AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0374240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0374240 MtrunA17_Chr3g0124631 93.983 698 38 1 1 694 1 698 0.0 1335
Msa0374240 MtrunA17_Chr1g0160041 76.259 695 163 2 1 693 1 695 0.0 1112
Msa0374240 MtrunA17_Chr3g0120731 61.295 695 265 2 3 693 33 727 0.0 897
Msa0374240 MtrunA17_Chr1g0205711 35.194 645 374 11 56 694 80 686 2.85e-119 372
Msa0374240 MtrunA17_Chr5g0396691 32.099 648 395 14 55 692 42 654 3.21e-102 327
Msa0374240 MtrunA17_Chr5g0396711 31.944 648 396 14 55 692 42 654 1.76e-99 319
Msa0374240 MtrunA17_Chr1g0194371 31.798 673 401 14 37 692 22 653 1.28e-97 315
Msa0374240 MtrunA17_Chr4g0034181 31.062 631 382 16 78 692 58 651 7.34e-93 302
Msa0374240 MtrunA17_Chr8g0388081 31.509 603 380 11 101 692 13 593 2.97e-91 296
Msa0374240 MtrunA17_Chr7g0270221 31.988 644 346 16 56 685 41 606 1.51e-90 295
Msa0374240 MtrunA17_Chr1g0162621 29.927 685 422 16 27 694 12 655 3.04e-90 295
Msa0374240 MtrunA17_Chr3g0121951 25.234 642 393 20 106 692 105 714 1.24e-37 149
Msa0374240 MtrunA17_Chr3g0121931 24.493 641 402 16 106 692 107 719 1.37e-37 149
Msa0374240 MtrunA17_Chr8g0377991 25.078 642 399 18 106 692 109 723 2.15e-34 140
Msa0374240 MtrunA17_Chr4g0039791 29.825 342 166 14 248 579 204 481 4.58e-25 110
Msa0374240 MtrunA17_Chr5g0409791 27.160 486 258 20 115 579 78 488 1.39e-24 108
Msa0374240 MtrunA17_Chr1g0157401 27.405 343 175 12 248 581 205 482 1.23e-20 96.3
Msa0374240 MtrunA17_Chr5g0409771 24.089 494 279 18 106 584 68 480 1.38e-19 93.2
Msa0374240 MtrunA17_Chr1g0197391 26.087 345 178 14 247 581 211 488 2.28e-16 82.8
Msa0374240 MtrunA17_Chr6g0471921 23.800 479 281 15 106 577 32 433 1.92e-15 79.7
Msa0374240 MtrunA17_Chr5g0433231 29.804 255 133 9 441 682 322 543 1.03e-14 77.8
Msa0374240 MtrunA17_Chr2g0334131 27.530 247 149 10 419 646 45 280 6.31e-13 70.1
Msa0374240 MtrunA17_Chr2g0327341 28.512 242 131 11 419 649 304 514 7.67e-13 71.6
Msa0374240 MtrunA17_Chr5g0433241 49.398 83 36 3 500 582 391 467 8.46e-13 71.6
Msa0374240 MtrunA17_Chr3g0109731 33.500 200 99 8 422 608 306 484 1.02e-12 71.2
Msa0374240 MtrunA17_Chr1g0180541 28.191 188 113 8 407 583 296 472 1.19e-12 70.9
Msa0374240 MtrunA17_Chr4g0028411 29.384 211 116 8 445 649 334 517 1.78e-12 70.5
Msa0374240 MtrunA17_Chr5g0433221 30.601 183 97 6 500 682 391 543 5.02e-12 68.9
Msa0374240 MtrunA17_Chr6g0471311 29.947 187 101 6 500 686 393 549 5.73e-12 68.9
Msa0374240 MtrunA17_Chr1g0180551 30.488 164 101 6 425 583 390 545 1.60e-11 67.4
Msa0374240 MtrunA17_Chr5g0395431 28.163 245 151 11 419 647 349 584 1.90e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0374240 AT1G77590.1 72.767 694 185 2 1 693 1 691 0.0 1085
Msa0374240 AT2G04350.2 64.042 673 239 1 24 693 48 720 0.0 906
Msa0374240 AT2G04350.1 64.042 673 239 1 24 693 48 720 0.0 906
Msa0374240 AT1G77590.2 75.503 547 131 1 147 693 2 545 0.0 885
Msa0374240 AT5G27600.1 36.318 603 350 12 100 694 113 689 2.96e-121 378
Msa0374240 AT3G05970.1 35.257 641 375 10 56 692 83 687 8.10e-117 366
Msa0374240 AT4G23850.1 32.569 654 386 17 54 692 42 655 1.15e-100 323
Msa0374240 AT1G64400.1 32.198 646 389 14 61 694 49 657 1.24e-98 318
Msa0374240 AT2G47240.1 31.183 651 399 12 56 694 41 654 5.38e-94 305
Msa0374240 AT2G47240.2 31.183 651 399 12 56 694 41 654 5.38e-94 305
Msa0374240 AT2G47240.3 31.183 651 399 12 56 694 41 654 5.38e-94 305
Msa0374240 AT4G11030.1 31.279 649 401 14 54 692 42 655 2.19e-93 304
Msa0374240 AT2G47240.4 31.922 614 383 11 93 694 5 595 1.60e-92 300
Msa0374240 AT1G49430.1 31.631 607 382 10 100 694 74 659 5.81e-92 300
Msa0374240 AT1G49430.2 32.080 452 274 10 100 539 74 504 1.16e-59 209
Msa0374240 AT3G23790.1 25.816 643 387 23 107 692 112 721 4.33e-39 154
Msa0374240 AT4G14070.1 24.844 640 390 19 106 693 127 727 8.28e-37 147
Msa0374240 AT4G19010.1 29.532 342 171 14 248 581 205 484 2.52e-25 111
Msa0374240 AT1G20500.1 27.679 336 176 11 248 579 198 470 8.79e-23 103
Msa0374240 AT1G20510.2 28.198 344 174 12 248 583 190 468 3.97e-21 97.8
Msa0374240 AT1G20510.1 28.529 340 170 12 248 579 190 464 5.46e-21 97.8
Msa0374240 AT1G20510.3 27.950 322 160 11 248 561 190 447 4.34e-19 91.3
Msa0374240 AT1G21540.1 28.324 346 165 13 251 581 191 468 7.23e-17 84.7
Msa0374240 AT5G38120.3 26.254 339 175 15 248 579 200 470 9.75e-16 81.3
Msa0374240 AT5G38120.4 26.254 339 175 15 248 579 200 470 1.02e-15 80.9
Msa0374240 AT5G38120.2 26.254 339 175 15 248 579 200 470 1.02e-15 80.9
Msa0374240 AT5G38120.1 26.254 339 175 15 248 579 200 470 1.16e-15 80.9
Msa0374240 AT5G16340.1 32.075 212 114 7 478 689 369 550 2.57e-15 80.1
Msa0374240 AT5G16370.1 30.194 361 158 15 248 588 186 472 3.03e-15 79.7
Msa0374240 AT1G75960.1 31.959 194 104 6 480 673 371 536 3.77e-14 76.3
Msa0374240 AT4G05160.1 28.033 239 136 9 419 649 309 519 5.73e-14 75.5
Msa0374240 AT1G77240.1 48.780 82 37 2 500 581 390 466 4.69e-13 72.8
Msa0374240 AT1G20480.1 33.537 164 92 7 422 579 333 485 4.71e-13 72.8
Msa0374240 AT1G21530.2 31.250 192 108 7 404 581 284 465 7.30e-13 72.0
Msa0374240 AT1G21530.1 34.839 155 79 6 441 581 317 463 2.61e-12 70.5
Msa0374240 AT3G48990.1 31.361 169 98 5 418 581 281 436 2.68e-12 70.1
Msa0374240 AT1G62940.1 25.348 359 177 15 245 584 179 465 4.55e-12 69.7
Msa0374240 AT3G21240.1 27.344 256 137 13 419 646 316 550 1.19e-11 68.2
Msa0374240 AT3G21230.1 26.423 246 153 10 419 647 331 565 6.12e-11 66.2

Find 194 sgRNAs with CRISPR-Local

Find 668 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTGGTGGTGCACCCCTTTC+TGG 0.130378 3_1:+73619047 Msa0374240:CDS
AATTGATAAACATGGTAAAA+AGG 0.232096 3_1:-73625803 None:intergenic
TGGTAGCTGGTTTGGTGCTT+GGG 0.253560 3_1:+73618944 Msa0374240:CDS
TTCTCCCAACGAAGCATAAA+TGG 0.267608 3_1:-73616556 None:intergenic
TTAACATATGTGGAAGGTTT+TGG 0.268361 3_1:-73620784 None:intergenic
TTTGAAAACACAACATTAGA+TGG 0.286308 3_1:+73615746 Msa0374240:five_prime_UTR
CCGCAAACGCCGCGGCTTAC+CGG 0.287825 3_1:+73616035 Msa0374240:CDS
AGAATGGTTTATTGCATTGC+AGG 0.308254 3_1:+73616392 Msa0374240:CDS
GCCGCGGCGTTTGCGGTTGT+TGG 0.320837 3_1:-73616028 None:intergenic
CTCATCCTGCATTGGATGAA+TGG 0.328825 3_1:+73624725 Msa0374240:CDS
ACTCAAGTTATTTAACAGTT+TGG 0.330171 3_1:-73625759 None:intergenic
GATGTATCGGTTAGAGTTAA+TGG 0.330847 3_1:-73618652 None:intergenic
CAGGTTGAGGCAGTTCTTCT+TGG 0.331599 3_1:+73624628 Msa0374240:intron
ATGAGTAACCATTCCGAGTT+TGG 0.332983 3_1:-73625647 None:intergenic
CTGGTTTGGTGCTTGGGGAT+TGG 0.338123 3_1:+73618950 Msa0374240:CDS
CGAAGGATGCAAGCGATTAA+TGG 0.338298 3_1:+73618924 Msa0374240:CDS
TGAGATCATTGATAGGAAAA+AGG 0.339564 3_1:+73624495 Msa0374240:CDS
TGCTGTAAAGGTTGATGAAC+GGG 0.340717 3_1:+73624417 Msa0374240:intron
ACATCCTTTGTCCCAAGTTC+AGG 0.343319 3_1:-73618431 None:intergenic
