AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0469800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0469800 MtrunA17_Chr3g0124631 94.269 698 36 1 1 694 1 698 0.0 1341
Msa0469800 MtrunA17_Chr1g0160041 76.403 695 162 2 1 693 1 695 0.0 1117
Msa0469800 MtrunA17_Chr3g0120731 61.295 695 265 2 3 693 33 727 0.0 899
Msa0469800 MtrunA17_Chr1g0205711 35.194 645 374 11 56 694 80 686 2.82e-119 372
Msa0469800 MtrunA17_Chr5g0396691 32.099 648 395 14 55 692 42 654 8.38e-103 328
Msa0469800 MtrunA17_Chr5g0396711 31.944 648 396 14 55 692 42 654 3.62e-100 321
Msa0469800 MtrunA17_Chr1g0194371 31.798 673 401 14 37 692 22 653 3.52e-98 316
Msa0469800 MtrunA17_Chr4g0034181 31.062 631 382 16 78 692 58 651 1.38e-93 304
Msa0469800 MtrunA17_Chr8g0388081 31.509 603 380 11 101 692 13 593 7.65e-92 297
Msa0469800 MtrunA17_Chr7g0270221 31.988 644 346 16 56 685 41 606 4.53e-91 296
Msa0469800 MtrunA17_Chr1g0162621 30.015 683 420 16 27 692 12 653 8.23e-91 296
Msa0469800 MtrunA17_Chr3g0121951 25.193 647 387 21 106 692 105 714 3.08e-38 151
Msa0469800 MtrunA17_Chr3g0121931 24.493 641 402 16 106 692 107 719 3.41e-38 151
Msa0469800 MtrunA17_Chr8g0377991 25.078 642 399 18 106 692 109 723 6.48e-35 141
Msa0469800 MtrunA17_Chr4g0039791 29.825 342 166 14 248 579 204 481 4.70e-25 110
Msa0469800 MtrunA17_Chr5g0409791 27.160 486 258 20 115 579 78 488 1.44e-24 108
Msa0469800 MtrunA17_Chr1g0157401 27.697 343 174 13 248 581 205 482 1.31e-20 96.3
Msa0469800 MtrunA17_Chr5g0409771 24.089 494 279 18 106 584 68 480 2.23e-19 92.4
Msa0469800 MtrunA17_Chr6g0471921 24.008 479 280 15 106 577 32 433 6.45e-17 84.3
Msa0469800 MtrunA17_Chr1g0197391 26.087 345 178 14 247 581 211 488 2.84e-16 82.8
Msa0469800 MtrunA17_Chr3g0109731 27.224 371 174 14 254 608 194 484 1.97e-15 80.1
Msa0469800 MtrunA17_Chr5g0433231 29.804 255 133 9 441 682 322 543 1.00e-14 77.8
Msa0469800 MtrunA17_Chr5g0433241 49.398 83 36 3 500 582 391 467 2.00e-13 73.6
Msa0469800 MtrunA17_Chr2g0334131 27.530 247 149 10 419 646 45 280 7.39e-13 69.7
Msa0469800 MtrunA17_Chr2g0327341 28.512 242 131 11 419 649 304 514 1.16e-12 70.9
Msa0469800 MtrunA17_Chr5g0396311 27.089 347 175 14 248 581 182 463 1.30e-12 70.9
Msa0469800 MtrunA17_Chr1g0180541 28.191 188 113 8 407 583 296 472 1.36e-12 70.9
Msa0469800 MtrunA17_Chr4g0028411 29.384 211 116 8 445 649 334 517 1.84e-12 70.5
Msa0469800 MtrunA17_Chr5g0433221 30.601 183 97 6 500 682 391 543 5.07e-12 68.9
Msa0469800 MtrunA17_Chr6g0471311 29.947 187 101 6 500 686 393 549 5.35e-12 68.9
Msa0469800 MtrunA17_Chr1g0180551 30.488 164 101 6 425 583 390 545 1.56e-11 67.8
Msa0469800 MtrunA17_Chr5g0395431 28.571 245 150 11 419 647 349 584 2.14e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0469800 AT1G77590.1 73.055 694 183 2 1 693 1 691 0.0 1092
Msa0469800 AT2G04350.2 64.339 673 237 1 24 693 48 720 0.0 913
Msa0469800 AT2G04350.1 64.339 673 237 1 24 693 48 720 0.0 913
Msa0469800 AT1G77590.2 75.686 547 130 1 147 693 2 545 0.0 889
Msa0469800 AT5G27600.1 36.318 603 350 12 100 694 113 689 9.99e-122 379
Msa0469800 AT3G05970.1 35.257 641 375 10 56 692 83 687 9.01e-117 366
Msa0469800 AT4G23850.1 32.569 654 386 17 54 692 42 655 4.09e-101 324
Msa0469800 AT1G64400.1 32.198 646 389 14 61 694 49 657 9.72e-100 320
Msa0469800 AT2G47240.1 31.336 651 398 12 56 694 41 654 6.12e-95 308
Msa0469800 AT2G47240.2 31.336 651 398 12 56 694 41 654 6.12e-95 308
Msa0469800 AT2G47240.3 31.336 651 398 12 56 694 41 654 6.12e-95 308
Msa0469800 AT4G11030.1 31.279 649 401 14 54 692 42 655 6.52e-95 308
Msa0469800 AT2G47240.4 32.085 614 382 11 93 694 5 595 1.12e-93 303
Msa0469800 AT1G49430.1 31.631 607 382 10 100 694 74 659 1.15e-92 302
Msa0469800 AT1G49430.2 32.080 452 274 10 100 539 74 504 2.97e-60 211
Msa0469800 AT3G23790.1 25.816 643 387 23 107 692 112 721 1.84e-39 155
Msa0469800 AT4G14070.1 25.697 646 377 22 106 693 127 727 2.29e-37 149
Msa0469800 AT4G19010.1 29.532 342 171 14 248 581 205 484 3.54e-25 110
Msa0469800 AT1G20500.1 27.679 336 176 11 248 579 198 470 1.11e-22 103
Msa0469800 AT1G20510.2 28.198 344 174 12 248 583 190 468 6.16e-21 97.1
Msa0469800 AT1G20510.1 28.529 340 170 12 248 579 190 464 1.17e-20 96.7
Msa0469800 AT1G20510.3 27.950 322 160 11 248 561 190 447 7.97e-19 90.5
Msa0469800 AT1G21540.1 28.324 346 165 13 251 581 191 468 7.42e-17 84.7
Msa0469800 AT5G38120.3 26.254 339 175 15 248 579 200 470 1.06e-15 80.9
Msa0469800 AT5G38120.4 26.254 339 175 15 248 579 200 470 1.20e-15 80.5
Msa0469800 AT5G38120.2 26.254 339 175 15 248 579 200 470 1.20e-15 80.5
Msa0469800 AT5G38120.1 26.254 339 175 15 248 579 200 470 1.37e-15 80.9
Msa0469800 AT5G16340.1 32.075 212 114 7 478 689 369 550 2.14e-15 80.1
Msa0469800 AT5G16370.1 30.194 361 158 15 248 588 186 472 3.33e-15 79.7
Msa0469800 AT1G75960.1 31.959 194 104 6 480 673 371 536 9.32e-15 78.2
Msa0469800 AT4G05160.1 28.033 239 136 9 419 649 309 519 6.36e-14 75.5
Msa0469800 AT1G77240.1 48.780 82 37 2 500 581 390 466 4.77e-13 72.8
Msa0469800 AT1G20480.1 33.537 164 92 7 422 579 333 485 5.71e-13 72.4
Msa0469800 AT1G21530.2 31.250 192 108 7 404 581 284 465 6.52e-13 72.4
Msa0469800 AT3G48990.1 31.361 169 98 5 418 581 281 436 6.75e-13 72.0
Msa0469800 AT1G21530.1 34.839 155 79 6 441 581 317 463 2.31e-12 70.5
Msa0469800 AT1G62940.1 25.348 359 177 15 245 584 179 465 4.80e-12 69.7
Msa0469800 AT3G21240.1 27.344 256 137 13 419 646 316 550 1.23e-11 68.2
Msa0469800 AT1G65880.1 30.233 258 134 11 422 660 305 535 3.66e-11 66.6
Msa0469800 AT3G21230.1 26.423 246 153 10 419 647 331 565 6.80e-11 65.9

Find 193 sgRNAs with CRISPR-Local

Find 667 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTGGTGGTGCACCCCTTTC+TGG 0.130378 3_3:-71787499 Msa0469800:CDS
AATTGATAAACATGGTAAAA+AGG 0.232096 3_3:+71780768 None:intergenic
ATGTGGGATGGTTCTTAAAT+TGG 0.239460 3_3:+71790819 None:intergenic
TGGTAGCTGGTTTGGTGCTT+GGG 0.253560 3_3:-71787602 Msa0469800:CDS
TTCTCCCAACGAAGCATAAA+TGG 0.267608 3_3:+71789987 None:intergenic
TTAACATATGTGGAAGGTTT+TGG 0.268361 3_3:+71785761 None:intergenic
TTTGAAAACACAACATTAGA+TGG 0.286308 3_3:-71790797 Msa0469800:five_prime_UTR
CCGCAAACGCCGCGGCTTAC+CGG 0.287825 3_3:-71790508 Msa0469800:CDS
AGAATGGTTTATTGCATTGC+AGG 0.308254 3_3:-71790151 Msa0469800:intron
GCCGCGGCGTTTGCGGTTGT+TGG 0.320837 3_3:+71790515 None:intergenic
CTCATCCTGCATTGGATGAA+TGG 0.328825 3_3:-71781840 Msa0469800:CDS
ACTCAAGTTATTTAACAGTT+TGG 0.330171 3_3:+71780812 None:intergenic
GATGTATCGGTTAGAGTTAA+TGG 0.330847 3_3:+71787894 None:intergenic
CAGGTTGAGGCAGTTCTTCT+TGG 0.331599 3_3:-71781937 Msa0469800:CDS
ATGAGTAACCATTCCGAGTT+TGG 0.332983 3_3:+71780924 None:intergenic
CTGGTTTGGTGCTTGGGGAT+TGG 0.338123 3_3:-71787596 Msa0469800:CDS
CGAAGGATGCAAGCGATTAA+TGG 0.338298 3_3:-71787622 Msa0469800:CDS
TGAGATCATTGATAGGAAAA+AGG 0.339564 3_3:-71782070 Msa0469800:CDS
TGCTGTAAAGGTTGATGAAC+GGG 0.340717 3_3:-71782148 Msa0469800:intron
TGTTTGTTCAGGCTTGCTTC+AGG 0.342021 3_3:-71790029 Msa0469800:intron
ACATCCTTTGTCCCAAGTTC+AGG 0.343319 3_3:+71788115 None:intergenic
ATGGTAGCTGGTTTGGTGCT+TGG 0.343553 3_3:-71787603 Msa0469800:CDS
AAATCACTTGTAAATATTGC+TGG 0.347751 3_3:-71788587 Msa0469800:CDS
TCTTCTTGGCAGCCCCTTTG+TGG 0.359980 3_3:-71781923 Msa0469800:CDS
AATAACAAGAGAAAAGGTTT+TGG 0.360047 3_3:+71790714 None:intergenic
GCTTCTGGTTTGGCGAAGAT+TGG 0.360072 3_3:-71790219 Msa0469800:CDS
AGACCATATGCTTGACCTAT+TGG 0.362678 3_3:+71785851 None:intergenic
TGAATTGATCTCACGTGAAA+TGG 0.368695 3_3:-71790337 Msa0469800:CDS
GCGATTAATGGTAGCTGGTT+TGG 0.369688 3_3:-71787610 Msa0469800:CDS
TCATCCTGCATTGGATGAAT+GGG 0.370904 3_3:-71781839 Msa0469800:CDS
ATTAATGTTCATAATTCAAT+TGG 0.381560 3_3:+71790757 None:intergenic
GGCTGTTTCTCATCCTGCAT+TGG 0.384325 3_3:-71781848 Msa0469800:CDS
GCTGCTGTTGGAGGCTGTAT+AGG 0.394725 3_3:-71787927 Msa0469800:CDS
AGATTCATCAACATTTGTCT+TGG 0.406370 3_3:-71787466 Msa0469800:CDS
ACAATGAACGCCTACATTGC+CGG 0.408215 3_3:-71790576 Msa0469800:CDS
CCGGTAAGCCGCGGCGTTTG+CGG 0.410043 3_3:+71790508 None:intergenic
GTGAAAATTGTTCCTGAACT+TGG 0.412273 3_3:-71788127 Msa0469800:CDS
GATTCATCAACATTTGTCTT+GGG 0.413381 3_3:-71787465 Msa0469800:intron
AACTGCAACATCAGCTGAAA+GGG 0.414993 3_3:+71788421 None:intergenic
CCTCGTGGTGAAATAGTAAT+TGG 0.418609 3_3:-71784568 Msa0469800:CDS
GTAGTTGAATATCCACCTTC+AGG 0.419524 3_3:+71784604 None:intergenic
GGAAGCAAAGAAGGCTCGTC+TGG 0.420989 3_3:-71781099 Msa0469800:CDS
GTTGAAAACAAAGTAGTAAT+GGG 0.422478 3_3:+71790624 None:intergenic
TAGAATTTGTTTGCTGCTGT+TGG 0.423659 3_3:-71787939 Msa0469800:CDS
AAAGAAGTAGCTCCTTTCAC+TGG 0.428483 3_3:+71780900 None:intergenic
AACATAATGTTGTCCACAAA+GGG 0.431416 3_3:+71781910 None:intergenic
TTCATCTTGGAGAGTATCAA+TGG 0.436487 3_3:-71790281 Msa0469800:CDS
GCCGACGTCGGCGGCGAACC+TGG 0.444746 3_3:-71790486 Msa0469800:CDS
AAAACCTTCCACATATGTTA+AGG 0.446570 3_3:-71785759 Msa0469800:intron
GTGGTCCAAGTGTCACTCTT+GGG 0.449191 3_3:-71784546 Msa0469800:CDS
GACCCATGGACTCCTGAGAC+TGG 0.453555 3_3:-71781038 Msa0469800:CDS
AATTTGTTTGCTGCTGTTGG+AGG 0.455909 3_3:-71787936 Msa0469800:CDS
GTTACCATTTATGCTTCGTT+GGG 0.457080 3_3:-71789991 Msa0469800:CDS
TTTCGGTCGTAATTTATCTC+AGG 0.457430 3_3:-71780745 Msa0469800:three_prime_UTR
TGTTACCATTTATGCTTCGT+TGG 0.470259 3_3:-71789992 Msa0469800:CDS
TCTTTGTGAGTCACCAGAAA+GGG 0.471719 3_3:+71787486 None:intergenic
TTTGTGTCATTCATTGAATG+AGG 0.476608 3_3:-71789959 Msa0469800:intron
CCGCATCTGCTCAGCATGGA+TGG 0.477689 3_3:-71788508 Msa0469800:CDS
