AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0469810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0469810 MtrunA17_Chr3g0124631 94.269 698 36 1 1 694 1 698 0.0 1341
Msa0469810 MtrunA17_Chr1g0160041 76.403 695 162 2 1 693 1 695 0.0 1117
Msa0469810 MtrunA17_Chr3g0120731 61.295 695 265 2 3 693 33 727 0.0 899
Msa0469810 MtrunA17_Chr1g0205711 35.194 645 374 11 56 694 80 686 2.82e-119 372
Msa0469810 MtrunA17_Chr5g0396691 32.099 648 395 14 55 692 42 654 8.38e-103 328
Msa0469810 MtrunA17_Chr5g0396711 31.944 648 396 14 55 692 42 654 3.62e-100 321
Msa0469810 MtrunA17_Chr1g0194371 31.798 673 401 14 37 692 22 653 3.52e-98 316
Msa0469810 MtrunA17_Chr4g0034181 31.062 631 382 16 78 692 58 651 1.38e-93 304
Msa0469810 MtrunA17_Chr8g0388081 31.509 603 380 11 101 692 13 593 7.65e-92 297
Msa0469810 MtrunA17_Chr7g0270221 31.988 644 346 16 56 685 41 606 4.53e-91 296
Msa0469810 MtrunA17_Chr1g0162621 30.015 683 420 16 27 692 12 653 8.23e-91 296
Msa0469810 MtrunA17_Chr3g0121951 25.193 647 387 21 106 692 105 714 3.08e-38 151
Msa0469810 MtrunA17_Chr3g0121931 24.493 641 402 16 106 692 107 719 3.41e-38 151
Msa0469810 MtrunA17_Chr8g0377991 25.078 642 399 18 106 692 109 723 6.48e-35 141
Msa0469810 MtrunA17_Chr4g0039791 29.825 342 166 14 248 579 204 481 4.70e-25 110
Msa0469810 MtrunA17_Chr5g0409791 27.160 486 258 20 115 579 78 488 1.44e-24 108
Msa0469810 MtrunA17_Chr1g0157401 27.697 343 174 13 248 581 205 482 1.31e-20 96.3
Msa0469810 MtrunA17_Chr5g0409771 24.089 494 279 18 106 584 68 480 2.23e-19 92.4
Msa0469810 MtrunA17_Chr6g0471921 24.008 479 280 15 106 577 32 433 6.45e-17 84.3
Msa0469810 MtrunA17_Chr1g0197391 26.087 345 178 14 247 581 211 488 2.84e-16 82.8
Msa0469810 MtrunA17_Chr3g0109731 27.224 371 174 14 254 608 194 484 1.97e-15 80.1
Msa0469810 MtrunA17_Chr5g0433231 29.804 255 133 9 441 682 322 543 1.00e-14 77.8
Msa0469810 MtrunA17_Chr5g0433241 49.398 83 36 3 500 582 391 467 2.00e-13 73.6
Msa0469810 MtrunA17_Chr2g0334131 27.530 247 149 10 419 646 45 280 7.39e-13 69.7
Msa0469810 MtrunA17_Chr2g0327341 28.512 242 131 11 419 649 304 514 1.16e-12 70.9
Msa0469810 MtrunA17_Chr5g0396311 27.089 347 175 14 248 581 182 463 1.30e-12 70.9
Msa0469810 MtrunA17_Chr1g0180541 28.191 188 113 8 407 583 296 472 1.36e-12 70.9
Msa0469810 MtrunA17_Chr4g0028411 29.384 211 116 8 445 649 334 517 1.84e-12 70.5
Msa0469810 MtrunA17_Chr5g0433221 30.601 183 97 6 500 682 391 543 5.07e-12 68.9
Msa0469810 MtrunA17_Chr6g0471311 29.947 187 101 6 500 686 393 549 5.35e-12 68.9
Msa0469810 MtrunA17_Chr1g0180551 30.488 164 101 6 425 583 390 545 1.56e-11 67.8
Msa0469810 MtrunA17_Chr5g0395431 28.571 245 150 11 419 647 349 584 2.14e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0469810 AT1G77590.1 73.055 694 183 2 1 693 1 691 0.0 1092
Msa0469810 AT2G04350.2 64.339 673 237 1 24 693 48 720 0.0 913
Msa0469810 AT2G04350.1 64.339 673 237 1 24 693 48 720 0.0 913
Msa0469810 AT1G77590.2 75.686 547 130 1 147 693 2 545 0.0 889
Msa0469810 AT5G27600.1 36.318 603 350 12 100 694 113 689 9.99e-122 379
Msa0469810 AT3G05970.1 35.257 641 375 10 56 692 83 687 9.01e-117 366
Msa0469810 AT4G23850.1 32.569 654 386 17 54 692 42 655 4.09e-101 324
Msa0469810 AT1G64400.1 32.198 646 389 14 61 694 49 657 9.72e-100 320
Msa0469810 AT2G47240.1 31.336 651 398 12 56 694 41 654 6.12e-95 308
Msa0469810 AT2G47240.2 31.336 651 398 12 56 694 41 654 6.12e-95 308
Msa0469810 AT2G47240.3 31.336 651 398 12 56 694 41 654 6.12e-95 308
Msa0469810 AT4G11030.1 31.279 649 401 14 54 692 42 655 6.52e-95 308
Msa0469810 AT2G47240.4 32.085 614 382 11 93 694 5 595 1.12e-93 303
Msa0469810 AT1G49430.1 31.631 607 382 10 100 694 74 659 1.15e-92 302
Msa0469810 AT1G49430.2 32.080 452 274 10 100 539 74 504 2.97e-60 211
Msa0469810 AT3G23790.1 25.816 643 387 23 107 692 112 721 1.84e-39 155
Msa0469810 AT4G14070.1 25.697 646 377 22 106 693 127 727 2.29e-37 149
Msa0469810 AT4G19010.1 29.532 342 171 14 248 581 205 484 3.54e-25 110
Msa0469810 AT1G20500.1 27.679 336 176 11 248 579 198 470 1.11e-22 103
Msa0469810 AT1G20510.2 28.198 344 174 12 248 583 190 468 6.16e-21 97.1
Msa0469810 AT1G20510.1 28.529 340 170 12 248 579 190 464 1.17e-20 96.7
Msa0469810 AT1G20510.3 27.950 322 160 11 248 561 190 447 7.97e-19 90.5
Msa0469810 AT1G21540.1 28.324 346 165 13 251 581 191 468 7.42e-17 84.7
Msa0469810 AT5G38120.3 26.254 339 175 15 248 579 200 470 1.06e-15 80.9
Msa0469810 AT5G38120.4 26.254 339 175 15 248 579 200 470 1.20e-15 80.5
Msa0469810 AT5G38120.2 26.254 339 175 15 248 579 200 470 1.20e-15 80.5
Msa0469810 AT5G38120.1 26.254 339 175 15 248 579 200 470 1.37e-15 80.9
Msa0469810 AT5G16340.1 32.075 212 114 7 478 689 369 550 2.14e-15 80.1
Msa0469810 AT5G16370.1 30.194 361 158 15 248 588 186 472 3.33e-15 79.7
Msa0469810 AT1G75960.1 31.959 194 104 6 480 673 371 536 9.32e-15 78.2
Msa0469810 AT4G05160.1 28.033 239 136 9 419 649 309 519 6.36e-14 75.5
Msa0469810 AT1G77240.1 48.780 82 37 2 500 581 390 466 4.77e-13 72.8
Msa0469810 AT1G20480.1 33.537 164 92 7 422 579 333 485 5.71e-13 72.4
Msa0469810 AT1G21530.2 31.250 192 108 7 404 581 284 465 6.52e-13 72.4
Msa0469810 AT3G48990.1 31.361 169 98 5 418 581 281 436 6.75e-13 72.0
Msa0469810 AT1G21530.1 34.839 155 79 6 441 581 317 463 2.31e-12 70.5
Msa0469810 AT1G62940.1 25.348 359 177 15 245 584 179 465 4.80e-12 69.7
Msa0469810 AT3G21240.1 27.344 256 137 13 419 646 316 550 1.23e-11 68.2
Msa0469810 AT1G65880.1 30.233 258 134 11 422 660 305 535 3.66e-11 66.6
Msa0469810 AT3G21230.1 26.423 246 153 10 419 647 331 565 6.80e-11 65.9

Find 168 sgRNAs with CRISPR-Local

Find 632 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTGGTGGTGCACCCCTTTC+TGG 0.130378 3_3:+71800219 Msa0469810:CDS
TGGTAGCTGGTTTGGTGCTT+GGG 0.253560 3_3:+71800116 Msa0469810:CDS
TTCTCCCAACGAAGCATAAA+TGG 0.267608 3_3:-71797734 None:intergenic
TTAACATATGTGGAAGGTTT+TGG 0.268361 3_3:-71801954 None:intergenic
CCGCAAACGCCGCGGCTTAC+CGG 0.287825 3_3:+71797213 Msa0469810:CDS
AGAATGGTTTATTGCATTGC+AGG 0.308254 3_3:+71797570 Msa0469810:CDS
GCCGCGGCGTTTGCGGTTGT+TGG 0.320837 3_3:-71797206 None:intergenic
CTCATCCTGCATTGGATGAA+TGG 0.328825 3_3:+71805909 Msa0469810:CDS
GATGTATCGGTTAGAGTTAA+TGG 0.330847 3_3:-71799824 None:intergenic
CAGGTTGAGGCAGTTCTTCT+TGG 0.331599 3_3:+71805812 Msa0469810:intron
CTGGTTTGGTGCTTGGGGAT+TGG 0.338123 3_3:+71800122 Msa0469810:CDS
CGAAGGATGCAAGCGATTAA+TGG 0.338298 3_3:+71800096 Msa0469810:CDS
TGAGATCATTGATAGGAAAA+AGG 0.339564 3_3:+71805679 Msa0469810:CDS
TGCTGTAAAGGTTGATGAAC+GGG 0.340717 3_3:+71805601 Msa0469810:intron
ACATCCTTTGTCCCAAGTTC+AGG 0.343319 3_3:-71799603 None:intergenic
ATGGTAGCTGGTTTGGTGCT+TGG 0.343553 3_3:+71800115 Msa0469810:CDS
AAATCACTTGTAAATATTGC+TGG 0.347751 3_3:+71799131 Msa0469810:CDS
GCTTCTGGTTTGGCGAAGAT+TGG 0.355340 3_3:+71797502 Msa0469810:CDS
TCTTCTTGGCAGCCCCTTTG+TGG 0.359980 3_3:+71805826 Msa0469810:CDS
AGACCATATGCTTGACCTAT+TGG 0.362678 3_3:-71801864 None:intergenic
TGAATTGATCTCACGTGAAA+TGG 0.368695 3_3:+71797384 Msa0469810:CDS
GCGATTAATGGTAGCTGGTT+TGG 0.369688 3_3:+71800108 Msa0469810:CDS
TCATCCTGCATTGGATGAAT+GGG 0.370904 3_3:+71805910 Msa0469810:CDS
GGCTGTTTCTCATCCTGCAT+TGG 0.384325 3_3:+71805901 Msa0469810:CDS
GCTGCTGTTGGAGGCTGTAT+AGG 0.394725 3_3:+71799791 Msa0469810:CDS
TGTTTGTTCAGGCTTGCTTC+CGG 0.400584 3_3:+71797692 Msa0469810:intron
AGATTCATCAACATTTGTCT+TGG 0.406370 3_3:+71800252 Msa0469810:CDS
ACAATGAACGCCTACATTGC+CGG 0.408215 3_3:+71797145 None:intergenic
CCGGTAAGCCGCGGCGTTTG+CGG 0.410043 3_3:-71797213 None:intergenic
GTGAAAATTGTTCCTGAACT+TGG 0.412273 3_3:+71799591 Msa0469810:CDS
GATTCATCAACATTTGTCTT+GGG 0.413381 3_3:+71800253 Msa0469810:CDS
AACTGCAACATCAGCTGAAA+GGG 0.414993 3_3:-71799297 None:intergenic
CCTCGTGGTGAAATAGTAAT+TGG 0.418609 3_3:+71803147 Msa0469810:CDS
GTAGTTGAATATCCACCTTC+AGG 0.419524 3_3:-71803111 None:intergenic
GGAAGCAAAGAAGGCTCGTC+TGG 0.420989 3_3:+71806650 Msa0469810:intron
TAGAATTTGTTTGCTGCTGT+TGG 0.423659 3_3:+71799779 Msa0469810:intron
AACATAATGTTGTCCACAAA+GGG 0.431416 3_3:-71805839 None:intergenic
TTCATCTTGGAGAGTATCAA+TGG 0.436487 3_3:+71797440 Msa0469810:CDS
GCCGACGTCGGCGGCGAACC+TGG 0.444746 3_3:+71797235 Msa0469810:CDS
AAAACCTTCCACATATGTTA+AGG 0.446570 3_3:+71801956 Msa0469810:CDS
GTGGTCCAAGTGTCACTCTT+GGG 0.449191 3_3:+71803169 Msa0469810:CDS
GACCCATGGACTCCTGAGAC+TGG 0.453555 3_3:+71806711 Msa0469810:CDS
AATTTGTTTGCTGCTGTTGG+AGG 0.455909 3_3:+71799782 Msa0469810:CDS
GTTACCATTTATGCTTCGTT+GGG 0.457080 3_3:+71797730 Msa0469810:CDS
TGTTACCATTTATGCTTCGT+TGG 0.470259 3_3:+71797729 Msa0469810:CDS
TCTTTGTGAGTCACCAGAAA+GGG 0.471719 3_3:-71800232 None:intergenic
TTTGTGTCATTCATTGAATG+AGG 0.476608 3_3:+71797762 Msa0469810:CDS
CCGCATCTGCTCAGCATGGA+TGG 0.477689 3_3:+71799210 Msa0469810:CDS
GCAGTAACTAGGCCAGTCTC+AGG 0.478808 3_3:-71806723 None:intergenic
GTTGCCTTGAGATCATTGAT+AGG 0.484550 3_3:+71805672 Msa0469810:CDS