ATGGTAGCTGGTTTGGTGCT+TGG 0.343553 3_1:+73618943 Msa0374240:CDS
AAATCACTTGTAAATATTGC+TGG 0.347751 3_1:+73617959 Msa0374240:CDS
TCTTCTTGGCAGCCCCTTTG+TGG 0.359980 3_1:+73624642 Msa0374240:CDS
AATAACAAGAGAAAAGGTTT+TGG 0.360047 3_1:-73615829 None:intergenic
GCTTCTGGTTTGGCGAAGAT+TGG 0.360072 3_1:+73616324 Msa0374240:CDS
AGACCATATGCTTGACCTAT+TGG 0.362678 3_1:-73620694 None:intergenic
TGAATTGATCTCACGTGAAA+TGG 0.368695 3_1:+73616206 Msa0374240:CDS
GCGATTAATGGTAGCTGGTT+TGG 0.369688 3_1:+73618936 Msa0374240:CDS
TCATCCTGCATTGGATGAAT+GGG 0.370904 3_1:+73624726 Msa0374240:CDS
ATTAATGTTCATAATTCAAT+TGG 0.381560 3_1:-73615786 None:intergenic
GGCTGTTTCTCATCCTGCAT+TGG 0.384325 3_1:+73624717 Msa0374240:CDS
GCTGCTGTTGGAGGCTGTAT+AGG 0.394725 3_1:+73618619 Msa0374240:CDS
TGTTTGTTCAGGCTTGCTTC+CGG 0.400584 3_1:+73616514 Msa0374240:intron
AGATTCATCAACATTTGTCT+TGG 0.406370 3_1:+73619080 Msa0374240:CDS
ACAATGAACGCCTACATTGC+CGG 0.408215 3_1:+73615967 Msa0374240:exon
CCGGTAAGCCGCGGCGTTTG+CGG 0.410043 3_1:-73616035 None:intergenic
GTGAAAATTGTTCCTGAACT+TGG 0.412273 3_1:+73618419 Msa0374240:CDS
GATTCATCAACATTTGTCTT+GGG 0.413381 3_1:+73619081 Msa0374240:CDS
AACTGCAACATCAGCTGAAA+GGG 0.414993 3_1:-73618125 None:intergenic
CCTCGTGGTGAAATAGTAAT+TGG 0.418609 3_1:+73621978 Msa0374240:CDS
GTAGTTGAATATCCACCTTC+AGG 0.419524 3_1:-73621942 None:intergenic
GGAAGCAAAGAAGGCTCGTC+TGG 0.420989 3_1:+73625472 Msa0374240:intron
GTTGAAAACAAAGTAGTAAT+GGG 0.422478 3_1:-73615919 None:intergenic
TAGAATTTGTTTGCTGCTGT+TGG 0.423659 3_1:+73618607 Msa0374240:intron
AAAGAAGTAGCTCCTTTCAC+TGG 0.428483 3_1:-73625671 None:intergenic
AACATAATGTTGTCCACAAA+GGG 0.431416 3_1:-73624655 None:intergenic
TTCATCTTGGAGAGTATCAA+TGG 0.436487 3_1:+73616262 Msa0374240:CDS
GCCGACGTCGGCGGCGAACC+TGG 0.444746 3_1:+73616057 Msa0374240:CDS
AAAACCTTCCACATATGTTA+AGG 0.446570 3_1:+73620786 Msa0374240:CDS
GTGGTCCAAGTGTCACTCTT+GGG 0.449191 3_1:+73622000 Msa0374240:CDS
GACCCATGGACTCCTGAGAC+TGG 0.453555 3_1:+73625533 Msa0374240:CDS
AATTTGTTTGCTGCTGTTGG+AGG 0.455909 3_1:+73618610 Msa0374240:CDS
GTTACCATTTATGCTTCGTT+GGG 0.457080 3_1:+73616552 Msa0374240:CDS
TTTCGGTCGTAATTTATCTC+AGG 0.457430 3_1:+73625826 Msa0374240:three_prime_UTR
TGTTACCATTTATGCTTCGT+TGG 0.470259 3_1:+73616551 Msa0374240:CDS
TCTTTGTGAGTCACCAGAAA+GGG 0.471719 3_1:-73619060 None:intergenic
CCGCATCTGCTCAGCATGGA+TGG 0.477689 3_1:+73618038 Msa0374240:CDS
GCAGTAACTAGGCCAGTCTC+AGG 0.478808 3_1:-73625545 None:intergenic
GATGAAGAAAGGTTTATGAA+TGG 0.479275 3_1:-73615893 None:intergenic
GTTGCCTTGAGATCATTGAT+AGG 0.484550 3_1:+73624488 Msa0374240:CDS
TTAAATTGCTTTCTGACCCA+TGG 0.484569 3_1:+73625519 Msa0374240:CDS
GGTTCGCCGCCGACGTCGGC+CGG 0.487708 3_1:-73616054 None:intergenic
TGGTTGCGGACCGCGAAACC+AGG 0.488283 3_1:-73616075 None:intergenic
AAGTTCGAGAAGCTTCATCT+TGG 0.494487 3_1:+73616249 Msa0374240:CDS
TCTTAAGAGCTGCAGTAACT+AGG 0.495063 3_1:-73625556 None:intergenic
AGGCCAGTCTCAGGAGTCCA+TGG 0.497067 3_1:-73625536 None:intergenic
GGTAGCTGGTTTGGTGCTTG+GGG 0.497596 3_1:+73618945 Msa0374240:CDS
CCTTCCCAGAGTGAAGTTAA+CGG 0.498435 3_1:-73616111 None:intergenic
TGAAAGCAATGTAGAAAGAG+TGG 0.500301 3_1:-73615858 None:intergenic
CGAACACGATCAAGAATTGC+TGG 0.500340 3_1:-73618742 None:intergenic
AGTTGAAAACAAAGTAGTAA+TGG 0.500380 3_1:-73615920 None:intergenic
GAGTATCAATGGGTTACGTA+TGG 0.500959 3_1:+73616273 Msa0374240:CDS
TGCAAGCGATTAATGGTAGC+TGG 0.501413 3_1:+73618931 Msa0374240:CDS
GGTTGTTGGAGTTGCGGAAG+AGG 0.502140 3_1:-73616014 None:intergenic
AAGCCTTTCAACATCAGAAA+AGG 0.502433 3_1:-73618071 None:intergenic
TGAAAATTGTTCCTGAACTT+GGG 0.504500 3_1:+73618420 Msa0374240:CDS
CGCGGCTTACCGGCCGACGT+CGG 0.506121 3_1:+73616045 Msa0374240:CDS
GAAATGGAAACTTCTTCTGA+TGG 0.507585 3_1:+73616222 Msa0374240:CDS
GGTGGTCCAAGTGTCACTCT+TGG 0.507960 3_1:+73621999 Msa0374240:CDS
AAGTTACTGTGTGGCACTTG+TGG 0.512481 3_1:+73624696 Msa0374240:CDS
AATAACTACCTTAACATATG+TGG 0.514991 3_1:-73620794 None:intergenic
GTAATGGGAGTGATGAAGAA+AGG 0.515010 3_1:-73615904 None:intergenic
GGCTTACCGGCCGACGTCGG+CGG 0.515433 3_1:+73616048 Msa0374240:CDS
CATCTCCGTTAACTTCACTC+TGG 0.517195 3_1:+73616106 Msa0374240:CDS
GAGATGTGACGCGGTGGTTG+CGG 0.517808 3_1:-73616089 None:intergenic
TACGACCACCCAGAATTGCT+TGG 0.517811 3_1:-73619010 None:intergenic
AGCAAACCTCATTCAATGAA+TGG 0.518765 3_1:-73616590 None:intergenic
AGGTTGATGAACGGGGAATG+AGG 0.520598 3_1:+73624425 Msa0374240:intron
TGAGCAGATGCGGCATCAGA+TGG 0.520910 3_1:-73618028 None:intergenic
TTTGTGCCATTCATTGAATG+AGG 0.522906 3_1:+73616584 Msa0374240:CDS
AAAACACAACATTAGATGGA+TGG 0.524033 3_1:+73615750 Msa0374240:five_prime_UTR
CGGCGGCGAACCTGGTTTCG+CGG 0.524349 3_1:+73616065 Msa0374240:CDS
TGTTCCTGAACTTGGGACAA+AGG 0.527275 3_1:+73618427 Msa0374240:CDS
AATTCAAGAATATGAGCCAT+TGG 0.527773 3_1:-73618470 None:intergenic
GCATGGAGAATATGTGTCCC+TGG 0.530319 3_1:+73624534 Msa0374240:CDS
GCTCCAATAGGTCAAGCATA+TGG 0.531681 3_1:+73620691 Msa0374240:CDS
AACGATGAGGCCGGCAATGT+AGG 0.531894 3_1:-73615977 None:intergenic
AGGGGTAAATCAGCCTCGAT+AGG 0.532424 3_1:-73618106 None:intergenic
CGTGCATGCATACCTTTCCC+AGG 0.533958 3_1:-73624552 None:intergenic
CGCTTGCATCCTTCGTGCAT+AGG 0.534962 3_1:-73618916 None:intergenic
GTCATACAGGTAAATGCAAA+GGG 0.535324 3_1:+73618864 Msa0374240:intron
CGACGTCGGCCGGTAAGCCG+CGG 0.536999 3_1:-73616044 None:intergenic
ATATTTGCAGGAAGCAAAGA+AGG 0.537806 3_1:+73625463 Msa0374240:intron
ATCTTTGTGAGTCACCAGAA+AGG 0.538336 3_1:-73619061 None:intergenic
ATGCTGACACTAGAGAAGAA+TGG 0.546458 3_1:+73616376 Msa0374240:CDS
GTTTGGTAATCTACTCAACT+AGG 0.546922 3_1:-73625742 None:intergenic
TAACTGCAACATCAGCTGAA+AGG 0.546955 3_1:-73618126 None:intergenic
ATTCTTGATCGTGTTCGTGA+TGG 0.547019 3_1:+73618748 Msa0374240:CDS
ATGTACACAAGTGGAAGTAC+AGG 0.547355 3_1:+73618151 Msa0374240:CDS
CAAGTGATTTCAATTCTTTG+CGG 0.548594 3_1:-73617946 None:intergenic
GAAGCCCATTCATCCAATGC+AGG 0.549662 3_1:-73624730 None:intergenic
ACCAGGTTCGCCGCCGACGT+CGG 0.550810 3_1:-73616058 None:intergenic
CAGTTAATCGACTGGCCTGA+AGG 0.550964 3_1:+73621927 Msa0374240:intron
GGTGCATGCATCACTTGTAA+AGG 0.552621 3_1:+73624816 Msa0374240:CDS
AGTATCAATGGGTTACGTAT+GGG 0.553654 3_1:+73616274 Msa0374240:CDS
CCATCCATGCTGAGCAGATG+CGG 0.554020 3_1:-73618038 None:intergenic
TCATCTTGGAGAGTATCAAT+GGG 0.554276 3_1:+73616263 Msa0374240:CDS
CAACATAATGTTGTCCACAA+AGG 0.555949 3_1:-73624656 None:intergenic
GATGAATGGGCTTCAAAGCA+AGG 0.558170 3_1:+73624739 Msa0374240:CDS
GGCGGAAATAACAAGAGAAA+AGG 0.559134 3_1:-73615835 None:intergenic
CTCACGGAGACTTGTGCTGG+TGG 0.563040 3_1:+73620715 Msa0374240:CDS
GTTGGAGGCTGTATAGGATA+CGG 0.563483 3_1:+73618625 Msa0374240:CDS
CAAATAGACAAAACCAAACT+CGG 0.567418 3_1:+73625634 Msa0374240:exon