GCAGTAACTAGGCCAGTCTC+AGG 0.478808 3_3:+71781026 None:intergenic
GATGAAGAAAGGTTTATGAA+TGG 0.479275 3_3:+71790650 None:intergenic
GTTGCCTTGAGATCATTGAT+AGG 0.484550 3_3:-71782077 Msa0469800:CDS
TTAAATTGCTTTCTGACCCA+TGG 0.484569 3_3:-71781052 Msa0469800:CDS
GGTTCGCCGCCGACGTCGGC+CGG 0.487708 3_3:+71790489 None:intergenic
TGGTTGCGGACCGCGAAACC+AGG 0.488283 3_3:+71790468 None:intergenic
AAGTTCGAGAAGCTTCATCT+TGG 0.494487 3_3:-71790294 Msa0469800:CDS
TCTTAAGAGCTGCAGTAACT+AGG 0.495063 3_3:+71781015 None:intergenic
AGGCCAGTCTCAGGAGTCCA+TGG 0.497067 3_3:+71781035 None:intergenic
GGTAGCTGGTTTGGTGCTTG+GGG 0.497596 3_3:-71787601 Msa0469800:CDS
CCTTCCCAGAGTGAAGTTAA+CGG 0.498435 3_3:+71790432 None:intergenic
TGAAAGCAATGTAGAAAGAG+TGG 0.500301 3_3:+71790685 None:intergenic
CGAACACGATCAAGAATTGC+TGG 0.500340 3_3:+71787804 None:intergenic
AGTTGAAAACAAAGTAGTAA+TGG 0.500380 3_3:+71790623 None:intergenic
GAGTATCAATGGGTTACGTA+TGG 0.500959 3_3:-71790270 Msa0469800:CDS
TGCAAGCGATTAATGGTAGC+TGG 0.501413 3_3:-71787615 Msa0469800:CDS
GGTTGTTGGAGTTGCGGAAG+AGG 0.502140 3_3:+71790529 None:intergenic
AAGCCTTTCAACATCAGAAA+AGG 0.502433 3_3:+71788475 None:intergenic
TGAAAATTGTTCCTGAACTT+GGG 0.504500 3_3:-71788126 Msa0469800:CDS
CGCGGCTTACCGGCCGACGT+CGG 0.506121 3_3:-71790498 Msa0469800:CDS
GAAATGGAAACTTCTTCTGA+TGG 0.507585 3_3:-71790321 Msa0469800:CDS
GGTGGTCCAAGTGTCACTCT+TGG 0.507960 3_3:-71784547 Msa0469800:CDS
AAGTTACTGTGTGGCACTTG+TGG 0.512481 3_3:-71781869 Msa0469800:CDS
AATAACTACCTTAACATATG+TGG 0.514991 3_3:+71785751 None:intergenic
GTAATGGGAGTGATGAAGAA+AGG 0.515010 3_3:+71790639 None:intergenic
GGCTTACCGGCCGACGTCGG+CGG 0.515433 3_3:-71790495 Msa0469800:CDS
CATCTCCGTTAACTTCACTC+TGG 0.517195 3_3:-71790437 Msa0469800:CDS
GAGATGTGACGCGGTGGTTG+CGG 0.517808 3_3:+71790454 None:intergenic
TACGACCACCCAGAATTGCT+TGG 0.517811 3_3:+71787536 None:intergenic
AGGTTGATGAACGGGGAATG+AGG 0.520598 3_3:-71782140 Msa0469800:CDS
TGAGCAGATGCGGCATCAGA+TGG 0.520910 3_3:+71788518 None:intergenic
AAAACACAACATTAGATGGA+TGG 0.524033 3_3:-71790793 Msa0469800:five_prime_UTR
CGGCGGCGAACCTGGTTTCG+CGG 0.524349 3_3:-71790478 Msa0469800:CDS
TGTTCCTGAACTTGGGACAA+AGG 0.527275 3_3:-71788119 Msa0469800:CDS
AATTCAAGAATATGAGCCAT+TGG 0.527773 3_3:+71788076 None:intergenic
GCATGGAGAATATGTGTCCC+TGG 0.530319 3_3:-71782031 Msa0469800:CDS
GCTCCAATAGGTCAAGCATA+TGG 0.531681 3_3:-71785854 Msa0469800:CDS
AACGATGAGGCCGGCAATGT+AGG 0.531894 3_3:+71790566 None:intergenic
AGGGGTAAATCAGCCTCGAT+AGG 0.532424 3_3:+71788440 None:intergenic
CGTGCATGCATACCTTTCCC+AGG 0.533958 3_3:+71782013 None:intergenic
CGCTTGCATCCTTCGTGCAT+AGG 0.534962 3_3:+71787630 None:intergenic
GTCATACAGGTAAATGCAAA+GGG 0.535324 3_3:-71787682 Msa0469800:intron
CGACGTCGGCCGGTAAGCCG+CGG 0.536999 3_3:+71790499 None:intergenic
ATATTTGCAGGAAGCAAAGA+AGG 0.537806 3_3:-71781108 Msa0469800:intron
ATCTTTGTGAGTCACCAGAA+AGG 0.538336 3_3:+71787485 None:intergenic
ATGCTGACACTAGAGAAGAA+TGG 0.546458 3_3:-71790167 Msa0469800:CDS
GTTTGGTAATCTACTCAACT+AGG 0.546922 3_3:+71780829 None:intergenic
TAACTGCAACATCAGCTGAA+AGG 0.546955 3_3:+71788420 None:intergenic
ATTCTTGATCGTGTTCGTGA+TGG 0.547019 3_3:-71787798 Msa0469800:CDS
ATGTACACAAGTGGAAGTAC+AGG 0.547355 3_3:-71788395 Msa0469800:CDS
CAAGTGATTTCAATTCTTTG+CGG 0.548594 3_3:+71788600 None:intergenic
GAAGCCCATTCATCCAATGC+AGG 0.549662 3_3:+71781835 None:intergenic
ACCAGGTTCGCCGCCGACGT+CGG 0.550810 3_3:+71790485 None:intergenic
CAGTTAATCGACTGGCCTGA+AGG 0.550964 3_3:-71784619 Msa0469800:CDS
GGTGCATGCATCACTTGTAA+AGG 0.552621 3_3:-71781749 Msa0469800:intron
AGTATCAATGGGTTACGTAT+GGG 0.553654 3_3:-71790269 Msa0469800:CDS
CCATCCATGCTGAGCAGATG+CGG 0.554020 3_3:+71788508 None:intergenic
TCATCTTGGAGAGTATCAAT+GGG 0.554276 3_3:-71790280 Msa0469800:CDS
CAACATAATGTTGTCCACAA+AGG 0.555949 3_3:+71781909 None:intergenic
GATGAATGGGCTTCAAAGCA+AGG 0.558170 3_3:-71781826 Msa0469800:CDS
GGCGGAAATAACAAGAGAAA+AGG 0.559134 3_3:+71790708 None:intergenic
CTCACGGAGACTTGTGCTGG+TGG 0.563040 3_3:-71785830 Msa0469800:CDS
GTTGGAGGCTGTATAGGATA+CGG 0.563483 3_3:-71787921 Msa0469800:CDS
CAAATAGACAAAACCAAACT+CGG 0.567418 3_3:-71780937 Msa0469800:exon
TTGCTGTAAAGGTTGATGAA+CGG 0.570020 3_3:-71782149 Msa0469800:intron
GAAAGCAATGTAGAAAGAGT+GGG 0.570023 3_3:+71790686 None:intergenic
ACTATTTCACCACGAGGCAT+CGG 0.570238 3_3:+71784574 None:intergenic
GACGAGAGGAACGATGAGGC+CGG 0.570309 3_3:+71790557 None:intergenic
ATCTCCGTTAACTTCACTCT+GGG 0.571471 3_3:-71790436 Msa0469800:CDS
GATACTTCTGTTGGCCGTGT+AGG 0.572271 3_3:-71785788 Msa0469800:CDS
GTAGGTAGATTTCATGCGGA+TGG 0.573162 3_3:-71782099 Msa0469800:CDS
AGACAAAACCAAACTCGGAA+TGG 0.579060 3_3:-71780932 Msa0469800:three_prime_UTR
TGGTTACTCATCCCAGTGAA+AGG 0.579672 3_3:-71780912 Msa0469800:three_prime_UTR
AGAATATGTGTCCCTGGGAA+AGG 0.579752 3_3:-71782025 Msa0469800:intron
AAGAAGTAGCTCCTTTCACT+GGG 0.580914 3_3:+71780901 None:intergenic
CGTGGTGAAATAGTAATTGG+TGG 0.584455 3_3:-71784565 Msa0469800:CDS
GGTCTCACGGAGACTTGTGC+TGG 0.586067 3_3:-71785833 Msa0469800:CDS
GGGGTAAATCAGCCTCGATA+GGG 0.587669 3_3:+71788441 None:intergenic
GGTCATACAGGTAAATGCAA+AGG 0.587700 3_3:-71787683 Msa0469800:intron
GTTTGCGGTTGTTGGAGTTG+CGG 0.591559 3_3:+71790523 None:intergenic
TGGAAGTACAGGCTTGCCTA+AGG 0.592424 3_3:-71788384 Msa0469800:intron
TGTTGGAGTTGCGGAAGAGG+AGG 0.592784 3_3:+71790532 None:intergenic
CATGGAGAATATGTGTCCCT+GGG 0.602792 3_3:-71782030 Msa0469800:CDS
GAGCAGATGCGGCATCAGAT+GGG 0.603021 3_3:+71788519 None:intergenic
GACATAGTTAAACTGCAGCA+TGG 0.605290 3_3:-71782048 Msa0469800:CDS
TTAATCGACTGGCCTGAAGG+TGG 0.607384 3_3:-71784616 Msa0469800:CDS
GAGGTTACAACTGTGATTTG+TGG 0.608937 3_3:-71788623 Msa0469800:CDS
CCGTTAACTTCACTCTGGGA+AGG 0.609584 3_3:-71790432 Msa0469800:CDS
GCAGTTATAATGTACACAAG+TGG 0.611172 3_3:-71788404 Msa0469800:CDS
CAAAGAAGAAACAGTGAAGG+AGG 0.611493 3_3:-71781770 Msa0469800:CDS
AAATACCCAAGAGTGACACT+TGG 0.612420 3_3:+71784541 None:intergenic
AGGTCAAGCATATGGTCTCA+CGG 0.613030 3_3:-71785846 Msa0469800:CDS
TGCATTGATGCCAACTGTGT+TGG 0.613469 3_3:-71787835 Msa0469800:CDS
GGCCAGTCTCAGGAGTCCAT+GGG 0.614285 3_3:+71781036 None:intergenic
TTTGGTAATCTACTCAACTA+GGG 0.614607 3_3:+71780830 None:intergenic
TGCAAAGGGAGGATTATCAA+AGG 0.615510 3_3:-71787668 Msa0469800:CDS
TCAATGGGTTACGTATGGGA+AGG 0.616385 3_3:-71790265 Msa0469800:CDS
GGAATGAGGTGGTTCTACAC+TGG 0.617625 3_3:-71782126 Msa0469800:CDS
ACTACCTTAACATATGTGGA+AGG 0.619062 3_3:+71785755 None:intergenic
GGTACAGCTACCAACACAGT+TGG 0.622382 3_3:+71787825 None:intergenic
TCACGGAGACTTGTGCTGGT+GGG 0.623476 3_3:-71785829 Msa0469800:CDS
CACAGTTGGCATCAATGCAG+TGG 0.624128 3_3:+71787839 None:intergenic
ATATCTAGCATACTTACCAA+TGG 0.624262 3_3:-71788092 Msa0469800:CDS
GATGCCGCATCTGCTCAGCA+TGG 0.624263 3_3:-71788512 Msa0469800:CDS
TATTCTTGAATTAATAGCTG+AGG 0.625070 3_3:-71788065 Msa0469800:intron
AAAGACAAGAGAGTCTTACA+AGG 0.625891 3_3:-71784506 Msa0469800:intron
GCTGTAAAGGTTGATGAACG+GGG 0.640469 3_3:-71782147 Msa0469800:intron
TCCAACAACCGCAAACGCCG+CGG 0.640799 3_3:-71790516 Msa0469800:CDS
CAGCAAAGAAGAAACAGTGA+AGG 0.640861 3_3:-71781773 Msa0469800:CDS
CTTTGTGAGTCACCAGAAAG+GGG 0.655656 3_3:+71787487 None:intergenic
AATCATGATAGATTGTTACT+CGG 0.656134 3_3:-71790366 Msa0469800:CDS
TCTAACCGATACATCAAACA+AGG 0.656429 3_3:-71787886 Msa0469800:CDS
TTGATTTAGCCTATGCACGA+AGG 0.657974 3_3:-71787639 Msa0469800:CDS
GGTAATCTACTCAACTAGGG+TGG 0.659698 3_3:+71780833 None:intergenic
ACTGCAACATCAGCTGAAAG+GGG 0.666737 3_3:+71788422 None:intergenic
GTGCATGCATACCTTTCCCA+GGG 0.668654 3_3:+71782014 None:intergenic
TGGTAGAGAAAACCCTATCG+AGG 0.672136 3_3:-71788453 Msa0469800:CDS
GGAAGGCGTGACGACACTCG+CGG 0.672398 3_3:-71790415 Msa0469800:CDS
CGGAAGAGGAGGATGACGAG+AGG 0.672962 3_3:+71790543 None:intergenic
TGGTTCTACACTGGTGACGT+AGG 0.683274 3_3:-71782117 Msa0469800:CDS
CCAATTACTATTTCACCACG+AGG 0.684364 3_3:+71784568 None:intergenic
TGACGTAGGTAGATTTCATG+CGG 0.690923 3_3:-71782103 Msa0469800:CDS
GGACAACATTATGTTGCATG+CGG 0.691477 3_3:-71781902 Msa0469800:CDS
AAAATACATAACCGTCCCAG+AGG 0.700873 3_3:+71780869 None:intergenic
CAGGGTGTGATGATGACACA+TGG 0.701230 3_3:-71788178 Msa0469800:CDS
ACTGACTCACCGATGCCTCG+TGG 0.702074 3_3:-71784583 Msa0469800:CDS
AAAGCAATGTAGAAAGAGTG+GGG 0.704149 3_3:+71790687 None:intergenic
ATACAGGTAAATGCAAAGGG+AGG 0.708230 3_3:-71787679 Msa0469800:intron
ACATAATGTTGTCCACAAAG+GGG 0.710014 3_3:+71781911 None:intergenic
TTGATGAACGGGGAATGAGG+TGG 0.714142 3_3:-71782137 Msa0469800:CDS
GGATGACGAGAGGAACGATG+AGG 0.715004 3_3:+71790553 None:intergenic
TTAACGGAGATGTGACGCGG+TGG 0.729075 3_3:+71790448 None:intergenic
AAGTTAACGGAGATGTGACG+CGG 0.733202 3_3:+71790445 None:intergenic
AAGGTCCAAGCAATTCTGGG+TGG 0.739493 3_3:-71787541 Msa0469800:CDS
GCAATGTAGAAAGAGTGGGG+CGG 0.808588 3_3:+71790690 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATAATAAATAAATTT+AGG + chr3_3:71786156-71786175 None:intergenic 0.0%
!!! AATCTTTGTTATAAAAATTT+TGG - chr3_3:71782142-71782161 Msa0469800:intron 10.0%
!!! CATTTTGAAAATAATTTTTA+TGG - chr3_3:71782355-71782374 Msa0469800:intron 10.0%
!! TTATAAAAATAAAAAGAGAA+AGG + chr3_3:71782565-71782584 None:intergenic 10.0%
!!! TCCTTTTTAATAATAAAATA+AGG - chr3_3:71784143-71784162 Msa0469800:intron 10.0%
!! GAATATAAGTAAAAAAATAA+AGG + chr3_3:71784188-71784207 None:intergenic 10.0%
!! AGAAAAAAATAATAATATGT+GGG + chr3_3:71785660-71785679 None:intergenic 10.0%
!! AAGAAAAAAATAATAATATG+TGG + chr3_3:71785661-71785680 None:intergenic 10.0%