TTAAATTGCTTTCTGACCCA+TGG 0.484569 3_3:+71806697 Msa0469810:CDS
GGTTCGCCGCCGACGTCGGC+CGG 0.487708 3_3:-71797232 None:intergenic
TGGTTGCGGACCGCGAAACC+AGG 0.488283 3_3:-71797253 None:intergenic
AAGTTCGAGAAGCTTCATCT+TGG 0.494487 3_3:+71797427 Msa0469810:CDS
TCTTAAGAGCTGCAGTAACT+AGG 0.495063 3_3:-71806734 None:intergenic
AGGCCAGTCTCAGGAGTCCA+TGG 0.497067 3_3:-71806714 None:intergenic
GGTAGCTGGTTTGGTGCTTG+GGG 0.497596 3_3:+71800117 Msa0469810:CDS
CCTTCCCAGAGTGAAGTTAA+CGG 0.498435 3_3:-71797289 None:intergenic
CGAACACGATCAAGAATTGC+TGG 0.500340 3_3:-71799914 None:intergenic
GAGTATCAATGGGTTACGTA+TGG 0.500959 3_3:+71797451 Msa0469810:CDS
TGCAAGCGATTAATGGTAGC+TGG 0.501413 3_3:+71800103 Msa0469810:CDS
GGTTGTTGGAGTTGCGGAAG+AGG 0.502140 3_3:-71797192 None:intergenic
AAGCCTTTCAACATCAGAAA+AGG 0.502433 3_3:-71799243 None:intergenic
TGAAAATTGTTCCTGAACTT+GGG 0.504500 3_3:+71799592 Msa0469810:CDS
CGCGGCTTACCGGCCGACGT+CGG 0.506121 3_3:+71797223 Msa0469810:CDS
GAAATGGAAACTTCTTCTGA+TGG 0.507585 3_3:+71797400 Msa0469810:CDS
GGTGGTCCAAGTGTCACTCT+TGG 0.507960 3_3:+71803168 Msa0469810:CDS
AAGTTACTGTGTGGCACTTG+TGG 0.512481 3_3:+71805880 Msa0469810:CDS
AATAACTACCTTAACATATG+TGG 0.514991 3_3:-71801964 None:intergenic
GGCTTACCGGCCGACGTCGG+CGG 0.515433 3_3:+71797226 Msa0469810:CDS
CATCTCCGTTAACTTCACTC+TGG 0.517195 3_3:+71797284 Msa0469810:CDS
GAGATGTGACGCGGTGGTTG+CGG 0.517808 3_3:-71797267 None:intergenic
TACGACCACCCAGAATTGCT+TGG 0.517811 3_3:-71800182 None:intergenic
AGGTTGATGAACGGGGAATG+AGG 0.520598 3_3:+71805609 Msa0469810:intron
TGAGCAGATGCGGCATCAGA+TGG 0.520910 3_3:-71799200 None:intergenic
CGGCGGCGAACCTGGTTTCG+CGG 0.524349 3_3:+71797243 Msa0469810:CDS
TGTTCCTGAACTTGGGACAA+AGG 0.527275 3_3:+71799599 Msa0469810:CDS
AATTCAAGAATATGAGCCAT+TGG 0.527773 3_3:-71799642 None:intergenic
GCATGGAGAATATGTGTCCC+TGG 0.530319 3_3:+71805718 Msa0469810:CDS
GCTCCAATAGGTCAAGCATA+TGG 0.531681 3_3:+71801861 Msa0469810:CDS
AACGATGAGGCCGGCAATGT+AGG 0.531894 3_3:-71797155 None:intergenic
AGGGGTAAATCAGCCTCGAT+AGG 0.532424 3_3:-71799278 None:intergenic
CGTGCATGCATACCTTTCCC+AGG 0.533958 3_3:-71805736 None:intergenic
CGCTTGCATCCTTCGTGCAT+AGG 0.534962 3_3:-71800088 None:intergenic
GTCATACAGGTAAATGCAAA+GGG 0.535324 3_3:+71800036 Msa0469810:intron
CGACGTCGGCCGGTAAGCCG+CGG 0.536999 3_3:-71797222 None:intergenic
ATATTTGCAGGAAGCAAAGA+AGG 0.537806 3_3:+71806641 Msa0469810:intron
ATCTTTGTGAGTCACCAGAA+AGG 0.538336 3_3:-71800233 None:intergenic
ATGCTGACACTAGAGAAGAA+TGG 0.546458 3_3:+71797554 Msa0469810:CDS
TAACTGCAACATCAGCTGAA+AGG 0.546955 3_3:-71799298 None:intergenic
ATTCTTGATCGTGTTCGTGA+TGG 0.547019 3_3:+71799920 Msa0469810:CDS
ATGTACACAAGTGGAAGTAC+AGG 0.547355 3_3:+71799323 Msa0469810:CDS
CAAGTGATTTCAATTCTTTG+CGG 0.548594 3_3:-71799118 None:intergenic
GAAGCCCATTCATCCAATGC+AGG 0.549662 3_3:-71805914 None:intergenic
ACCAGGTTCGCCGCCGACGT+CGG 0.550810 3_3:-71797236 None:intergenic
CAGTTAATCGACTGGCCTGA+AGG 0.550964 3_3:+71803096 Msa0469810:intron
GGTGCATGCATCACTTGTAA+AGG 0.552621 3_3:+71806000 Msa0469810:CDS
AGTATCAATGGGTTACGTAT+GGG 0.553654 3_3:+71797452 Msa0469810:CDS
CCATCCATGCTGAGCAGATG+CGG 0.554020 3_3:-71799210 None:intergenic
TCATCTTGGAGAGTATCAAT+GGG 0.554276 3_3:+71797441 Msa0469810:CDS
CAACATAATGTTGTCCACAA+AGG 0.555949 3_3:-71805840 None:intergenic
GATGAATGGGCTTCAAAGCA+AGG 0.558170 3_3:+71805923 Msa0469810:CDS
CTCACGGAGACTTGTGCTGG+TGG 0.563040 3_3:+71801885 Msa0469810:CDS
GTTGGAGGCTGTATAGGATA+CGG 0.563483 3_3:+71799797 Msa0469810:CDS
TTGCTGTAAAGGTTGATGAA+CGG 0.570020 3_3:+71805600 Msa0469810:intron
ACTATTTCACCACGAGGCAT+CGG 0.570238 3_3:-71803141 None:intergenic
GACGAGAGGAACGATGAGGC+CGG 0.570309 3_3:-71797164 None:intergenic
ATCTCCGTTAACTTCACTCT+GGG 0.571471 3_3:+71797285 Msa0469810:CDS
GATACTTCTGTTGGCCGTGT+AGG 0.572271 3_3:+71801927 Msa0469810:CDS
GTAGGTAGATTTCATGCGGA+TGG 0.573162 3_3:+71805650 Msa0469810:CDS
AGAATATGTGTCCCTGGGAA+AGG 0.579752 3_3:+71805724 Msa0469810:CDS
CAACACGTTCTTCTCTAACA+TGG 0.583970 3_3:-71797525 None:intergenic
CGTGGTGAAATAGTAATTGG+TGG 0.584455 3_3:+71803150 Msa0469810:CDS
GGTCTCACGGAGACTTGTGC+TGG 0.586067 3_3:+71801882 Msa0469810:CDS
GGGGTAAATCAGCCTCGATA+GGG 0.587669 3_3:-71799277 None:intergenic
GGTCATACAGGTAAATGCAA+AGG 0.587700 3_3:+71800035 Msa0469810:intron
GTTTGCGGTTGTTGGAGTTG+CGG 0.591559 3_3:-71797198 None:intergenic
TGGAAGTACAGGCTTGCCTA+AGG 0.592424 3_3:+71799334 Msa0469810:CDS
TGTTGGAGTTGCGGAAGAGG+AGG 0.592784 3_3:-71797189 None:intergenic
TAACAACAGTCACATTTCTC+CGG 0.594139 3_3:-71797711 None:intergenic
CATGGAGAATATGTGTCCCT+GGG 0.602792 3_3:+71805719 Msa0469810:CDS
GAGCAGATGCGGCATCAGAT+GGG 0.603021 3_3:-71799199 None:intergenic
GACATAGTTAAACTGCAGCA+TGG 0.605290 3_3:+71805701 Msa0469810:CDS
TTAATCGACTGGCCTGAAGG+TGG 0.607384 3_3:+71803099 Msa0469810:CDS
GAGGTTACAACTGTGATTTG+TGG 0.608937 3_3:+71799095 Msa0469810:CDS
CCGTTAACTTCACTCTGGGA+AGG 0.609584 3_3:+71797289 Msa0469810:CDS
GCAGTTATAATGTACACAAG+TGG 0.611172 3_3:+71799314 Msa0469810:CDS
CAAAGAAGAAACAGTGAAGG+AGG 0.611493 3_3:+71805979 Msa0469810:CDS
AAATACCCAAGAGTGACACT+TGG 0.612420 3_3:-71803174 None:intergenic
AGGTCAAGCATATGGTCTCA+CGG 0.613030 3_3:+71801869 Msa0469810:CDS
TGCATTGATGCCAACTGTGT+TGG 0.613469 3_3:+71799883 Msa0469810:CDS
GGCCAGTCTCAGGAGTCCAT+GGG 0.614285 3_3:-71806713 None:intergenic
TGCAAAGGGAGGATTATCAA+AGG 0.615510 3_3:+71800050 Msa0469810:CDS
TCAATGGGTTACGTATGGGA+AGG 0.616385 3_3:+71797456 Msa0469810:CDS
GGAATGAGGTGGTTCTACAC+TGG 0.617625 3_3:+71805623 Msa0469810:CDS
ACTACCTTAACATATGTGGA+AGG 0.619062 3_3:-71801960 None:intergenic
GGTACAGCTACCAACACAGT+TGG 0.622382 3_3:-71799893 None:intergenic
TCACGGAGACTTGTGCTGGT+GGG 0.623476 3_3:+71801886 Msa0469810:CDS
CACAGTTGGCATCAATGCAG+TGG 0.624128 3_3:-71799879 None:intergenic
ATATCTAGCATACTTACCAA+TGG 0.624262 3_3:+71799626 Msa0469810:CDS
GATGCCGCATCTGCTCAGCA+TGG 0.624263 3_3:+71799206 Msa0469810:CDS
TATTCTTGAATTAATAGCTG+AGG 0.625070 3_3:+71799653 Msa0469810:CDS
AAAGACAAGAGAGTCTTACA+AGG 0.625891 3_3:+71803209 Msa0469810:CDS
GCTGTAAAGGTTGATGAACG+GGG 0.640469 3_3:+71805602 Msa0469810:intron
TCCAACAACCGCAAACGCCG+CGG 0.640799 3_3:+71797205 Msa0469810:CDS
CAGCAAAGAAGAAACAGTGA+AGG 0.640861 3_3:+71805976 Msa0469810:CDS
CTTTGTGAGTCACCAGAAAG+GGG 0.655656 3_3:-71800231 None:intergenic
AATCATGATAGATTGTTACT+CGG 0.656134 3_3:+71797355 Msa0469810:CDS
TCTAACCGATACATCAAACA+AGG 0.656429 3_3:+71799832 Msa0469810:CDS
TTGATTTAGCCTATGCACGA+AGG 0.657974 3_3:+71800079 Msa0469810:CDS
ACTGCAACATCAGCTGAAAG+GGG 0.666737 3_3:-71799296 None:intergenic
GTGCATGCATACCTTTCCCA+GGG 0.668654 3_3:-71805735 None:intergenic
TGGTAGAGAAAACCCTATCG+AGG 0.672136 3_3:+71799265 Msa0469810:CDS
GGAAGGCGTGACGACACTCG+CGG 0.672398 3_3:+71797306 Msa0469810:CDS
CGGAAGAGGAGGATGACGAG+AGG 0.672962 3_3:-71797178 None:intergenic
TGGTTCTACACTGGTGACGT+AGG 0.683274 3_3:+71805632 Msa0469810:CDS
CCAATTACTATTTCACCACG+AGG 0.684364 3_3:-71803147 None:intergenic
TGACGTAGGTAGATTTCATG+CGG 0.690923 3_3:+71805646 Msa0469810:CDS
GGACAACATTATGTTGCATG+CGG 0.691477 3_3:+71805847 Msa0469810:CDS
CAGGGTGTGATGATGACACA+TGG 0.701230 3_3:+71799540 Msa0469810:intron
ACTGACTCACCGATGCCTCG+TGG 0.702074 3_3:+71803132 Msa0469810:CDS
ATACAGGTAAATGCAAAGGG+AGG 0.708230 3_3:+71800039 Msa0469810:intron
ACATAATGTTGTCCACAAAG+GGG 0.710014 3_3:-71805838 None:intergenic
TTGATGAACGGGGAATGAGG+TGG 0.714142 3_3:+71805612 Msa0469810:CDS
GGATGACGAGAGGAACGATG+AGG 0.715004 3_3:-71797168 None:intergenic
TTAACGGAGATGTGACGCGG+TGG 0.729075 3_3:-71797273 None:intergenic
AAGTTAACGGAGATGTGACG+CGG 0.733202 3_3:-71797276 None:intergenic
AAGGTCCAAGCAATTCTGGG+TGG 0.739493 3_3:+71800177 Msa0469810:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATAATAAATAAATTT+AGG - chr3_3:71802299-71802318 None:intergenic 0.0%
!!! AATCTTTGTTATAAAAATTT+TGG + chr3_3:71798291-71798310 Msa0469810:intron 10.0%
!!! CATTTTGAAAATAATTTTTA+TGG + chr3_3:71798504-71798523 Msa0469810:intron 10.0%
!! TTATAAAAATAAAAAGAGAA+AGG - chr3_3:71798714-71798733 None:intergenic 10.0%
!!! TCCTTTTTAATAATAAAATA+AGG + chr3_3:71800289-71800308 Msa0469810:intron 10.0%
!! GAATATAAGTAAAAAAATAA+AGG - chr3_3:71800334-71800353 None:intergenic 10.0%
!! AGAAAAAAATAATAATATGT+GGG - chr3_3:71801803-71801822 None:intergenic 10.0%
!! AAGAAAAAAATAATAATATG+TGG - chr3_3:71801804-71801823 None:intergenic 10.0%
!! TATTAGGAAAAAAAAATATT+AGG - chr3_3:71802834-71802853 None:intergenic 10.0%
!! TAATAACAAATAACAATAAA+TGG - chr3_3:71803674-71803693 None:intergenic 10.0%
!!! TCATTTTATTTATTCTATTT+TGG + chr3_3:71803696-71803715 Msa0469810:intron 10.0%
!!! CATTTTATTTATTCTATTTT+GGG + chr3_3:71803697-71803716 Msa0469810:intron 10.0%
!!! TCATAATTATGTTTTTTTTT+TGG + chr3_3:71803992-71804011 Msa0469810:intron 10.0%
!!! CATAATTATGTTTTTTTTTT+GGG + chr3_3:71803993-71804012 Msa0469810:intron 10.0%