TTGCTGTAAAGGTTGATGAA+CGG 0.570020 3_1:+73624416 Msa0374240:intron
GAAAGCAATGTAGAAAGAGT+GGG 0.570023 3_1:-73615857 None:intergenic
ACTATTTCACCACGAGGCAT+CGG 0.570238 3_1:-73621972 None:intergenic
GACGAGAGGAACGATGAGGC+CGG 0.570309 3_1:-73615986 None:intergenic
ATCTCCGTTAACTTCACTCT+GGG 0.571471 3_1:+73616107 Msa0374240:CDS
GATACTTCTGTTGGCCGTGT+AGG 0.572271 3_1:+73620757 Msa0374240:CDS
GTAGGTAGATTTCATGCGGA+TGG 0.573162 3_1:+73624466 Msa0374240:CDS
AGACAAAACCAAACTCGGAA+TGG 0.579060 3_1:+73625639 Msa0374240:exon
TGGTTACTCATCCCAGTGAA+AGG 0.579672 3_1:+73625659 Msa0374240:three_prime_UTR
AGAATATGTGTCCCTGGGAA+AGG 0.579752 3_1:+73624540 Msa0374240:CDS
AAGAAGTAGCTCCTTTCACT+GGG 0.580914 3_1:-73625670 None:intergenic
CGTGGTGAAATAGTAATTGG+TGG 0.584455 3_1:+73621981 Msa0374240:CDS
GGTCTCACGGAGACTTGTGC+TGG 0.586067 3_1:+73620712 Msa0374240:CDS
GGGGTAAATCAGCCTCGATA+GGG 0.587669 3_1:-73618105 None:intergenic
GGTCATACAGGTAAATGCAA+AGG 0.587700 3_1:+73618863 Msa0374240:intron
GTTTGCGGTTGTTGGAGTTG+CGG 0.591559 3_1:-73616020 None:intergenic
TGGAAGTACAGGCTTGCCTA+AGG 0.592424 3_1:+73618162 Msa0374240:CDS
TGTTGGAGTTGCGGAAGAGG+AGG 0.592784 3_1:-73616011 None:intergenic
TAACAACAGTCACATTTCTC+CGG 0.594139 3_1:-73616533 None:intergenic
CATGGAGAATATGTGTCCCT+GGG 0.602792 3_1:+73624535 Msa0374240:CDS
GAGCAGATGCGGCATCAGAT+GGG 0.603021 3_1:-73618027 None:intergenic
GACATAGTTAAACTGCAGCA+TGG 0.605290 3_1:+73624517 Msa0374240:CDS
TTAATCGACTGGCCTGAAGG+TGG 0.607384 3_1:+73621930 Msa0374240:CDS
GAGGTTACAACTGTGATTTG+TGG 0.608937 3_1:+73617923 Msa0374240:CDS
CCGTTAACTTCACTCTGGGA+AGG 0.609584 3_1:+73616111 Msa0374240:CDS
GCAGTTATAATGTACACAAG+TGG 0.611172 3_1:+73618142 Msa0374240:CDS
CAAAGAAGAAACAGTGAAGG+AGG 0.611493 3_1:+73624795 Msa0374240:CDS
AAATACCCAAGAGTGACACT+TGG 0.612420 3_1:-73622005 None:intergenic
AGGTCAAGCATATGGTCTCA+CGG 0.613030 3_1:+73620699 Msa0374240:CDS
TGCATTGATGCCAACTGTGT+TGG 0.613469 3_1:+73618711 Msa0374240:CDS
GGCCAGTCTCAGGAGTCCAT+GGG 0.614285 3_1:-73625535 None:intergenic
TTTGGTAATCTACTCAACTA+GGG 0.614607 3_1:-73625741 None:intergenic
TGCAAAGGGAGGATTATCAA+AGG 0.615510 3_1:+73618878 Msa0374240:CDS
TCAATGGGTTACGTATGGGA+AGG 0.616385 3_1:+73616278 Msa0374240:CDS
GGAATGAGGTGGTTCTACAC+TGG 0.617625 3_1:+73624439 Msa0374240:CDS
ACTACCTTAACATATGTGGA+AGG 0.619062 3_1:-73620790 None:intergenic
GGTACAGCTACCAACACAGT+TGG 0.622382 3_1:-73618721 None:intergenic
TCACGGAGACTTGTGCTGGT+GGG 0.623476 3_1:+73620716 Msa0374240:CDS
CACAGTTGGCATCAATGCAG+TGG 0.624128 3_1:-73618707 None:intergenic
ATATCTAGCATACTTACCAA+TGG 0.624262 3_1:+73618454 Msa0374240:CDS
GATGCCGCATCTGCTCAGCA+TGG 0.624263 3_1:+73618034 Msa0374240:CDS
TATTCTTGAATTAATAGCTG+AGG 0.625070 3_1:+73618481 Msa0374240:CDS
AAAGACAAGAGAGTCTTGCA+AGG 0.633949 3_1:+73622040 Msa0374240:CDS
GCTGTAAAGGTTGATGAACG+GGG 0.640469 3_1:+73624418 Msa0374240:intron
TCCAACAACCGCAAACGCCG+CGG 0.640799 3_1:+73616027 Msa0374240:CDS
CAGCAAAGAAGAAACAGTGA+AGG 0.640861 3_1:+73624792 Msa0374240:CDS
CTTTGTGAGTCACCAGAAAG+GGG 0.655656 3_1:-73619059 None:intergenic
AATCATGATAGATTGTTACT+CGG 0.656134 3_1:+73616177 Msa0374240:CDS
TCTAACCGATACATCAAACA+AGG 0.656429 3_1:+73618660 Msa0374240:CDS
TTGATTTAGCCTATGCACGA+AGG 0.657974 3_1:+73618907 Msa0374240:CDS
GGTAATCTACTCAACTAGGG+TGG 0.659698 3_1:-73625738 None:intergenic
ACTGCAACATCAGCTGAAAG+GGG 0.666737 3_1:-73618124 None:intergenic
GTGCATGCATACCTTTCCCA+GGG 0.668654 3_1:-73624551 None:intergenic
TGGTAGAGAAAACCCTATCG+AGG 0.672136 3_1:+73618093 Msa0374240:CDS
GGAAGGCGTGACGACACTCG+CGG 0.672398 3_1:+73616128 Msa0374240:CDS
CGGAAGAGGAGGATGACGAG+AGG 0.672962 3_1:-73616000 None:intergenic
TGGTTCTACACTGGTGACGT+AGG 0.683274 3_1:+73624448 Msa0374240:CDS
CCAATTACTATTTCACCACG+AGG 0.684364 3_1:-73621978 None:intergenic
TGACGTAGGTAGATTTCATG+CGG 0.690923 3_1:+73624462 Msa0374240:CDS
GGACAACATTATGTTGCATG+CGG 0.691477 3_1:+73624663 Msa0374240:CDS
AAAATACATAACCGTCCCAG+AGG 0.700873 3_1:-73625702 None:intergenic
CAGGGTGTGATGATGACACA+TGG 0.701230 3_1:+73618368 Msa0374240:intron
ACTGACTCACCGATGCCTCG+TGG 0.702074 3_1:+73621963 Msa0374240:CDS
AAAGCAATGTAGAAAGAGTG+GGG 0.704149 3_1:-73615856 None:intergenic
ATACAGGTAAATGCAAAGGG+AGG 0.708230 3_1:+73618867 Msa0374240:intron
ACATAATGTTGTCCACAAAG+GGG 0.710014 3_1:-73624654 None:intergenic
TTGATGAACGGGGAATGAGG+TGG 0.714142 3_1:+73624428 Msa0374240:CDS
GGATGACGAGAGGAACGATG+AGG 0.715004 3_1:-73615990 None:intergenic
TTAACGGAGATGTGACGCGG+TGG 0.729075 3_1:-73616095 None:intergenic
AAGTTAACGGAGATGTGACG+CGG 0.733202 3_1:-73616098 None:intergenic
AAGGTCCAAGCAATTCTGGG+TGG 0.739493 3_1:+73619005 Msa0374240:CDS
GCAATGTAGAAAGAGTGGGG+CGG 0.808588 3_1:-73615853 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATAATAAATAAATTT+AGG - chr3_1:73621129-73621148 None:intergenic 0.0%
!!! AATCTTTGTTATAAAAATTT+TGG + chr3_1:73617113-73617132 Msa0374240:intron 10.0%
!!! CATTTTGAAAATAATTTTTA+TGG + chr3_1:73617326-73617345 Msa0374240:intron 10.0%
!! TTATAAAAATAAAAAGAGAA+AGG - chr3_1:73617536-73617555 None:intergenic 10.0%
!!! TCCTTTTTAATAATAAAATA+AGG + chr3_1:73619117-73619136 Msa0374240:intron 10.0%
!! ATGAATAAGTAAAAAAATAA+AGG - chr3_1:73619162-73619181 None:intergenic 10.0%
!! AAAAATAAAAAAATACCATT+AGG + chr3_1:73619223-73619242 Msa0374240:intron 10.0%
!! AAAATAAAAAAATACCATTA+GGG + chr3_1:73619224-73619243 Msa0374240:intron 10.0%
!! GAAAAAAAATAATAATATGT+GGG - chr3_1:73620632-73620651 None:intergenic 10.0%
!! AGAAAAAAAATAATAATATG+TGG - chr3_1:73620633-73620652 None:intergenic 10.0%
!! TATTAGGAAAAAAAAATATT+AGG - chr3_1:73621665-73621684 None:intergenic 10.0%
!! TAATAACAAATAACAATAAA+TGG - chr3_1:73622505-73622524 None:intergenic 10.0%
!!! TCATTTTATTTATTCTATTT+TGG + chr3_1:73622527-73622546 Msa0374240:intron 10.0%
!!! CATTTTATTTATTCTATTTT+GGG + chr3_1:73622528-73622547 Msa0374240:intron 10.0%
!!! TCATAATTATGTTTTTTTTT+TGG + chr3_1:73622823-73622842 Msa0374240:intron 10.0%
!!! CATAATTATGTTTTTTTTTT+GGG + chr3_1:73622824-73622843 Msa0374240:intron 10.0%
!! ATTAATGTTCATAATTCAAT+TGG - chr3_1:73615789-73615808 None:intergenic 15.0%
!!! ATATAATTAGGATACTTTTA+GGG - chr3_1:73616751-73616770 None:intergenic 15.0%
!!! TATATAATTAGGATACTTTT+AGG - chr3_1:73616752-73616771 None:intergenic 15.0%
!!! TGTATAAAAAAGTATTTTAC+TGG + chr3_1:73616777-73616796 Msa0374240:intron 15.0%
!! TTTAAATTCAAGATATGATA+TGG - chr3_1:73617152-73617171 None:intergenic 15.0%
!!! ATTTTCAAAATGAAATGAAA+GGG - chr3_1:73617318-73617337 None:intergenic 15.0%
!!! TATTTTCAAAATGAAATGAA+AGG - chr3_1:73617319-73617338 None:intergenic 15.0%
!!! GCCTTATTTTATTATTAAAA+AGG - chr3_1:73619121-73619140 None:intergenic 15.0%
!!! AACTTAACTTACTTTAATTT+GGG - chr3_1:73619774-73619793 None:intergenic 15.0%
