAT+GGG | - | chr4_2:65098878-65098897 | Msa0615640:intron | 40.0% | |
| AGAGTAAGACAATACCTCCT+CGG | + | chr4_2:65098956-65098975 | None:intergenic | 40.0% | |
| GGAAAGGAAAAACACACTGA+AGG | + | chr4_2:65099058-65099077 | None:intergenic | 40.0% | |
| ! | CTTTTGGTACACGGTACAAT+AGG | - | chr4_2:65099134-65099153 | Msa0615640:intron | 40.0% |
| TTTGGTACACGGTACAATAG+GGG | - | chr4_2:65099136-65099155 | Msa0615640:intron | 40.0% | |
| CTTAGCAACAGCTTTACAAG+AGG | + | chr4_2:65099193-65099212 | None:intergenic | 40.0% | |
| TATGTAAAGCTGTCTGCACA+CGG | - | chr4_2:65099343-65099362 | Msa0615640:intron | 40.0% | |
| ACTATGGCGTTAGCATTTAG+TGG | - | chr4_2:65099389-65099408 | Msa0615640:intron | 40.0% | |
| ! | CTAAGGCCTCTAAGAAATCT+TGG | - | chr4_2:65099491-65099510 | Msa0615640:intron | 40.0% |
| GTCAAGCCAAGATTTCTTAG+AGG | + | chr4_2:65099500-65099519 | None:intergenic | 40.0% | |
| GCTAACATAATGTAGCATCC+TGG | + | chr4_2:65099597-65099616 | None:intergenic | 40.0% | |
| GACAAATCAACATGCAGCAA+TGG | + | chr4_2:65099804-65099823 | None:intergenic | 40.0% | |
| !! | AAGGTTTTCAAGAACCCTTC+TGG | - | chr4_2:65100152-65100171 | Msa0615640:intron | 40.0% |
| TATGCATCAGTTAATGGCCA+GGG | + | chr4_2:65100280-65100299 | None:intergenic | 40.0% | |
| ATATGCATCAGTTAATGGCC+AGG | + | chr4_2:65100281-65100300 | None:intergenic | 40.0% | |
| CTGTGATACCAGTCTATGAT+AGG | - | chr4_2:65100307-65100326 | Msa0615640:CDS | 40.0% | |
| TAAAAGCCATAACAACAGGG+TGG | - | chr4_2:65100374-65100393 | Msa0615640:intron | 40.0% | |
| ! | ACATTTTATCTGCCACCTCT+TGG | - | chr4_2:65100532-65100551 | Msa0615640:intron | 40.0% |
| ! | GGTTGGGGTACCAATAAATA+AGG | + | chr4_2:65100643-65100662 | None:intergenic | 40.0% |
| ! | TCAAGTCGCGTTGTTATTGT+GGG | - | chr4_2:65100900-65100919 | Msa0615640:CDS | 40.0% |
| TATTGTGGGGTGGATAAAAG+AGG | - | chr4_2:65100914-65100933 | Msa0615640:CDS | 40.0% | |
| !! | GGTGGATAAAAGAGGTGTTT+GGG | - | chr4_2:65100922-65100941 | Msa0615640:CDS | 40.0% |
| !! | GTGGATAAAAGAGGTGTTTG+GGG | - | chr4_2:65100923-65100942 | Msa0615640:CDS | 40.0% |
| CAAAATAGGAGGCCAGTAAA+AGG | + | chr4_2:65101004-65101023 | None:intergenic | 40.0% | |
| !! | GTTCTGAAAGGCAAAATAGG+AGG | + | chr4_2:65101015-65101034 | None:intergenic | 40.0% |
| TTTGTTTGCCTTGGTCTCTT+TGG | - | chr4_2:65101048-65101067 | Msa0615640:CDS | 40.0% | |
| TCAAAATCAACTGCAGGTTC+TGG | + | chr4_2:65101082-65101101 | None:intergenic | 40.0% | |
| ACGGTATCAAAATCAACTGC+AGG | + | chr4_2:65101088-65101107 | None:intergenic | 40.0% | |
| !! | TGCAGTTGATTTTGATACCG+TGG | - | chr4_2:65101087-65101106 | Msa0615640:CDS | 40.0% |