!!! ATATAATTAGGATACTTTTA+GGG - chr3_3:71797929-71797948 None:intergenic 15.0%
!!! TATATAATTAGGATACTTTT+AGG - chr3_3:71797930-71797949 None:intergenic 15.0%
!!! TGTATAAAAAAGTATTTTAC+TGG + chr3_3:71797955-71797974 Msa0469810:intron 15.0%
!! TTTAAATTCAAGATATGATA+TGG - chr3_3:71798330-71798349 None:intergenic 15.0%
!!! GCCTTATTTTATTATTAAAA+AGG - chr3_3:71800293-71800312 None:intergenic 15.0%
!! AAAAATAAAGAAATACCATT+AGG + chr3_3:71800397-71800416 Msa0469810:intron 15.0%
!! AAAATAAAGAAATACCATTA+GGG + chr3_3:71800398-71800417 Msa0469810:intron 15.0%
!!! AACTTAACTTACTTTAATTT+GGG - chr3_3:71800948-71800967 None:intergenic 15.0%
!! AAACTTAACTTACTTTAATT+TGG - chr3_3:71800949-71800968 None:intergenic 15.0%
!!! TAAAGTAAGTTAAGTTTTTT+CGG + chr3_3:71800952-71800971 Msa0469810:intron 15.0%
!!! TTCATTTTTTTTTTTTCAGA+AGG - chr3_3:71801678-71801697 None:intergenic 15.0%
!! TTGAATAAAACATTATTTGA+TGG - chr3_3:71802497-71802516 None:intergenic 15.0%
!!! TTTATTATTTTTGTTGAAGA+TGG - chr3_3:71802730-71802749 None:intergenic 15.0%
!! AAGAAAAAGAAGAATAAAAA+AGG - chr3_3:71803249-71803268 None:intergenic 15.0%
!!! TTGGATTGTTTATTTTATTT+AGG + chr3_3:71803617-71803636 Msa0469810:intron 15.0%
!!! TATTTAGGCTTTTAATTTTT+AGG + chr3_3:71803632-71803651 Msa0469810:intron 15.0%
!!! TTGGATTGTTTATTTTATTT+AGG + chr3_3:71803617-71803636 Msa0469810:intron 15.0%
!!! TATGACATTTTATTCTATTT+TGG + chr3_3:71804042-71804061 Msa0469810:intron 15.0%
!!! ATGACATTTTATTCTATTTT+GGG + chr3_3:71804043-71804062 Msa0469810:intron 15.0%
!!! TAATAATTGAAGGATAATTT+TGG - chr3_3:71804246-71804265 None:intergenic 15.0%
!!! AATCTTTGATATCAAATTTT+AGG - chr3_3:71804643-71804662 None:intergenic 15.0%
!!! ATTTAATTAAATTAGTCTTC+AGG - chr3_3:71805791-71805810 None:intergenic 15.0%
!! AGACTAATTTAATTAAATAC+AGG + chr3_3:71805793-71805812 Msa0469810:intron 15.0%
!!! ACTTTTTTTGTTATTAGAAA+AGG + chr3_3:71806079-71806098 Msa0469810:intron 15.0%
!! AACAGTAAAATTTAAACTTA+AGG + chr3_3:71806119-71806138 Msa0469810:intron 15.0%
!!! ATTTTTATGAAAATATTTGC+AGG + chr3_3:71806629-71806648 Msa0469810:intron 15.0%
!!! TTTTGAAATTTGAACTTAGA+TGG + chr3_3:71797641-71797660 Msa0469810:intron 20.0%
!!! TACATTTTTTTTGTTTGTTC+AGG + chr3_3:71797681-71797700 Msa0469810:intron 20.0%
!!! AAAATTTTGGTAACGTATAT+AGG + chr3_3:71798304-71798323 Msa0469810:intron 20.0%
!!! ATTTTCAAAATGACATGAAA+GGG - chr3_3:71798496-71798515 None:intergenic 20.0%
!!! TATTTTCAAAATGACATGAA+AGG - chr3_3:71798497-71798516 None:intergenic 20.0%
!!! AAGTTTTAAAGTTTATTTGC+CGG + chr3_3:71798789-71798808 Msa0469810:intron 20.0%
!!! TACTTTTAGATTTGTGTTTA+TGG + chr3_3:71798937-71798956 Msa0469810:intron 20.0%
!!! ACTTTTAGATTTGTGTTTAT+GGG + chr3_3:71798938-71798957 Msa0469810:intron 20.0%
!! ACAGTAAAATGAAGAAAAAA+AGG - chr3_3:71799496-71799515 None:intergenic 20.0%
!! ATAAGGCTAAAAATATTCTT+TGG + chr3_3:71800306-71800325 Msa0469810:intron 20.0%
!! TAAGGCTAAAAATATTCTTT+GGG + chr3_3:71800307-71800326 Msa0469810:intron 20.0%
!! TTCATAGTCTAAACTTTAAA+AGG - chr3_3:71800644-71800663 None:intergenic 20.0%
!!! TTTTATACGTTAGAATTTCT+TGG - chr3_3:71800912-71800931 None:intergenic 20.0%
!!! AACTTCTGAGTTTTATATTT+TGG - chr3_3:71800993-71801012 None:intergenic 20.0%
!!! TTTTTTTTAAAGGAGCAAAA+TGG + chr3_3:71801232-71801251 Msa0469810:intron 20.0%
!! ATAATAAATCTCACTTTCTA+TGG + chr3_3:71801597-71801616 Msa0469810:intron 20.0%
!! TAATAAATCTCACTTTCTAT+GGG + chr3_3:71801598-71801617 Msa0469810:intron 20.0%
!! AAAAAAAATGAAATTCACTC+AGG + chr3_3:71801686-71801705 Msa0469810:intron 20.0%
!! AAAAAATAATAATATGTGGG+TGG - chr3_3:71801800-71801819 None:intergenic 20.0%
!!! ATTCACACATTTTAAATTCA+AGG + chr3_3:71801999-71802018 Msa0469810:intron 20.0%
!!! TTCACACATTTTAAATTCAA+GGG + chr3_3:71802000-71802019 Msa0469810:intron 20.0%
!!! AAGTTCATGGAATATTTTTA+GGG - chr3_3:71802185-71802204 None:intergenic 20.0%
!!! TAAGTTCATGGAATATTTTT+AGG - chr3_3:71802186-71802205 None:intergenic 20.0%
!! AATAAATAAATTTAGGAACC+AGG - chr3_3:71802292-71802311 None:intergenic 20.0%
!! ATTAATCCTCAACTTATATA+TGG + chr3_3:71802424-71802443 Msa0469810:intron 20.0%
!! TTAATCCTCAACTTATATAT+GGG + chr3_3:71802425-71802444 Msa0469810:intron 20.0%
!! AGAAAATAAGTGATAGAAAT+GGG + chr3_3:71802521-71802540 Msa0469810:intron 20.0%
!!! ATAATATTGTTGTCTCTTTT+TGG - chr3_3:71802560-71802579 None:intergenic 20.0%
!!! TATTATTTGTCACTCATTTT+GGG - chr3_3:71802902-71802921 None:intergenic 20.0%
!!! TTTTATTCTTCTTTTTCTTG+TGG + chr3_3:71803250-71803269 Msa0469810:intron 20.0%
!!! TTGAATTTTAACACAATGTT+AGG + chr3_3:71803826-71803845 Msa0469810:intron 20.0%
!! ATAATAAACCTATCACATTA+AGG - chr3_3:71803904-71803923 None:intergenic 20.0%
!!! GGTTTATTATTTAGAACATT+TGG + chr3_3:71803914-71803933 Msa0469810:intron 20.0%
!!! GAATGTTTTACATCTATAAA+TGG + chr3_3:71804111-71804130 Msa0469810:intron 20.0%
!! ATTTCTCTCTTAATAATTGA+AGG - chr3_3:71804256-71804275 None:intergenic 20.0%
!! ATTATTAAGAGAGAAATGAT+TGG + chr3_3:71804259-71804278 Msa0469810:intron 20.0%
!! TTAATTATCTTCATCTAATC+CGG + chr3_3:71804286-71804305 Msa0469810:intron 20.0%
!!! CAAAGAAATATTGGAATTTT+TGG - chr3_3:71804753-71804772 None:intergenic 20.0%
!! AAAAAGAAGCAAAGAAATAT+TGG - chr3_3:71804762-71804781 None:intergenic 20.0%
!!! ATAATTTTCTCATTTCCAAT+AGG - chr3_3:71804787-71804806 None:intergenic 20.0%
!! TGGAAATGAGAAAATTATTA+CGG + chr3_3:71804789-71804808 Msa0469810:intron 20.0%
!! TTATAAATTCATATGTTGCA+TGG + chr3_3:71804852-71804871 Msa0469810:intron 20.0%
!! TTCACATATAAATACTCTTT+AGG + chr3_3:71805152-71805171 Msa0469810:intron 20.0%
!!! AATCAAGAATAATCTCATTT+TGG - chr3_3:71805453-71805472 None:intergenic 20.0%
!! ATTTAATTAAATACAGGTTG+AGG + chr3_3:71805799-71805818 Msa0469810:intron 20.0%
!!! TAAACGGATTTTAATACAAA+AGG - chr3_3:71806030-71806049 None:intergenic 20.0%
!!! TAAAAAGTACAAAATTGACT+AGG - chr3_3:71806149-71806168 None:intergenic 20.0%
!!! GTCAATTTTGTACTTTTTAT+CGG + chr3_3:71806150-71806169 Msa0469810:intron 20.0%
!! GTCAAACAAATATAATCTTA+GGG - chr3_3:71806193-71806212 None:intergenic 20.0%
!! AGTCAAACAAATATAATCTT+AGG - chr3_3:71806194-71806213 None:intergenic 20.0%
! AATCATGATAGATTGTTACT+CGG + chr3_3:71797355-71797374 Msa0469810:CDS 25.0%
!! ATTGTTGTGTGCAAAATTTT+AGG + chr3_3:71797816-71797835 Msa0469810:intron 25.0%
! TAAAGATATACATATCCTAC+TGG + chr3_3:71798419-71798438 Msa0469810:intron 25.0%
! TAACAAGTGATATTGTTCAT+AGG + chr3_3:71798619-71798638 Msa0469810:intron 25.0%
!!! AGAACTTGTTAAAGAGAAAA+TGG - chr3_3:71798668-71798687 None:intergenic 25.0%
! AAAGTCAATTCTATTTCACA+TGG + chr3_3:71798816-71798835 Msa0469810:intron 25.0%
! CAATACTACTAGAAATTTAC+AGG - chr3_3:71798853-71798872 None:intergenic 25.0%
! GAACTAAATTACTAAAACGA+TGG - chr3_3:71798998-71799017 None:intergenic 25.0%
! AAATCACTTGTAAATATTGC+TGG + chr3_3:71799131-71799150 Msa0469810:CDS 25.0%
!! GAGATATATTGTTATTCTAG+TGG + chr3_3:71799371-71799390 Msa0469810:intron 25.0%
! TATTCTTGAATTAATAGCTG+AGG + chr3_3:71799653-71799672 Msa0469810:CDS 25.0%
!!! TTTTACCTTGTTTGATGTAT+CGG - chr3_3:71799840-71799859 None:intergenic 25.0%
! TACATCAAACAAGGTAAAAA+AGG + chr3_3:71799841-71799860 Msa0469810:CDS 25.0%
! ACATCAAACAAGGTAAAAAA+GGG + chr3_3:71799842-71799861 Msa0469810:CDS 25.0%
!! GAATTTTCTTGTCTTCAAAA+AGG + chr3_3:71800158-71800177 Msa0469810:CDS 25.0%
!!! ATATGCTTTTAGCTTTTAGA+AGG - chr3_3:71800369-71800388 None:intergenic 25.0%
!! TTTTCTTCCAGTAGTATATA+AGG + chr3_3:71800482-71800501 Msa0469810:intron 25.0%
! CAACTCATGGTTAATTTATA+GGG - chr3_3:71800578-71800597 None:intergenic 25.0%
! TCAACTCATGGTTAATTTAT+AGG - chr3_3:71800579-71800598 None:intergenic 25.0%
!!! TTGTTCTTTTGATGATGAAT+CGG + chr3_3:71800732-71800751 Msa0469810:intron 25.0%
! CAAAATAAACAGAAGTTCAT+AGG + chr3_3:71801149-71801168 Msa0469810:intron 25.0%
!!! AGCCACATGTTTTTTTTTAA+AGG + chr3_3:71801222-71801241 Msa0469810:intron 25.0%
!! CTCCTTTAAAAAAAAACATG+TGG - chr3_3:71801227-71801246 None:intergenic 25.0%
!!! TCCTTTAAGATTGTTTTTAC+CGG - chr3_3:71801313-71801332 None:intergenic 25.0%
! CAAACAAGCTAAAGTAAATA+TGG - chr3_3:71801412-71801431 None:intergenic 25.0%
! TTGTACAAAATTGAATTCCT+TGG - chr3_3:71801456-71801475 None:intergenic 25.0%
! ATTATATGTTCAACTCTTGA+TGG + chr3_3:71801565-71801584 Msa0469810:intron 25.0%
! AATAACTACCTTAACATATG+TGG - chr3_3:71801967-71801986 None:intergenic 25.0%
!! GAATTTAAAATGTGTGAATG+TGG - chr3_3:71801998-71802017 None:intergenic 25.0%
!!! CTTTTACTTTTGCTGTTTAT+CGG + chr3_3:71802067-71802086 Msa0469810:intron 25.0%
! TCACAGTACTTAAATAGATA+TGG + chr3_3:71802092-71802111 Msa0469810:intron 25.0%
!!! AGTTCATGGAATATTTTTAG+GGG - chr3_3:71802184-71802203 None:intergenic 25.0%
! GGATTAATGATCACAATATA+TGG - chr3_3:71802412-71802431 None:intergenic 25.0%
! GAGAAAATAAGTGATAGAAA+TGG + chr3_3:71802520-71802539 Msa0469810:intron 25.0%
!! CTATTATTTGTCACTCATTT+TGG - chr3_3:71802903-71802922 None:intergenic 25.0%