!! TATTAGGAAAAAAAAATATT+AGG + chr3_3:71786691-71786710 None:intergenic 10.0%
!! TAATAACAAATAACAATAAA+TGG + chr3_3:71787531-71787550 None:intergenic 10.0%
!!! TCATTTTATTTATTCTATTT+TGG - chr3_3:71787553-71787572 Msa0469800:CDS 10.0%
!!! CATTTTATTTATTCTATTTT+GGG - chr3_3:71787554-71787573 Msa0469800:CDS 10.0%
!!! TTCATAATTATGTTTTTTTT+TGG - chr3_3:71787848-71787867 Msa0469800:CDS 10.0%
!!! TCATAATTATGTTTTTTTTT+GGG - chr3_3:71787849-71787868 Msa0469800:CDS 10.0%
!! ATTAATGTTCATAATTCAAT+TGG + chr3_3:71780818-71780837 None:intergenic 15.0%
!!! ATATAATTAGGATACTTTTA+GGG + chr3_3:71781780-71781799 None:intergenic 15.0%
!!! TATATAATTAGGATACTTTT+AGG + chr3_3:71781781-71781800 None:intergenic 15.0%
!!! TGTATAAAAAAGTATTTTAC+TGG - chr3_3:71781806-71781825 Msa0469800:CDS 15.0%
!! TTTAAATTCAAGATATGATA+TGG + chr3_3:71782181-71782200 None:intergenic 15.0%
!!! GCCTTATTTTATTATTAAAA+AGG + chr3_3:71784147-71784166 None:intergenic 15.0%
!! AAAAATAAAGAAATACCATT+AGG - chr3_3:71784251-71784270 Msa0469800:intron 15.0%
!! AAAATAAAGAAATACCATTA+GGG - chr3_3:71784252-71784271 Msa0469800:intron 15.0%
!!! AACTTAACTTACTTTAATTT+GGG + chr3_3:71784802-71784821 None:intergenic 15.0%
!! AAACTTAACTTACTTTAATT+TGG + chr3_3:71784803-71784822 None:intergenic 15.0%
!!! TAAAGTAAGTTAAGTTTTTT+CGG - chr3_3:71784806-71784825 Msa0469800:intron 15.0%
!!! TTCATTTTTTTTTTTTCAGA+AGG + chr3_3:71785535-71785554 None:intergenic 15.0%
!!! TTATAACTGACAATAAATTT+TGG + chr3_3:71786203-71786222 None:intergenic 15.0%
!! TTGAATAAAACATTATTTGA+TGG + chr3_3:71786354-71786373 None:intergenic 15.0%
!!! TTTATTATTTTTGTTGAAGA+TGG + chr3_3:71786587-71786606 None:intergenic 15.0%
!! AAGAAAAAGAAGAATAAAAA+AGG + chr3_3:71787106-71787125 None:intergenic 15.0%
!!! TTGGATTGTTTATTTTATTT+AGG - chr3_3:71787474-71787493 Msa0469800:CDS 15.0%
!!! TATTTAGGCTTTTAATTTTT+AGG - chr3_3:71787489-71787508 Msa0469800:CDS 15.0%
!!! TTGGATTGTTTATTTTATTT+AGG - chr3_3:71787474-71787493 Msa0469800:CDS 15.0%
!!! TATGACATTTTATTCTATTT+TGG - chr3_3:71787898-71787917 Msa0469800:CDS 15.0%
!!! ATGACATTTTATTCTATTTT+GGG - chr3_3:71787899-71787918 Msa0469800:CDS 15.0%
!!! TAATAATTGAAGGATAATTT+TGG + chr3_3:71788102-71788121 None:intergenic 15.0%
!!! AATCTTTGATATCAAATTTT+AGG + chr3_3:71788499-71788518 None:intergenic 15.0%
!!! ATTTAATTAAATTAGTCTTC+AGG + chr3_3:71789614-71789633 None:intergenic 15.0%
!! AGACTAATTTAATTAAATAC+AGG - chr3_3:71789616-71789635 Msa0469800:intron 15.0%
!!! ACTTTTTTTGTTATTAGAAA+AGG - chr3_3:71789902-71789921 Msa0469800:intron 15.0%
!! AACAGTAAAATTTAAACTTA+AGG - chr3_3:71789942-71789961 Msa0469800:intron 15.0%
!!! ATTTTTATGAAAATATTTGC+AGG - chr3_3:71790452-71790471 Msa0469800:CDS 15.0%
!!! AATTCAATTGGTTTTATCAT+CGG + chr3_3:71780806-71780825 None:intergenic 20.0%
!!! TTTTGAAATTTGAACTTAGA+TGG - chr3_3:71781492-71781511 Msa0469800:intron 20.0%
!!! TACATTTTTTTTGTTTGTTC+AGG - chr3_3:71781532-71781551 Msa0469800:intron 20.0%
!!! AAAATTTTGGTAACGTATAT+AGG - chr3_3:71782155-71782174 Msa0469800:intron 20.0%
!!! ATTTTCAAAATGACATGAAA+GGG + chr3_3:71782347-71782366 None:intergenic 20.0%
!!! TATTTTCAAAATGACATGAA+AGG + chr3_3:71782348-71782367 None:intergenic 20.0%
!!! AAGTTTTAAAGTTTATTTGC+CGG - chr3_3:71782640-71782659 Msa0469800:intron 20.0%
!!! TACTTTTAGATTTGTGTTTA+TGG - chr3_3:71782788-71782807 Msa0469800:intron 20.0%
!!! ACTTTTAGATTTGTGTTTAT+GGG - chr3_3:71782789-71782808 Msa0469800:intron 20.0%
!! ACAGTAAAATGAAGAAAAAA+AGG + chr3_3:71783350-71783369 None:intergenic 20.0%
!! ATAAGGCTAAAAATATTCTT+TGG - chr3_3:71784160-71784179 Msa0469800:intron 20.0%
!! TAAGGCTAAAAATATTCTTT+GGG - chr3_3:71784161-71784180 Msa0469800:intron 20.0%
!! TTCATAGTCTAAACTTTAAA+AGG + chr3_3:71784498-71784517 None:intergenic 20.0%
!!! TTTTATACGTTAGAATTTCT+TGG + chr3_3:71784766-71784785 None:intergenic 20.0%
!!! AACTTCTGAGTTTTATATTT+TGG + chr3_3:71784847-71784866 None:intergenic 20.0%
!!! TTTTTTTTAAAGGAGCAAAA+TGG - chr3_3:71785086-71785105 Msa0469800:intron 20.0%
!! ATAATAAATCTCACTTTCTA+TGG - chr3_3:71785454-71785473 Msa0469800:intron 20.0%
!! TAATAAATCTCACTTTCTAT+GGG - chr3_3:71785455-71785474 Msa0469800:intron 20.0%
!! AAAAAAAATGAAATTCACTC+AGG - chr3_3:71785543-71785562 Msa0469800:intron 20.0%
!! AAAAAATAATAATATGTGGG+TGG + chr3_3:71785657-71785676 None:intergenic 20.0%
!!! ATTCACACATTTTAAATTCA+AGG - chr3_3:71785856-71785875 Msa0469800:CDS 20.0%
!!! TTCACACATTTTAAATTCAA+GGG - chr3_3:71785857-71785876 Msa0469800:CDS 20.0%
!! AATAAATAAATTTAGGAACC+AGG + chr3_3:71786149-71786168 None:intergenic 20.0%
!! ATTAATCCTCAACTTATATA+TGG - chr3_3:71786281-71786300 Msa0469800:intron 20.0%
!! TTAATCCTCAACTTATATAT+GGG - chr3_3:71786282-71786301 Msa0469800:intron 20.0%
!! AGAAAATAAGTGATAGAAAT+GGG - chr3_3:71786378-71786397 Msa0469800:intron 20.0%
!!! ATAATATTGTTGTCTCTTTT+TGG + chr3_3:71786417-71786436 None:intergenic 20.0%
!!! TATTATTTGTCACTCATTTT+GGG + chr3_3:71786759-71786778 None:intergenic 20.0%
!!! TTTTATTCTTCTTTTTCTTG+TGG - chr3_3:71787107-71787126 Msa0469800:intron 20.0%
!!! TTGAATTTTAACACAATGTT+AGG - chr3_3:71787683-71787702 Msa0469800:intron 20.0%
!! ATAATAAACCTATCACATTA+AGG + chr3_3:71787761-71787780 None:intergenic 20.0%
!!! GGTTTATTATTTAGAACATT+TGG - chr3_3:71787771-71787790 Msa0469800:intron 20.0%
!!! GAATGTTTTACATCTATAAA+TGG - chr3_3:71787967-71787986 Msa0469800:intron 20.0%
!! ATTTCTCTCTTAATAATTGA+AGG + chr3_3:71788112-71788131 None:intergenic 20.0%
!! ATTATTAAGAGAGAAATGAT+TGG - chr3_3:71788115-71788134 Msa0469800:CDS 20.0%
!! TTAATTATCTTCATCTAATC+CGG - chr3_3:71788142-71788161 Msa0469800:CDS 20.0%
!!! AAGATTAATTTTGATTCACT+TGG - chr3_3:71788513-71788532 Msa0469800:CDS 20.0%
!!! CAAAGAAATATTGGAATTTT+TGG + chr3_3:71788609-71788628 None:intergenic 20.0%
!! AAAAAGAAGCAAAGAAATAT+TGG + chr3_3:71788618-71788637 None:intergenic 20.0%
!!! ATAATTTTCTCATTTCCAAT+AGG + chr3_3:71788643-71788662 None:intergenic 20.0%
!! TGGAAATGAGAAAATTATTA+CGG - chr3_3:71788645-71788664 Msa0469800:intron 20.0%
!! TTATAAATTCATATGTTGCA+TGG - chr3_3:71788708-71788727 Msa0469800:intron 20.0%
!! TTCACATATAAATACTCTTT+AGG - chr3_3:71789008-71789027 Msa0469800:intron 20.0%
!!! AATCAAGAATAATCTCATTT+TGG + chr3_3:71789276-71789295 None:intergenic 20.0%
!! ATGATTATTAAACTCTACAT+AGG - chr3_3:71789341-71789360 Msa0469800:intron 20.0%
!! TGATTATTAAACTCTACATA+GGG - chr3_3:71789342-71789361 Msa0469800:intron 20.0%
!! ATTTAATTAAATACAGGTTG+AGG - chr3_3:71789622-71789641 Msa0469800:intron 20.0%
!!! TAAACGGATTTTAATACAAA+AGG + chr3_3:71789853-71789872 None:intergenic 20.0%
!!! TAAAAAGTACAAAATTGACT+AGG + chr3_3:71789972-71789991 None:intergenic 20.0%
!!! GTCAATTTTGTACTTTTTAT+CGG - chr3_3:71789973-71789992 Msa0469800:CDS 20.0%
!! GTCAAACAAATATAATCTTA+GGG + chr3_3:71790016-71790035 None:intergenic 20.0%
!! AGTCAAACAAATATAATCTT+AGG + chr3_3:71790017-71790036 None:intergenic 20.0%
!! AATTGATAAACATGGTAAAA+AGG + chr3_3:71790807-71790826 None:intergenic 20.0%
!!! TACCATGTTTATCAATTTTT+CGG - chr3_3:71790810-71790829 Msa0469800:five_prime_UTR 20.0%
!! AATGTTGTGTTTTCAAATGT+GGG + chr3_3:71780772-71780791 None:intergenic 25.0%
!! TAATGTTGTGTTTTCAAATG+TGG + chr3_3:71780773-71780792 None:intergenic 25.0%
! TTTGAAAACACAACATTAGA+TGG - chr3_3:71780775-71780794 Msa0469800:three_prime_UTR 25.0%
!! AATAACAAGAGAAAAGGTTT+TGG + chr3_3:71780861-71780880 None:intergenic 25.0%
! GTTGAAAACAAAGTAGTAAT+GGG + chr3_3:71780951-71780970 None:intergenic 25.0%
! AGTTGAAAACAAAGTAGTAA+TGG + chr3_3:71780952-71780971 None:intergenic 25.0%
! AATCATGATAGATTGTTACT+CGG - chr3_3:71781206-71781225 Msa0469800:intron 25.0%
!! ATTGTTGTGTGCAAAATTTT+AGG - chr3_3:71781667-71781686 Msa0469800:intron 25.0%
! TAAAGATATACATATCCTAC+TGG - chr3_3:71782270-71782289 Msa0469800:intron 25.0%
! TAACAAGTGATATTGTTCAT+AGG - chr3_3:71782470-71782489 Msa0469800:intron 25.0%
!!! AGAACTTGTTAAAGAGAAAA+TGG + chr3_3:71782519-71782538 None:intergenic 25.0%
! AAAGTCAATTCTATTTCACA+TGG - chr3_3:71782667-71782686 Msa0469800:intron 25.0%
! CAATACTACTAGAAATTTAC+AGG + chr3_3:71782704-71782723 None:intergenic 25.0%
! GAACTAAATTACTAAAACGA+TGG + chr3_3:71782849-71782868 None:intergenic 25.0%
! AAATCACTTGTAAATATTGC+TGG - chr3_3:71782985-71783004 Msa0469800:intron 25.0%
!! GAGATATATTGTTATTCTAG+TGG - chr3_3:71783225-71783244 Msa0469800:intron 25.0%
! TATTCTTGAATTAATAGCTG+AGG - chr3_3:71783507-71783526 Msa0469800:intron 25.0%
!!! TTTTACCTTGTTTGATGTAT+CGG + chr3_3:71783694-71783713 None:intergenic 25.0%
! TACATCAAACAAGGTAAAAA+AGG - chr3_3:71783695-71783714 Msa0469800:intron 25.0%
! ACATCAAACAAGGTAAAAAA+GGG - chr3_3:71783696-71783715 Msa0469800:intron 25.0%
!! GAATTTTCTTGTCTTCAAAA+AGG - chr3_3:71784012-71784031 Msa0469800:intron 25.0%
!!! ATATGCTTTTAGCTTTTAGA+AGG + chr3_3:71784223-71784242 None:intergenic 25.0%
!! TTTTCTTCCAGTAGTATATA+AGG - chr3_3:71784336-71784355 Msa0469800:intron 25.0%
! CAACTCATGGTTAATTTATA+GGG + chr3_3:71784432-71784451 None:intergenic 25.0%
! TCAACTCATGGTTAATTTAT+AGG + chr3_3:71784433-71784452 None:intergenic 25.0%
!!! TTGTTCTTTTGATGATGAAT+CGG - chr3_3:71784586-71784605 Msa0469800:CDS 25.0%
! CAAAATAAACAGAAGTTCAT+AGG - chr3_3:71785003-71785022 Msa0469800:intron 25.0%
!!! AGCCACATGTTTTTTTTTAA+AGG - chr3_3:71785076-71785095 Msa0469800:intron 25.0%
!! CTCCTTTAAAAAAAAACATG+TGG + chr3_3:71785081-71785100 None:intergenic 25.0%
!!! TCCTTTAAGATTGTTTTTAC+CGG + chr3_3:71785167-71785186 None:intergenic 25.0%
! CAAACAAGCTAAAGTAAATA+TGG + chr3_3:71785266-71785285 None:intergenic 25.0%