| !!! | GGCCTTTTTTTCTTTCTTCC+AGG | - | chr4_2:65101223-65101242 | Msa0615640:CDS | 40.0% |
| GCAGATAAACTTGGCAATCA+GGG | + | chr4_2:65101310-65101329 | None:intergenic | 40.0% | |
| AGCAGATAAACTTGGCAATC+AGG | + | chr4_2:65101311-65101330 | None:intergenic | 40.0% | |
| !! | AAGTTTTATGTTGGCTGTCG+AGG | - | chr4_2:65101374-65101393 | Msa0615640:CDS | 40.0% |
| CGAAAAAAGAGGGTTGTGTT+AGG | + | chr4_2:65101400-65101419 | None:intergenic | 40.0% | |
| !!! | CACAACCCTCTTTTTTCGTT+TGG | - | chr4_2:65101402-65101421 | Msa0615640:CDS | 40.0% |
| !! | AGAGCCTTGCTATTAATAGC+CGG | + | chr4_2:65101436-65101455 | None:intergenic | 40.0% |
| AAGGCTCTTCATGTAGAACA+CGG | - | chr4_2:65101448-65101467 | Msa0615640:CDS | 40.0% | |
| AGCACGGAGATTTCATTGTT+TGG | - | chr4_2:65101626-65101645 | Msa0615640:CDS | 40.0% | |
| TGAAGCTGAATGGTGTGATG+AGG | + | chr4_2:65097424-65097443 | None:intergenic | 45.0% | |
| !!! | TTGGAGGATTTTTTGCGGAG+TGG | + | chr4_2:65097527-65097546 | None:intergenic | 45.0% |
| !!! | CGGCATTGGAGGATTTTTTG+CGG | + | chr4_2:65097532-65097551 | None:intergenic | 45.0% |
| ! | ATCCTTCTCTCTTTGAGGAG+CGG | + | chr4_2:65097618-65097637 | None:intergenic | 45.0% |
| TTGGGATCCTTCTCTCTTTG+AGG | + | chr4_2:65097623-65097642 | None:intergenic | 45.0% | |
| GTGATCACAACACGCTTCTT+GGG | + | chr4_2:65097641-65097660 | None:intergenic | 45.0% | |
| AGTGATCACAACACGCTTCT+TGG | + | chr4_2:65097642-65097661 | None:intergenic | 45.0% | |
| ! | AAGAAGCGTGTTGTGATCAC+TGG | - | chr4_2:65097641-65097660 | Msa0615640:three_prime_UTR | 45.0% |
| GAACTGAACGGATCCCTAAT+TGG | - | chr4_2:65097974-65097993 | Msa0615640:intron | 45.0% | |
| !!! | AACGTGCTGGTGTTTTGGTT+GGG | - | chr4_2:65098033-65098052 | Msa0615640:CDS | 45.0% |
| !!! | TGTTTTGGTTGGGTCAGGAA+TGG | - | chr4_2:65098043-65098062 | Msa0615640:CDS | 45.0% |
| !!! | GTTTTGGTTGGGTCAGGAAT+GGG | - | chr4_2:65098044-65098063 | Msa0615640:CDS | 45.0% |
| GTCAGGAATGGGTGGTTTAA+CGG | - | chr4_2:65098055-65098074 | Msa0615640:intron | 45.0% | |
| ! | GGTTTAACGGTGTTTTCCGA+CGG | - | chr4_2:65098068-65098087 | Msa0615640:intron | 45.0% |
| TGCTGCCAATCACATTCGTA+GGG | - | chr4_2:65098256-65098275 | Msa0615640:intron | 45.0% | |
| !! | TGAGGCCGATTTGATGATTG+CGG | - | chr4_2:65098280-65098299 | Msa0615640:intron | 45.0% |
| ACAAAACCCCCCAAACCAAT+AGG | + | chr4_2:65098329-65098348 | None:intergenic | 45.0% | |
| ! | CAAGGCCTAGAAGCAGTTTT+AGG | + | chr4_2:65098386-65098405 | None:intergenic | 45.0% |
| CTAAAACTGCTTCTAGGCCT+TGG | - | chr4_2:65098384-65098403 | Msa0615640:intron | 45.0% | |
| ! | TTTGTTATGGGTGAAGGTGC+TGG | - | chr4_2:65098425-65098444 | Msa0615640:intron | 45.0% |