!!! AGAGTGTATTATTTCTGAAA+TGG + chr3_3:71802951-71802970 Msa0469810:intron 25.0%
!!! GAGTGTATTATTTCTGAAAT+GGG + chr3_3:71802952-71802971 Msa0469810:intron 25.0%
! AAGGTTTAGAGATGATAATA+TGG + chr3_3:71803008-71803027 Msa0469810:intron 25.0%
!! CATAAGAAATCTTTTTCCAA+AGG - chr3_3:71803054-71803073 None:intergenic 25.0%
! TCGAATATTAACACAATGTT+AGG + chr3_3:71803483-71803502 Msa0469810:intron 25.0%
!!! TGGTTTTATATCTAACAACT+GGG - chr3_3:71803530-71803549 None:intergenic 25.0%
!!! ATGGTTTTATATCTAACAAC+TGG - chr3_3:71803531-71803550 None:intergenic 25.0%
!!! GGTTTATGTTTTAGAACATT+TGG + chr3_3:71803571-71803590 Msa0469810:intron 25.0%
!! GACTGTTTTACATCTATAAA+TGG + chr3_3:71803765-71803784 Msa0469810:intron 25.0%
!!! TGGTTTTATATCTAACAACT+GGG - chr3_3:71803530-71803549 None:intergenic 25.0%
!!! ATGGTTTTATATCTAACAAC+TGG - chr3_3:71803531-71803550 None:intergenic 25.0%
! TAATTATCTTCATCTAATCC+GGG + chr3_3:71804287-71804306 Msa0469810:intron 25.0%
!! ATCTTTTTACAAAAGTAACC+CGG - chr3_3:71804308-71804327 None:intergenic 25.0%
!! TAGTTTGAAAAGAGTCTTAT+AGG + chr3_3:71804343-71804362 Msa0469810:intron 25.0%
!! AGTTTGAAAAGAGTCTTATA+GGG + chr3_3:71804344-71804363 Msa0469810:intron 25.0%
! TTTATATCAATCAACTATCC+AGG + chr3_3:71804532-71804551 Msa0469810:intron 25.0%
! TTATATCAATCAACTATCCA+GGG + chr3_3:71804533-71804552 Msa0469810:intron 25.0%
! TTATGACATTTCTTTGATTG+TGG - chr3_3:71804602-71804621 None:intergenic 25.0%
! TCTAGATGAGTATAGTATTT+GGG + chr3_3:71804829-71804848 Msa0469810:intron 25.0%
!!! CGAGATTTTTAGAAAAACTA+AGG + chr3_3:71804909-71804928 Msa0469810:intron 25.0%
!!! TTTTTAGAAAAACTAAGGCA+TGG + chr3_3:71804914-71804933 Msa0469810:intron 25.0%
!!! TTTTAGAAAAACTAAGGCAT+GGG + chr3_3:71804915-71804934 Msa0469810:intron 25.0%
! AGTATTTATATGTGAAGCAT+GGG - chr3_3:71805148-71805167 None:intergenic 25.0%
! ATGATTATCAAACTCTACAT+AGG + chr3_3:71805518-71805537 Msa0469810:intron 25.0%
! TGATTATCAAACTCTACATA+GGG + chr3_3:71805519-71805538 Msa0469810:intron 25.0%
!!! TTTTGCATTTTTTGCTGTAA+AGG + chr3_3:71805589-71805608 Msa0469810:intron 25.0%
!!! CATTACAACAAAGTTCTAAA+CGG - chr3_3:71806046-71806065 None:intergenic 25.0%
!!! GAACTTTGTTGTAATGTTTT+AGG + chr3_3:71806050-71806069 Msa0469810:intron 25.0%
! TTTGTTTGACTGTTAGAAAA+TGG + chr3_3:71806203-71806222 Msa0469810:intron 25.0%
! TTGTTTGACTGTTAGAAAAT+GGG + chr3_3:71806204-71806223 Msa0469810:intron 25.0%
! TTGCTTTGCATTAAAATATG+TGG + chr3_3:71806262-71806281 Msa0469810:intron 25.0%
! TGCTTTGCATTAAAATATGT+GGG + chr3_3:71806263-71806282 Msa0469810:intron 25.0%
!! TGATTTTTCATTCAAAAGCT+TGG + chr3_3:71806371-71806390 Msa0469810:intron 25.0%
! AAAGTGGAATACATGAAATA+GGG - chr3_3:71806409-71806428 None:intergenic 25.0%
! AAAAGTGGAATACATGAAAT+AGG - chr3_3:71806410-71806429 None:intergenic 25.0%
! TGATCATTAACTTAGTATAG+CGG + chr3_3:71806442-71806461 Msa0469810:intron 25.0%
! TTTGTGTCATTCATTGAATG+AGG + chr3_3:71797762-71797781 Msa0469810:CDS 30.0%
! CACACAACAATTTTCTGTTT+GGG - chr3_3:71797807-71797826 None:intergenic 30.0%
! ACAGATACGTTTAGAGTATT+CGG - chr3_3:71797867-71797886 None:intergenic 30.0%
TACTCTAAACGTATCTGTAT+TGG + chr3_3:71797869-71797888 Msa0469810:intron 30.0%
GATACATATCAGATACTTCA+AGG + chr3_3:71797977-71797996 Msa0469810:intron 30.0%
CATATCTAGCATACATATCT+TGG + chr3_3:71798013-71798032 Msa0469810:intron 30.0%
GGATATATGTGAGAAATTAG+TGG + chr3_3:71798034-71798053 Msa0469810:intron 30.0%
!!! TATGATATGTTTTGATCGCA+AGG + chr3_3:71798198-71798217 Msa0469810:intron 30.0%
ATATACATATCCTACTGGTA+TGG + chr3_3:71798424-71798443 Msa0469810:intron 30.0%
TCATATTATGCCATCTAATG+AGG - chr3_3:71798533-71798552 None:intergenic 30.0%
GATGGCATAATATGAATGAT+CGG + chr3_3:71798538-71798557 Msa0469810:intron 30.0%
ATGGAAAAGAAATAAAGCCT+CGG - chr3_3:71798649-71798668 None:intergenic 30.0%
! AATAGAATTGACTTTCTTGC+CGG - chr3_3:71798811-71798830 None:intergenic 30.0%
CAAGTGATTTCAATTCTTTG+CGG - chr3_3:71799121-71799140 None:intergenic 30.0%
! TTTCCTTTTCTGATGTTGAA+AGG + chr3_3:71799240-71799259 Msa0469810:CDS 30.0%
! TTTTCTTTCTATCCTTTCAC+AGG + chr3_3:71799398-71799417 Msa0469810:intron 30.0%
! AATCTCTTTTCTTTTGCACA+GGG + chr3_3:71799522-71799541 Msa0469810:intron 30.0%
TGAAAATTGTTCCTGAACTT+GGG + chr3_3:71799592-71799611 Msa0469810:CDS 30.0%
ATATCTAGCATACTTACCAA+TGG + chr3_3:71799626-71799645 Msa0469810:CDS 30.0%
AATTCAAGAATATGAGCCAT+TGG - chr3_3:71799645-71799664 None:intergenic 30.0%
TTTGTCAAAACATGCAAGAT+AGG - chr3_3:71799744-71799763 None:intergenic 30.0%
CATCAAACAAGGTAAAAAAG+GGG + chr3_3:71799843-71799862 Msa0469810:CDS 30.0%
! CGTATTCGTTTTATACTATG+TGG + chr3_3:71800201-71800220 Msa0469810:CDS 30.0%
! ATTCGTTTTATACTATGTGG+TGG + chr3_3:71800204-71800223 Msa0469810:CDS 30.0%
AGATTCATCAACATTTGTCT+TGG + chr3_3:71800252-71800271 Msa0469810:CDS 30.0%
GATTCATCAACATTTGTCTT+GGG + chr3_3:71800253-71800272 Msa0469810:CDS 30.0%
GAAAAGAAAACAGATTCTTC+AGG - chr3_3:71800467-71800486 None:intergenic 30.0%
AAAAATCAGTAGTCTTTGCT+TGG - chr3_3:71800536-71800555 None:intergenic 30.0%
! AAATTAACCATGAGTTGAGA+AGG + chr3_3:71800581-71800600 Msa0469810:intron 30.0%
!!! AGTTTTTTCGGTTTCTTCAT+AGG + chr3_3:71800964-71800983 Msa0469810:intron 30.0%
TGCTGTAACAGATATGTTAT+GGG - chr3_3:71801074-71801093 None:intergenic 30.0%
TTGCTGTAACAGATATGTTA+TGG - chr3_3:71801075-71801094 None:intergenic 30.0%
! TATTTTGTGAAATCACAGTG+CGG - chr3_3:71801136-71801155 None:intergenic 30.0%
AGGAAAAAATATCCTCAAAG+TGG + chr3_3:71801169-71801188 Msa0469810:intron 30.0%
!!! AAGATTGTTTTTACCGGTAT+TGG - chr3_3:71801307-71801326 None:intergenic 30.0%
ACCGGTAAAAACAATCTTAA+AGG + chr3_3:71801309-71801328 Msa0469810:intron 30.0%
!!! TCGTGGTTTTTTAAGTTTGA+CGG - chr3_3:71801351-71801370 None:intergenic 30.0%
TGATGTTTCTTTGTGAACAT+AGG - chr3_3:71801385-71801404 None:intergenic 30.0%
! TTAACATATGTGGAAGGTTT+TGG - chr3_3:71801957-71801976 None:intergenic 30.0%
AAAACCTTCCACATATGTTA+AGG + chr3_3:71801956-71801975 Msa0469810:CDS 30.0%
CAGCAAAAGTAAAAGGAAAA+AGG - chr3_3:71802062-71802081 None:intergenic 30.0%
CGATAAACAGCAAAAGTAAA+AGG - chr3_3:71802069-71802088 None:intergenic 30.0%
CATATTATCACTGCACTTAT+AGG + chr3_3:71802137-71802156 Msa0469810:intron 30.0%
!!! GTTCATGGAATATTTTTAGG+GGG - chr3_3:71802183-71802202 None:intergenic 30.0%
!! TGCAGTGCTTTCTTTTATTT+AGG + chr3_3:71802226-71802245 Msa0469810:intron 30.0%
! TTGTCAGTTATAACAGCTTT+TGG + chr3_3:71802353-71802372 Msa0469810:intron 30.0%
! TGTCAGTTATAACAGCTTTT+GGG + chr3_3:71802354-71802373 Msa0469810:intron 30.0%
TGTATCCCATATATAAGTTG+AGG - chr3_3:71802433-71802452 None:intergenic 30.0%
ACTTATATATGGGATACACA+AGG + chr3_3:71802435-71802454 Msa0469810:intron 30.0%
CTTATATATGGGATACACAA+GGG + chr3_3:71802436-71802455 Msa0469810:intron 30.0%
! ATATTGTTGTCTCTTTTTGG+AGG - chr3_3:71802557-71802576 None:intergenic 30.0%
TATTTCATTCTCCATGAGAA+GGG + chr3_3:71802639-71802658 Msa0469810:intron 30.0%
!!! AATTTTAAGGCCAAGAAGTT+GGG - chr3_3:71802764-71802783 None:intergenic 30.0%
! CAAAGTCCTGATGAATTTTA+AGG - chr3_3:71802777-71802796 None:intergenic 30.0%
!! TGTATTATTTCTGAAATGGG+AGG + chr3_3:71802955-71802974 Msa0469810:intron 30.0%
GGATGTATTTGCTTAAAAGA+AGG + chr3_3:71802989-71803008 Msa0469810:intron 30.0%
GTTTAGAGATGATAATATGG+TGG + chr3_3:71803011-71803030 Msa0469810:intron 30.0%
!! TTATTTTACCTATCTGCCTT+TGG + chr3_3:71803035-71803054 Msa0469810:intron 30.0%
GGAAAAAGATTTCTTATGCA+AGG + chr3_3:71803056-71803075 Msa0469810:intron 30.0%
AGATTTCTTATGCAAGGATT+TGG + chr3_3:71803062-71803081 Msa0469810:intron 30.0%
! ACCTAATAGCTTAAGCTTTT+AGG + chr3_3:71803372-71803391 Msa0469810:intron 30.0%
TCCTAAAAGCTTAAGCTATT+AGG - chr3_3:71803376-71803395 None:intergenic 30.0%
ATATTAACACAATGTTAGGC+AGG + chr3_3:71803487-71803506 Msa0469810:intron 30.0%
TTATATCTAACAACTGGGTA+GGG - chr3_3:71803525-71803544 None:intergenic 30.0%
TTTATATCTAACAACTGGGT+AGG - chr3_3:71803526-71803545 None:intergenic 30.0%
AAACCATTCATGAATCTTAC+CGG + chr3_3:71803544-71803563 Msa0469810:intron 30.0%
TGGGTTATCTTATTCCAATT+TGG + chr3_3:71803716-71803735 Msa0469810:intron 30.0%
GGGTTATCTTATTCCAATTT+GGG + chr3_3:71803717-71803736 Msa0469810:intron 30.0%
ATCCTTACTGTTCACTTTAA+AGG - chr3_3:71803792-71803811 None:intergenic 30.0%
! AACAGTAAGGATCTTTGAAA+CGG + chr3_3:71803800-71803819 Msa0469810:intron 30.0%
!! ATTTTAACACAATGTTAGGC+AGG + chr3_3:71803830-71803849 Msa0469810:intron 30.0%
TTATATCTAACAACTGGGTT+GGG - chr3_3:71803868-71803887 None:intergenic 30.0%
TTTATATCTAACAACTGGGT+TGG - chr3_3:71803526-71803545 None:intergenic 30.0%
ATCACATTAAGGTTCATGAA+TGG - chr3_3:71803893-71803912 None:intergenic 30.0%
TTCATGAACCTTAATGTGAT+AGG + chr3_3:71803893-71803912 Msa0469810:intron 30.0%
TGGGTTATCTTATTCCAATT+TGG + chr3_3:71803716-71803735 Msa0469810:intron 30.0%
GGGTTATCTTATTCCAATTT+GGG + chr3_3:71803717-71803736 Msa0469810:intron 30.0%