!! AAACTTAACTTACTTTAATT+TGG - chr3_1:73619775-73619794 None:intergenic 15.0%
!!! TAAAGTAAGTTAAGTTTTTT+CGG + chr3_1:73619778-73619797 Msa0374240:intron 15.0%
!!! TCATTTTTTTTTTTTTCAGA+AGG - chr3_1:73620506-73620525 None:intergenic 15.0%
!!! TTATAACTGACAATAAATTT+TGG - chr3_1:73621176-73621195 None:intergenic 15.0%
!! TTGAATAAAACATTATTTGA+TGG - chr3_1:73621328-73621347 None:intergenic 15.0%
!!! TTTATTATTTTTGTTGAAGA+TGG - chr3_1:73621561-73621580 None:intergenic 15.0%
!! AAGAAAAAGAAGAATAAAAA+AGG - chr3_1:73622080-73622099 None:intergenic 15.0%
!!! TTGGATTGTTTATTTTATTT+AGG + chr3_1:73622448-73622467 Msa0374240:intron 15.0%
!!! TATTTAGGCTTTTAATTTTT+AGG + chr3_1:73622463-73622482 Msa0374240:intron 15.0%
!!! TTGGATTGTTTATTTTATTT+AGG + chr3_1:73622448-73622467 Msa0374240:intron 15.0%
!!! TATGACATTTTATTCTATTT+TGG + chr3_1:73622873-73622892 Msa0374240:intron 15.0%
!!! ATGACATTTTATTCTATTTT+GGG + chr3_1:73622874-73622893 Msa0374240:intron 15.0%
!!! TAATAATTGAAGGATAATTT+TGG - chr3_1:73623077-73623096 None:intergenic 15.0%
!!! AATCTTTGATATCAAATTTT+AGG - chr3_1:73623474-73623493 None:intergenic 15.0%
!!! ATTTAATTAAATTAGTCTTC+AGG - chr3_1:73624607-73624626 None:intergenic 15.0%
!! AGACTAATTTAATTAAATAC+AGG + chr3_1:73624609-73624628 Msa0374240:intron 15.0%
!!! ACTTTTTTTGTTATTAGAAA+AGG + chr3_1:73624895-73624914 Msa0374240:intron 15.0%
!! AACAGTAAAATTTAAACTTA+AGG + chr3_1:73624935-73624954 Msa0374240:intron 15.0%
!!! ATTTTTATGAAAATATTTGC+AGG + chr3_1:73625451-73625470 Msa0374240:intron 15.0%
!!! AATTCAATTGGTTTTATCAT+CGG - chr3_1:73615777-73615796 None:intergenic 20.0%
!!! TTTTGAAATTTGAACTTAGA+TGG + chr3_1:73616463-73616482 Msa0374240:intron 20.0%
!!! TACATTTTTTTTGTTTGTTC+AGG + chr3_1:73616503-73616522 Msa0374240:intron 20.0%
!!! AAAATTTTGGTAACGTATAT+AGG + chr3_1:73617126-73617145 Msa0374240:intron 20.0%
!!! AAGTTTTAAAGTTTATTTGC+CGG + chr3_1:73617611-73617630 Msa0374240:intron 20.0%
!!! TACTTTTAGATTTGTGTTTA+TGG + chr3_1:73617759-73617778 Msa0374240:intron 20.0%
!!! ACTTTTAGATTTGTGTTTAT+GGG + chr3_1:73617760-73617779 Msa0374240:intron 20.0%
!! ACAGTAAAATGAAGAAAAAA+AGG - chr3_1:73618324-73618343 None:intergenic 20.0%
!! ATAAGGCTAAAAATATTCTT+TGG + chr3_1:73619134-73619153 Msa0374240:intron 20.0%
!! TAAGGCTAAAAATATTCTTT+GGG + chr3_1:73619135-73619154 Msa0374240:intron 20.0%
!! TTCATAGTCTAAACTTTAAA+AGG - chr3_1:73619470-73619489 None:intergenic 20.0%
!!! TTTTATACGTTAGAATTTCT+TGG - chr3_1:73619738-73619757 None:intergenic 20.0%
!!! AACTTCTGAGTTTTATATTT+TGG - chr3_1:73619819-73619838 None:intergenic 20.0%
!!! TTTTTTTTAAAGGAGCAAAA+TGG + chr3_1:73620058-73620077 Msa0374240:intron 20.0%
!! ATAATAAATCTCACTTTCTA+TGG + chr3_1:73620425-73620444 Msa0374240:intron 20.0%
!! TAATAAATCTCACTTTCTAT+GGG + chr3_1:73620426-73620445 Msa0374240:intron 20.0%
!! AAAAAAAATGAAATTCACTC+AGG + chr3_1:73620515-73620534 Msa0374240:intron 20.0%
!! AAAAAATAATAATATGTGGG+TGG - chr3_1:73620629-73620648 None:intergenic 20.0%
!!! ATTCACACATTTTAAATTCA+AGG + chr3_1:73620829-73620848 Msa0374240:intron 20.0%
!!! TTCACACATTTTAAATTCAA+GGG + chr3_1:73620830-73620849 Msa0374240:intron 20.0%
!!! AAGTTCATGGAATATTTTTA+GGG - chr3_1:73621015-73621034 None:intergenic 20.0%
!!! TAAGTTCATGGAATATTTTT+AGG - chr3_1:73621016-73621035 None:intergenic 20.0%
!! AATAAATAAATTTAGGAACC+AGG - chr3_1:73621122-73621141 None:intergenic 20.0%
!! ATTAATCCTCAACTTATATA+TGG + chr3_1:73621254-73621273 Msa0374240:intron 20.0%
!! TTAATCCTCAACTTATATAT+GGG + chr3_1:73621255-73621274 Msa0374240:intron 20.0%
!! AGAAAATAAGTGATAGAAAT+GGG + chr3_1:73621352-73621371 Msa0374240:intron 20.0%
!!! ATAATATTGTTGTCTCTTTT+TGG - chr3_1:73621391-73621410 None:intergenic 20.0%
!!! TATTATTTGTCACTCATTTT+GGG - chr3_1:73621733-73621752 None:intergenic 20.0%
!!! TTTTATTCTTCTTTTTCTTG+TGG + chr3_1:73622081-73622100 Msa0374240:intron 20.0%
!!! TTGAATTTTAACACAATGTT+AGG + chr3_1:73622657-73622676 Msa0374240:intron 20.0%
!! ATAATAAACCTATCACATTA+AGG - chr3_1:73622735-73622754 None:intergenic 20.0%
!!! GGTTTATTATTTAGAACATT+TGG + chr3_1:73622745-73622764 Msa0374240:intron 20.0%
!!! GAATGTTTTACATCTATAAA+TGG + chr3_1:73622942-73622961 Msa0374240:intron 20.0%
!! ATTTCTCTCTTAATAATTGA+AGG - chr3_1:73623087-73623106 None:intergenic 20.0%
!! ATTATTAAGAGAGAAATGAT+TGG + chr3_1:73623090-73623109 Msa0374240:intron 20.0%
!! TTAATTATCTTCATCTAATC+CGG + chr3_1:73623117-73623136 Msa0374240:intron 20.0%
!!! CAAAGAAATATTGGAATTTT+TGG - chr3_1:73623584-73623603 None:intergenic 20.0%
!! AAAAAGAAGCAAAGAAATAT+TGG - chr3_1:73623593-73623612 None:intergenic 20.0%
!!! ATAATTTTCTCATTTCCAAT+AGG - chr3_1:73623618-73623637 None:intergenic 20.0%
!! TGGAAATGAGAAAATTATTA+CGG + chr3_1:73623620-73623639 Msa0374240:intron 20.0%
!! TTATAAATTCATATGTTGCA+TGG + chr3_1:73623683-73623702 Msa0374240:intron 20.0%
!! TTCACATATAAATACTCTTA+AGG + chr3_1:73623983-73624002 Msa0374240:intron 20.0%
!!! AATCAAGAATAATCTCATTT+TGG - chr3_1:73624269-73624288 None:intergenic 20.0%
!! ATTTAATTAAATACAGGTTG+AGG + chr3_1:73624615-73624634 Msa0374240:intron 20.0%
!!! TAAACGGATTTTAATACAAA+AGG - chr3_1:73624846-73624865 None:intergenic 20.0%
!!! TAAAAAGTACAAAATTGACT+AGG - chr3_1:73624965-73624984 None:intergenic 20.0%
!!! GTCAATTTTGTACTTTTTAT+CGG + chr3_1:73624966-73624985 Msa0374240:intron 20.0%
!! GTCAAACAAATATAATCTTA+GGG - chr3_1:73625009-73625028 None:intergenic 20.0%
!! AGTCAAACAAATATAATCTT+AGG - chr3_1:73625010-73625029 None:intergenic 20.0%
!! AATTGATAAACATGGTAAAA+AGG - chr3_1:73625806-73625825 None:intergenic 20.0%
!!! TACCATGTTTATCAATTTTT+CGG + chr3_1:73625809-73625828 Msa0374240:three_prime_UTR 20.0%
!! AATGTTGTGTTTTCAAATGT+GGG - chr3_1:73615743-73615762 None:intergenic 25.0%
!! TAATGTTGTGTTTTCAAATG+TGG - chr3_1:73615744-73615763 None:intergenic 25.0%
! TTTGAAAACACAACATTAGA+TGG + chr3_1:73615746-73615765 Msa0374240:five_prime_UTR 25.0%
!! AATAACAAGAGAAAAGGTTT+TGG - chr3_1:73615832-73615851 None:intergenic 25.0%
! GTTGAAAACAAAGTAGTAAT+GGG - chr3_1:73615922-73615941 None:intergenic 25.0%
! AGTTGAAAACAAAGTAGTAA+TGG - chr3_1:73615923-73615942 None:intergenic 25.0%
! AATCATGATAGATTGTTACT+CGG + chr3_1:73616177-73616196 Msa0374240:CDS 25.0%
!! ATTGTTGTGTGCAAAATTTT+AGG + chr3_1:73616638-73616657 Msa0374240:intron 25.0%
!!! TATGATATTTTTTGATCGCA+AGG + chr3_1:73617020-73617039 Msa0374240:intron 25.0%
! TAAAGATATACATATCCTAC+TGG + chr3_1:73617241-73617260 Msa0374240:intron 25.0%
! TAACAAGTGATATTGTTCAT+AGG + chr3_1:73617441-73617460 Msa0374240:intron 25.0%
!!! AGAACTTGTTAAAGAGAAAA+TGG - chr3_1:73617490-73617509 None:intergenic 25.0%
! AAAGTCAATTCTATTTCACA+TGG + chr3_1:73617638-73617657 Msa0374240:intron 25.0%