| !!! | AAGGTGCTGGAGTTTTGGTA+AGG | - | chr4_2:65098438-65098457 | Msa0615640:intron | 45.0% |
| GAGTAAGACAATACCTCCTC+GGG | + | chr4_2:65098955-65098974 | None:intergenic | 45.0% | |
| !! | CTGGTATCGATATCAGTACC+AGG | - | chr4_2:65099576-65099595 | Msa0615640:intron | 45.0% |
| CATGCAACTTCCACTCTTGT+TGG | - | chr4_2:65100101-65100120 | Msa0615640:intron | 45.0% | |
| !! | TTCCACTCTTGTTGGTGACT+TGG | - | chr4_2:65100109-65100128 | Msa0615640:intron | 45.0% |
| TCTGCCACCTCTTGGAATAA+TGG | - | chr4_2:65100540-65100559 | Msa0615640:intron | 45.0% | |
| ! | GTCAAGTCGCGTTGTTATTG+TGG | - | chr4_2:65100899-65100918 | Msa0615640:CDS | 45.0% |
| ! | CAAGTCGCGTTGTTATTGTG+GGG | - | chr4_2:65100901-65100920 | Msa0615640:CDS | 45.0% |
| !! | GGGTGGATAAAAGAGGTGTT+TGG | - | chr4_2:65100921-65100940 | Msa0615640:CDS | 45.0% |
| ATTCTGCACCAAAGAGACCA+AGG | + | chr4_2:65101059-65101078 | None:intergenic | 45.0% | |
| CGAGCCCAAACGAAAAAAGA+GGG | + | chr4_2:65101410-65101429 | None:intergenic | 45.0% | |
| !!! | CCTCTTTTTTCGTTTGGGCT+CGG | - | chr4_2:65101408-65101427 | Msa0615640:CDS | 45.0% |
| !!! | CTCTTTTTTCGTTTGGGCTC+GGG | - | chr4_2:65101409-65101428 | Msa0615640:CDS | 45.0% |
| ! | TTTTTGCGGAGTGGTTCGAG+TGG | + | chr4_2:65097518-65097537 | None:intergenic | 50.0% |
| !!! | GAGTCTCTTTGGGGTTTTGG+CGG | + | chr4_2:65097567-65097586 | None:intergenic | 50.0% |
| !!! | GGAGAGTCTCTTTGGGGTTT+TGG | + | chr4_2:65097570-65097589 | None:intergenic | 50.0% |
| AGACGACGGAGAGTCTCTTT+GGG | + | chr4_2:65097577-65097596 | None:intergenic | 50.0% | |
| CGTGTTGTGATCACTGGCAT+GGG | - | chr4_2:65097647-65097666 | Msa0615640:three_prime_UTR | 50.0% | |
| TTCTACGAGAAGCTTCTCGC+CGG | - | chr4_2:65097704-65097723 | Msa0615640:intron | 50.0% | |
| CAATGTGATCCCACTCTCAC+CGG | + | chr4_2:65097726-65097745 | None:intergenic | 50.0% | |
| TGCGAACCGAGTAGGGAATT+TGG | + | chr4_2:65097768-65097787 | None:intergenic | 50.0% | |
| ! | AAATTCCCTACTCGGTTCGC+AGG | - | chr4_2:65097767-65097786 | Msa0615640:intron | 50.0% |
| !! | ATCCGTGGGTTTAGCTCTGA+GGG | - | chr4_2:65097794-65097813 | Msa0615640:intron | 50.0% |
| AACCCTCAGAGCTAAACCCA+CGG | + | chr4_2:65097799-65097818 | None:intergenic | 50.0% | |
| !! | AGCTCTGAGGGTTACATCGA+CGG | - | chr4_2:65097806-65097825 | Msa0615640:three_prime_UTR | 50.0% |
| ACATCGACGGGAAGAATGAC+CGG | - | chr4_2:65097819-65097838 | Msa0615640:exon | 50.0% | |
| GGAGACAATCATCCTGTCTC+CGG | + | chr4_2:65097841-65097860 | None:intergenic | 50.0% | |
| GGAGACAGGATGATTGTCTC+CGG | - | chr4_2:65097840-65097859 | Msa0615640:CDS | 50.0% | |
| ! | GCACTTGAAGATGCTGGTCT+CGG | - | chr4_2:65097887-65097906 | Msa0615640:intron | 50.0% |