AAACTATTTGTGACCCAAAT+TGG - chr3_3:71804079-71804098 None:intergenic 30.0%
TTGGGTCACAAATAGTTTAT+TGG + chr3_3:71804081-71804100 Msa0469810:intron 30.0%
TGGGTCACAAATAGTTTATT+GGG + chr3_3:71804082-71804101 Msa0469810:intron 30.0%
! TCAAGAGGGTTTTACATATA+GGG + chr3_3:71804380-71804399 Msa0469810:intron 30.0%
AACTCAATATCATACTACCT+CGG - chr3_3:71804407-71804426 None:intergenic 30.0%
!!! GAAATATTGGAATTTTTGGC+AGG - chr3_3:71804749-71804768 None:intergenic 30.0%
! TTTGCTTCTTTTTGTCCTAT+TGG + chr3_3:71804769-71804788 Msa0469810:intron 30.0%
CTCTAGATGAGTATAGTATT+TGG + chr3_3:71804828-71804847 Msa0469810:intron 30.0%
CATCACAAATCAAAAGAGTT+AGG + chr3_3:71805014-71805033 Msa0469810:intron 30.0%
GAAATAAATATACACAGCCA+AGG + chr3_3:71805036-71805055 Msa0469810:intron 30.0%
GAGTATTTATATGTGAAGCA+TGG - chr3_3:71805149-71805168 None:intergenic 30.0%
! GTTTGAGATACACTCTAAAA+AGG - chr3_3:71805386-71805405 None:intergenic 30.0%
AAGCGTGCTACATTTATTAA+GGG + chr3_3:71805418-71805437 Msa0469810:intron 30.0%
TTTAAGTGTTTACACTACCA+AGG + chr3_3:71805477-71805496 Msa0469810:intron 30.0%
TTAAGTGTTTACACTACCAA+GGG + chr3_3:71805478-71805497 Msa0469810:intron 30.0%
! TGTAGAGTTTGATAATCATC+TGG - chr3_3:71805517-71805536 None:intergenic 30.0%
! TTTTCCTATCAATGATCTCA+AGG - chr3_3:71805679-71805698 None:intergenic 30.0%
TGAGATCATTGATAGGAAAA+AGG + chr3_3:71805679-71805698 Msa0469810:CDS 30.0%
AACATAATGTTGTCCACAAA+GGG - chr3_3:71805842-71805861 None:intergenic 30.0%
! TTCTTTTCAAAGTTACTGTG+TGG + chr3_3:71805871-71805890 Msa0469810:CDS 30.0%
TGTTTGACTGTTAGAAAATG+GGG + chr3_3:71806205-71806224 Msa0469810:intron 30.0%
CATTAAAATATGTGGGATGA+TGG + chr3_3:71806270-71806289 Msa0469810:intron 30.0%
CAAAAGAACAAAAATTCGAG+TGG - chr3_3:71806325-71806344 None:intergenic 30.0%
ATACAAATTCATAACGTACC+TGG + chr3_3:71806465-71806484 Msa0469810:intron 30.0%
!! AGCTTGTTAGTATGATAACT+TGG + chr3_3:71806513-71806532 Msa0469810:intron 30.0%
!! GAAAGCAATTTAAGTTTTGC+AGG - chr3_3:71806690-71806709 None:intergenic 30.0%
TGAATTGATCTCACGTGAAA+TGG + chr3_3:71797384-71797403 Msa0469810:CDS 35.0%
GAAATGGAAACTTCTTCTGA+TGG + chr3_3:71797400-71797419 Msa0469810:CDS 35.0%
!! TTCATCTTGGAGAGTATCAA+TGG + chr3_3:71797440-71797459 Msa0469810:CDS 35.0%
!! TCATCTTGGAGAGTATCAAT+GGG + chr3_3:71797441-71797460 Msa0469810:CDS 35.0%
!! AGTATCAATGGGTTACGTAT+GGG + chr3_3:71797452-71797471 Msa0469810:CDS 35.0%
AGAATGGTTTATTGCATTGC+AGG + chr3_3:71797570-71797589 Msa0469810:CDS 35.0%
TAACAACAGTCACATTTCTC+CGG - chr3_3:71797714-71797733 None:intergenic 35.0%
TGTTACCATTTATGCTTCGT+TGG + chr3_3:71797729-71797748 Msa0469810:CDS 35.0%
GTTACCATTTATGCTTCGTT+GGG + chr3_3:71797730-71797749 Msa0469810:CDS 35.0%
! AATTTTCTGTTTGGGAAGAG+TGG - chr3_3:71797799-71797818 None:intergenic 35.0%
! GCACACAACAATTTTCTGTT+TGG - chr3_3:71797808-71797827 None:intergenic 35.0%
ACTCATACTTTGCAGATACT+TGG + chr3_3:71797894-71797913 Msa0469810:intron 35.0%
CTCATACTTTGCAGATACTT+GGG + chr3_3:71797895-71797914 Msa0469810:intron 35.0%
TCATACTTTGCAGATACTTG+GGG + chr3_3:71797896-71797915 Msa0469810:intron 35.0%
GAAATTAGTGGAGATGTAAG+CGG + chr3_3:71798046-71798065 Msa0469810:intron 35.0%
AAATTAGTGGAGATGTAAGC+GGG + chr3_3:71798047-71798066 Msa0469810:intron 35.0%
TTTATGGACACCTCATTAGA+TGG + chr3_3:71798520-71798539 Msa0469810:intron 35.0%
!! ACTGAGTTTGCAAGTTTTGT+TGG + chr3_3:71798588-71798607 Msa0469810:intron 35.0%
!!! CTGAGTTTGCAAGTTTTGTT+GGG + chr3_3:71798589-71798608 Msa0469810:intron 35.0%
ACTGCTCAACATGTAATTTC+TGG + chr3_3:71798755-71798774 Msa0469810:intron 35.0%
CAATGCTGCTAGAAATTTAC+AGG - chr3_3:71798912-71798931 None:intergenic 35.0%
AAGCCTTTCAACATCAGAAA+AGG - chr3_3:71799246-71799265 None:intergenic 35.0%
! TTTTCTGATGTTGAAAGGCT+TGG + chr3_3:71799245-71799264 Msa0469810:CDS 35.0%
GCAGTTATAATGTACACAAG+TGG + chr3_3:71799314-71799333 Msa0469810:CDS 35.0%
TCAAAGATGCTTCTAACCTT+AGG - chr3_3:71799353-71799372 None:intergenic 35.0%
TAGACTCTAGGCTACTATTT+AGG - chr3_3:71799433-71799452 None:intergenic 35.0%
! GAATCTCTTTTCTTTTGCAC+AGG + chr3_3:71799521-71799540 Msa0469810:intron 35.0%
GTGAAAATTGTTCCTGAACT+TGG + chr3_3:71799591-71799610 Msa0469810:CDS 35.0%
CAGTAACACTTCAGCATATA+GGG + chr3_3:71799686-71799705 Msa0469810:intron 35.0%
! TAGAATTTGTTTGCTGCTGT+TGG + chr3_3:71799779-71799798 Msa0469810:intron 35.0%
!! GATGTATCGGTTAGAGTTAA+TGG - chr3_3:71799827-71799846 None:intergenic 35.0%
TCTAACCGATACATCAAACA+AGG + chr3_3:71799832-71799851 Msa0469810:CDS 35.0%
AAGGTAAAAAAGGGGACAAA+AGG + chr3_3:71799851-71799870 Msa0469810:CDS 35.0%
AGGTAAAAAAGGGGACAAAA+GGG + chr3_3:71799852-71799871 Msa0469810:CDS 35.0%
GTCATACAGGTAAATGCAAA+GGG + chr3_3:71800036-71800055 Msa0469810:intron 35.0%
AAAAAGGTCCAAGCAATTCT+GGG + chr3_3:71800174-71800193 Msa0469810:CDS 35.0%
AAATACCATTAGGGAAGAGT+AGG + chr3_3:71800407-71800426 Msa0469810:intron 35.0%
GAAGAGTAGGAGTAAAACAA+TGG + chr3_3:71800420-71800439 Msa0469810:intron 35.0%
CTTCCAGTAGTATATAAGGT+CGG + chr3_3:71800486-71800505 Msa0469810:intron 35.0%
TTCCAGTAGTATATAAGGTC+GGG + chr3_3:71800487-71800506 Msa0469810:intron 35.0%
TTAATTTATAGGGAGCTGAG+TGG - chr3_3:71800568-71800587 None:intergenic 35.0%
TCTGTCATAAGTTATGACCA+TGG + chr3_3:71800665-71800684 Msa0469810:intron 35.0%
!!! TTCTTTTGATGATGAATCGG+TGG + chr3_3:71800735-71800754 Msa0469810:intron 35.0%
ATAGCTTAAAGGACCAAATC+CGG - chr3_3:71800829-71800848 None:intergenic 35.0%
! GATTTGGTCCTTTAAGCTAT+TGG + chr3_3:71800829-71800848 Msa0469810:intron 35.0%
TGAAAGGACCAATAGCTTAA+AGG - chr3_3:71800840-71800859 None:intergenic 35.0%
GGTTTATGAAGATGATGAAG+AGG - chr3_3:71800891-71800910 None:intergenic 35.0%
AACAGATATGTTATGGGGTT+GGG - chr3_3:71801068-71801087 None:intergenic 35.0%
TAACAGATATGTTATGGGGT+TGG - chr3_3:71801069-71801088 None:intergenic 35.0%
GCTGTAACAGATATGTTATG+GGG - chr3_3:71801073-71801092 None:intergenic 35.0%
AAAGCTCATGGTCTTTCTTA+GGG - chr3_3:71801100-71801119 None:intergenic 35.0%
! AAAAAAGTGTGGAAAGCTCA+TGG - chr3_3:71801112-71801131 None:intergenic 35.0%
ATATCCTCAAAGTGGTTTAG+AGG + chr3_3:71801177-71801196 Msa0469810:intron 35.0%
ATATCCTCTAAACCACTTTG+AGG - chr3_3:71801184-71801203 None:intergenic 35.0%
!!! TGCGCATTTTGAGACTTAAA+AGG + chr3_3:71801280-71801299 Msa0469810:intron 35.0%
AGACTTAAAAGGACCAATAC+CGG + chr3_3:71801291-71801310 Msa0469810:intron 35.0%
ACAATCTTAAAGGACCAATC+TGG + chr3_3:71801319-71801338 Msa0469810:intron 35.0%
!!! TTTGACGGTTTTTTCCAGAT+TGG - chr3_3:71801336-71801355 None:intergenic 35.0%
AAATGAAATTCACTCAGGAC+TGG + chr3_3:71801691-71801710 Msa0469810:intron 35.0%
!! GATTTTGACGATACTTCTGT+TGG + chr3_3:71801918-71801937 Msa0469810:CDS 35.0%
ACTACCTTAACATATGTGGA+AGG - chr3_3:71801963-71801982 None:intergenic 35.0%
ATATTCCATGAACTTACACC+TGG + chr3_3:71802190-71802209 Msa0469810:intron 35.0%
GATGGCTGAGTAAATTCTTT+GGG - chr3_3:71802479-71802498 None:intergenic 35.0%
TGATGGCTGAGTAAATTCTT+TGG - chr3_3:71802480-71802499 None:intergenic 35.0%
TGGAGAATGAAATAGGATTC+AGG - chr3_3:71802633-71802652 None:intergenic 35.0%
CTTCTCATGGAGAATGAAAT+AGG - chr3_3:71802640-71802659 None:intergenic 35.0%
CTATTTCATTCTCCATGAGA+AGG + chr3_3:71802638-71802657 Msa0469810:intron 35.0%
TTGTTGATCCAATTGCTTTG+TGG - chr3_3:71802665-71802684 None:intergenic 35.0%
!!! GAATTTTAAGGCCAAGAAGT+TGG - chr3_3:71802765-71802784 None:intergenic 35.0%
!! TCTTGGCCTTAAAATTCATC+AGG + chr3_3:71802768-71802787 Msa0469810:intron 35.0%
! ATGTGGAATTTTCTGTATGC+AGG + chr3_3:71802800-71802819 Msa0469810:intron 35.0%
! TCTGAAATGGGAGGAATATA+CGG + chr3_3:71802964-71802983 Msa0469810:intron 35.0%
! ATCTTTTTCCAAAGGCAGAT+AGG - chr3_3:71803046-71803065 None:intergenic 35.0%
! TCTTTTCTCAGTTAATCGAC+TGG + chr3_3:71803088-71803107 Msa0469810:intron 35.0%
AAAGACAAGAGAGTCTTACA+AGG + chr3_3:71803209-71803228 Msa0469810:CDS 35.0%
! TCTTTTTCTTGTGGAGCAAA+AGG + chr3_3:71803259-71803278 Msa0469810:intron 35.0%
CACAAGAACTAACAAAGCAA+TGG - chr3_3:71803325-71803344 None:intergenic 35.0%
ACTTTCGTTTCAAAGAACAG+AGG - chr3_3:71803464-71803483 None:intergenic 35.0%
AACCATTCATGAATCTTACC+GGG + chr3_3:71803545-71803564 Msa0469810:intron 35.0%
! TCTAAAACATAAACCTGTCC+CGG - chr3_3:71803566-71803585 None:intergenic 35.0%
AAACTATTCGTGTCCCAAAT+TGG - chr3_3:71803733-71803752 None:intergenic 35.0%
TTGGGACACGAATAGTTTAT+TGG + chr3_3:71803735-71803754 Msa0469810:intron 35.0%
TGGGACACGAATAGTTTATT+GGG + chr3_3:71803736-71803755 Msa0469810:intron 35.0%
!! GACCTTTAAAGTGAACAGTA+AGG + chr3_3:71803787-71803806 Msa0469810:intron 35.0%
GGGTCACAAATAGTTTATTG+GGG + chr3_3:71804083-71804102 Msa0469810:intron 35.0%
! ACTTTTAGTGCGAACATTTG+AGG + chr3_3:71804134-71804153 Msa0469810:intron 35.0%
TATTGTGAACAATTGCGCTT+TGG - chr3_3:71804211-71804230 None:intergenic 35.0%
GACAGGAAAAATTGTCAAGA+GGG + chr3_3:71804366-71804385 Msa0469810:intron 35.0%
! GTCAAGAGGGTTTTACATAT+AGG + chr3_3:71804379-71804398 Msa0469810:intron 35.0%