! CAATACTACTAGAAATTTAC+AGG - chr3_1:73617675-73617694 None:intergenic 25.0%
! GAACTAAATTACTAAAACGA+TGG - chr3_1:73617820-73617839 None:intergenic 25.0%
! AAATCACTTGTAAATATTGC+TGG + chr3_1:73617959-73617978 Msa0374240:CDS 25.0%
! TATTCTTGAATTAATAGCTG+AGG + chr3_1:73618481-73618500 Msa0374240:CDS 25.0%
!!! TTTTACCTTGTTTGATGTAT+CGG - chr3_1:73618668-73618687 None:intergenic 25.0%
! TACATCAAACAAGGTAAAAA+AGG + chr3_1:73618669-73618688 Msa0374240:CDS 25.0%
! ACATCAAACAAGGTAAAAAA+GGG + chr3_1:73618670-73618689 Msa0374240:CDS 25.0%
!! GAATTTTCTTGTCTTCAAAA+AGG + chr3_1:73618986-73619005 Msa0374240:CDS 25.0%
!!! ATATGCTTTTAGCTTTTAGA+AGG - chr3_1:73619195-73619214 None:intergenic 25.0%
!! TTTTCTTCCAGTAGTATATA+AGG + chr3_1:73619308-73619327 Msa0374240:intron 25.0%
! CAACTCATGGTTAATTTATA+GGG - chr3_1:73619404-73619423 None:intergenic 25.0%
! TCAACTCATGGTTAATTTAT+AGG - chr3_1:73619405-73619424 None:intergenic 25.0%
!!! TTGTTCTTTTGATGATGAAT+CGG + chr3_1:73619558-73619577 Msa0374240:intron 25.0%
! CAAAATAAACAGAAGTTCAT+AGG + chr3_1:73619975-73619994 Msa0374240:intron 25.0%
!!! AGCCACATGTTTTTTTTTAA+AGG + chr3_1:73620048-73620067 Msa0374240:intron 25.0%
!! CTCCTTTAAAAAAAAACATG+TGG - chr3_1:73620053-73620072 None:intergenic 25.0%
!!! TCCTTTAAGATTGTTTTTAC+CGG - chr3_1:73620138-73620157 None:intergenic 25.0%
! CAAACAAGCTAAAGTAAATA+TGG - chr3_1:73620237-73620256 None:intergenic 25.0%
! TTGTACAAAATTGAATTCCT+TGG - chr3_1:73620281-73620300 None:intergenic 25.0%
! TTGTGAATTATATGTTCAAC+TGG + chr3_1:73620384-73620403 Msa0374240:intron 25.0%
! ATTATTACTATCAACCATCA+AGG - chr3_1:73620410-73620429 None:intergenic 25.0%
! AATAACTACCTTAACATATG+TGG - chr3_1:73620797-73620816 None:intergenic 25.0%
!! GAATTTAAAATGTGTGAATG+TGG - chr3_1:73620828-73620847 None:intergenic 25.0%
!!! CTTTTACTTTTGCTGTTTAT+CGG + chr3_1:73620897-73620916 Msa0374240:intron 25.0%
! TCACAGTACTTAAATAGATA+TGG + chr3_1:73620922-73620941 Msa0374240:intron 25.0%
!!! AGTTCATGGAATATTTTTAG+GGG - chr3_1:73621014-73621033 None:intergenic 25.0%
!! ATAAATTTTGGATTTGCATG+AGG - chr3_1:73621164-73621183 None:intergenic 25.0%
! GGATTAATGATCACAATATA+TGG - chr3_1:73621242-73621261 None:intergenic 25.0%
! TTATATATGGGATACACAAA+GGG + chr3_1:73621267-73621286 Msa0374240:intron 25.0%
! GAGAAAATAAGTGATAGAAA+TGG + chr3_1:73621351-73621370 Msa0374240:intron 25.0%
!! CTATTATTTGTCACTCATTT+TGG - chr3_1:73621734-73621753 None:intergenic 25.0%
!!! AGAGTGTATTATTTCTGAAA+TGG + chr3_1:73621782-73621801 Msa0374240:intron 25.0%
!!! GAGTGTATTATTTCTGAAAT+GGG + chr3_1:73621783-73621802 Msa0374240:intron 25.0%
! AAGGTTTAGAGATGATAATA+TGG + chr3_1:73621839-73621858 Msa0374240:intron 25.0%
!! CATAAGAAATCTTTTTCCAA+AGG - chr3_1:73621885-73621904 None:intergenic 25.0%
! TCGAATATTAACACAATGTT+AGG + chr3_1:73622314-73622333 Msa0374240:intron 25.0%
!!! TGGTTTTATATCTAACAACT+GGG - chr3_1:73622361-73622380 None:intergenic 25.0%
!!! ATGGTTTTATATCTAACAAC+TGG - chr3_1:73622362-73622381 None:intergenic 25.0%
!!! GGTTTATGTTTTAGAACATT+TGG + chr3_1:73622402-73622421 Msa0374240:intron 25.0%
!!! TGGTTTTATATCTAACAACT+GGG - chr3_1:73622361-73622380 None:intergenic 25.0%
!!! ATGGTTTTATATCTAACAAC+TGG - chr3_1:73622362-73622381 None:intergenic 25.0%
! TAATTATCTTCATCTAATCC+GGG + chr3_1:73623118-73623137 Msa0374240:intron 25.0%
!! ATCTTTTTACAAAAGTAACC+CGG - chr3_1:73623139-73623158 None:intergenic 25.0%
!! TAGTTTGAAAAGAGTCTTAT+AGG + chr3_1:73623174-73623193 Msa0374240:intron 25.0%
!! AGTTTGAAAAGAGTCTTATA+GGG + chr3_1:73623175-73623194 Msa0374240:intron 25.0%
! TTTATATCAATCAACTATCC+AGG + chr3_1:73623363-73623382 Msa0374240:intron 25.0%
! TTATATCAATCAACTATCCA+GGG + chr3_1:73623364-73623383 Msa0374240:intron 25.0%
! TTATGACATTTCTTTGATTG+TGG - chr3_1:73623433-73623452 None:intergenic 25.0%
! TCTAGATGAGTATAGTATTT+GGG + chr3_1:73623660-73623679 Msa0374240:intron 25.0%
!!! CGAGATTTTTAGAAAAACTA+AGG + chr3_1:73623740-73623759 Msa0374240:intron 25.0%
!!! TTTTTAGAAAAACTAAGGCA+TGG + chr3_1:73623745-73623764 Msa0374240:intron 25.0%
!!! TTTTAGAAAAACTAAGGCAT+GGG + chr3_1:73623746-73623765 Msa0374240:intron 25.0%
! AGTATTTATATGTGAAGCAT+GGG - chr3_1:73623979-73623998 None:intergenic 25.0%
! ATGATTATCAAACTCTACAT+AGG + chr3_1:73624334-73624353 Msa0374240:intron 25.0%
! TGATTATCAAACTCTACATA+GGG + chr3_1:73624335-73624354 Msa0374240:intron 25.0%
!!! TTTTGCATTTTTTGCTGTAA+AGG + chr3_1:73624405-73624424 Msa0374240:intron 25.0%
!!! CATTACAACAAAGTTCTAAA+CGG - chr3_1:73624862-73624881 None:intergenic 25.0%
!!! GAACTTTGTTGTAATGTTTT+AGG + chr3_1:73624866-73624885 Msa0374240:intron 25.0%
! TTTGTTTGACTGTTAGAAAA+TGG + chr3_1:73625019-73625038 Msa0374240:intron 25.0%
! TTGTTTGACTGTTAGAAAAT+GGG + chr3_1:73625020-73625039 Msa0374240:intron 25.0%
! TTGCTTTGCATTAAAATATG+TGG + chr3_1:73625078-73625097 Msa0374240:intron 25.0%
! TGCTTTGCATTAAAATATGT+GGG + chr3_1:73625079-73625098 Msa0374240:intron 25.0%
!! TGATTTTTCATTCAAAAGCT+TGG + chr3_1:73625187-73625206 Msa0374240:intron 25.0%
! AAAGTGGAATACATGAAATA+GGG - chr3_1:73625225-73625244 None:intergenic 25.0%
! AAAAGTGGAATACATGAAAT+AGG - chr3_1:73625226-73625245 None:intergenic 25.0%
! TGATCATTAACTTAGTATAG+CGG + chr3_1:73625258-73625277 Msa0374240:intron 25.0%
!! TTAGTATGACATTGATAACT+TGG + chr3_1:73625335-73625354 Msa0374240:intron 25.0%
! ACTCAAGTTATTTAACAGTT+TGG - chr3_1:73625762-73625781 None:intergenic 25.0%
AAAACACAACATTAGATGGA+TGG + chr3_1:73615750-73615769 Msa0374240:five_prime_UTR 30.0%
GATGAAGAAAGGTTTATGAA+TGG - chr3_1:73615896-73615915 None:intergenic 30.0%
! CACACAACAATTTTCTGTTT+GGG - chr3_1:73616629-73616648 None:intergenic 30.0%
! ACAGATACGTTTAGAGTATT+CGG - chr3_1:73616689-73616708 None:intergenic 30.0%
TACTCTAAACGTATCTGTAT+TGG + chr3_1:73616691-73616710 Msa0374240:intron 30.0%
GATACATATCAGATACTTCA+AGG + chr3_1:73616799-73616818 Msa0374240:intron 30.0%
CATATCTAGCATACATATCT+TGG + chr3_1:73616835-73616854 Msa0374240:intron 30.0%
GGATATATGTGAGAAATTAG+TGG + chr3_1:73616856-73616875 Msa0374240:intron 30.0%
ATATACATATCCTACTGGTA+TGG + chr3_1:73617246-73617265 Msa0374240:intron 30.0%
TCATATTATGCCATCTAATG+AGG - chr3_1:73617355-73617374 None:intergenic 30.0%
GATGGCATAATATGAATGAT+CGG + chr3_1:73617360-73617379 Msa0374240:intron 30.0%
ATGGAAAAGAAATAAAGCCT+CGG - chr3_1:73617471-73617490 None:intergenic 30.0%
! AATAGAATTGACTTTCTTGC+CGG - chr3_1:73617633-73617652 None:intergenic 30.0%
CAAGTGATTTCAATTCTTTG+CGG - chr3_1:73617949-73617968 None:intergenic 30.0%
! TTTCCTTTTCTGATGTTGAA+AGG + chr3_1:73618068-73618087 Msa0374240:CDS 30.0%
GAGATATATTGTCATTCTAG+TGG + chr3_1:73618199-73618218 Msa0374240:intron 30.0%
! TTTTCTTTCTATCCTTTCAC+AGG + chr3_1:73618226-73618245 Msa0374240:intron 30.0%