! TTGTACAAAATTGAATTCCT+TGG + chr3_3:71785310-71785329 None:intergenic 25.0%
! TTGTGAATTATATGTTCAAC+TGG - chr3_3:71785413-71785432 Msa0469800:intron 25.0%
! ATTATTACTATCAACCATCA+AGG + chr3_3:71785439-71785458 None:intergenic 25.0%
! AATAACTACCTTAACATATG+TGG + chr3_3:71785824-71785843 None:intergenic 25.0%
!! GAATTTAAAATGTGTGAATG+TGG + chr3_3:71785855-71785874 None:intergenic 25.0%
!!! CTTTTACTTTTGCTGTTTAT+CGG - chr3_3:71785924-71785943 Msa0469800:intron 25.0%
! TCACAGTACTTAAATAGATA+TGG - chr3_3:71785949-71785968 Msa0469800:intron 25.0%
!! ATAAATTTTGGATTTGCATG+AGG + chr3_3:71786191-71786210 None:intergenic 25.0%
! GGATTAATGATCACAATATA+TGG + chr3_3:71786269-71786288 None:intergenic 25.0%
! GAGAAAATAAGTGATAGAAA+TGG - chr3_3:71786377-71786396 Msa0469800:intron 25.0%
!! CTATTATTTGTCACTCATTT+TGG + chr3_3:71786760-71786779 None:intergenic 25.0%
!!! AGAGTGTATTATTTCTGAAA+TGG - chr3_3:71786808-71786827 Msa0469800:intron 25.0%
!!! GAGTGTATTATTTCTGAAAT+GGG - chr3_3:71786809-71786828 Msa0469800:intron 25.0%
! AAGGTTTAGAGATGATAATA+TGG - chr3_3:71786865-71786884 Msa0469800:intron 25.0%
!! CATAAGAAATCTTTTTCCAA+AGG + chr3_3:71786911-71786930 None:intergenic 25.0%
! TCGAATATTAACACAATGTT+AGG - chr3_3:71787340-71787359 Msa0469800:intron 25.0%
!!! TGGTTTTATATCTAACAACT+GGG + chr3_3:71787387-71787406 None:intergenic 25.0%
!!! ATGGTTTTATATCTAACAAC+TGG + chr3_3:71787388-71787407 None:intergenic 25.0%
!!! GGTTTATGTTTTAGAACATT+TGG - chr3_3:71787428-71787447 Msa0469800:intron 25.0%
!! GACTGTTTTACATCTATAAA+TGG - chr3_3:71787622-71787641 Msa0469800:CDS 25.0%
!!! TGGTTTTATATCTAACAACT+GGG + chr3_3:71787387-71787406 None:intergenic 25.0%
!!! ATGGTTTTATATCTAACAAC+TGG + chr3_3:71787388-71787407 None:intergenic 25.0%
! TAATTATCTTCATCTAATCC+GGG - chr3_3:71788143-71788162 Msa0469800:CDS 25.0%
!! ATCTTTTTACAAAAGTAACC+CGG + chr3_3:71788164-71788183 None:intergenic 25.0%
!! TAGTTTGAAAAGAGTCTTAT+AGG - chr3_3:71788199-71788218 Msa0469800:intron 25.0%
!! AGTTTGAAAAGAGTCTTATA+GGG - chr3_3:71788200-71788219 Msa0469800:intron 25.0%
! TTTATATCAATCAACTATCC+AGG - chr3_3:71788388-71788407 Msa0469800:CDS 25.0%
! TTATATCAATCAACTATCCA+GGG - chr3_3:71788389-71788408 Msa0469800:CDS 25.0%
! TTATGACATTTCTTTGATTG+TGG + chr3_3:71788458-71788477 None:intergenic 25.0%
! TCTAGATGAGTATAGTATTT+GGG - chr3_3:71788685-71788704 Msa0469800:intron 25.0%
!!! CGAGATTTTTAGAAAAACTA+AGG - chr3_3:71788765-71788784 Msa0469800:intron 25.0%
!!! TTTTTAGAAAAACTAAGGCA+TGG - chr3_3:71788770-71788789 Msa0469800:intron 25.0%
!!! TTTTAGAAAAACTAAGGCAT+GGG - chr3_3:71788771-71788790 Msa0469800:intron 25.0%
! AGTATTTATATGTGAAGCAT+GGG + chr3_3:71789004-71789023 None:intergenic 25.0%
! TGTAGAGTTTAATAATCATC+TGG + chr3_3:71789340-71789359 None:intergenic 25.0%
!!! TTTTGCATTTTTTGCTGTAA+AGG - chr3_3:71789412-71789431 Msa0469800:intron 25.0%
!!! CATTACAACAAAGTTCTAAA+CGG + chr3_3:71789869-71789888 None:intergenic 25.0%
!!! GAACTTTGTTGTAATGTTTT+AGG - chr3_3:71789873-71789892 Msa0469800:intron 25.0%
! TTTGTTTGACTGTTAGAAAA+TGG - chr3_3:71790026-71790045 Msa0469800:intron 25.0%
! TTGTTTGACTGTTAGAAAAT+GGG - chr3_3:71790027-71790046 Msa0469800:intron 25.0%
! TTGCTTTGCATTAAAATATG+TGG - chr3_3:71790085-71790104 Msa0469800:intron 25.0%
! TGCTTTGCATTAAAATATGT+GGG - chr3_3:71790086-71790105 Msa0469800:intron 25.0%
!! TGATTTTTCATTCAAAAGCT+TGG - chr3_3:71790194-71790213 Msa0469800:CDS 25.0%
! AAAGTGGAATACATGAAATA+GGG + chr3_3:71790232-71790251 None:intergenic 25.0%
! AAAAGTGGAATACATGAAAT+AGG + chr3_3:71790233-71790252 None:intergenic 25.0%
! TGATCATTAACTTAGTATAG+CGG - chr3_3:71790265-71790284 Msa0469800:CDS 25.0%
! ACTCAAGTTATTTAACAGTT+TGG + chr3_3:71790763-71790782 None:intergenic 25.0%
AAAACACAACATTAGATGGA+TGG - chr3_3:71780779-71780798 Msa0469800:three_prime_UTR 30.0%
GATGAAGAAAGGTTTATGAA+TGG + chr3_3:71780925-71780944 None:intergenic 30.0%
! TTTGTGTCATTCATTGAATG+AGG - chr3_3:71781613-71781632 Msa0469800:intron 30.0%
! CACACAACAATTTTCTGTTT+GGG + chr3_3:71781658-71781677 None:intergenic 30.0%
! ACAGATACGTTTAGAGTATT+CGG + chr3_3:71781718-71781737 None:intergenic 30.0%
TACTCTAAACGTATCTGTAT+TGG - chr3_3:71781720-71781739 Msa0469800:intron 30.0%
GATACATATCAGATACTTCA+AGG - chr3_3:71781828-71781847 Msa0469800:CDS 30.0%
CATATCTAGCATACATATCT+TGG - chr3_3:71781864-71781883 Msa0469800:CDS 30.0%
GGATATATGTGAGAAATTAG+TGG - chr3_3:71781885-71781904 Msa0469800:CDS 30.0%
!!! TATGATATGTTTTGATCGCA+AGG - chr3_3:71782049-71782068 Msa0469800:CDS 30.0%
ATATACATATCCTACTGGTA+TGG - chr3_3:71782275-71782294 Msa0469800:intron 30.0%
TCATATTATGCCATCTAATG+AGG + chr3_3:71782384-71782403 None:intergenic 30.0%
GATGGCATAATATGAATGAT+CGG - chr3_3:71782389-71782408 Msa0469800:intron 30.0%
ATGGAAAAGAAATAAAGCCT+CGG + chr3_3:71782500-71782519 None:intergenic 30.0%
! AATAGAATTGACTTTCTTGC+CGG + chr3_3:71782662-71782681 None:intergenic 30.0%
CAAGTGATTTCAATTCTTTG+CGG + chr3_3:71782975-71782994 None:intergenic 30.0%
! TTTCCTTTTCTGATGTTGAA+AGG - chr3_3:71783094-71783113 Msa0469800:intron 30.0%
! TTTTCTTTCTATCCTTTCAC+AGG - chr3_3:71783252-71783271 Msa0469800:intron 30.0%
! AATCTCTTTTCTTTTGCACA+GGG - chr3_3:71783376-71783395 Msa0469800:intron 30.0%
TGAAAATTGTTCCTGAACTT+GGG - chr3_3:71783446-71783465 Msa0469800:intron 30.0%
ATATCTAGCATACTTACCAA+TGG - chr3_3:71783480-71783499 Msa0469800:intron 30.0%
AATTCAAGAATATGAGCCAT+TGG + chr3_3:71783499-71783518 None:intergenic 30.0%
TTTGTCAAAACATGCAAGAT+AGG + chr3_3:71783598-71783617 None:intergenic 30.0%
CATCAAACAAGGTAAAAAAG+GGG - chr3_3:71783697-71783716 Msa0469800:intron 30.0%
! CGTATTCGTTTTATACTATG+TGG - chr3_3:71784055-71784074 Msa0469800:intron 30.0%
! ATTCGTTTTATACTATGTGG+TGG - chr3_3:71784058-71784077 Msa0469800:intron 30.0%
AGATTCATCAACATTTGTCT+TGG - chr3_3:71784106-71784125 Msa0469800:intron 30.0%
GATTCATCAACATTTGTCTT+GGG - chr3_3:71784107-71784126 Msa0469800:intron 30.0%
GAAAAGAAAACAGATTCTTC+AGG + chr3_3:71784321-71784340 None:intergenic 30.0%
AAAAATCAGTAGTCTTTGCT+TGG + chr3_3:71784390-71784409 None:intergenic 30.0%
! AAATTAACCATGAGTTGAGA+AGG - chr3_3:71784435-71784454 Msa0469800:intron 30.0%
!!! AGTTTTTTCGGTTTCTTCAT+AGG - chr3_3:71784818-71784837 Msa0469800:intron 30.0%
TGCTGTAACAGATATGTTAT+GGG + chr3_3:71784928-71784947 None:intergenic 30.0%
TTGCTGTAACAGATATGTTA+TGG + chr3_3:71784929-71784948 None:intergenic 30.0%
! TATTTTGTGAAATCACAGTG+CGG + chr3_3:71784990-71785009 None:intergenic 30.0%
AGGAAAAAATATCCTCAAAG+TGG - chr3_3:71785023-71785042 Msa0469800:intron 30.0%
!!! AAGATTGTTTTTACCGGTAT+TGG + chr3_3:71785161-71785180 None:intergenic 30.0%
ACCGGTAAAAACAATCTTAA+AGG - chr3_3:71785163-71785182 Msa0469800:intron 30.0%
!!! TCGTGGTTTTTTAAGTTTGA+CGG + chr3_3:71785205-71785224 None:intergenic 30.0%
TGATGTTTCTTTGTGAACAT+AGG + chr3_3:71785239-71785258 None:intergenic 30.0%
! TTAACATATGTGGAAGGTTT+TGG + chr3_3:71785814-71785833 None:intergenic 30.0%
AAAACCTTCCACATATGTTA+AGG - chr3_3:71785813-71785832 Msa0469800:CDS 30.0%
CAGCAAAAGTAAAAGGAAAA+AGG + chr3_3:71785919-71785938 None:intergenic 30.0%
CGATAAACAGCAAAAGTAAA+AGG + chr3_3:71785926-71785945 None:intergenic 30.0%
CATATTATCACTGCACTTAT+AGG - chr3_3:71785994-71786013 Msa0469800:intron 30.0%
!! TGCAGTGCTTTCTTTTATTT+AGG - chr3_3:71786083-71786102 Msa0469800:intron 30.0%
! TTGTCAGTTATAACAGCTTT+TGG - chr3_3:71786210-71786229 Msa0469800:intron 30.0%
! TGTCAGTTATAACAGCTTTT+GGG - chr3_3:71786211-71786230 Msa0469800:intron 30.0%
TGTATCCCATATATAAGTTG+AGG + chr3_3:71786290-71786309 None:intergenic 30.0%
ACTTATATATGGGATACACA+AGG - chr3_3:71786292-71786311 Msa0469800:intron 30.0%
CTTATATATGGGATACACAA+GGG - chr3_3:71786293-71786312 Msa0469800:intron 30.0%
! ATATTGTTGTCTCTTTTTGG+AGG + chr3_3:71786414-71786433 None:intergenic 30.0%
TATTTCATTCTCCATGAGAA+GGG - chr3_3:71786496-71786515 Msa0469800:intron 30.0%
!!! AATTTTAAGGCCAAGAAGTT+GGG + chr3_3:71786621-71786640 None:intergenic 30.0%
! CAAAGTCCTGATGAATTTTA+AGG + chr3_3:71786634-71786653 None:intergenic 30.0%
!! TGTATTATTTCTGAAATGGG+AGG - chr3_3:71786812-71786831 Msa0469800:intron 30.0%
GGATGTATTTGCTTAAAAGA+AGG - chr3_3:71786846-71786865 Msa0469800:intron 30.0%
GTTTAGAGATGATAATATGG+TGG - chr3_3:71786868-71786887 Msa0469800:intron 30.0%
!! TTATTTTACCTATCTGCCTT+TGG - chr3_3:71786892-71786911 Msa0469800:intron 30.0%
GGAAAAAGATTTCTTATGCA+AGG - chr3_3:71786913-71786932 Msa0469800:intron 30.0%
AGATTTCTTATGCAAGGATT+TGG - chr3_3:71786919-71786938 Msa0469800:intron 30.0%
! ACCTAATAGCTTAAGCTTTT+AGG - chr3_3:71787229-71787248 Msa0469800:intron 30.0%
TCCTAAAAGCTTAAGCTATT+AGG + chr3_3:71787233-71787252 None:intergenic 30.0%
ATATTAACACAATGTTAGGC+AGG - chr3_3:71787344-71787363 Msa0469800:intron 30.0%
TTATATCTAACAACTGGGTA+GGG + chr3_3:71787382-71787401 None:intergenic 30.0%
TTTATATCTAACAACTGGGT+AGG + chr3_3:71787383-71787402 None:intergenic 30.0%
AAACCATTCATGAATCTTAC+CGG - chr3_3:71787401-71787420 Msa0469800:intron 30.0%
TGGGTTATCTTATTCCAATT+TGG - chr3_3:71787573-71787592 Msa0469800:CDS 30.0%
GGGTTATCTTATTCCAATTT+GGG - chr3_3:71787574-71787593 Msa0469800:CDS 30.0%
ATCCTTACTGTTCACTTTAA+AGG + chr3_3:71787649-71787668 None:intergenic 30.0%
! AACAGTAAGGATCTTTGAAA+CGG - chr3_3:71787657-71787676 Msa0469800:CDS 30.0%
!! ATTTTAACACAATGTTAGGC+AGG - chr3_3:71787687-71787706 Msa0469800:intron 30.0%
TTATATCTAACAACTGGGTT+GGG + chr3_3:71787725-71787744 None:intergenic 30.0%
TTTATATCTAACAACTGGGT+TGG + chr3_3:71787383-71787402 None:intergenic 30.0%