AAACCTAGGATACTCATCTA+GGG - chr3_3:71804476-71804495 None:intergenic 35.0%
TAAACCTAGGATACTCATCT+AGG - chr3_3:71804477-71804496 None:intergenic 35.0%
GATGAGTATCCTAGGTTTAT+CGG + chr3_3:71804478-71804497 Msa0469810:intron 35.0%
AACAAAACACCGATAAACCT+AGG - chr3_3:71804490-71804509 None:intergenic 35.0%
TTGTTAAATGAAATGCACCC+TGG - chr3_3:71804553-71804572 None:intergenic 35.0%
!!! CATGTTCCATCCACTTTTTT+TGG + chr3_3:71804679-71804698 Msa0469810:intron 35.0%
TTCATATGTTGCATGGATGT+AGG + chr3_3:71804859-71804878 Msa0469810:intron 35.0%
TATACACAGCCAAGGAAATT+AGG + chr3_3:71805044-71805063 Msa0469810:intron 35.0%
TCTTTCTGTCCTAATTTCCT+TGG - chr3_3:71805056-71805075 None:intergenic 35.0%
AAGGAAATTAGGACAGAAAG+AGG + chr3_3:71805055-71805074 Msa0469810:intron 35.0%
!!! TGGTACTGGTATGACAATTT+TGG + chr3_3:71805118-71805137 Msa0469810:intron 35.0%
! TCCTTATGCAACTAGACTTT+TGG + chr3_3:71805176-71805195 Msa0469810:intron 35.0%
TCCAAAAGTCTAGTTGCATA+AGG - chr3_3:71805180-71805199 None:intergenic 35.0%
GAAGCGTGCTACATTTATTA+AGG + chr3_3:71805417-71805436 Msa0469810:intron 35.0%
TAAGTGTTTACACTACCAAG+GGG + chr3_3:71805479-71805498 Msa0469810:intron 35.0%
!! TTGCTGTAAAGGTTGATGAA+CGG + chr3_3:71805600-71805619 Msa0469810:intron 35.0%
!! AGTCTTCAGGTATTGAGAAT+GGG - chr3_3:71805778-71805797 None:intergenic 35.0%
!! TAGTCTTCAGGTATTGAGAA+TGG - chr3_3:71805779-71805798 None:intergenic 35.0%
ACATAATGTTGTCCACAAAG+GGG - chr3_3:71805841-71805860 None:intergenic 35.0%
CAACATAATGTTGTCCACAA+AGG - chr3_3:71805843-71805862 None:intergenic 35.0%
! GAAAGCATATTTCAGCTCAT+TGG + chr3_3:71806292-71806311 Msa0469810:intron 35.0%
AAGAACAAAAATTCGAGTGG+TGG - chr3_3:71806322-71806341 None:intergenic 35.0%
TCATTTGAGAACGTGAAAAG+TGG - chr3_3:71806425-71806444 None:intergenic 35.0%
ATATTTGCAGGAAGCAAAGA+AGG + chr3_3:71806641-71806660 Msa0469810:intron 35.0%
TTAAATTGCTTTCTGACCCA+TGG + chr3_3:71806697-71806716 Msa0469810:CDS 35.0%
ATCTCCGTTAACTTCACTCT+GGG + chr3_3:71797285-71797304 Msa0469810:CDS 40.0%
AAGTTCGAGAAGCTTCATCT+TGG + chr3_3:71797427-71797446 Msa0469810:CDS 40.0%
!! GAGTATCAATGGGTTACGTA+TGG + chr3_3:71797451-71797470 Msa0469810:CDS 40.0%
! TCTGTTTGCAGTTTTGCTTC+TGG + chr3_3:71797487-71797506 Msa0469810:CDS 40.0%
!! TTGCAGTTTTGCTTCTGGTT+TGG + chr3_3:71797492-71797511 Msa0469810:CDS 40.0%
CAACACGTTCTTCTCTAACA+TGG - chr3_3:71797528-71797547 None:intergenic 40.0%
ATGCTGACACTAGAGAAGAA+TGG + chr3_3:71797554-71797573 Msa0469810:CDS 40.0%
TTCTCCCAACGAAGCATAAA+TGG - chr3_3:71797737-71797756 None:intergenic 40.0%
TGAGCAAGAAGAGACTGAAT+CGG + chr3_3:71798079-71798098 Msa0469810:intron 40.0%
TTGCGACTGAACACATAGTA+CGG - chr3_3:71798377-71798396 None:intergenic 40.0%
! CTTCTTTTCACCATACCAGT+AGG - chr3_3:71798437-71798456 None:intergenic 40.0%
ACTGGTATGGTGAAAAGAAG+AGG + chr3_3:71798437-71798456 Msa0469810:intron 40.0%
CTGGTATGGTGAAAAGAAGA+GGG + chr3_3:71798438-71798457 Msa0469810:intron 40.0%
TATTGTTCATAGGTACACCG+AGG + chr3_3:71798629-71798648 Msa0469810:intron 40.0%
TGGTACAGATTTCACAAGTG+AGG - chr3_3:71799071-71799090 None:intergenic 40.0%
GAGGTTACAACTGTGATTTG+TGG + chr3_3:71799095-71799114 Msa0469810:CDS 40.0%
AACTGCAACATCAGCTGAAA+GGG - chr3_3:71799300-71799319 None:intergenic 40.0%
TAACTGCAACATCAGCTGAA+AGG - chr3_3:71799301-71799320 None:intergenic 40.0%
! ATGTACACAAGTGGAAGTAC+AGG + chr3_3:71799323-71799342 Msa0469810:CDS 40.0%
AGGAAAGTCAATCCTGTGAA+AGG - chr3_3:71799413-71799432 None:intergenic 40.0%
ATAGTAGCCTAGAGTCTAGA+TGG + chr3_3:71799435-71799454 Msa0469810:intron 40.0%
! CCTATATGCTGAAGTGTTAC+TGG - chr3_3:71799688-71799707 None:intergenic 40.0%
CCAGTAACACTTCAGCATAT+AGG + chr3_3:71799685-71799704 Msa0469810:intron 40.0%
CATGCAAGATAGGAAAACAG+AGG - chr3_3:71799734-71799753 None:intergenic 40.0%
! AATTTGTTTGCTGCTGTTGG+AGG + chr3_3:71799782-71799801 Msa0469810:CDS 40.0%
GGTAAAAAAGGGGACAAAAG+GGG + chr3_3:71799853-71799872 Msa0469810:CDS 40.0%
ATTCTTGATCGTGTTCGTGA+TGG + chr3_3:71799920-71799939 Msa0469810:CDS 40.0%
!! TCGTGATGGAGTTTTCAAGA+AGG + chr3_3:71799934-71799953 Msa0469810:CDS 40.0%
CACATTGGTGCATAATACAC+AGG - chr3_3:71799991-71800010 None:intergenic 40.0%
ATTCACTCACACTCTCACAT+TGG - chr3_3:71800006-71800025 None:intergenic 40.0%
AATTCGTTCTCTGGTCATAC+AGG + chr3_3:71800023-71800042 Msa0469810:intron 40.0%
GGTCATACAGGTAAATGCAA+AGG + chr3_3:71800035-71800054 Msa0469810:intron 40.0%
ATACAGGTAAATGCAAAGGG+AGG + chr3_3:71800039-71800058 Msa0469810:intron 40.0%
TGCAAAGGGAGGATTATCAA+AGG + chr3_3:71800050-71800069 Msa0469810:CDS 40.0%
TTGATTTAGCCTATGCACGA+AGG + chr3_3:71800079-71800098 Msa0469810:CDS 40.0%
CAAAAAGGTCCAAGCAATTC+TGG + chr3_3:71800173-71800192 Msa0469810:CDS 40.0%
TCTTTGTGAGTCACCAGAAA+GGG - chr3_3:71800235-71800254 None:intergenic 40.0%
ATCTTTGTGAGTCACCAGAA+AGG - chr3_3:71800236-71800255 None:intergenic 40.0%
TTACTCCTACTCTTCCCTAA+TGG - chr3_3:71800415-71800434 None:intergenic 40.0%
GAGTAAAACAATGGTCGTGA+AGG + chr3_3:71800429-71800448 Msa0469810:intron 40.0%
TCCAGTAGTATATAAGGTCG+GGG + chr3_3:71800488-71800507 Msa0469810:intron 40.0%
!! ATTTGGTGCTTAACACTCCA+TGG - chr3_3:71800685-71800704 None:intergenic 40.0%
GAAAAACGGGTCAAACTTGA+AGG - chr3_3:71800807-71800826 None:intergenic 40.0%
!! TCAAGTTTGACCCGTTTTTC+CGG + chr3_3:71800807-71800826 Msa0469810:intron 40.0%
AAGGACCAAATCCGGAAAAA+CGG - chr3_3:71800821-71800840 None:intergenic 40.0%
!!! GTGCATGTTTTGAGACTGAA+AGG - chr3_3:71800856-71800875 None:intergenic 40.0%
! AAGTTCTGACTTGCAGTTAC+TGG + chr3_3:71801008-71801027 Msa0469810:intron 40.0%
AAGCTCATGGTCTTTCTTAG+GGG - chr3_3:71801099-71801118 None:intergenic 40.0%
GAAAGCTCATGGTCTTTCTT+AGG - chr3_3:71801101-71801120 None:intergenic 40.0%
CATAGGCAAAATTACACTCG+TGG - chr3_3:71801368-71801387 None:intergenic 40.0%
TGATTCACTGTCTGATTCCA+AGG + chr3_3:71801436-71801455 Msa0469810:intron 40.0%
ACTCGCAAGTTCATCTATCT+TGG - chr3_3:71801504-71801523 None:intergenic 40.0%
ATAGACCGGCAACAAGTATT+GGG - chr3_3:71801652-71801671 None:intergenic 40.0%
AATAGACCGGCAACAAGTAT+TGG - chr3_3:71801653-71801672 None:intergenic 40.0%
! AATACTTGTTGCCGGTCTAT+TGG + chr3_3:71801652-71801671 Msa0469810:intron 40.0%
! TTTTCAGAAGGCCAATAGAC+CGG - chr3_3:71801666-71801685 None:intergenic 40.0%
GTGAAGTTAGTAAGAAGCAG+TGG - chr3_3:71801743-71801762 None:intergenic 40.0%
AGACCATATGCTTGACCTAT+TGG - chr3_3:71801867-71801886 None:intergenic 40.0%
!! ACATATGTGGAAGGTTTTGG+CGG - chr3_3:71801954-71801973 None:intergenic 40.0%
! CTGCATTTTTGTAGTTGACC+AGG - chr3_3:71802211-71802230 None:intergenic 40.0%
CAGTAATAGATGTCTACTCC+TGG + chr3_3:71802271-71802290 Msa0469810:intron 40.0%
AAATGGGAGGAATATACGGA+AGG + chr3_3:71802968-71802987 Msa0469810:intron 40.0%
GTAGTTGAATATCCACCTTC+AGG - chr3_3:71803114-71803133 None:intergenic 40.0%
CCAATTACTATTTCACCACG+AGG - chr3_3:71803150-71803169 None:intergenic 40.0%
CCTCGTGGTGAAATAGTAAT+TGG + chr3_3:71803147-71803166 Msa0469810:CDS 40.0%
CGTGGTGAAATAGTAATTGG+TGG + chr3_3:71803150-71803169 Msa0469810:CDS 40.0%
AAATACCCAAGAGTGACACT+TGG - chr3_3:71803177-71803196 None:intergenic 40.0%
!! GCTTAAGCTTTTAGGAGAGT+TGG + chr3_3:71803380-71803399 Msa0469810:intron 40.0%
! GAGGCTTTGATATAATGCCA+AGG - chr3_3:71803407-71803426 None:intergenic 40.0%
AACTCCTGACTACTTGGTTA+TGG - chr3_3:71803429-71803448 None:intergenic 40.0%
TTCGTTTCAAAGAACAGAGG+TGG - chr3_3:71803461-71803480 None:intergenic 40.0%
TGACAGTTCTTGACGTAGAT+TGG + chr3_3:71803598-71803617 Msa0469810:intron 40.0%
GGGACACGAATAGTTTATTG+GGG + chr3_3:71803737-71803756 Msa0469810:intron 40.0%
TGACAGTTCTTGACGTAGAT+TGG + chr3_3:71803598-71803617 Msa0469810:intron 40.0%
TCAAGAGGGTCTTACAGATA+GGG - chr3_3:71804188-71804207 None:intergenic 40.0%
! GAAAAGAGTCTTATAGGGAC+AGG + chr3_3:71804349-71804368 Msa0469810:intron 40.0%
GGACAGGAAAAATTGTCAAG+AGG + chr3_3:71804365-71804384 Msa0469810:intron 40.0%
! GTGGAAATAGCTTGTACACA+AGG - chr3_3:71804583-71804602 None:intergenic 40.0%
ACTGAGCCAAAAAAAGTGGA+TGG - chr3_3:71804688-71804707 None:intergenic 40.0%
TGAGACTGAGCCAAAAAAAG+TGG - chr3_3:71804692-71804711 None:intergenic 40.0%
TTATTACGGTCTTCTTGCAC+AGG + chr3_3:71804803-71804822 Msa0469810:intron 40.0%
ATGTTGCATGGATGTAGGTA+TGG + chr3_3:71804864-71804883 Msa0469810:intron 40.0%
ATGGATGTAGGTATGGTATC+AGG + chr3_3:71804871-71804890 Msa0469810:intron 40.0%
!! TGCTGTAAAGGTTGATGAAC+GGG + chr3_3:71805601-71805620 Msa0469810:intron 40.0%
TGACGTAGGTAGATTTCATG+CGG + chr3_3:71805646-71805665 Msa0469810:CDS 40.0%
GTTGCCTTGAGATCATTGAT+AGG + chr3_3:71805672-71805691 Msa0469810:CDS 40.0%
GACATAGTTAAACTGCAGCA+TGG + chr3_3:71805701-71805720 Msa0469810:CDS 40.0%
GGACAACATTATGTTGCATG+CGG + chr3_3:71805847-71805866 Msa0469810:CDS 40.0%
TCATCCTGCATTGGATGAAT+GGG + chr3_3:71805910-71805929 Msa0469810:CDS 40.0%
CAGCAAAGAAGAAACAGTGA+AGG + chr3_3:71805976-71805995 Msa0469810:CDS 40.0%
CAAAGAAGAAACAGTGAAGG+AGG + chr3_3:71805979-71805998 Msa0469810:CDS 40.0%