! AATCTCTTTTCTTTTGCACA+GGG + chr3_1:73618350-73618369 Msa0374240:intron 30.0%
TGAAAATTGTTCCTGAACTT+GGG + chr3_1:73618420-73618439 Msa0374240:CDS 30.0%
ATATCTAGCATACTTACCAA+TGG + chr3_1:73618454-73618473 Msa0374240:CDS 30.0%
AATTCAAGAATATGAGCCAT+TGG - chr3_1:73618473-73618492 None:intergenic 30.0%
TTTGTCAAAACATGCAAGAT+AGG - chr3_1:73618572-73618591 None:intergenic 30.0%
CATCAAACAAGGTAAAAAAG+GGG + chr3_1:73618671-73618690 Msa0374240:CDS 30.0%
! CGTATTCGTTTTATACTATG+TGG + chr3_1:73619029-73619048 Msa0374240:CDS 30.0%
! ATTCGTTTTATACTATGTGG+TGG + chr3_1:73619032-73619051 Msa0374240:CDS 30.0%
AGATTCATCAACATTTGTCT+TGG + chr3_1:73619080-73619099 Msa0374240:CDS 30.0%
GATTCATCAACATTTGTCTT+GGG + chr3_1:73619081-73619100 Msa0374240:CDS 30.0%
GAAAAGAAAACAGATTCTTC+AGG - chr3_1:73619293-73619312 None:intergenic 30.0%
AAAAATCAGTAGTCTTTGCT+TGG - chr3_1:73619362-73619381 None:intergenic 30.0%
! AAATTAACCATGAGTTGAGA+AGG + chr3_1:73619407-73619426 Msa0374240:intron 30.0%
!!! AGTTTTTTCGGTTTCTTCAT+AGG + chr3_1:73619790-73619809 Msa0374240:intron 30.0%
TGCTGTAACAGATATGTTAT+GGG - chr3_1:73619900-73619919 None:intergenic 30.0%
TTGCTGTAACAGATATGTTA+TGG - chr3_1:73619901-73619920 None:intergenic 30.0%
! TATTTTGTGAAATCACAGTG+CGG - chr3_1:73619962-73619981 None:intergenic 30.0%
AGGAAAAAATATCCTCAAAG+TGG + chr3_1:73619995-73620014 Msa0374240:intron 30.0%
!!! AAGATTGTTTTTACCGGTAT+TGG - chr3_1:73620132-73620151 None:intergenic 30.0%
ACCGGTAAAAACAATCTTAA+AGG + chr3_1:73620134-73620153 Msa0374240:intron 30.0%
!!! TCGTGGTTTTTTAAGTTTGA+CGG - chr3_1:73620176-73620195 None:intergenic 30.0%
TGATGTTTCTTTGTGAACAT+AGG - chr3_1:73620210-73620229 None:intergenic 30.0%
! TTAACATATGTGGAAGGTTT+TGG - chr3_1:73620787-73620806 None:intergenic 30.0%
AAAACCTTCCACATATGTTA+AGG + chr3_1:73620786-73620805 Msa0374240:CDS 30.0%
CAGCAAAAGTAAAAGGAAAA+AGG - chr3_1:73620892-73620911 None:intergenic 30.0%
CGATAAACAGCAAAAGTAAA+AGG - chr3_1:73620899-73620918 None:intergenic 30.0%
CATATTATCACTGCACTTAT+AGG + chr3_1:73620967-73620986 Msa0374240:intron 30.0%
!!! GTTCATGGAATATTTTTAGG+GGG - chr3_1:73621013-73621032 None:intergenic 30.0%
!! TGCAGTGCTTTCTTTTATTT+AGG + chr3_1:73621056-73621075 Msa0374240:intron 30.0%
! TTGTCAGTTATAACAGCTTT+TGG + chr3_1:73621183-73621202 Msa0374240:intron 30.0%
! TGTCAGTTATAACAGCTTTT+GGG + chr3_1:73621184-73621203 Msa0374240:intron 30.0%
TGTATCCCATATATAAGTTG+AGG - chr3_1:73621263-73621282 None:intergenic 30.0%
CTTATATATGGGATACACAA+AGG + chr3_1:73621266-73621285 Msa0374240:intron 30.0%
! ATATTGTTGTCTCTTTTTGG+AGG - chr3_1:73621388-73621407 None:intergenic 30.0%
TATTTCATTCTCCATGAGAA+GGG + chr3_1:73621470-73621489 Msa0374240:intron 30.0%
!!! AATTTTAAGGCCAAGAAGTT+GGG - chr3_1:73621595-73621614 None:intergenic 30.0%
! CAAAGTCCTGATGAATTTTA+AGG - chr3_1:73621608-73621627 None:intergenic 30.0%
!! TGTATTATTTCTGAAATGGG+AGG + chr3_1:73621786-73621805 Msa0374240:intron 30.0%
GGATGTATTTGCTTAAAAGA+AGG + chr3_1:73621820-73621839 Msa0374240:intron 30.0%
GTTTAGAGATGATAATATGG+TGG + chr3_1:73621842-73621861 Msa0374240:intron 30.0%
!! TTATTTTACCTATCTGCCTT+TGG + chr3_1:73621866-73621885 Msa0374240:intron 30.0%
GGAAAAAGATTTCTTATGCA+AGG + chr3_1:73621887-73621906 Msa0374240:intron 30.0%
AGATTTCTTATGCAAGGATT+TGG + chr3_1:73621893-73621912 Msa0374240:intron 30.0%
! ACCTAATAGCTTAAGCTTTT+AGG + chr3_1:73622203-73622222 Msa0374240:intron 30.0%
TCCTAAAAGCTTAAGCTATT+AGG - chr3_1:73622207-73622226 None:intergenic 30.0%
ATATTAACACAATGTTAGGC+AGG + chr3_1:73622318-73622337 Msa0374240:intron 30.0%
TTATATCTAACAACTGGGTA+GGG - chr3_1:73622356-73622375 None:intergenic 30.0%
TTTATATCTAACAACTGGGT+AGG - chr3_1:73622357-73622376 None:intergenic 30.0%
AAACCATTCATGAATCTTAC+CGG + chr3_1:73622375-73622394 Msa0374240:intron 30.0%
TGGGTTATCTTATTCCAATT+TGG + chr3_1:73622547-73622566 Msa0374240:intron 30.0%
GGGTTATCTTATTCCAATTT+GGG + chr3_1:73622548-73622567 Msa0374240:intron 30.0%
ATCCTTACTGTTCACTTTAA+AGG - chr3_1:73622623-73622642 None:intergenic 30.0%
! AACAGTAAGGATCTTTGAAA+CGG + chr3_1:73622631-73622650 Msa0374240:intron 30.0%
!! ATTTTAACACAATGTTAGGC+AGG + chr3_1:73622661-73622680 Msa0374240:intron 30.0%
TTATATCTAACAACTGGGTT+GGG - chr3_1:73622699-73622718 None:intergenic 30.0%
TTTATATCTAACAACTGGGT+TGG - chr3_1:73622357-73622376 None:intergenic 30.0%
ATCACATTAAGGTTCATGAA+TGG - chr3_1:73622724-73622743 None:intergenic 30.0%
TTCATGAACCTTAATGTGAT+AGG + chr3_1:73622724-73622743 Msa0374240:intron 30.0%
TGGGTTATCTTATTCCAATT+TGG + chr3_1:73622547-73622566 Msa0374240:intron 30.0%
GGGTTATCTTATTCCAATTT+GGG + chr3_1:73622548-73622567 Msa0374240:intron 30.0%
AAACTATTTGTGACCCAAAT+TGG - chr3_1:73622910-73622929 None:intergenic 30.0%
TTGGGTCACAAATAGTTTAT+TGG + chr3_1:73622912-73622931 Msa0374240:intron 30.0%
TGGGTCACAAATAGTTTATT+GGG + chr3_1:73622913-73622932 Msa0374240:intron 30.0%
! TCAAGAGGGTTTTACATATA+GGG + chr3_1:73623211-73623230 Msa0374240:intron 30.0%
AACTCAATATCATACTACCT+CGG - chr3_1:73623238-73623257 None:intergenic 30.0%
!!! GAAATATTGGAATTTTTGGC+AGG - chr3_1:73623580-73623599 None:intergenic 30.0%
! TTTGCTTCTTTTTGTCCTAT+TGG + chr3_1:73623600-73623619 Msa0374240:intron 30.0%
CTCTAGATGAGTATAGTATT+TGG + chr3_1:73623659-73623678 Msa0374240:intron 30.0%
CATCACAAATCAAAAGAGTT+AGG + chr3_1:73623845-73623864 Msa0374240:intron 30.0%
GAAATAAATATACACAGCCA+AGG + chr3_1:73623867-73623886 Msa0374240:intron 30.0%
GAGTATTTATATGTGAAGCA+TGG - chr3_1:73623980-73623999 None:intergenic 30.0%
! GTTTGAGATACACTCTAAAA+AGG - chr3_1:73624202-73624221 None:intergenic 30.0%
AAGCGTGCTACATTTATTAA+GGG + chr3_1:73624234-73624253 Msa0374240:intron 30.0%
TTTAAGTGTTTACACTACCA+AGG + chr3_1:73624293-73624312 Msa0374240:intron 30.0%
TTAAGTGTTTACACTACCAA+GGG + chr3_1:73624294-73624313 Msa0374240:intron 30.0%
! TGTAGAGTTTGATAATCATC+TGG - chr3_1:73624333-73624352 None:intergenic 30.0%
! TTTTCCTATCAATGATCTCA+AGG - chr3_1:73624495-73624514 None:intergenic 30.0%
TGAGATCATTGATAGGAAAA+AGG + chr3_1:73624495-73624514 Msa0374240:CDS 30.0%
AACATAATGTTGTCCACAAA+GGG - chr3_1:73624658-73624677 None:intergenic 30.0%
! TTCTTTTCAAAGTTACTGTG+TGG + chr3_1:73624687-73624706 Msa0374240:CDS 30.0%
TGTTTGACTGTTAGAAAATG+GGG + chr3_1:73625021-73625040 Msa0374240:intron 30.0%
CATTAAAATATGTGGGATGA+TGG + chr3_1:73625086-73625105 Msa0374240:intron 30.0%
CAAAAGAACAAAAATTCGAG+TGG - chr3_1:73625141-73625160 None:intergenic 30.0%
TCATTTGAGAATGTGAAAAG+TGG - chr3_1:73625241-73625260 None:intergenic 30.0%
ATACAAATTCATAACGTACC+TGG + chr3_1:73625281-73625300 Msa0374240:intron 30.0%
!! GAAAGCAATTTAAGTTTTGC+AGG - chr3_1:73625512-73625531 None:intergenic 30.0%
CAAATAGACAAAACCAAACT+CGG + chr3_1:73625634-73625653 Msa0374240:exon 30.0%