| ! | CGGTGCCGAAAATCTCGATA+AGG | - | chr4_2:65097907-65097926 | Msa0615640:intron | 50.0% |
| !!! | GAACGTGCTGGTGTTTTGGT+TGG | - | chr4_2:65098032-65098051 | Msa0615640:CDS | 50.0% |
| CTGCTGCCAATCACATTCGT+AGG | - | chr4_2:65098255-65098274 | Msa0615640:intron | 50.0% | |
| GCTGCCAATCACATTCGTAG+GGG | - | chr4_2:65098257-65098276 | Msa0615640:intron | 50.0% | |
| CTCACCCCTACGAATGTGAT+TGG | + | chr4_2:65098264-65098283 | None:intergenic | 50.0% | |
| CAATCACATTCGTAGGGGTG+AGG | - | chr4_2:65098262-65098281 | Msa0615640:intron | 50.0% | |
| !! | GAGGCCGATTTGATGATTGC+GGG | - | chr4_2:65098281-65098300 | Msa0615640:intron | 50.0% |
| CCCACCCGCAATCATCAAAT+CGG | + | chr4_2:65098288-65098307 | None:intergenic | 50.0% | |
| ! | CCGATTTGATGATTGCGGGT+GGG | - | chr4_2:65098285-65098304 | Msa0615640:intron | 50.0% |
| CCATCACGGTCTTTATCCCA+AGG | + | chr4_2:65098404-65098423 | None:intergenic | 50.0% | |
| CCTTGGGATAAAGACCGTGA+TGG | - | chr4_2:65098401-65098420 | Msa0615640:intron | 50.0% | |
| AAAACAGGACACACGCGACA+TGG | + | chr4_2:65098701-65098720 | None:intergenic | 50.0% | |
| CTCGCTTCATGGCATGTTCA+AGG | + | chr4_2:65098801-65098820 | None:intergenic | 50.0% | |
| CTTGAACATGCCATGAAGCG+AGG | - | chr4_2:65098799-65098818 | Msa0615640:CDS | 50.0% | |
| !! | GATCCAAGATCTGATGGGCT+TGG | - | chr4_2:65098883-65098902 | Msa0615640:intron | 50.0% |
| GTACACGGTACAATAGGGGA+TGG | - | chr4_2:65099140-65099159 | Msa0615640:intron | 50.0% | |
| TAAAGCTGTCTGCACACGGT+GGG | - | chr4_2:65099347-65099366 | Msa0615640:intron | 50.0% | |
| TGTGGGAAGGAGTAGCACTA+TGG | - | chr4_2:65099373-65099392 | Msa0615640:intron | 50.0% | |
| TGCCAAGTCACCAACAAGAG+TGG | + | chr4_2:65100114-65100133 | None:intergenic | 50.0% | |
| !! | TCTATGATAGGGCACTGCCT+TGG | - | chr4_2:65100319-65100338 | Msa0615640:CDS | 50.0% |
| ATGCAGCCACCCTGTTGTTA+TGG | + | chr4_2:65100383-65100402 | None:intergenic | 50.0% | |
| CAGGCCATTATTCCAAGAGG+TGG | + | chr4_2:65100547-65100566 | None:intergenic | 50.0% | |
| CACCTCTTGGAATAATGGCC+TGG | - | chr4_2:65100545-65100564 | Msa0615640:intron | 50.0% | |
| GACCAGGCCATTATTCCAAG+AGG | + | chr4_2:65100550-65100569 | None:intergenic | 50.0% | |
| ! | CTGCTGCTTGACATTTGCCA+CGG | + | chr4_2:65101107-65101126 | None:intergenic | 50.0% |
| TGGCAATCAGGGTCTGAAAG+CGG | + | chr4_2:65101299-65101318 | None:intergenic | 50.0% | |
| CCGAGCCCAAACGAAAAAAG+AGG | + | chr4_2:65101411-65101430 | None:intergenic | 50.0% | |
| GGGACCGGCTATTAATAGCA+AGG | - | chr4_2:65101429-65101448 | Msa0615640:CDS | 50.0% | |
| GGAGTGGTTCGAGTGGTGAA+GGG | + | chr4_2:65097511-65097530 | None:intergenic | 55.0% | |