ATCACATTAAGGTTCATGAA+TGG + chr3_3:71787750-71787769 None:intergenic 30.0%
TTCATGAACCTTAATGTGAT+AGG - chr3_3:71787750-71787769 Msa0469800:intron 30.0%
TGGGTTATCTTATTCCAATT+TGG - chr3_3:71787573-71787592 Msa0469800:CDS 30.0%
GGGTTATCTTATTCCAATTT+GGG - chr3_3:71787574-71787593 Msa0469800:CDS 30.0%
AAACTATTTGTGACCCAAAT+TGG + chr3_3:71787935-71787954 None:intergenic 30.0%
TTGGGTCACAAATAGTTTAT+TGG - chr3_3:71787937-71787956 Msa0469800:CDS 30.0%
TGGGTCACAAATAGTTTATT+GGG - chr3_3:71787938-71787957 Msa0469800:CDS 30.0%
! TCAAGAGGGTTTTACATATA+GGG - chr3_3:71788236-71788255 Msa0469800:intron 30.0%
AACTCAATATCATACTACCT+CGG + chr3_3:71788263-71788282 None:intergenic 30.0%
!!! GAAATATTGGAATTTTTGGC+AGG + chr3_3:71788605-71788624 None:intergenic 30.0%
! TTTGCTTCTTTTTGTCCTAT+TGG - chr3_3:71788625-71788644 Msa0469800:CDS 30.0%
CTCTAGATGAGTATAGTATT+TGG - chr3_3:71788684-71788703 Msa0469800:intron 30.0%
CATCACAAATCAAAAGAGTT+AGG - chr3_3:71788870-71788889 Msa0469800:intron 30.0%
GAAATAAATATACACAGCCA+AGG - chr3_3:71788892-71788911 Msa0469800:intron 30.0%
GAGTATTTATATGTGAAGCA+TGG + chr3_3:71789005-71789024 None:intergenic 30.0%
! GTTTGAGATACACTCTAAAA+AGG + chr3_3:71789209-71789228 None:intergenic 30.0%
AAGCGTGCTACATTTATTAA+GGG - chr3_3:71789241-71789260 Msa0469800:intron 30.0%
TTTAAGTGTTTACACTACCA+AGG - chr3_3:71789300-71789319 Msa0469800:intron 30.0%
TTAAGTGTTTACACTACCAA+GGG - chr3_3:71789301-71789320 Msa0469800:intron 30.0%
! TTTTCCTATCAATGATCTCA+AGG + chr3_3:71789502-71789521 None:intergenic 30.0%
TGAGATCATTGATAGGAAAA+AGG - chr3_3:71789502-71789521 Msa0469800:intron 30.0%
AACATAATGTTGTCCACAAA+GGG + chr3_3:71789665-71789684 None:intergenic 30.0%
! TTCTTTTCAAAGTTACTGTG+TGG - chr3_3:71789694-71789713 Msa0469800:intron 30.0%
TGTTTGACTGTTAGAAAATG+GGG - chr3_3:71790028-71790047 Msa0469800:intron 30.0%
CATTAAAATATGTGGGATGA+TGG - chr3_3:71790093-71790112 Msa0469800:intron 30.0%
CAAAAGAACAAAAATTCGAG+TGG + chr3_3:71790148-71790167 None:intergenic 30.0%
ATACAAATTCATAACGTACC+TGG - chr3_3:71790288-71790307 Msa0469800:CDS 30.0%
!! AGCTTGTTAGTATGATAACT+TGG - chr3_3:71790336-71790355 Msa0469800:CDS 30.0%
!! GAAAGCAATTTAAGTTTTGC+AGG + chr3_3:71790513-71790532 None:intergenic 30.0%
CAAATAGACAAAACCAAACT+CGG - chr3_3:71790635-71790654 Msa0469800:five_prime_UTR 30.0%
!!! ACTTCTTTTAGTTTTTCCTC+TGG - chr3_3:71790687-71790706 Msa0469800:five_prime_UTR 30.0%
!!! CTTCTTTTAGTTTTTCCTCT+GGG - chr3_3:71790688-71790707 Msa0469800:five_prime_UTR 30.0%
! TTTGGTAATCTACTCAACTA+GGG + chr3_3:71790745-71790764 None:intergenic 30.0%
GACCGAAAAATTGATAAACA+TGG + chr3_3:71790815-71790834 None:intergenic 30.0%
ATGTGGGATGGTTCTTAAAT+TGG + chr3_3:71780756-71780775 None:intergenic 35.0%
! TTGTGTTTTCAAATGTGGGA+TGG + chr3_3:71780768-71780787 None:intergenic 35.0%
AAAGCAATGTAGAAAGAGTG+GGG + chr3_3:71780888-71780907 None:intergenic 35.0%
GAAAGCAATGTAGAAAGAGT+GGG + chr3_3:71780889-71780908 None:intergenic 35.0%
TGAAAGCAATGTAGAAAGAG+TGG + chr3_3:71780890-71780909 None:intergenic 35.0%
TGAATTGATCTCACGTGAAA+TGG - chr3_3:71781235-71781254 Msa0469800:intron 35.0%
GAAATGGAAACTTCTTCTGA+TGG - chr3_3:71781251-71781270 Msa0469800:intron 35.0%
!! TTCATCTTGGAGAGTATCAA+TGG - chr3_3:71781291-71781310 Msa0469800:intron 35.0%
!! TCATCTTGGAGAGTATCAAT+GGG - chr3_3:71781292-71781311 Msa0469800:intron 35.0%
!! AGTATCAATGGGTTACGTAT+GGG - chr3_3:71781303-71781322 Msa0469800:intron 35.0%
AGAATGGTTTATTGCATTGC+AGG - chr3_3:71781421-71781440 Msa0469800:intron 35.0%
TGTTACCATTTATGCTTCGT+TGG - chr3_3:71781580-71781599 Msa0469800:intron 35.0%
GTTACCATTTATGCTTCGTT+GGG - chr3_3:71781581-71781600 Msa0469800:intron 35.0%
! AATTTTCTGTTTGGGAAGAG+TGG + chr3_3:71781650-71781669 None:intergenic 35.0%
! GCACACAACAATTTTCTGTT+TGG + chr3_3:71781659-71781678 None:intergenic 35.0%
ACTCATACTTTGCAGATACT+TGG - chr3_3:71781745-71781764 Msa0469800:intron 35.0%
CTCATACTTTGCAGATACTT+GGG - chr3_3:71781746-71781765 Msa0469800:intron 35.0%
TCATACTTTGCAGATACTTG+GGG - chr3_3:71781747-71781766 Msa0469800:intron 35.0%
GAAATTAGTGGAGATGTAAG+CGG - chr3_3:71781897-71781916 Msa0469800:CDS 35.0%
AAATTAGTGGAGATGTAAGC+GGG - chr3_3:71781898-71781917 Msa0469800:CDS 35.0%
TTTATGGACACCTCATTAGA+TGG - chr3_3:71782371-71782390 Msa0469800:intron 35.0%
!! ACTGAGTTTGCAAGTTTTGT+TGG - chr3_3:71782439-71782458 Msa0469800:intron 35.0%
!!! CTGAGTTTGCAAGTTTTGTT+GGG - chr3_3:71782440-71782459 Msa0469800:intron 35.0%
ACTGCTCAACATGTAATTTC+TGG - chr3_3:71782606-71782625 Msa0469800:intron 35.0%
CAATGCTGCTAGAAATTTAC+AGG + chr3_3:71782763-71782782 None:intergenic 35.0%
AAGCCTTTCAACATCAGAAA+AGG + chr3_3:71783100-71783119 None:intergenic 35.0%
! TTTTCTGATGTTGAAAGGCT+TGG - chr3_3:71783099-71783118 Msa0469800:intron 35.0%
GCAGTTATAATGTACACAAG+TGG - chr3_3:71783168-71783187 Msa0469800:intron 35.0%
TCAAAGATGCTTCTAACCTT+AGG + chr3_3:71783207-71783226 None:intergenic 35.0%
TAGACTCTAGGCTACTATTT+AGG + chr3_3:71783287-71783306 None:intergenic 35.0%
! GAATCTCTTTTCTTTTGCAC+AGG - chr3_3:71783375-71783394 Msa0469800:intron 35.0%
GTGAAAATTGTTCCTGAACT+TGG - chr3_3:71783445-71783464 Msa0469800:intron 35.0%
CAGTAACACTTCAGCATATA+GGG - chr3_3:71783540-71783559 Msa0469800:intron 35.0%
! TAGAATTTGTTTGCTGCTGT+TGG - chr3_3:71783633-71783652 Msa0469800:intron 35.0%
!! GATGTATCGGTTAGAGTTAA+TGG + chr3_3:71783681-71783700 None:intergenic 35.0%
TCTAACCGATACATCAAACA+AGG - chr3_3:71783686-71783705 Msa0469800:intron 35.0%
AAGGTAAAAAAGGGGACAAA+AGG - chr3_3:71783705-71783724 Msa0469800:intron 35.0%
AGGTAAAAAAGGGGACAAAA+GGG - chr3_3:71783706-71783725 Msa0469800:intron 35.0%
GTCATACAGGTAAATGCAAA+GGG - chr3_3:71783890-71783909 Msa0469800:intron 35.0%
AAAAAGGTCCAAGCAATTCT+GGG - chr3_3:71784028-71784047 Msa0469800:intron 35.0%
AAATACCATTAGGGAAGAGT+AGG - chr3_3:71784261-71784280 Msa0469800:intron 35.0%
GAAGAGTAGGAGTAAAACAA+TGG - chr3_3:71784274-71784293 Msa0469800:intron 35.0%
CTTCCAGTAGTATATAAGGT+CGG - chr3_3:71784340-71784359 Msa0469800:intron 35.0%
TTCCAGTAGTATATAAGGTC+GGG - chr3_3:71784341-71784360 Msa0469800:intron 35.0%
TTAATTTATAGGGAGCTGAG+TGG + chr3_3:71784422-71784441 None:intergenic 35.0%
TCTGTCATAAGTTATGACCA+TGG - chr3_3:71784519-71784538 Msa0469800:CDS 35.0%
!!! TTCTTTTGATGATGAATCGG+TGG - chr3_3:71784589-71784608 Msa0469800:CDS 35.0%
ATAGCTTAAAGGACCAAATC+CGG + chr3_3:71784683-71784702 None:intergenic 35.0%
! GATTTGGTCCTTTAAGCTAT+TGG - chr3_3:71784683-71784702 Msa0469800:intron 35.0%
TGAAAGGACCAATAGCTTAA+AGG + chr3_3:71784694-71784713 None:intergenic 35.0%
GGTTTATGAAGATGATGAAG+AGG + chr3_3:71784745-71784764 None:intergenic 35.0%
AACAGATATGTTATGGGGTT+GGG + chr3_3:71784922-71784941 None:intergenic 35.0%
TAACAGATATGTTATGGGGT+TGG + chr3_3:71784923-71784942 None:intergenic 35.0%
GCTGTAACAGATATGTTATG+GGG + chr3_3:71784927-71784946 None:intergenic 35.0%
AAAGCTCATGGTCTTTCTTA+GGG + chr3_3:71784954-71784973 None:intergenic 35.0%
! AAAAAAGTGTGGAAAGCTCA+TGG + chr3_3:71784966-71784985 None:intergenic 35.0%
ATATCCTCAAAGTGGTTTAG+AGG - chr3_3:71785031-71785050 Msa0469800:intron 35.0%
ATATCCTCTAAACCACTTTG+AGG + chr3_3:71785038-71785057 None:intergenic 35.0%
!!! TGCGCATTTTGAGACTTAAA+AGG - chr3_3:71785134-71785153 Msa0469800:intron 35.0%
AGACTTAAAAGGACCAATAC+CGG - chr3_3:71785145-71785164 Msa0469800:intron 35.0%
ACAATCTTAAAGGACCAATC+TGG - chr3_3:71785173-71785192 Msa0469800:intron 35.0%
!!! TTTGACGGTTTTTTCCAGAT+TGG + chr3_3:71785190-71785209 None:intergenic 35.0%
AAATGAAATTCACTCAGGAC+TGG - chr3_3:71785548-71785567 Msa0469800:intron 35.0%
!! GATTTTGACGATACTTCTGT+TGG - chr3_3:71785775-71785794 Msa0469800:CDS 35.0%
ACTACCTTAACATATGTGGA+AGG + chr3_3:71785820-71785839 None:intergenic 35.0%
ATATTCCATGAACTTACACC+TGG - chr3_3:71786047-71786066 Msa0469800:intron 35.0%
GATGGCTGAGTAAATTCTTT+GGG + chr3_3:71786336-71786355 None:intergenic 35.0%
TGATGGCTGAGTAAATTCTT+TGG + chr3_3:71786337-71786356 None:intergenic 35.0%
TGGAGAATGAAATAGGATTC+AGG + chr3_3:71786490-71786509 None:intergenic 35.0%
CTTCTCATGGAGAATGAAAT+AGG + chr3_3:71786497-71786516 None:intergenic 35.0%
CTATTTCATTCTCCATGAGA+AGG - chr3_3:71786495-71786514 Msa0469800:intron 35.0%
TTGTTGATCCAATTGCTTTG+TGG + chr3_3:71786522-71786541 None:intergenic 35.0%
!!! GAATTTTAAGGCCAAGAAGT+TGG + chr3_3:71786622-71786641 None:intergenic 35.0%
!! TCTTGGCCTTAAAATTCATC+AGG - chr3_3:71786625-71786644 Msa0469800:intron 35.0%
! ATGTGGAATTTTCTGTATGC+AGG - chr3_3:71786657-71786676 Msa0469800:intron 35.0%
! TCTGAAATGGGAGGAATATA+CGG - chr3_3:71786821-71786840 Msa0469800:intron 35.0%
! ATCTTTTTCCAAAGGCAGAT+AGG + chr3_3:71786903-71786922 None:intergenic 35.0%
! TCTTTTCTCAGTTAATCGAC+TGG - chr3_3:71786945-71786964 Msa0469800:intron 35.0%
AAAGACAAGAGAGTCTTACA+AGG - chr3_3:71787066-71787085 Msa0469800:intron 35.0%
! TCTTTTTCTTGTGGAGCAAA+AGG - chr3_3:71787116-71787135 Msa0469800:intron 35.0%
CACAAGAACTAACAAAGCAA+TGG + chr3_3:71787182-71787201 None:intergenic 35.0%
ACTTTCGTTTCAAAGAACAG+AGG + chr3_3:71787321-71787340 None:intergenic 35.0%
AACCATTCATGAATCTTACC+GGG - chr3_3:71787402-71787421 Msa0469800:intron 35.0%
! TCTAAAACATAAACCTGTCC+CGG + chr3_3:71787423-71787442 None:intergenic 35.0%
AAACTATTCGTGTCCCAAAT+TGG + chr3_3:71787590-71787609 None:intergenic 35.0%
TTGGGACACGAATAGTTTAT+TGG - chr3_3:71787592-71787611 Msa0469800:CDS 35.0%
TGGGACACGAATAGTTTATT+GGG - chr3_3:71787593-71787612 Msa0469800:CDS 35.0%
!! GACCTTTAAAGTGAACAGTA+AGG - chr3_3:71787644-71787663 Msa0469800:CDS 35.0%