!!! ACTTCTTTTAGTTTTTCCTC+TGG + chr3_1:73625686-73625705 Msa0374240:three_prime_UTR 30.0%
!!! CTTCTTTTAGTTTTTCCTCT+GGG + chr3_1:73625687-73625706 Msa0374240:three_prime_UTR 30.0%
! TTTGGTAATCTACTCAACTA+GGG - chr3_1:73625744-73625763 None:intergenic 30.0%
GACCGAAAAATTGATAAACA+TGG - chr3_1:73625814-73625833 None:intergenic 30.0%
AAAGCAATGTAGAAAGAGTG+GGG - chr3_1:73615859-73615878 None:intergenic 35.0%
GAAAGCAATGTAGAAAGAGT+GGG - chr3_1:73615860-73615879 None:intergenic 35.0%
TGAAAGCAATGTAGAAAGAG+TGG - chr3_1:73615861-73615880 None:intergenic 35.0%
TGAATTGATCTCACGTGAAA+TGG + chr3_1:73616206-73616225 Msa0374240:CDS 35.0%
GAAATGGAAACTTCTTCTGA+TGG + chr3_1:73616222-73616241 Msa0374240:CDS 35.0%
!! TTCATCTTGGAGAGTATCAA+TGG + chr3_1:73616262-73616281 Msa0374240:CDS 35.0%
!! TCATCTTGGAGAGTATCAAT+GGG + chr3_1:73616263-73616282 Msa0374240:CDS 35.0%
!! AGTATCAATGGGTTACGTAT+GGG + chr3_1:73616274-73616293 Msa0374240:CDS 35.0%
AGAATGGTTTATTGCATTGC+AGG + chr3_1:73616392-73616411 Msa0374240:CDS 35.0%
TAACAACAGTCACATTTCTC+CGG - chr3_1:73616536-73616555 None:intergenic 35.0%
TGTTACCATTTATGCTTCGT+TGG + chr3_1:73616551-73616570 Msa0374240:CDS 35.0%
GTTACCATTTATGCTTCGTT+GGG + chr3_1:73616552-73616571 Msa0374240:CDS 35.0%
! TTTGTGCCATTCATTGAATG+AGG + chr3_1:73616584-73616603 Msa0374240:CDS 35.0%
AGCAAACCTCATTCAATGAA+TGG - chr3_1:73616593-73616612 None:intergenic 35.0%
! AATTTTCTGTTTGGGAAGAG+TGG - chr3_1:73616621-73616640 None:intergenic 35.0%
! GCACACAACAATTTTCTGTT+TGG - chr3_1:73616630-73616649 None:intergenic 35.0%
ACTCATACTTTGCAGATACT+TGG + chr3_1:73616716-73616735 Msa0374240:intron 35.0%
CTCATACTTTGCAGATACTT+GGG + chr3_1:73616717-73616736 Msa0374240:intron 35.0%
TCATACTTTGCAGATACTTG+GGG + chr3_1:73616718-73616737 Msa0374240:intron 35.0%
GAAATTAGTGGAGATGTAAG+CGG + chr3_1:73616868-73616887 Msa0374240:intron 35.0%
AAATTAGTGGAGATGTAAGC+GGG + chr3_1:73616869-73616888 Msa0374240:intron 35.0%
TTTATGGACACCTCATTAGA+TGG + chr3_1:73617342-73617361 Msa0374240:intron 35.0%
!! ACTGAGTTTGCAAGTTTTGT+TGG + chr3_1:73617410-73617429 Msa0374240:intron 35.0%
!!! CTGAGTTTGCAAGTTTTGTT+GGG + chr3_1:73617411-73617430 Msa0374240:intron 35.0%
ACTGCTCAACATGTAATTTC+TGG + chr3_1:73617577-73617596 Msa0374240:intron 35.0%
CAATGCTGCTAGAAATTTAC+AGG - chr3_1:73617734-73617753 None:intergenic 35.0%
AAGCCTTTCAACATCAGAAA+AGG - chr3_1:73618074-73618093 None:intergenic 35.0%
! TTTTCTGATGTTGAAAGGCT+TGG + chr3_1:73618073-73618092 Msa0374240:CDS 35.0%
GCAGTTATAATGTACACAAG+TGG + chr3_1:73618142-73618161 Msa0374240:CDS 35.0%
TCAAAGATGCTTCTAACCTT+AGG - chr3_1:73618181-73618200 None:intergenic 35.0%
TAGACTCTAGGCTACTATTT+AGG - chr3_1:73618261-73618280 None:intergenic 35.0%
! GAATCTCTTTTCTTTTGCAC+AGG + chr3_1:73618349-73618368 Msa0374240:intron 35.0%
GTGAAAATTGTTCCTGAACT+TGG + chr3_1:73618419-73618438 Msa0374240:CDS 35.0%
CAGTAACACTTCAGCATATA+GGG + chr3_1:73618514-73618533 Msa0374240:intron 35.0%
! TAGAATTTGTTTGCTGCTGT+TGG + chr3_1:73618607-73618626 Msa0374240:intron 35.0%
!! GATGTATCGGTTAGAGTTAA+TGG - chr3_1:73618655-73618674 None:intergenic 35.0%
TCTAACCGATACATCAAACA+AGG + chr3_1:73618660-73618679 Msa0374240:CDS 35.0%
AAGGTAAAAAAGGGGACAAA+AGG + chr3_1:73618679-73618698 Msa0374240:CDS 35.0%
AGGTAAAAAAGGGGACAAAA+GGG + chr3_1:73618680-73618699 Msa0374240:CDS 35.0%
GTCATACAGGTAAATGCAAA+GGG + chr3_1:73618864-73618883 Msa0374240:intron 35.0%
AAAAAGGTCCAAGCAATTCT+GGG + chr3_1:73619002-73619021 Msa0374240:CDS 35.0%
AAATACCATTAGGGAAGAGT+AGG + chr3_1:73619233-73619252 Msa0374240:intron 35.0%
GAAGAGTAGGAGTAAAACAA+TGG + chr3_1:73619246-73619265 Msa0374240:intron 35.0%
CTTCCAGTAGTATATAAGGT+CGG + chr3_1:73619312-73619331 Msa0374240:intron 35.0%
TTCCAGTAGTATATAAGGTC+GGG + chr3_1:73619313-73619332 Msa0374240:intron 35.0%
TTAATTTATAGGGAGCTGAG+TGG - chr3_1:73619394-73619413 None:intergenic 35.0%
TCTGTCATAAGTTATGACCA+TGG + chr3_1:73619491-73619510 Msa0374240:intron 35.0%
!!! TTCTTTTGATGATGAATCGG+TGG + chr3_1:73619561-73619580 Msa0374240:intron 35.0%
ATAGCTTAAAGGACCAAATC+CGG - chr3_1:73619655-73619674 None:intergenic 35.0%
! GATTTGGTCCTTTAAGCTAT+TGG + chr3_1:73619655-73619674 Msa0374240:intron 35.0%
TGAAAGGACCAATAGCTTAA+AGG - chr3_1:73619666-73619685 None:intergenic 35.0%
GGTTTATGAAGATGATGAAG+AGG - chr3_1:73619717-73619736 None:intergenic 35.0%
AACAGATATGTTATGGGGTT+GGG - chr3_1:73619894-73619913 None:intergenic 35.0%
TAACAGATATGTTATGGGGT+TGG - chr3_1:73619895-73619914 None:intergenic 35.0%
GCTGTAACAGATATGTTATG+GGG - chr3_1:73619899-73619918 None:intergenic 35.0%
AAAGCTCATGGTCTTTCTTA+GGG - chr3_1:73619926-73619945 None:intergenic 35.0%
! AAAAAAGTGTGGAAAGCTCA+TGG - chr3_1:73619938-73619957 None:intergenic 35.0%
ATATCCTCAAAGTGGTTTAG+AGG + chr3_1:73620003-73620022 Msa0374240:intron 35.0%
ATATCCTCTAAACCACTTTG+AGG - chr3_1:73620010-73620029 None:intergenic 35.0%
!!! TGCGCATTTTGAGACTTAAA+AGG + chr3_1:73620105-73620124 Msa0374240:intron 35.0%
AGACTTAAAAGGACCAATAC+CGG + chr3_1:73620116-73620135 Msa0374240:intron 35.0%
ACAATCTTAAAGGACCAATC+TGG + chr3_1:73620144-73620163 Msa0374240:intron 35.0%
!!! TTTGACGGTTTTTTCCAGAT+TGG - chr3_1:73620161-73620180 None:intergenic 35.0%
AAATGAAATTCACTCAGGAC+TGG + chr3_1:73620520-73620539 Msa0374240:intron 35.0%
!! GATTTTGACGATACTTCTGT+TGG + chr3_1:73620748-73620767 Msa0374240:CDS 35.0%
ACTACCTTAACATATGTGGA+AGG - chr3_1:73620793-73620812 None:intergenic 35.0%
GATGGCTGAGTAAATTCTTT+GGG - chr3_1:73621310-73621329 None:intergenic 35.0%
TGATGGCTGAGTAAATTCTT+TGG - chr3_1:73621311-73621330 None:intergenic 35.0%
TGACATTGAACAGCAATACT+TGG - chr3_1:73621440-73621459 None:intergenic 35.0%
TGGAGAATGAAATAGGATTC+AGG - chr3_1:73621464-73621483 None:intergenic 35.0%
CTTCTCATGGAGAATGAAAT+AGG - chr3_1:73621471-73621490 None:intergenic 35.0%
CTATTTCATTCTCCATGAGA+AGG + chr3_1:73621469-73621488 Msa0374240:intron 35.0%
TTGTTGATCCAATTGCTTTG+TGG - chr3_1:73621496-73621515 None:intergenic 35.0%
!!! GAATTTTAAGGCCAAGAAGT+TGG - chr3_1:73621596-73621615 None:intergenic 35.0%
!! TCTTGGCCTTAAAATTCATC+AGG + chr3_1:73621599-73621618 Msa0374240:intron 35.0%
! ATGTGGAATTTTCTGTATGC+AGG + chr3_1:73621631-73621650 Msa0374240:intron 35.0%
! TCTGAAATGGGAGGAATATA+CGG + chr3_1:73621795-73621814 Msa0374240:intron 35.0%
! ATCTTTTTCCAAAGGCAGAT+AGG - chr3_1:73621877-73621896 None:intergenic 35.0%
! TCTTTTCTCAGTTAATCGAC+TGG + chr3_1:73621919-73621938 Msa0374240:intron 35.0%
! TCTTTTTCTTGTGGAGCAAA+AGG + chr3_1:73622090-73622109 Msa0374240:intron 35.0%
CACAAGAACTAACAAAGCAA+TGG - chr3_1:73622156-73622175 None:intergenic 35.0%
ACTTTCGTTTCAAAGAACAG+AGG - chr3_1:73622295-73622314 None:intergenic 35.0%
AACCATTCATGAATCTTACC+GGG + chr3_1:73622376-73622395 Msa0374240:intron 35.0%