| !!! | TCTCTTTGGGGTTTTGGCGG+TGG | + | chr4_2:65097564-65097583 | None:intergenic | 55.0% |
| GACGACGGAGAGTCTCTTTG+GGG | + | chr4_2:65097576-65097595 | None:intergenic | 55.0% | |
| GAGACGACGGAGAGTCTCTT+TGG | + | chr4_2:65097578-65097597 | None:intergenic | 55.0% | |
| AGCCGCTCCTCAAAGAGAGA+AGG | - | chr4_2:65097613-65097632 | Msa0615640:three_prime_UTR | 55.0% | |
| GCGTGTTGTGATCACTGGCA+TGG | - | chr4_2:65097646-65097665 | Msa0615640:three_prime_UTR | 55.0% | |
| GTTGTGATCACTGGCATGGG+TGG | - | chr4_2:65097650-65097669 | Msa0615640:three_prime_UTR | 55.0% | |
| ATGGGTGGCGTCACTGTACA+TGG | - | chr4_2:65097665-65097684 | Msa0615640:intron | 55.0% | |
| TCTGACCTGCGAACCGAGTA+GGG | + | chr4_2:65097775-65097794 | None:intergenic | 55.0% | |
| ATCTGACCTGCGAACCGAGT+AGG | + | chr4_2:65097776-65097795 | None:intergenic | 55.0% | |
| !! | GATCCGTGGGTTTAGCTCTG+AGG | - | chr4_2:65097793-65097812 | Msa0615640:intron | 55.0% |
| !! | GCTCTGAGGGTTACATCGAC+GGG | - | chr4_2:65097807-65097826 | Msa0615640:three_prime_UTR | 55.0% |
| !!! | GCTGGTGTTTTGGTTGGGTC+AGG | - | chr4_2:65098038-65098057 | Msa0615640:CDS | 55.0% |
| TTGGTTGGGTCAGGAATGGG+TGG | - | chr4_2:65098047-65098066 | Msa0615640:intron | 55.0% | |
| !! | GCCGATTTGATGATTGCGGG+TGG | - | chr4_2:65098284-65098303 | Msa0615640:intron | 55.0% |
| !!! | GGGTGAAGGTGCTGGAGTTT+TGG | - | chr4_2:65098433-65098452 | Msa0615640:intron | 55.0% |
| GATAGGTGCACCTCGCTTCA+TGG | + | chr4_2:65098812-65098831 | None:intergenic | 55.0% | |
| ACGCCAAGCCCATCAGATCT+TGG | + | chr4_2:65098889-65098908 | None:intergenic | 55.0% | |
| ! | CAGAGCAGTCTTGTAGACGC+CGG | - | chr4_2:65098922-65098941 | Msa0615640:intron | 55.0% |
| CGGTACAATAGGGGATGGCA+TGG | - | chr4_2:65099145-65099164 | Msa0615640:intron | 55.0% | |
| GTAAAGCTGTCTGCACACGG+TGG | - | chr4_2:65099346-65099365 | Msa0615640:intron | 55.0% | |
| AAAGCTGTCTGCACACGGTG+GGG | - | chr4_2:65099348-65099367 | Msa0615640:intron | 55.0% | |
| TCGGATGTAAGGGGCCAAGT+TGG | - | chr4_2:65099670-65099689 | Msa0615640:intron | 55.0% | |
| !! | TTGCAGAGGAGGCACCAACT+TGG | + | chr4_2:65099687-65099706 | None:intergenic | 55.0% |
| GGCAGTGCCCTATCATAGAC+TGG | + | chr4_2:65100318-65100337 | None:intergenic | 55.0% | |
| ! | GTCGCGTTGTTATTGTGGGG+TGG | - | chr4_2:65100904-65100923 | Msa0615640:CDS | 55.0% |
| ! | TGGTGGACACAACTCTGTCG+TGG | - | chr4_2:65101267-65101286 | Msa0615640:CDS | 55.0% |
| ! | TTTTCGTTTGGGCTCGGGAC+CGG | - | chr4_2:65101414-65101433 | Msa0615640:CDS | 55.0% |
| GGTGAAGGGCGGAGAGTGAA+GGG | + | chr4_2:65097497-65097516 | None:intergenic | 60.0% | |
| TGGTGAAGGGCGGAGAGTGA+AGG | + | chr4_2:65097498-65097517 | None:intergenic | 60.0% | |