GGGTCACAAATAGTTTATTG+GGG - chr3_3:71787939-71787958 Msa0469800:CDS 35.0%
! ACTTTTAGTGCGAACATTTG+AGG - chr3_3:71787990-71788009 Msa0469800:intron 35.0%
TATTGTGAACAATTGCGCTT+TGG + chr3_3:71788067-71788086 None:intergenic 35.0%
GACAGGAAAAATTGTCAAGA+GGG - chr3_3:71788222-71788241 Msa0469800:intron 35.0%
! GTCAAGAGGGTTTTACATAT+AGG - chr3_3:71788235-71788254 Msa0469800:intron 35.0%
AAACCTAGGATACTCATCTA+GGG + chr3_3:71788332-71788351 None:intergenic 35.0%
TAAACCTAGGATACTCATCT+AGG + chr3_3:71788333-71788352 None:intergenic 35.0%
GATGAGTATCCTAGGTTTAT+CGG - chr3_3:71788334-71788353 Msa0469800:intron 35.0%
AACAAAACACCGATAAACCT+AGG + chr3_3:71788346-71788365 None:intergenic 35.0%
TTGTTAAATGAAATGCACCC+TGG + chr3_3:71788409-71788428 None:intergenic 35.0%
!!! GATGTTCCATCCACTTTTTT+TGG - chr3_3:71788535-71788554 Msa0469800:CDS 35.0%
TTCATATGTTGCATGGATGT+AGG - chr3_3:71788715-71788734 Msa0469800:intron 35.0%
TATACACAGCCAAGGAAATT+AGG - chr3_3:71788900-71788919 Msa0469800:intron 35.0%
TCTTTCTGTCCTAATTTCCT+TGG + chr3_3:71788912-71788931 None:intergenic 35.0%
AAGGAAATTAGGACAGAAAG+AGG - chr3_3:71788911-71788930 Msa0469800:intron 35.0%
!!! TGGTACTGGTATGACAATTT+TGG - chr3_3:71788974-71788993 Msa0469800:intron 35.0%
! TCCTTATGCAACTAGACTTT+TGG - chr3_3:71789032-71789051 Msa0469800:intron 35.0%
TCCAAAAGTCTAGTTGCATA+AGG + chr3_3:71789036-71789055 None:intergenic 35.0%
GAAGCGTGCTACATTTATTA+AGG - chr3_3:71789240-71789259 Msa0469800:intron 35.0%
TAAGTGTTTACACTACCAAG+GGG - chr3_3:71789302-71789321 Msa0469800:intron 35.0%
!! TTGCTGTAAAGGTTGATGAA+CGG - chr3_3:71789423-71789442 Msa0469800:intron 35.0%
!! AGTCTTCAGGTATTGAGAAT+GGG + chr3_3:71789601-71789620 None:intergenic 35.0%
!! TAGTCTTCAGGTATTGAGAA+TGG + chr3_3:71789602-71789621 None:intergenic 35.0%
ACATAATGTTGTCCACAAAG+GGG + chr3_3:71789664-71789683 None:intergenic 35.0%
CAACATAATGTTGTCCACAA+AGG + chr3_3:71789666-71789685 None:intergenic 35.0%
! GAAAGCATATTTCAGCTCAT+TGG - chr3_3:71790115-71790134 Msa0469800:intron 35.0%
AAGAACAAAAATTCGAGTGG+TGG + chr3_3:71790145-71790164 None:intergenic 35.0%
TCATTTGAGAACGTGAAAAG+TGG + chr3_3:71790248-71790267 None:intergenic 35.0%
ATATTTGCAGGAAGCAAAGA+AGG - chr3_3:71790464-71790483 Msa0469800:CDS 35.0%
TTAAATTGCTTTCTGACCCA+TGG - chr3_3:71790520-71790539 Msa0469800:CDS 35.0%
!!! CGAGTTTGGTTTTGTCTATT+TGG + chr3_3:71790637-71790656 None:intergenic 35.0%
!!! TTTTAGTTTTTCCTCTGGGA+CGG - chr3_3:71790692-71790711 Msa0469800:five_prime_UTR 35.0%
! GTTTGGTAATCTACTCAACT+AGG + chr3_3:71790746-71790765 None:intergenic 35.0%
GGCGGAAATAACAAGAGAAA+AGG + chr3_3:71780867-71780886 None:intergenic 40.0%
! GTAATGGGAGTGATGAAGAA+AGG + chr3_3:71780936-71780955 None:intergenic 40.0%
ATCTCCGTTAACTTCACTCT+GGG - chr3_3:71781136-71781155 Msa0469800:intron 40.0%
AAGTTCGAGAAGCTTCATCT+TGG - chr3_3:71781278-71781297 Msa0469800:intron 40.0%
!! GAGTATCAATGGGTTACGTA+TGG - chr3_3:71781302-71781321 Msa0469800:intron 40.0%
! TCTGTTTGCAGTTTTGCTTC+TGG - chr3_3:71781338-71781357 Msa0469800:intron 40.0%
!! TTGCAGTTTTGCTTCTGGTT+TGG - chr3_3:71781343-71781362 Msa0469800:intron 40.0%
ATGCTGACACTAGAGAAGAA+TGG - chr3_3:71781405-71781424 Msa0469800:intron 40.0%
TTCTCCCAACGAAGCATAAA+TGG + chr3_3:71781588-71781607 None:intergenic 40.0%
TGAGCAAGAAGAGACTGAAT+CGG - chr3_3:71781930-71781949 Msa0469800:CDS 40.0%
TTGCGACTGAACACATAGTA+CGG + chr3_3:71782228-71782247 None:intergenic 40.0%
! CTTCTTTTCACCATACCAGT+AGG + chr3_3:71782288-71782307 None:intergenic 40.0%
ACTGGTATGGTGAAAAGAAG+AGG - chr3_3:71782288-71782307 Msa0469800:intron 40.0%
CTGGTATGGTGAAAAGAAGA+GGG - chr3_3:71782289-71782308 Msa0469800:intron 40.0%
TATTGTTCATAGGTACACCG+AGG - chr3_3:71782480-71782499 Msa0469800:intron 40.0%
TGGTACAGATTTCACAAGTG+AGG + chr3_3:71782925-71782944 None:intergenic 40.0%
GAGGTTACAACTGTGATTTG+TGG - chr3_3:71782949-71782968 Msa0469800:intron 40.0%
AACTGCAACATCAGCTGAAA+GGG + chr3_3:71783154-71783173 None:intergenic 40.0%
TAACTGCAACATCAGCTGAA+AGG + chr3_3:71783155-71783174 None:intergenic 40.0%
! ATGTACACAAGTGGAAGTAC+AGG - chr3_3:71783177-71783196 Msa0469800:intron 40.0%
AGGAAAGTCAATCCTGTGAA+AGG + chr3_3:71783267-71783286 None:intergenic 40.0%
ATAGTAGCCTAGAGTCTAGA+TGG - chr3_3:71783289-71783308 Msa0469800:intron 40.0%
! CCTATATGCTGAAGTGTTAC+TGG + chr3_3:71783542-71783561 None:intergenic 40.0%
CCAGTAACACTTCAGCATAT+AGG - chr3_3:71783539-71783558 Msa0469800:intron 40.0%
CATGCAAGATAGGAAAACAG+AGG + chr3_3:71783588-71783607 None:intergenic 40.0%
! AATTTGTTTGCTGCTGTTGG+AGG - chr3_3:71783636-71783655 Msa0469800:intron 40.0%
GGTAAAAAAGGGGACAAAAG+GGG - chr3_3:71783707-71783726 Msa0469800:intron 40.0%
ATTCTTGATCGTGTTCGTGA+TGG - chr3_3:71783774-71783793 Msa0469800:intron 40.0%
!! TCGTGATGGAGTTTTCAAGA+AGG - chr3_3:71783788-71783807 Msa0469800:intron 40.0%
CACATTGGTGCATAATACAC+AGG + chr3_3:71783845-71783864 None:intergenic 40.0%
ATTCACTCACACTCTCACAT+TGG + chr3_3:71783860-71783879 None:intergenic 40.0%
AATTCGTTCTCTGGTCATAC+AGG - chr3_3:71783877-71783896 Msa0469800:intron 40.0%
GGTCATACAGGTAAATGCAA+AGG - chr3_3:71783889-71783908 Msa0469800:intron 40.0%
ATACAGGTAAATGCAAAGGG+AGG - chr3_3:71783893-71783912 Msa0469800:intron 40.0%
TGCAAAGGGAGGATTATCAA+AGG - chr3_3:71783904-71783923 Msa0469800:intron 40.0%
TTGATTTAGCCTATGCACGA+AGG - chr3_3:71783933-71783952 Msa0469800:intron 40.0%
CAAAAAGGTCCAAGCAATTC+TGG - chr3_3:71784027-71784046 Msa0469800:intron 40.0%
TCTTTGTGAGTCACCAGAAA+GGG + chr3_3:71784089-71784108 None:intergenic 40.0%
ATCTTTGTGAGTCACCAGAA+AGG + chr3_3:71784090-71784109 None:intergenic 40.0%
TTACTCCTACTCTTCCCTAA+TGG + chr3_3:71784269-71784288 None:intergenic 40.0%
GAGTAAAACAATGGTCGTGA+AGG - chr3_3:71784283-71784302 Msa0469800:intron 40.0%
TCCAGTAGTATATAAGGTCG+GGG - chr3_3:71784342-71784361 Msa0469800:intron 40.0%
!! ATTTGGTGCTTAACACTCCA+TGG + chr3_3:71784539-71784558 None:intergenic 40.0%
GAAAAACGGGTCAAACTTGA+AGG + chr3_3:71784661-71784680 None:intergenic 40.0%
!! TCAAGTTTGACCCGTTTTTC+CGG - chr3_3:71784661-71784680 Msa0469800:intron 40.0%
AAGGACCAAATCCGGAAAAA+CGG + chr3_3:71784675-71784694 None:intergenic 40.0%
!!! GTGCATGTTTTGAGACTGAA+AGG + chr3_3:71784710-71784729 None:intergenic 40.0%
! AAGTTCTGACTTGCAGTTAC+TGG - chr3_3:71784862-71784881 Msa0469800:intron 40.0%
AAGCTCATGGTCTTTCTTAG+GGG + chr3_3:71784953-71784972 None:intergenic 40.0%
GAAAGCTCATGGTCTTTCTT+AGG + chr3_3:71784955-71784974 None:intergenic 40.0%
CATAGGCAAAATTACACTCG+TGG + chr3_3:71785222-71785241 None:intergenic 40.0%
TGATTCACTGTCTGATTCCA+AGG - chr3_3:71785290-71785309 Msa0469800:intron 40.0%
ACTCGCAAGTTCATCTATCT+TGG + chr3_3:71785358-71785377 None:intergenic 40.0%
!! ATATGTTCAACTGGCCTTGA+TGG - chr3_3:71785422-71785441 Msa0469800:intron 40.0%
ATAGACCGGCAACAAGTATT+GGG + chr3_3:71785509-71785528 None:intergenic 40.0%
AATAGACCGGCAACAAGTAT+TGG + chr3_3:71785510-71785529 None:intergenic 40.0%
! AATACTTGTTGCCGGTCTAT+TGG - chr3_3:71785509-71785528 Msa0469800:intron 40.0%
! TTTTCAGAAGGCCAATAGAC+CGG + chr3_3:71785523-71785542 None:intergenic 40.0%
GTGAAGTTAGTAAGAAGCAG+TGG + chr3_3:71785600-71785619 None:intergenic 40.0%
AGACCATATGCTTGACCTAT+TGG + chr3_3:71785724-71785743 None:intergenic 40.0%
!! ACATATGTGGAAGGTTTTGG+CGG + chr3_3:71785811-71785830 None:intergenic 40.0%
! CTGCATTTTTGTAGTTGACC+AGG + chr3_3:71786068-71786087 None:intergenic 40.0%
CAGTAATAGATGTCTACTCC+TGG - chr3_3:71786128-71786147 Msa0469800:intron 40.0%
AAATGGGAGGAATATACGGA+AGG - chr3_3:71786825-71786844 Msa0469800:intron 40.0%
GTAGTTGAATATCCACCTTC+AGG + chr3_3:71786971-71786990 None:intergenic 40.0%
CCAATTACTATTTCACCACG+AGG + chr3_3:71787007-71787026 None:intergenic 40.0%
CCTCGTGGTGAAATAGTAAT+TGG - chr3_3:71787004-71787023 Msa0469800:intron 40.0%
CGTGGTGAAATAGTAATTGG+TGG - chr3_3:71787007-71787026 Msa0469800:intron 40.0%
AAATACCCAAGAGTGACACT+TGG + chr3_3:71787034-71787053 None:intergenic 40.0%
!! GCTTAAGCTTTTAGGAGAGT+TGG - chr3_3:71787237-71787256 Msa0469800:intron 40.0%
! GAGGCTTTGATATAATGCCA+AGG + chr3_3:71787264-71787283 None:intergenic 40.0%
AACTCCTGACTACTTGGTTA+TGG + chr3_3:71787286-71787305 None:intergenic 40.0%
TTCGTTTCAAAGAACAGAGG+TGG + chr3_3:71787318-71787337 None:intergenic 40.0%
TGACAGTTCTTGACGTAGAT+TGG - chr3_3:71787455-71787474 Msa0469800:intron 40.0%
GGGACACGAATAGTTTATTG+GGG - chr3_3:71787594-71787613 Msa0469800:CDS 40.0%
TGACAGTTCTTGACGTAGAT+TGG - chr3_3:71787455-71787474 Msa0469800:intron 40.0%
TCAAGAGGGTCTTACAGATA+GGG + chr3_3:71788044-71788063 None:intergenic 40.0%
! GAAAAGAGTCTTATAGGGAC+AGG - chr3_3:71788205-71788224 Msa0469800:intron 40.0%
GGACAGGAAAAATTGTCAAG+AGG - chr3_3:71788221-71788240 Msa0469800:intron 40.0%
! GTGGAAATAGCTTGTACACA+AGG + chr3_3:71788439-71788458 None:intergenic 40.0%
ACTGAGCCAAAAAAAGTGGA+TGG + chr3_3:71788544-71788563 None:intergenic 40.0%
TGAGACTGAGCCAAAAAAAG+TGG + chr3_3:71788548-71788567 None:intergenic 40.0%
TTATTACGGTCTTCTTGCAC+AGG - chr3_3:71788659-71788678 Msa0469800:intron 40.0%
ATGTTGCATGGATGTAGGTA+TGG - chr3_3:71788720-71788739 Msa0469800:intron 40.0%
ATGGATGTAGGTATGGTATC+AGG - chr3_3:71788727-71788746 Msa0469800:intron 40.0%
!! TGCTGTAAAGGTTGATGAAC+GGG - chr3_3:71789424-71789443 Msa0469800:intron 40.0%
TGACGTAGGTAGATTTCATG+CGG - chr3_3:71789469-71789488 Msa0469800:intron 40.0%
GTTGCCTTGAGATCATTGAT+AGG - chr3_3:71789495-71789514 Msa0469800:intron 40.0%
GACATAGTTAAACTGCAGCA+TGG - chr3_3:71789524-71789543 Msa0469800:intron 40.0%