TTGACTGTTAGAAAATGGGG+AGG + chr3_3:71806208-71806227 Msa0469810:intron 40.0%
GGAATACATGAAATAGGGAG+AGG - chr3_3:71806404-71806423 None:intergenic 40.0%
CAAATTCATAACGTACCTGG+AGG + chr3_3:71806468-71806487 Msa0469810:intron 40.0%
TCTTAAGAGCTGCAGTAACT+AGG - chr3_3:71806737-71806756 None:intergenic 40.0%
AAGTTAACGGAGATGTGACG+CGG - chr3_3:71797279-71797298 None:intergenic 45.0%
CATCTCCGTTAACTTCACTC+TGG + chr3_3:71797284-71797303 Msa0469810:CDS 45.0%
CCTTCCCAGAGTGAAGTTAA+CGG - chr3_3:71797292-71797311 None:intergenic 45.0%
!! TCAATGGGTTACGTATGGGA+AGG + chr3_3:71797456-71797475 Msa0469810:CDS 45.0%
! TGTTTGTTCAGGCTTGCTTC+CGG + chr3_3:71797692-71797711 Msa0469810:intron 45.0%
TGCGACTGAACACATAGTAC+GGG - chr3_3:71798376-71798395 None:intergenic 45.0%
TGATCGGCACAAATCTCTTG+AGG + chr3_3:71798554-71798573 Msa0469810:intron 45.0%
GATCGGCACAAATCTCTTGA+GGG + chr3_3:71798555-71798574 Msa0469810:intron 45.0%
! GATGATGACAACAAGAGCAC+AGG - chr3_3:71799020-71799039 None:intergenic 45.0%
GTGAAATCTGTACCAGACAG+AGG + chr3_3:71799076-71799095 Msa0469810:intron 45.0%
TCACAGTTGTAACCTCTGTC+TGG - chr3_3:71799091-71799110 None:intergenic 45.0%
TGGTAGAGAAAACCCTATCG+AGG + chr3_3:71799265-71799284 Msa0469810:CDS 45.0%
ACTGCAACATCAGCTGAAAG+GGG - chr3_3:71799299-71799318 None:intergenic 45.0%
CACACTACCATCTAGACTCT+AGG - chr3_3:71799445-71799464 None:intergenic 45.0%
TGTTCCTGAACTTGGGACAA+AGG + chr3_3:71799599-71799618 Msa0469810:CDS 45.0%
ACATCCTTTGTCCCAAGTTC+AGG - chr3_3:71799606-71799625 None:intergenic 45.0%
GTTGGAGGCTGTATAGGATA+CGG + chr3_3:71799797-71799816 Msa0469810:CDS 45.0%
! TGCATTGATGCCAACTGTGT+TGG + chr3_3:71799883-71799902 Msa0469810:CDS 45.0%
CGAACACGATCAAGAATTGC+TGG - chr3_3:71799917-71799936 None:intergenic 45.0%
GTGTGAGTGAATTCGTTCTC+TGG + chr3_3:71800014-71800033 Msa0469810:intron 45.0%
CGAAGGATGCAAGCGATTAA+TGG + chr3_3:71800096-71800115 Msa0469810:CDS 45.0%
TGCAAGCGATTAATGGTAGC+TGG + chr3_3:71800103-71800122 Msa0469810:CDS 45.0%
GCGATTAATGGTAGCTGGTT+TGG + chr3_3:71800108-71800127 Msa0469810:CDS 45.0%
GGGGATTGGAAAAAGCTCTA+TGG + chr3_3:71800136-71800155 Msa0469810:CDS 45.0%
CTTTGTGAGTCACCAGAAAG+GGG - chr3_3:71800234-71800253 None:intergenic 45.0%
CCAGTAGTATATAAGGTCGG+GGG + chr3_3:71800489-71800508 Msa0469810:intron 45.0%
TTTCTCATGTCACGCGCATT+TGG - chr3_3:71800702-71800721 None:intergenic 45.0%
GGTCAAACTTGAAGGACATC+AGG - chr3_3:71800799-71800818 None:intergenic 45.0%
!! TTGACCCGTTTTTCCGGATT+TGG + chr3_3:71800813-71800832 Msa0469810:intron 45.0%
AGGACCAAATCCGGAAAAAC+GGG - chr3_3:71800820-71800839 None:intergenic 45.0%
CTTGCAGTTACTGGAAGCAA+AGG + chr3_3:71801017-71801036 Msa0469810:intron 45.0%
! TCAACCCCAATACTTGTTGC+CGG + chr3_3:71801644-71801663 Msa0469810:intron 45.0%
! TAGACCGGCAACAAGTATTG+GGG - chr3_3:71801651-71801670 None:intergenic 45.0%
!! GTCGTTTTCAGTGCTCCAAT+AGG + chr3_3:71801849-71801868 Msa0469810:intron 45.0%
GCTCCAATAGGTCAAGCATA+TGG + chr3_3:71801861-71801880 Msa0469810:CDS 45.0%
AGGTCAAGCATATGGTCTCA+CGG + chr3_3:71801869-71801888 Msa0469810:CDS 45.0%
GTTGACCAGGTGTAAGTTCA+TGG - chr3_3:71802198-71802217 None:intergenic 45.0%
TCATGTCATGCCCAACTTCT+TGG + chr3_3:71802751-71802770 Msa0469810:intron 45.0%
TCATCAGGACTTTGTGCATG+TGG + chr3_3:71802783-71802802 Msa0469810:intron 45.0%
ACTATTTCACCACGAGGCAT+CGG - chr3_3:71803144-71803163 None:intergenic 45.0%
!! CTTTTAGGAGAGTTGGTCCT+TGG + chr3_3:71803387-71803406 Msa0469810:intron 45.0%
TCCTGACTACTTGGTTATGG+AGG - chr3_3:71803426-71803445 None:intergenic 45.0%
GGAGAAAACTCCTGACTACT+TGG - chr3_3:71803435-71803454 None:intergenic 45.0%
TTCAAAGAACAGAGGTGGTG+AGG - chr3_3:71803456-71803475 None:intergenic 45.0%
GTCCCGGTAAGATTCATGAA+TGG - chr3_3:71803550-71803569 None:intergenic 45.0%
TTCATGAATCTTACCGGGAC+AGG + chr3_3:71803550-71803569 Msa0469810:intron 45.0%
GTCAAGAGGGTCTTACAGAT+AGG - chr3_3:71804189-71804208 None:intergenic 45.0%
CAATTGCGCTTTGGTCAAGA+GGG - chr3_3:71804202-71804221 None:intergenic 45.0%
ACAATTGCGCTTTGGTCAAG+AGG - chr3_3:71804203-71804222 None:intergenic 45.0%
! GGTTTTACATATAGGGACCG+AGG + chr3_3:71804387-71804406 Msa0469810:intron 45.0%
TCACCCTAGATGAGTATCCT+AGG + chr3_3:71804470-71804489 Msa0469810:intron 45.0%
ATGCAGTGAACAGAGCATAG+TGG - chr3_3:71804715-71804734 None:intergenic 45.0%
GTAGGTATGGTATCAGGAAC+TGG + chr3_3:71804877-71804896 Msa0469810:intron 45.0%
ATTGTCATACCAGTACCACC+CGG - chr3_3:71805116-71805135 None:intergenic 45.0%
TTACACTACCAAGGGGAGTT+TGG + chr3_3:71805486-71805505 Msa0469810:intron 45.0%
!! GCTGTAAAGGTTGATGAACG+GGG + chr3_3:71805602-71805621 Msa0469810:intron 45.0%
GTAGGTAGATTTCATGCGGA+TGG + chr3_3:71805650-71805669 Msa0469810:CDS 45.0%
CATGGAGAATATGTGTCCCT+GGG + chr3_3:71805719-71805738 Msa0469810:CDS 45.0%
AGAATATGTGTCCCTGGGAA+AGG + chr3_3:71805724-71805743 Msa0469810:CDS 45.0%
AAGTTACTGTGTGGCACTTG+TGG + chr3_3:71805880-71805899 Msa0469810:CDS 45.0%
CTCATCCTGCATTGGATGAA+TGG + chr3_3:71805909-71805928 Msa0469810:CDS 45.0%
! GATGAATGGGCTTCAAAGCA+AGG + chr3_3:71805923-71805942 Msa0469810:CDS 45.0%
GGTGCATGCATCACTTGTAA+AGG + chr3_3:71806000-71806019 Msa0469810:CDS 45.0%
ATTCATAACGTACCTGGAGG+TGG + chr3_3:71806471-71806490 Msa0469810:intron 45.0%
!! TATACATAAAATATATAATT+AGG - chr3_3:71797941-71797960 None:intergenic 5.0%
!! ATTTAAAAAGATAATATATT+AGG - chr3_3:71802850-71802869 None:intergenic 5.0%
!!! TAATATATTATCTTTTTAAA+TGG + chr3_3:71802849-71802868 Msa0469810:intron 5.0%
GTTTGCGGTTGTTGGAGTTG+CGG - chr3_3:71797201-71797220 None:intergenic 50.0%
! CCGTTAACTTCACTCTGGGA+AGG + chr3_3:71797289-71797308 Msa0469810:CDS 50.0%
!! GCTTCTGGTTTGGCGAAGAT+TGG + chr3_3:71797502-71797521 Msa0469810:CDS 50.0%
CACATAGTACGGGTGCGATA+CGG - chr3_3:71798366-71798385 None:intergenic 50.0%
GGGGTAAATCAGCCTCGATA+GGG - chr3_3:71799280-71799299 None:intergenic 50.0%
AGGGGTAAATCAGCCTCGAT+AGG - chr3_3:71799281-71799300 None:intergenic 50.0%
! TGGAAGTACAGGCTTGCCTA+AGG + chr3_3:71799334-71799353 Msa0469810:CDS 50.0%
! CAGGGTGTGATGATGACACA+TGG + chr3_3:71799540-71799559 Msa0469810:intron 50.0%
CACAGTTGGCATCAATGCAG+TGG - chr3_3:71799882-71799901 None:intergenic 50.0%
GGTACAGCTACCAACACAGT+TGG - chr3_3:71799896-71799915 None:intergenic 50.0%
!! ATGGTAGCTGGTTTGGTGCT+TGG + chr3_3:71800115-71800134 Msa0469810:CDS 50.0%
!! TGGTAGCTGGTTTGGTGCTT+GGG + chr3_3:71800116-71800135 Msa0469810:CDS 50.0%
AAGGTCCAAGCAATTCTGGG+TGG + chr3_3:71800177-71800196 Msa0469810:CDS 50.0%
TACGACCACCCAGAATTGCT+TGG - chr3_3:71800185-71800204 None:intergenic 50.0%
CCCCCGACCTTATATACTAC+TGG - chr3_3:71800492-71800511 None:intergenic 50.0%
GCAGTAGCCTTCTCAACTCA+TGG - chr3_3:71800591-71800610 None:intergenic 50.0%
GTCTCAAAACATGCACGTCG+TGG + chr3_3:71800860-71800879 Msa0469810:intron 50.0%
CACAGTGCGGCAAAAAAGTG+TGG - chr3_3:71801123-71801142 None:intergenic 50.0%
!! TCAGGACTGGTCTCTGCTAA+AGG + chr3_3:71801704-71801723 Msa0469810:intron 50.0%
GATACTTCTGTTGGCCGTGT+AGG + chr3_3:71801927-71801946 Msa0469810:CDS 50.0%
!! AAGGTTTTGGCGGTCCTACA+CGG - chr3_3:71801944-71801963 None:intergenic 50.0%
TTGCTTTGTGGCCCTTCTCA+TGG - chr3_3:71802653-71802672 None:intergenic 50.0%
GAGAAGGGCCACAAAGCAAT+TGG + chr3_3:71802654-71802673 Msa0469810:intron 50.0%
!! CAGTTAATCGACTGGCCTGA+AGG + chr3_3:71803096-71803115 Msa0469810:intron 50.0%
!! TTAATCGACTGGCCTGAAGG+TGG + chr3_3:71803099-71803118 Msa0469810:CDS 50.0%
! GTGGTCCAAGTGTCACTCTT+GGG + chr3_3:71803169-71803188 Msa0469810:CDS 50.0%
GCCTCCATAACCAAGTAGTC+AGG + chr3_3:71803422-71803441 Msa0469810:intron 50.0%
GGTCTTACAGATAGGGAAGG+AGG - chr3_3:71804181-71804200 None:intergenic 50.0%
GAGGGTCTTACAGATAGGGA+AGG - chr3_3:71804184-71804203 None:intergenic 50.0%
!! AGGTTGATGAACGGGGAATG+AGG + chr3_3:71805609-71805628 Msa0469810:intron 50.0%
TTGATGAACGGGGAATGAGG+TGG + chr3_3:71805612-71805631 Msa0469810:CDS 50.0%
! GGAATGAGGTGGTTCTACAC+TGG + chr3_3:71805623-71805642 Msa0469810:CDS 50.0%
! TGGTTCTACACTGGTGACGT+AGG + chr3_3:71805632-71805651 Msa0469810:CDS 50.0%
GCATGGAGAATATGTGTCCC+TGG + chr3_3:71805718-71805737 Msa0469810:CDS 50.0%
GTGCATGCATACCTTTCCCA+GGG - chr3_3:71805738-71805757 None:intergenic 50.0%
! GGAAAGGTATGCATGCACGT+TGG + chr3_3:71805740-71805759 Msa0469810:intron 50.0%
! CAGGTTGAGGCAGTTCTTCT+TGG + chr3_3:71805812-71805831 Msa0469810:intron 50.0%
!! GGCTGTTTCTCATCCTGCAT+TGG + chr3_3:71805901-71805920 Msa0469810:CDS 50.0%
GAAGCCCATTCATCCAATGC+AGG - chr3_3:71805917-71805936 None:intergenic 50.0%
AACGATGAGGCCGGCAATGT+AGG - chr3_3:71797158-71797177 None:intergenic 55.0%
GGATGACGAGAGGAACGATG+AGG - chr3_3:71797171-71797190 None:intergenic 55.0%
TGTTGGAGTTGCGGAAGAGG+AGG - chr3_3:71797192-71797211 None:intergenic 55.0%
GGTTGTTGGAGTTGCGGAAG+AGG - chr3_3:71797195-71797214 None:intergenic 55.0%
TTAACGGAGATGTGACGCGG+TGG - chr3_3:71797276-71797295 None:intergenic 55.0%