| GTGGTTCGAGTGGTGAAGGG+CGG | + | chr4_2:65097508-65097527 | None:intergenic | 60.0% | |
| CGGAGTGGTTCGAGTGGTGA+AGG | + | chr4_2:65097512-65097531 | None:intergenic | 60.0% | |
| !!! | CTTTGGGGTTTTGGCGGTGG+TGG | + | chr4_2:65097561-65097580 | None:intergenic | 60.0% |
| TTGAGGAGCGGCTGTGGTGA+CGG | + | chr4_2:65097606-65097625 | None:intergenic | 60.0% | |
| ! | CTCTCTTTGAGGAGCGGCTG+TGG | + | chr4_2:65097612-65097631 | None:intergenic | 60.0% |
| AAGCTTCTCGCCGGTGAGAG+TGG | - | chr4_2:65097713-65097732 | Msa0615640:intron | 60.0% | |
| AGCTTCTCGCCGGTGAGAGT+GGG | - | chr4_2:65097714-65097733 | Msa0615640:intron | 60.0% | |
| GGTTCGCAGGTCAGATCCGT+GGG | - | chr4_2:65097780-65097799 | Msa0615640:intron | 60.0% | |
| CGGGAAGAATGACCGGAGAC+AGG | - | chr4_2:65097826-65097845 | Msa0615640:exon | 60.0% | |
| CTCCGGTACTGCAATGTCGC+CGG | - | chr4_2:65097857-65097876 | Msa0615640:CDS | 60.0% | |
| TCCGGTACTGCAATGTCGCC+GGG | - | chr4_2:65097858-65097877 | Msa0615640:CDS | 60.0% | |
| TCCCGGCGACATTGCAGTAC+CGG | + | chr4_2:65097862-65097881 | None:intergenic | 60.0% | |
| CGGCGTCTACAAGACTGCTC+TGG | + | chr4_2:65098924-65098943 | None:intergenic | 60.0% | |
| TACCTCCTCGGGTGACACAC+CGG | + | chr4_2:65098944-65098963 | None:intergenic | 60.0% | |
| !!! | GGTTTTGGCGGTGGTGGTGG+CGG | + | chr4_2:65097555-65097574 | None:intergenic | 65.0% |
| !! | TGGGGTTTTGGCGGTGGTGG+TGG | + | chr4_2:65097558-65097577 | None:intergenic | 65.0% |
| ! | GGTGACGGCGGAAGAGACGA+CGG | + | chr4_2:65097591-65097610 | None:intergenic | 65.0% |
| CGGTTCGCAGGTCAGATCCG+TGG | - | chr4_2:65097779-65097798 | Msa0615640:intron | 65.0% | |
| TCTGCACACGGTGGGGTGTG+TGG | - | chr4_2:65099355-65099374 | Msa0615640:intron | 65.0% | |
| CTGCACACGGTGGGGTGTGT+GGG | - | chr4_2:65099356-65099375 | Msa0615640:intron | 65.0% | |
| ACACGGTGGGGTGTGTGGGA+AGG | - | chr4_2:65099360-65099379 | Msa0615640:intron | 65.0% | |
| !! | TTTGGCGGTGGTGGTGGCGG+CGG | + | chr4_2:65097552-65097571 | None:intergenic | 70.0% |
| !! | AGGAGCGGCTGTGGTGACGG+CGG | + | chr4_2:65097603-65097622 | None:intergenic | 70.0% |
| AGACGCCGGTGTGTCACCCG+AGG | - | chr4_2:65098936-65098955 | Msa0615640:intron | 70.0% | |
| GGCACTGCCTTGGCGCAGCT+GGG | - | chr4_2:65100329-65100348 | Msa0615640:CDS | 70.0% | |
| GCACTGCCTTGGCGCAGCTG+GGG | - | chr4_2:65100330-65100349 | Msa0615640:CDS | 70.0% | |
| CACTGCCTTGGCGCAGCTGG+GGG | - | chr4_2:65100331-65100350 | Msa0615640:CDS | 70.0% | |
| CCAAACCCCCAGCTGCGCCA+AGG | + | chr4_2:65100339-65100358 | None:intergenic | 70.0% | |
| CCTTGGCGCAGCTGGGGGTT+TGG | - | chr4_2:65100336-65100355 | Msa0615640:intron | 70.0% | |