GGACAACATTATGTTGCATG+CGG - chr3_3:71789670-71789689 Msa0469800:intron 40.0%
TCATCCTGCATTGGATGAAT+GGG - chr3_3:71789733-71789752 Msa0469800:intron 40.0%
CAGCAAAGAAGAAACAGTGA+AGG - chr3_3:71789799-71789818 Msa0469800:intron 40.0%
CAAAGAAGAAACAGTGAAGG+AGG - chr3_3:71789802-71789821 Msa0469800:intron 40.0%
TTGACTGTTAGAAAATGGGG+AGG - chr3_3:71790031-71790050 Msa0469800:intron 40.0%
GGAATACATGAAATAGGGAG+AGG + chr3_3:71790227-71790246 None:intergenic 40.0%
CAAATTCATAACGTACCTGG+AGG - chr3_3:71790291-71790310 Msa0469800:CDS 40.0%
TCTTAAGAGCTGCAGTAACT+AGG + chr3_3:71790560-71790579 None:intergenic 40.0%
AGACAAAACCAAACTCGGAA+TGG - chr3_3:71790640-71790659 Msa0469800:five_prime_UTR 40.0%
ATGAGTAACCATTCCGAGTT+TGG + chr3_3:71790651-71790670 None:intergenic 40.0%
AAGAAGTAGCTCCTTTCACT+GGG + chr3_3:71790674-71790693 None:intergenic 40.0%
AAAGAAGTAGCTCCTTTCAC+TGG + chr3_3:71790675-71790694 None:intergenic 40.0%
AAAATACATAACCGTCCCAG+AGG + chr3_3:71790706-71790725 None:intergenic 40.0%
ACAATGAACGCCTACATTGC+CGG - chr3_3:71780996-71781015 Msa0469800:CDS 45.0%
AAGTTAACGGAGATGTGACG+CGG + chr3_3:71781130-71781149 None:intergenic 45.0%
CATCTCCGTTAACTTCACTC+TGG - chr3_3:71781135-71781154 Msa0469800:intron 45.0%
CCTTCCCAGAGTGAAGTTAA+CGG + chr3_3:71781143-71781162 None:intergenic 45.0%
!! TCAATGGGTTACGTATGGGA+AGG - chr3_3:71781307-71781326 Msa0469800:intron 45.0%
! TGTTTGTTCAGGCTTGCTTC+AGG - chr3_3:71781543-71781562 Msa0469800:intron 45.0%
TGCGACTGAACACATAGTAC+GGG + chr3_3:71782227-71782246 None:intergenic 45.0%
TGATCGGCACAAATCTCTTG+AGG - chr3_3:71782405-71782424 Msa0469800:intron 45.0%
GATCGGCACAAATCTCTTGA+GGG - chr3_3:71782406-71782425 Msa0469800:intron 45.0%
! GATGATGACAACAAGAGCAC+AGG + chr3_3:71782871-71782890 None:intergenic 45.0%
GTGAAATCTGTACCAGACAG+AGG - chr3_3:71782930-71782949 Msa0469800:intron 45.0%
TCACAGTTGTAACCTCTGTC+TGG + chr3_3:71782945-71782964 None:intergenic 45.0%
TGGTAGAGAAAACCCTATCG+AGG - chr3_3:71783119-71783138 Msa0469800:intron 45.0%
ACTGCAACATCAGCTGAAAG+GGG + chr3_3:71783153-71783172 None:intergenic 45.0%
CACACTACCATCTAGACTCT+AGG + chr3_3:71783299-71783318 None:intergenic 45.0%
TGTTCCTGAACTTGGGACAA+AGG - chr3_3:71783453-71783472 Msa0469800:intron 45.0%
ACATCCTTTGTCCCAAGTTC+AGG + chr3_3:71783460-71783479 None:intergenic 45.0%
GTTGGAGGCTGTATAGGATA+CGG - chr3_3:71783651-71783670 Msa0469800:intron 45.0%
! TGCATTGATGCCAACTGTGT+TGG - chr3_3:71783737-71783756 Msa0469800:intron 45.0%
CGAACACGATCAAGAATTGC+TGG + chr3_3:71783771-71783790 None:intergenic 45.0%
GTGTGAGTGAATTCGTTCTC+TGG - chr3_3:71783868-71783887 Msa0469800:intron 45.0%
CGAAGGATGCAAGCGATTAA+TGG - chr3_3:71783950-71783969 Msa0469800:intron 45.0%
TGCAAGCGATTAATGGTAGC+TGG - chr3_3:71783957-71783976 Msa0469800:intron 45.0%
GCGATTAATGGTAGCTGGTT+TGG - chr3_3:71783962-71783981 Msa0469800:intron 45.0%
GGGGATTGGAAAAAGCTCTA+TGG - chr3_3:71783990-71784009 Msa0469800:intron 45.0%
CTTTGTGAGTCACCAGAAAG+GGG + chr3_3:71784088-71784107 None:intergenic 45.0%
CCAGTAGTATATAAGGTCGG+GGG - chr3_3:71784343-71784362 Msa0469800:intron 45.0%
TTTCTCATGTCACGCGCATT+TGG + chr3_3:71784556-71784575 None:intergenic 45.0%
GGTCAAACTTGAAGGACATC+AGG + chr3_3:71784653-71784672 None:intergenic 45.0%
!! TTGACCCGTTTTTCCGGATT+TGG - chr3_3:71784667-71784686 Msa0469800:intron 45.0%
AGGACCAAATCCGGAAAAAC+GGG + chr3_3:71784674-71784693 None:intergenic 45.0%
CTTGCAGTTACTGGAAGCAA+AGG - chr3_3:71784871-71784890 Msa0469800:intron 45.0%
! TCAACCCCAATACTTGTTGC+CGG - chr3_3:71785501-71785520 Msa0469800:intron 45.0%
! TAGACCGGCAACAAGTATTG+GGG + chr3_3:71785508-71785527 None:intergenic 45.0%
!! GTCGTTTTCAGTGCTCCAAT+AGG - chr3_3:71785706-71785725 Msa0469800:intron 45.0%
GCTCCAATAGGTCAAGCATA+TGG - chr3_3:71785718-71785737 Msa0469800:intron 45.0%
AGGTCAAGCATATGGTCTCA+CGG - chr3_3:71785726-71785745 Msa0469800:intron 45.0%
GTTGACCAGGTGTAAGTTCA+TGG + chr3_3:71786055-71786074 None:intergenic 45.0%
TCATGTCATGCCCAACTTCT+TGG - chr3_3:71786608-71786627 Msa0469800:intron 45.0%
TCATCAGGACTTTGTGCATG+TGG - chr3_3:71786640-71786659 Msa0469800:intron 45.0%
ACTATTTCACCACGAGGCAT+CGG + chr3_3:71787001-71787020 None:intergenic 45.0%
!! CTTTTAGGAGAGTTGGTCCT+TGG - chr3_3:71787244-71787263 Msa0469800:intron 45.0%
TCCTGACTACTTGGTTATGG+AGG + chr3_3:71787283-71787302 None:intergenic 45.0%
GGAGAAAACTCCTGACTACT+TGG + chr3_3:71787292-71787311 None:intergenic 45.0%
TTCAAAGAACAGAGGTGGTG+AGG + chr3_3:71787313-71787332 None:intergenic 45.0%
GTCCCGGTAAGATTCATGAA+TGG + chr3_3:71787407-71787426 None:intergenic 45.0%
TTCATGAATCTTACCGGGAC+AGG - chr3_3:71787407-71787426 Msa0469800:intron 45.0%
GTCAAGAGGGTCTTACAGAT+AGG + chr3_3:71788045-71788064 None:intergenic 45.0%
CAATTGCGCTTTGGTCAAGA+GGG + chr3_3:71788058-71788077 None:intergenic 45.0%
ACAATTGCGCTTTGGTCAAG+AGG + chr3_3:71788059-71788078 None:intergenic 45.0%
! GGTTTTACATATAGGGACCG+AGG - chr3_3:71788243-71788262 Msa0469800:intron 45.0%
TCACCCTAGATGAGTATCCT+AGG - chr3_3:71788326-71788345 Msa0469800:intron 45.0%
ATGCAGTGAACAGAGCATAG+TGG + chr3_3:71788571-71788590 None:intergenic 45.0%
GTAGGTATGGTATCAGGAAC+TGG - chr3_3:71788733-71788752 Msa0469800:intron 45.0%
ATTGTCATACCAGTACCACC+CGG + chr3_3:71788972-71788991 None:intergenic 45.0%
TTACACTACCAAGGGGAGTT+TGG - chr3_3:71789309-71789328 Msa0469800:intron 45.0%
!! GCTGTAAAGGTTGATGAACG+GGG - chr3_3:71789425-71789444 Msa0469800:intron 45.0%
GTAGGTAGATTTCATGCGGA+TGG - chr3_3:71789473-71789492 Msa0469800:intron 45.0%
CATGGAGAATATGTGTCCCT+GGG - chr3_3:71789542-71789561 Msa0469800:intron 45.0%
AGAATATGTGTCCCTGGGAA+AGG - chr3_3:71789547-71789566 Msa0469800:intron 45.0%
AAGTTACTGTGTGGCACTTG+TGG - chr3_3:71789703-71789722 Msa0469800:intron 45.0%
CTCATCCTGCATTGGATGAA+TGG - chr3_3:71789732-71789751 Msa0469800:intron 45.0%
! GATGAATGGGCTTCAAAGCA+AGG - chr3_3:71789746-71789765 Msa0469800:intron 45.0%
GGTGCATGCATCACTTGTAA+AGG - chr3_3:71789823-71789842 Msa0469800:intron 45.0%
ATTCATAACGTACCTGGAGG+TGG - chr3_3:71790294-71790313 Msa0469800:CDS 45.0%
TGGTTACTCATCCCAGTGAA+AGG - chr3_3:71790660-71790679 Msa0469800:five_prime_UTR 45.0%
GGTAATCTACTCAACTAGGG+TGG + chr3_3:71790742-71790761 None:intergenic 45.0%
!! TATACATAAAATATATAATT+AGG + chr3_3:71781792-71781811 None:intergenic 5.0%
!! ATTTAAAAAGATAATATATT+AGG + chr3_3:71786707-71786726 None:intergenic 5.0%
!!! TAATATATTATCTTTTTAAA+TGG - chr3_3:71786706-71786725 Msa0469800:intron 5.0%
GCAATGTAGAAAGAGTGGGG+CGG + chr3_3:71780885-71780904 None:intergenic 50.0%
GTTTGCGGTTGTTGGAGTTG+CGG + chr3_3:71781052-71781071 None:intergenic 50.0%
! CCGTTAACTTCACTCTGGGA+AGG - chr3_3:71781140-71781159 Msa0469800:intron 50.0%
!! GCTTCTGGTTTGGCGAAGAT+TGG - chr3_3:71781353-71781372 Msa0469800:intron 50.0%
CACATAGTACGGGTGCGATA+CGG + chr3_3:71782217-71782236 None:intergenic 50.0%
GGGGTAAATCAGCCTCGATA+GGG + chr3_3:71783134-71783153 None:intergenic 50.0%
AGGGGTAAATCAGCCTCGAT+AGG + chr3_3:71783135-71783154 None:intergenic 50.0%
! TGGAAGTACAGGCTTGCCTA+AGG - chr3_3:71783188-71783207 Msa0469800:intron 50.0%
! CAGGGTGTGATGATGACACA+TGG - chr3_3:71783394-71783413 Msa0469800:intron 50.0%
CACAGTTGGCATCAATGCAG+TGG + chr3_3:71783736-71783755 None:intergenic 50.0%
GGTACAGCTACCAACACAGT+TGG + chr3_3:71783750-71783769 None:intergenic 50.0%
!! ATGGTAGCTGGTTTGGTGCT+TGG - chr3_3:71783969-71783988 Msa0469800:intron 50.0%
!! TGGTAGCTGGTTTGGTGCTT+GGG - chr3_3:71783970-71783989 Msa0469800:intron 50.0%
AAGGTCCAAGCAATTCTGGG+TGG - chr3_3:71784031-71784050 Msa0469800:intron 50.0%
TACGACCACCCAGAATTGCT+TGG + chr3_3:71784039-71784058 None:intergenic 50.0%
CCCCCGACCTTATATACTAC+TGG + chr3_3:71784346-71784365 None:intergenic 50.0%
GCAGTAGCCTTCTCAACTCA+TGG + chr3_3:71784445-71784464 None:intergenic 50.0%
GTCTCAAAACATGCACGTCG+TGG - chr3_3:71784714-71784733 Msa0469800:intron 50.0%
CACAGTGCGGCAAAAAAGTG+TGG + chr3_3:71784977-71784996 None:intergenic 50.0%
!! TCAGGACTGGTCTCTGCTAA+AGG - chr3_3:71785561-71785580 Msa0469800:intron 50.0%
GATACTTCTGTTGGCCGTGT+AGG - chr3_3:71785784-71785803 Msa0469800:CDS 50.0%
!! AAGGTTTTGGCGGTCCTACA+CGG + chr3_3:71785801-71785820 None:intergenic 50.0%
TTGCTTTGTGGCCCTTCTCA+TGG + chr3_3:71786510-71786529 None:intergenic 50.0%
GAGAAGGGCCACAAAGCAAT+TGG - chr3_3:71786511-71786530 Msa0469800:intron 50.0%
!! CAGTTAATCGACTGGCCTGA+AGG - chr3_3:71786953-71786972 Msa0469800:intron 50.0%
!! TTAATCGACTGGCCTGAAGG+TGG - chr3_3:71786956-71786975 Msa0469800:intron 50.0%
! GTGGTCCAAGTGTCACTCTT+GGG - chr3_3:71787026-71787045 Msa0469800:intron 50.0%
GCCTCCATAACCAAGTAGTC+AGG - chr3_3:71787279-71787298 Msa0469800:intron 50.0%
GAGGGTCTTACAGATAGGGA+AGG + chr3_3:71788040-71788059 None:intergenic 50.0%
!! AGGTTGATGAACGGGGAATG+AGG - chr3_3:71789432-71789451 Msa0469800:intron 50.0%
TTGATGAACGGGGAATGAGG+TGG - chr3_3:71789435-71789454 Msa0469800:intron 50.0%
! GGAATGAGGTGGTTCTACAC+TGG - chr3_3:71789446-71789465 Msa0469800:intron 50.0%
! TGGTTCTACACTGGTGACGT+AGG - chr3_3:71789455-71789474 Msa0469800:intron 50.0%
GCATGGAGAATATGTGTCCC+TGG - chr3_3:71789541-71789560 Msa0469800:intron 50.0%
GTGCATGCATACCTTTCCCA+GGG + chr3_3:71789561-71789580 None:intergenic 50.0%
! GGAAAGGTATGCATGCACGT+TGG - chr3_3:71789563-71789582 Msa0469800:intron 50.0%
! CAGGTTGAGGCAGTTCTTCT+TGG - chr3_3:71789635-71789654 Msa0469800:intron 50.0%
!! GGCTGTTTCTCATCCTGCAT+TGG - chr3_3:71789724-71789743 Msa0469800:intron 50.0%
GAAGCCCATTCATCCAATGC+AGG + chr3_3:71789740-71789759 None:intergenic 50.0%
AACGATGAGGCCGGCAATGT+AGG + chr3_3:71781009-71781028 None:intergenic 55.0%