GTGGAGATGTAAGCGGGTGA+TGG + chr3_3:71798053-71798072 Msa0469810:intron 55.0%
GAGCAGATGCGGCATCAGAT+GGG - chr3_3:71799202-71799221 None:intergenic 55.0%
TGAGCAGATGCGGCATCAGA+TGG - chr3_3:71799203-71799222 None:intergenic 55.0%
CCATCCATGCTGAGCAGATG+CGG - chr3_3:71799213-71799232 None:intergenic 55.0%
GCTGCTGTTGGAGGCTGTAT+AGG + chr3_3:71799791-71799810 Msa0469810:CDS 55.0%
CGCTTGCATCCTTCGTGCAT+AGG - chr3_3:71800091-71800110 None:intergenic 55.0%
!! GGTAGCTGGTTTGGTGCTTG+GGG + chr3_3:71800117-71800136 Msa0469810:CDS 55.0%
!! CTGGTTTGGTGCTTGGGGAT+TGG + chr3_3:71800122-71800141 Msa0469810:CDS 55.0%
! TCACGGAGACTTGTGCTGGT+GGG + chr3_3:71801886-71801905 Msa0469810:CDS 55.0%
! GGTGGTCCAAGTGTCACTCT+TGG + chr3_3:71803168-71803187 Msa0469810:CDS 55.0%
! AGTGAAGTGTCCACGAGCAC+CGG + chr3_3:71805094-71805113 Msa0469810:intron 55.0%
! TGGCTCTACCAAACTCCCCT+TGG - chr3_3:71805497-71805516 None:intergenic 55.0%
CGTGCATGCATACCTTTCCC+AGG - chr3_3:71805739-71805758 None:intergenic 55.0%
TCTTCTTGGCAGCCCCTTTG+TGG + chr3_3:71805826-71805845 Msa0469810:CDS 55.0%
AACGTACCTGGAGGTGGAGT+AGG + chr3_3:71806477-71806496 Msa0469810:intron 55.0%
ACGTACCTGGAGGTGGAGTA+GGG + chr3_3:71806478-71806497 Msa0469810:intron 55.0%
TACTTCCCTACTCCACCTCC+AGG - chr3_3:71806486-71806505 None:intergenic 55.0%
GGAAGCAAAGAAGGCTCGTC+TGG + chr3_3:71806650-71806669 Msa0469810:intron 55.0%
GCAGTAACTAGGCCAGTCTC+AGG - chr3_3:71806726-71806745 None:intergenic 55.0%
GACGAGAGGAACGATGAGGC+CGG - chr3_3:71797167-71797186 None:intergenic 60.0%
CGGAAGAGGAGGATGACGAG+AGG - chr3_3:71797181-71797200 None:intergenic 60.0%
TCCAACAACCGCAAACGCCG+CGG + chr3_3:71797205-71797224 Msa0469810:CDS 60.0%
GAGATGTGACGCGGTGGTTG+CGG - chr3_3:71797270-71797289 None:intergenic 60.0%
GATGCCGCATCTGCTCAGCA+TGG + chr3_3:71799206-71799225 Msa0469810:CDS 60.0%
CCGCATCTGCTCAGCATGGA+TGG + chr3_3:71799210-71799229 Msa0469810:CDS 60.0%
! TGTGGTGGTGCACCCCTTTC+TGG + chr3_3:71800219-71800238 Msa0469810:CDS 60.0%
GGTCTCACGGAGACTTGTGC+TGG + chr3_3:71801882-71801901 Msa0469810:CDS 60.0%
CTCACGGAGACTTGTGCTGG+TGG + chr3_3:71801885-71801904 Msa0469810:CDS 60.0%
! ACTGACTCACCGATGCCTCG+TGG + chr3_3:71803132-71803151 Msa0469810:CDS 60.0%
! GTGAAGTGTCCACGAGCACC+GGG + chr3_3:71805095-71805114 Msa0469810:intron 60.0%
GACCCATGGACTCCTGAGAC+TGG + chr3_3:71806711-71806730 Msa0469810:CDS 60.0%
GGCCAGTCTCAGGAGTCCAT+GGG - chr3_3:71806716-71806735 None:intergenic 60.0%
AGGCCAGTCTCAGGAGTCCA+TGG - chr3_3:71806717-71806736 None:intergenic 60.0%
TGGTTGCGGACCGCGAAACC+AGG - chr3_3:71797256-71797275 None:intergenic 65.0%
! GGAAGGCGTGACGACACTCG+CGG + chr3_3:71797306-71797325 Msa0469810:CDS 65.0%
!! AAGTGTCCACGAGCACCGGG+TGG + chr3_3:71805098-71805117 Msa0469810:intron 65.0%
GCCGCGGCGTTTGCGGTTGT+TGG - chr3_3:71797209-71797228 None:intergenic 70.0%
CCGGTAAGCCGCGGCGTTTG+CGG - chr3_3:71797216-71797235 None:intergenic 70.0%
CCGCAAACGCCGCGGCTTAC+CGG + chr3_3:71797213-71797232 Msa0469810:CDS 70.0%
ACCAGGTTCGCCGCCGACGT+CGG - chr3_3:71797239-71797258 None:intergenic 70.0%
CGGCGGCGAACCTGGTTTCG+CGG + chr3_3:71797243-71797262 Msa0469810:CDS 70.0%
CCAGTACCACCCGGTGCTCG+TGG - chr3_3:71805107-71805126 None:intergenic 70.0%
!! CCACGAGCACCGGGTGGTAC+TGG + chr3_3:71805104-71805123 Msa0469810:intron 70.0%
CGACGTCGGCCGGTAAGCCG+CGG - chr3_3:71797225-71797244 None:intergenic 75.0%
CGCGGCTTACCGGCCGACGT+CGG + chr3_3:71797223-71797242 Msa0469810:CDS 75.0%
GGCTTACCGGCCGACGTCGG+CGG + chr3_3:71797226-71797245 Msa0469810:CDS 75.0%
! GGTTCGCCGCCGACGTCGGC+CGG - chr3_3:71797235-71797254 None:intergenic 80.0%
! GCCGACGTCGGCGGCGAACC+TGG + chr3_3:71797235-71797254 Msa0469810:CDS 80.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 71797148 71806818 71797148 ID=Msa0469810;Name=Msa0469810
chr3_3 mRNA 71797148 71806818 71797148 ID=Msa0469810-mRNA-1;Parent=Msa0469810;Name=Msa0469810-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|1|11|0|694
chr3_3 exon 71797148 71797591 71797148 ID=Msa0469810-mRNA-1:exon:17686;Parent=Msa0469810-mRNA-1
chr3_3 exon 71797703 71797783 71797703 ID=Msa0469810-mRNA-1:exon:17687;Parent=Msa0469810-mRNA-1
chr3_3 exon 71799092 71799355 71799092 ID=Msa0469810-mRNA-1:exon:17688;Parent=Msa0469810-mRNA-1
chr3_3 exon 71799543 71799674 71799543 ID=Msa0469810-mRNA-1:exon:17689;Parent=Msa0469810-mRNA-1
chr3_3 exon 71799782 71799955 71799782 ID=Msa0469810-mRNA-1:exon:17690;Parent=Msa0469810-mRNA-1
chr3_3 exon 71800045 71800274 71800045 ID=Msa0469810-mRNA-1:exon:17691;Parent=Msa0469810-mRNA-1
chr3_3 exon 71801860 71801977 71801860 ID=Msa0469810-mRNA-1:exon:17692;Parent=Msa0469810-mRNA-1
chr3_3 exon 71803099 71803230 71803099 ID=Msa0469810-mRNA-1:exon:17693;Parent=Msa0469810-mRNA-1
chr3_3 exon 71805611 71805745 71805611 ID=Msa0469810-mRNA-1:exon:17694;Parent=Msa0469810-mRNA-1
chr3_3 exon 71805815 71806021 71805815 ID=Msa0469810-mRNA-1:exon:17695;Parent=Msa0469810-mRNA-1
chr3_3 exon 71806651 71806818 71806651 ID=Msa0469810-mRNA-1:exon:17696;Parent=Msa0469810-mRNA-1
chr3_3 CDS 71797148 71797591 71797148 ID=Msa0469810-mRNA-1:cds;Parent=Msa0469810-mRNA-1
chr3_3 CDS 71797703 71797783 71797703 ID=Msa0469810-mRNA-1:cds;Parent=Msa0469810-mRNA-1
chr3_3 CDS 71799092 71799355 71799092 ID=Msa0469810-mRNA-1:cds;Parent=Msa0469810-mRNA-1
chr3_3 CDS 71799543 71799674 71799543 ID=Msa0469810-mRNA-1:cds;Parent=Msa0469810-mRNA-1
chr3_3 CDS 71799782 71799955 71799782 ID=Msa0469810-mRNA-1:cds;Parent=Msa0469810-mRNA-1
chr3_3 CDS 71800045 71800274 71800045 ID=Msa0469810-mRNA-1:cds;Parent=Msa0469810-mRNA-1
chr3_3 CDS 71801860 71801977 71801860 ID=Msa0469810-mRNA-1:cds;Parent=Msa0469810-mRNA-1
chr3_3 CDS 71803099 71803230 71803099 ID=Msa0469810-mRNA-1:cds;Parent=Msa0469810-mRNA-1
chr3_3 CDS 71805611 71805745 71805611 ID=Msa0469810-mRNA-1:cds;Parent=Msa0469810-mRNA-1
chr3_3 CDS 71805815 71806021 71805815 ID=Msa0469810-mRNA-1:cds;Parent=Msa0469810-mRNA-1
chr3_3 CDS 71806651 71806818 71806651 ID=Msa0469810-mRNA-1:cds;Parent=Msa0469810-mRNA-1
Gene Sequence

>Msa0469810

ATGAACGCCTACATTGCCGGCCTCATCGTTCCTCTCGTCATCCTCCTCTTCCGCAACTCCAACAACCGCAAACGCCGCGGCTTACCGGCCGACGTCGGCGGCGAACCTGGTTTCGCGGTCCGCAACCACCGCGTCACATCTCCGTTAACTTCACTCTGGGAAGGCGTGACGACACTCGCGGAGCTTTTCGAGCTAACATGCAACAAGAATCATGATAGATTGTTACTCGGAACTCGTGAATTGATCTCACGTGAAATGGAAACTTCTTCTGATGGAAGAAAGTTCGAGAAGCTTCATCTTGGAGAGTATCAATGGGTTACGTATGGGAAGGTTTTTGAATCTGTTTGCAGTTTTGCTTCTGGTTTGGCGAAGATTGGCCATGTTAGAGAAGAACGTGTTGCGATTTATGCTGACACTAGAGAAGAATGGTTTATTGCATTGCAGGCTTGCTTCCGGAGAAATGTGACTGTTGTTACCATTTATGCTTCGTTGGGAGAAGAAGCTTTGTGTCATTCATTGAATGAGACAGAGGTTACAACTGTGATTTGTGGCCGCAAAGAATTGAAATCACTTGTAAATATTGCTGGACAACTTGACACTGTGAAACGTGTGATATGTATTGAAGATGATGTCCCATCTGATGCCGCATCTGCTCAGCATGGATGGACAATCATTTCCTTTTCTGATGTTGAAAGGCTTGGTAGAGAAAACCCTATCGAGGCTGATTTACCCCTTTCAGCTGATGTTGCAGTTATAATGTACACAAGTGGAAGTACAGGCTTGCCTAAGGGTGTGATGATGACACATGGCAATATCTTAGCAACAGTGTCTGCTGTAGTGAAAATTGTTCCTGAACTTGGGACAAAGGATGTATATCTAGCATACTTACCAATGGCTCATATTCTTGAATTAATAGCTGAGAATTTGTTTGCTGCTGTTGGAGGCTGTATAGGATACGGAACTCCATTAACTCTAACCGATACATCAAACAAGGTAAAAAAGGGGACAAAAGGGGATGCCACTGCATTGATGCCAACTGTGTTGGTAGCTGTACCAGCAATTCTTGATCGTGTTCGTGATGGAGTTTTCAAGAAGGTAAATGCAAAGGGAGGATTATCAAAGGCATTGTTTGATTTAGCCTATGCACGAAGGATGCAAGCGATTAATGGTAGCTGGTTTGGTGCTTGGGGATTGGAAAAAGCTCTATGGAATTTTCTTGTCTTCAAAAAGGTCCAAGCAATTCTGGGTGGTCGTATTCGTTTTATACTATGTGGTGGTGCACCCCTTTCTGGTGACTCACAAAGATTCATCAACATTTGTCTTGGTGCTCCAATAGGTCAAGCATATGGTCTCACGGAGACTTGTGCTGGTGGGACATTTTCTGATTTTGACGATACTTCTGTTGGCCGTGTAGGACCGCCAAAACCTTCCACATATGTTAAGTTAATCGACTGGCCTGAAGGTGGATATTCAACTACTGACTCACCGATGCCTCGTGGTGAAATAGTAATTGGTGGTCCAAGTGTCACTCTTGGGTATTTCAAAAATGAAGAAAAGACAAGAGAGTCTTACAAGGTTGATGAACGGGGAATGAGGTGGTTCTACACTGGTGACGTAGGTAGATTTCATGCGGATGGTTGCCTTGAGATCATTGATAGGAAAAAGGACATAGTTAAACTGCAGCATGGAGAATATGTGTCCCTGGGAAAGGTTGAGGCAGTTCTTCTTGGCAGCCCCTTTGTGGACAACATTATGTTGCATGCGGATTCTTTTCAAAGTTACTGTGTGGCACTTGTGGCTGTTTCTCATCCTGCATTGGATGAATGGGCTTCAAAGCAAGGAATTGCTTATTCTGATCTTTCAGAACTGTGCAGCAAAGAAGAAACAGTGAAGGAGGTGCATGCATCACTTGTAAAGGAAGCAAAGAAGGCTCGTCTGGAAAAATTTGAAATTCCTGCAAAACTTAAATTGCTTTCTGACCCATGGACTCCTGAGACTGGCCTAGTTACTGCAGCTCTTAAGATCAAGAGAGATGTCATTAGAAAGACTTTTCAAGAAGAGCTCTCAAAGTTATATGCCAAATAG
Protein sequence

>Msa0469810

MNAYIAGLIVPLVILLFRNSNNRKRRGLPADVGGEPGFAVRNHRVTSPLTSLWEGVTTLAELFELTCNKNHDRLLLGTRELISREMETSSDGRKFEKLHLGEYQWVTYGKVFESVCSFASGLAKIGHVREERVAIYADTREEWFIALQACFRRNVTVVTIYASLGEEALCHSLNETEVTTVICGRKELKSLVNIAGQLDTVKRVICIEDDVPSDAASAQHGWTIISFSDVERLGRENPIEADLPLSADVAVIMYTSGSTGLPKGVMMTHGNILATVSAVVKIVPELGTKDVYLAYLPMAHILELIAENLFAAVGGCIGYGTPLTLTDTSNKVKKGTKGDATALMPTVLVAVPAILDRVRDGVFKKVNAKGGLSKALFDLAYARRMQAINGSWFGAWGLEKALWNFLVFKKVQAILGGRIRFILCGGAPLSGDSQRFINICLGAPIGQAYGLTETCAGGTFSDFDDTSVGRVGPPKPSTYVKLIDWPEGGYSTTDSPMPRGEIVIGGPSVTLGYFKNEEKTRESYKVDERGMRWFYTGDVGRFHADGCLEIIDRKKDIVKLQHGEYVSLGKVEAVLLGSPFVDNIMLHADSFQSYCVALVAVSHPALDEWASKQGIAYSDLSELCSKEETVKEVHASLVKEAKKARLEKFEIPAKLKLLSDPWTPETGLVTAALKIKRDVIRKTFQEELSKLYAK*