| !! | GGTGGTGGCGGCGGCATTGG+AGG | + | chr4_2:65097543-65097562 | None:intergenic | 75.0% |
| !! | GGTGGTGGTGGCGGCGGCAT+TGG | + | chr4_2:65097546-65097565 | None:intergenic | 75.0% |
| CGCCGGTGTGTCACCCGAGG+AGG | - | chr4_2:65098939-65098958 | Msa0615640:intron | 75.0% | |
| ! | GGGCACTGCCTTGGCGCAGC+TGG | - | chr4_2:65100328-65100347 | Msa0615640:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 65097283 | 65101857 | 65097283 | ID=Msa0615640;Name=Msa0615640 |
| chr4_2 | mRNA | 65097283 | 65101857 | 65097283 | ID=Msa0615640-mRNA-1;Parent=Msa0615640;Name=Msa0615640-mRNA-1;_AED=0.07;_eAED=0.07;_QI=187|1|1|1|0.85|0.75|8|422|471 |
| chr4_2 | exon | 65097283 | 65097680 | 65097283 | ID=Msa0615640-mRNA-1:exon:18382;Parent=Msa0615640-mRNA-1 |
| chr4_2 | exon | 65097804 | 65097895 | 65097804 | ID=Msa0615640-mRNA-1:exon:18381;Parent=Msa0615640-mRNA-1 |
| chr4_2 | exon | 65097998 | 65098064 | 65097998 | ID=Msa0615640-mRNA-1:exon:18380;Parent=Msa0615640-mRNA-1 |
| chr4_2 | exon | 65098720 | 65098821 | 65098720 | ID=Msa0615640-mRNA-1:exon:18379;Parent=Msa0615640-mRNA-1 |
| chr4_2 | exon | 65098944 | 65099057 | 65098944 | ID=Msa0615640-mRNA-1:exon:18378;Parent=Msa0615640-mRNA-1 |
| chr4_2 | exon | 65100180 | 65100353 | 65100180 | ID=Msa0615640-mRNA-1:exon:18377;Parent=Msa0615640-mRNA-1 |
| chr4_2 | exon | 65100686 | 65101117 | 65100686 | ID=Msa0615640-mRNA-1:exon:18376;Parent=Msa0615640-mRNA-1 |
| chr4_2 | exon | 65101212 | 65101857 | 65101212 | ID=Msa0615640-mRNA-1:exon:18375;Parent=Msa0615640-mRNA-1 |
| chr4_2 | five_prime_UTR | 65101671 | 65101857 | 65101671 | ID=Msa0615640-mRNA-1:five_prime_utr;Parent=Msa0615640-mRNA-1 |
| chr4_2 | CDS | 65101212 | 65101670 | 65101212 | ID=Msa0615640-mRNA-1:cds;Parent=Msa0615640-mRNA-1 |
| chr4_2 | CDS | 65100686 | 65101117 | 65100686 | ID=Msa0615640-mRNA-1:cds;Parent=Msa0615640-mRNA-1 |
| chr4_2 | CDS | 65100180 | 65100353 | 65100180 | ID=Msa0615640-mRNA-1:cds;Parent=Msa0615640-mRNA-1 |
| chr4_2 | CDS | 65098944 | 65099057 | 65098944 | ID=Msa0615640-mRNA-1:cds;Parent=Msa0615640-mRNA-1 |
| chr4_2 | CDS | 65098720 | 65098821 | 65098720 | ID=Msa0615640-mRNA-1:cds;Parent=Msa0615640-mRNA-1 |
| chr4_2 | CDS | 65097998 | 65098064 | 65097998 | ID=Msa0615640-mRNA-1:cds;Parent=Msa0615640-mRNA-1 |
| chr4_2 | CDS | 65097828 | 65097895 | 65097828 | ID=Msa0615640-mRNA-1:cds;Parent=Msa0615640-mRNA-1 |
| chr4_2 | three_prime_UTR | 65097804 | 65097827 | 65097804 | ID=Msa0615640-mRNA-1:three_prime_utr;Parent=Msa0615640-mRNA-1 |
| chr4_2 | three_prime_UTR | 65097283 | 65097680 | 65097283 | ID=Msa0615640-mRNA-1:three_prime_utr;Parent=Msa0615640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