GGATGACGAGAGGAACGATG+AGG + chr3_3:71781022-71781041 None:intergenic 55.0%
TGTTGGAGTTGCGGAAGAGG+AGG + chr3_3:71781043-71781062 None:intergenic 55.0%
GGTTGTTGGAGTTGCGGAAG+AGG + chr3_3:71781046-71781065 None:intergenic 55.0%
TTAACGGAGATGTGACGCGG+TGG + chr3_3:71781127-71781146 None:intergenic 55.0%
GTGGAGATGTAAGCGGGTGA+TGG - chr3_3:71781904-71781923 Msa0469800:CDS 55.0%
GAGCAGATGCGGCATCAGAT+GGG + chr3_3:71783056-71783075 None:intergenic 55.0%
TGAGCAGATGCGGCATCAGA+TGG + chr3_3:71783057-71783076 None:intergenic 55.0%
CCATCCATGCTGAGCAGATG+CGG + chr3_3:71783067-71783086 None:intergenic 55.0%
GCTGCTGTTGGAGGCTGTAT+AGG - chr3_3:71783645-71783664 Msa0469800:intron 55.0%
CGCTTGCATCCTTCGTGCAT+AGG + chr3_3:71783945-71783964 None:intergenic 55.0%
!! GGTAGCTGGTTTGGTGCTTG+GGG - chr3_3:71783971-71783990 Msa0469800:intron 55.0%
!! CTGGTTTGGTGCTTGGGGAT+TGG - chr3_3:71783976-71783995 Msa0469800:intron 55.0%
! TCACGGAGACTTGTGCTGGT+GGG - chr3_3:71785743-71785762 Msa0469800:intron 55.0%
! GGTGGTCCAAGTGTCACTCT+TGG - chr3_3:71787025-71787044 Msa0469800:intron 55.0%
! AGTGAAGTGTCCACGAGCAC+CGG - chr3_3:71788950-71788969 Msa0469800:intron 55.0%
! TGGCTCTACCAAACTCCCCT+TGG + chr3_3:71789320-71789339 None:intergenic 55.0%
CGTGCATGCATACCTTTCCC+AGG + chr3_3:71789562-71789581 None:intergenic 55.0%
TCTTCTTGGCAGCCCCTTTG+TGG - chr3_3:71789649-71789668 Msa0469800:intron 55.0%
AACGTACCTGGAGGTGGAGT+AGG - chr3_3:71790300-71790319 Msa0469800:CDS 55.0%
ACGTACCTGGAGGTGGAGTA+GGG - chr3_3:71790301-71790320 Msa0469800:CDS 55.0%
TACTTCCCTACTCCACCTCC+AGG + chr3_3:71790309-71790328 None:intergenic 55.0%
GGAAGCAAAGAAGGCTCGTC+TGG - chr3_3:71790473-71790492 Msa0469800:CDS 55.0%
GCAGTAACTAGGCCAGTCTC+AGG + chr3_3:71790549-71790568 None:intergenic 55.0%
GACGAGAGGAACGATGAGGC+CGG + chr3_3:71781018-71781037 None:intergenic 60.0%
CGGAAGAGGAGGATGACGAG+AGG + chr3_3:71781032-71781051 None:intergenic 60.0%
TCCAACAACCGCAAACGCCG+CGG - chr3_3:71781056-71781075 Msa0469800:CDS 60.0%
GAGATGTGACGCGGTGGTTG+CGG + chr3_3:71781121-71781140 None:intergenic 60.0%
GATGCCGCATCTGCTCAGCA+TGG - chr3_3:71783060-71783079 Msa0469800:intron 60.0%
CCGCATCTGCTCAGCATGGA+TGG - chr3_3:71783064-71783083 Msa0469800:intron 60.0%
! TGTGGTGGTGCACCCCTTTC+TGG - chr3_3:71784073-71784092 Msa0469800:intron 60.0%
GGTCTCACGGAGACTTGTGC+TGG - chr3_3:71785739-71785758 Msa0469800:intron 60.0%
CTCACGGAGACTTGTGCTGG+TGG - chr3_3:71785742-71785761 Msa0469800:intron 60.0%
! ACTGACTCACCGATGCCTCG+TGG - chr3_3:71786989-71787008 Msa0469800:intron 60.0%
! GTGAAGTGTCCACGAGCACC+GGG - chr3_3:71788951-71788970 Msa0469800:intron 60.0%
GACCCATGGACTCCTGAGAC+TGG - chr3_3:71790534-71790553 Msa0469800:CDS 60.0%
GGCCAGTCTCAGGAGTCCAT+GGG + chr3_3:71790539-71790558 None:intergenic 60.0%
AGGCCAGTCTCAGGAGTCCA+TGG + chr3_3:71790540-71790559 None:intergenic 60.0%
TGGTTGCGGACCGCGAAACC+AGG + chr3_3:71781107-71781126 None:intergenic 65.0%
! GGAAGGCGTGACGACACTCG+CGG - chr3_3:71781157-71781176 Msa0469800:intron 65.0%
!! AAGTGTCCACGAGCACCGGG+TGG - chr3_3:71788954-71788973 Msa0469800:intron 65.0%
GCCGCGGCGTTTGCGGTTGT+TGG + chr3_3:71781060-71781079 None:intergenic 70.0%
CCGGTAAGCCGCGGCGTTTG+CGG + chr3_3:71781067-71781086 None:intergenic 70.0%
CCGCAAACGCCGCGGCTTAC+CGG - chr3_3:71781064-71781083 Msa0469800:CDS 70.0%
ACCAGGTTCGCCGCCGACGT+CGG + chr3_3:71781090-71781109 None:intergenic 70.0%
CGGCGGCGAACCTGGTTTCG+CGG - chr3_3:71781094-71781113 Msa0469800:CDS 70.0%
CCAGTACCACCCGGTGCTCG+TGG + chr3_3:71788963-71788982 None:intergenic 70.0%
!! CCACGAGCACCGGGTGGTAC+TGG - chr3_3:71788960-71788979 Msa0469800:intron 70.0%
CGACGTCGGCCGGTAAGCCG+CGG + chr3_3:71781076-71781095 None:intergenic 75.0%
CGCGGCTTACCGGCCGACGT+CGG - chr3_3:71781074-71781093 Msa0469800:CDS 75.0%
GGCTTACCGGCCGACGTCGG+CGG - chr3_3:71781077-71781096 Msa0469800:CDS 75.0%
! GGTTCGCCGCCGACGTCGGC+CGG + chr3_3:71781086-71781105 None:intergenic 80.0%
! GCCGACGTCGGCGGCGAACC+TGG - chr3_3:71781086-71781105 Msa0469800:CDS 80.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 71780745 71790849 71780745 ID=Msa0469800;Name=Msa0469800
chr3_3 mRNA 71780745 71790849 71780745 ID=Msa0469800-mRNA-1;Parent=Msa0469800;Name=Msa0469800-mRNA-1;_AED=0.06;_eAED=0.06;_QI=254|1|1|1|1|1|11|208|694
chr3_3 exon 71780745 71781120 71780745 ID=Msa0469800-mRNA-1:exon:17713;Parent=Msa0469800-mRNA-1
chr3_3 exon 71781750 71781956 71781750 ID=Msa0469800-mRNA-1:exon:17712;Parent=Msa0469800-mRNA-1
chr3_3 exon 71782026 71782160 71782026 ID=Msa0469800-mRNA-1:exon:17711;Parent=Msa0469800-mRNA-1
chr3_3 exon 71784507 71784638 71784507 ID=Msa0469800-mRNA-1:exon:17710;Parent=Msa0469800-mRNA-1
chr3_3 exon 71785760 71785877 71785760 ID=Msa0469800-mRNA-1:exon:17709;Parent=Msa0469800-mRNA-1
chr3_3 exon 71787466 71787695 71787466 ID=Msa0469800-mRNA-1:exon:17708;Parent=Msa0469800-mRNA-1
chr3_3 exon 71787785 71787958 71787785 ID=Msa0469800-mRNA-1:exon:17707;Parent=Msa0469800-mRNA-1
chr3_3 exon 71788066 71788197 71788066 ID=Msa0469800-mRNA-1:exon:17706;Parent=Msa0469800-mRNA-1
chr3_3 exon 71788385 71788648 71788385 ID=Msa0469800-mRNA-1:exon:17705;Parent=Msa0469800-mRNA-1
chr3_3 exon 71789960 71790040 71789960 ID=Msa0469800-mRNA-1:exon:17704;Parent=Msa0469800-mRNA-1
chr3_3 exon 71790152 71790849 71790152 ID=Msa0469800-mRNA-1:exon:17703;Parent=Msa0469800-mRNA-1
chr3_3 five_prime_UTR 71790596 71790849 71790596 ID=Msa0469800-mRNA-1:five_prime_utr;Parent=Msa0469800-mRNA-1
chr3_3 CDS 71790152 71790595 71790152 ID=Msa0469800-mRNA-1:cds;Parent=Msa0469800-mRNA-1
chr3_3 CDS 71789960 71790040 71789960 ID=Msa0469800-mRNA-1:cds;Parent=Msa0469800-mRNA-1
chr3_3 CDS 71788385 71788648 71788385 ID=Msa0469800-mRNA-1:cds;Parent=Msa0469800-mRNA-1
chr3_3 CDS 71788066 71788197 71788066 ID=Msa0469800-mRNA-1:cds;Parent=Msa0469800-mRNA-1
chr3_3 CDS 71787785 71787958 71787785 ID=Msa0469800-mRNA-1:cds;Parent=Msa0469800-mRNA-1
chr3_3 CDS 71787466 71787695 71787466 ID=Msa0469800-mRNA-1:cds;Parent=Msa0469800-mRNA-1
chr3_3 CDS 71785760 71785877 71785760 ID=Msa0469800-mRNA-1:cds;Parent=Msa0469800-mRNA-1
chr3_3 CDS 71784507 71784638 71784507 ID=Msa0469800-mRNA-1:cds;Parent=Msa0469800-mRNA-1
chr3_3 CDS 71782026 71782160 71782026 ID=Msa0469800-mRNA-1:cds;Parent=Msa0469800-mRNA-1
chr3_3 CDS 71781750 71781956 71781750 ID=Msa0469800-mRNA-1:cds;Parent=Msa0469800-mRNA-1
chr3_3 CDS 71780953 71781120 71780953 ID=Msa0469800-mRNA-1:cds;Parent=Msa0469800-mRNA-1
chr3_3 three_prime_UTR 71780745 71780952 71780745 ID=Msa0469800-mRNA-1:three_prime_utr;Parent=Msa0469800-mRNA-1
Gene Sequence

>Msa0469800

ATGAACGCCTACATTGCCGGCCTCATCGTTCCTCTCGTCATCCTCCTCTTCCGCAACTCCAACAACCGCAAACGCCGCGGCTTACCGGCCGACGTCGGCGGCGAACCTGGTTTCGCGGTCCGCAACCACCGCGTCACATCTCCGTTAACTTCACTCTGGGAAGGCGTGACGACACTCGCGGAGCTTTTCGAGCTAACATGCAACAAGAATCATGATAGATTGTTACTCGGAACTCGTGAATTGATCTCACGTGAAATGGAAACTTCTTCTGATGGAAGAAAGTTCGAGAAGCTTCATCTTGGAGAGTATCAATGGGTTACGTATGGGAAGGTTTTTGAATCTGTTTGCAGTTTTGCTTCTGGTTTGGCGAAGATTGGTCATGTTAGAGAAGAACGTGTTGCGATTTATGCTGACACTAGAGAAGAATGGTTTATTGCATTGCAGGCTTGCTTCAGGAGAAATGTGACTGTTGTTACCATTTATGCTTCGTTGGGAGAAGAAGCTTTGTGTCATTCATTGAATGAGACAGAGGTTACAACTGTGATTTGTGGCCGCAAAGAATTGAAATCACTTGTAAATATTGCTGGACAACTTGACACTGTGAAACGTGTGATATGTATTGAAGATGATGTCCCATCTGATGCCGCATCTGCTCAGCATGGATGGACAATCATTTCCTTTTCTGATGTTGAAAGGCTTGGTAGAGAAAACCCTATCGAGGCTGATTTACCCCTTTCAGCTGATGTTGCAGTTATAATGTACACAAGTGGAAGTACAGGCTTGCCTAAGGGTGTGATGATGACACATGGCAATATCTTAGCAACAGTGTCTGCTGTAGTGAAAATTGTTCCTGAACTTGGGACAAAGGATGTATATCTAGCATACTTACCAATGGCTCATATTCTTGAATTAATAGCTGAGAATTTGTTTGCTGCTGTTGGAGGCTGTATAGGATACGGAACTCCATTAACTCTAACCGATACATCAAACAAGGTAAAAAAGGGGACAAAAGGGGATGCCACTGCATTGATGCCAACTGTGTTGGTAGCTGTACCAGCAATTCTTGATCGTGTTCGTGATGGAGTTTTCAAGAAGGTAAATGCAAAGGGAGGATTATCAAAGGCATTGTTTGATTTAGCCTATGCACGAAGGATGCAAGCGATTAATGGTAGCTGGTTTGGTGCTTGGGGATTGGAAAAAGCTCTATGGAATTTTCTTGTCTTCAAAAAGGTCCAAGCAATTCTGGGTGGTCGTATTCGTTTTATACTATGTGGTGGTGCACCCCTTTCTGGTGACTCACAAAGATTCATCAACATTTGTCTTGGTGCTCCAATAGGTCAAGCATATGGTCTCACGGAGACTTGTGCTGGTGGGACATTTTCTGATTTTGACGATACTTCTGTTGGCCGTGTAGGACCGCCAAAACCTTCCACATATGTTAAGTTAATCGACTGGCCTGAAGGTGGATATTCAACTACTGACTCACCGATGCCTCGTGGTGAAATAGTAATTGGTGGTCCAAGTGTCACTCTTGGGTATTTCAAAAATGAAGAAAAGACAAGAGAGTCTTACAAGGTTGATGAACGGGGAATGAGGTGGTTCTACACTGGTGACGTAGGTAGATTTCATGCGGATGGTTGCCTTGAGATCATTGATAGGAAAAAGGACATAGTTAAACTGCAGCATGGAGAATATGTGTCCCTGGGAAAGGTTGAGGCAGTTCTTCTTGGCAGCCCCTTTGTGGACAACATTATGTTGCATGCGGATTCTTTTCAAAGTTACTGTGTGGCACTTGTGGCTGTTTCTCATCCTGCATTGGATGAATGGGCTTCAAAGCAAGGAATTGCTTATTCTGATCTTTCAGAACTGTGCAGCAAAGAAGAAACAGTGAAGGAGGTGCATGCATCACTTGTAAAGGAAGCAAAGAAGGCTCGTCTGGAAAAATTTGAAATTCCTGCAAAACTTAAATTGCTTTCTGACCCATGGACTCCTGAGACTGGCCTAGTTACTGCAGCTCTTAAGATCAAGAGAGATGTCATTAGAAAGACTTTTCAAGAAGAGCTCTCAAAGTTATATGCCAAATAG
Protein sequence

>Msa0469800

MNAYIAGLIVPLVILLFRNSNNRKRRGLPADVGGEPGFAVRNHRVTSPLTSLWEGVTTLAELFELTCNKNHDRLLLGTRELISREMETSSDGRKFEKLHLGEYQWVTYGKVFESVCSFASGLAKIGHVREERVAIYADTREEWFIALQACFRRNVTVVTIYASLGEEALCHSLNETEVTTVICGRKELKSLVNIAGQLDTVKRVICIEDDVPSDAASAQHGWTIISFSDVERLGRENPIEADLPLSADVAVIMYTSGSTGLPKGVMMTHGNILATVSAVVKIVPELGTKDVYLAYLPMAHILELIAENLFAAVGGCIGYGTPLTLTDTSNKVKKGTKGDATALMPTVLVAVPAILDRVRDGVFKKVNAKGGLSKALFDLAYARRMQAINGSWFGAWGLEKALWNFLVFKKVQAILGGRIRFILCGGAPLSGDSQRFINICLGAPIGQAYGLTETCAGGTFSDFDDTSVGRVGPPKPSTYVKLIDWPEGGYSTTDSPMPRGEIVIGGPSVTLGYFKNEEKTRESYKVDERGMRWFYTGDVGRFHADGCLEIIDRKKDIVKLQHGEYVSLGKVEAVLLGSPFVDNIMLHADSFQSYCVALVAVSHPALDEWASKQGIAYSDLSELCSKEETVKEVHASLVKEAKKARLEKFEIPAKLKLLSDPWTPETGLVTAALKIKRDVIRKTFQEELSKLYAK*