! TCTAAAACATAAACCTGTCC+CGG - chr3_1:73622397-73622416 None:intergenic 35.0%
AAACTATTCGTGTCCCAAAT+TGG - chr3_1:73622564-73622583 None:intergenic 35.0%
TTGGGACACGAATAGTTTAT+TGG + chr3_1:73622566-73622585 Msa0374240:intron 35.0%
TGGGACACGAATAGTTTATT+GGG + chr3_1:73622567-73622586 Msa0374240:intron 35.0%
!! CACCTTTAAAGTGAACAGTA+AGG + chr3_1:73622618-73622637 Msa0374240:intron 35.0%
GGGTCACAAATAGTTTATTG+GGG + chr3_1:73622914-73622933 Msa0374240:intron 35.0%
! ACTTTTAGTGCGAACATTTG+AGG + chr3_1:73622965-73622984 Msa0374240:intron 35.0%
TATTGTGAACAATTGCGCTT+TGG - chr3_1:73623042-73623061 None:intergenic 35.0%
GACAGGAAAAATTGTCAAGA+GGG + chr3_1:73623197-73623216 Msa0374240:intron 35.0%
! GTCAAGAGGGTTTTACATAT+AGG + chr3_1:73623210-73623229 Msa0374240:intron 35.0%
AAACCTAGGATACTCATCTA+GGG - chr3_1:73623307-73623326 None:intergenic 35.0%
TAAACCTAGGATACTCATCT+AGG - chr3_1:73623308-73623327 None:intergenic 35.0%
GATGAGTATCCTAGGTTTAT+CGG + chr3_1:73623309-73623328 Msa0374240:intron 35.0%
AACAAAACACCGATAAACCT+AGG - chr3_1:73623321-73623340 None:intergenic 35.0%
TTGTTAAATGAAATGCACCC+TGG - chr3_1:73623384-73623403 None:intergenic 35.0%
!!! CATGTTCCATCCACTTTTTT+TGG + chr3_1:73623510-73623529 Msa0374240:intron 35.0%
TTCATATGTTGCATGGATGT+AGG + chr3_1:73623690-73623709 Msa0374240:intron 35.0%
TATACACAGCCAAGGAAATT+AGG + chr3_1:73623875-73623894 Msa0374240:intron 35.0%
TCTTTCTGTCCTAATTTCCT+TGG - chr3_1:73623887-73623906 None:intergenic 35.0%
AAGGAAATTAGGACAGAAAG+AGG + chr3_1:73623886-73623905 Msa0374240:intron 35.0%
!!! TGGTACTGGTATGACAATTT+TGG + chr3_1:73623949-73623968 Msa0374240:intron 35.0%
! TCCTTATGCAACTAGACTTT+TGG + chr3_1:73624007-73624026 Msa0374240:intron 35.0%
TCCAAAAGTCTAGTTGCATA+AGG - chr3_1:73624011-73624030 None:intergenic 35.0%
GAAGCGTGCTACATTTATTA+AGG + chr3_1:73624233-73624252 Msa0374240:intron 35.0%
TAAGTGTTTACACTACCAAG+GGG + chr3_1:73624295-73624314 Msa0374240:intron 35.0%
!! TTGCTGTAAAGGTTGATGAA+CGG + chr3_1:73624416-73624435 Msa0374240:intron 35.0%
!! AGTCTTCAGGTATTGAGAAT+GGG - chr3_1:73624594-73624613 None:intergenic 35.0%
!! TAGTCTTCAGGTATTGAGAA+TGG - chr3_1:73624595-73624614 None:intergenic 35.0%
ACATAATGTTGTCCACAAAG+GGG - chr3_1:73624657-73624676 None:intergenic 35.0%
CAACATAATGTTGTCCACAA+AGG - chr3_1:73624659-73624678 None:intergenic 35.0%
! GAAAGCATATTTCAGCTCAT+TGG + chr3_1:73625108-73625127 Msa0374240:intron 35.0%
AAGAACAAAAATTCGAGTGG+TGG - chr3_1:73625138-73625157 None:intergenic 35.0%
ATATTTGCAGGAAGCAAAGA+AGG + chr3_1:73625463-73625482 Msa0374240:intron 35.0%
TTAAATTGCTTTCTGACCCA+TGG + chr3_1:73625519-73625538 Msa0374240:CDS 35.0%
!!! CGAGTTTGGTTTTGTCTATT+TGG - chr3_1:73625636-73625655 None:intergenic 35.0%
!!! TTTTAGTTTTTCCTCTGGGA+CGG + chr3_1:73625691-73625710 Msa0374240:three_prime_UTR 35.0%
! GTTTGGTAATCTACTCAACT+AGG - chr3_1:73625745-73625764 None:intergenic 35.0%
GGCGGAAATAACAAGAGAAA+AGG - chr3_1:73615838-73615857 None:intergenic 40.0%
! GTAATGGGAGTGATGAAGAA+AGG - chr3_1:73615907-73615926 None:intergenic 40.0%
ATCTCCGTTAACTTCACTCT+GGG + chr3_1:73616107-73616126 Msa0374240:CDS 40.0%
AAGTTCGAGAAGCTTCATCT+TGG + chr3_1:73616249-73616268 Msa0374240:CDS 40.0%
!! GAGTATCAATGGGTTACGTA+TGG + chr3_1:73616273-73616292 Msa0374240:CDS 40.0%
! TCTGTTTGCAGTTTTGCTTC+TGG + chr3_1:73616309-73616328 Msa0374240:CDS 40.0%
!! TTGCAGTTTTGCTTCTGGTT+TGG + chr3_1:73616314-73616333 Msa0374240:CDS 40.0%
ATGCTGACACTAGAGAAGAA+TGG + chr3_1:73616376-73616395 Msa0374240:CDS 40.0%
TTCTCCCAACGAAGCATAAA+TGG - chr3_1:73616559-73616578 None:intergenic 40.0%
TGAGCAAGAAGAGACTGAAT+CGG + chr3_1:73616901-73616920 Msa0374240:intron 40.0%
TTGCGACTGAACACATAGTA+CGG - chr3_1:73617199-73617218 None:intergenic 40.0%
! CTTCTTTTCACCATACCAGT+AGG - chr3_1:73617259-73617278 None:intergenic 40.0%
ACTGGTATGGTGAAAAGAAG+AGG + chr3_1:73617259-73617278 Msa0374240:intron 40.0%
CTGGTATGGTGAAAAGAAGA+GGG + chr3_1:73617260-73617279 Msa0374240:intron 40.0%
TATTGTTCATAGGTACACCG+AGG + chr3_1:73617451-73617470 Msa0374240:intron 40.0%
TGGTACAGATTTCACAAGTG+AGG - chr3_1:73617899-73617918 None:intergenic 40.0%
GAGGTTACAACTGTGATTTG+TGG + chr3_1:73617923-73617942 Msa0374240:CDS 40.0%
AACTGCAACATCAGCTGAAA+GGG - chr3_1:73618128-73618147 None:intergenic 40.0%
TAACTGCAACATCAGCTGAA+AGG - chr3_1:73618129-73618148 None:intergenic 40.0%
! ATGTACACAAGTGGAAGTAC+AGG + chr3_1:73618151-73618170 Msa0374240:CDS 40.0%
AGGAAAGTCAATCCTGTGAA+AGG - chr3_1:73618241-73618260 None:intergenic 40.0%
ATAGTAGCCTAGAGTCTAGA+TGG + chr3_1:73618263-73618282 Msa0374240:intron 40.0%
! CCTATATGCTGAAGTGTTAC+TGG - chr3_1:73618516-73618535 None:intergenic 40.0%
CCAGTAACACTTCAGCATAT+AGG + chr3_1:73618513-73618532 Msa0374240:intron 40.0%
CATGCAAGATAGGAAAACAG+AGG - chr3_1:73618562-73618581 None:intergenic 40.0%
! AATTTGTTTGCTGCTGTTGG+AGG + chr3_1:73618610-73618629 Msa0374240:CDS 40.0%
GGTAAAAAAGGGGACAAAAG+GGG + chr3_1:73618681-73618700 Msa0374240:CDS 40.0%
ATTCTTGATCGTGTTCGTGA+TGG + chr3_1:73618748-73618767 Msa0374240:CDS 40.0%
!! TCGTGATGGAGTTTTCAAGA+AGG + chr3_1:73618762-73618781 Msa0374240:CDS 40.0%
CACATTGGTGCATAATACAC+AGG - chr3_1:73618819-73618838 None:intergenic 40.0%
ATTCACTCACACTCTCACAT+TGG - chr3_1:73618834-73618853 None:intergenic 40.0%
AATTCGTTCTCTGGTCATAC+AGG + chr3_1:73618851-73618870 Msa0374240:intron 40.0%
GGTCATACAGGTAAATGCAA+AGG + chr3_1:73618863-73618882 Msa0374240:intron 40.0%
ATACAGGTAAATGCAAAGGG+AGG + chr3_1:73618867-73618886 Msa0374240:intron 40.0%
TGCAAAGGGAGGATTATCAA+AGG + chr3_1:73618878-73618897 Msa0374240:CDS 40.0%
TTGATTTAGCCTATGCACGA+AGG + chr3_1:73618907-73618926 Msa0374240:CDS 40.0%
CAAAAAGGTCCAAGCAATTC+TGG + chr3_1:73619001-73619020 Msa0374240:CDS 40.0%
TCTTTGTGAGTCACCAGAAA+GGG - chr3_1:73619063-73619082 None:intergenic 40.0%
ATCTTTGTGAGTCACCAGAA+AGG - chr3_1:73619064-73619083 None:intergenic 40.0%
TTACTCCTACTCTTCCCTAA+TGG - chr3_1:73619241-73619260 None:intergenic 40.0%
GAGTAAAACAATGGTCGTGA+AGG + chr3_1:73619255-73619274 Msa0374240:intron 40.0%
TCCAGTAGTATATAAGGTCG+GGG + chr3_1:73619314-73619333 Msa0374240:intron 40.0%
!! ATTTGGTGCTTAACACTCCA+TGG - chr3_1:73619511-73619530 None:intergenic 40.0%
GAAAAACGGGTCAAACTTGA+AGG - chr3_1:73619633-73619652 None:intergenic 40.0%
!! TCAAGTTTGACCCGTTTTTC+CGG + chr3_1:73619633-73619652 Msa0374240:intron 40.0%
AAGGACCAAATCCGGAAAAA+CGG - chr3_1:73619647-73619666 None:intergenic 40.0%
!!! GTGCATGTTTTGAGACTGAA+AGG - chr3_1:73619682-73619701 None:intergenic 40.0%
! AAGTTCTGACTTGCAGTTAC+TGG + chr3_1:73619834-73619853 Msa0374240:intron 40.0%
AAGCTCATGGTCTTTCTTAG+GGG - chr3_1:73619925-73619944 None:intergenic 40.0%
GAAAGCTCATGGTCTTTCTT+AGG - chr3_1:73619927-73619946 None:intergenic 40.0%
CATAGGCAAAATTACACTCG+TGG - chr3_1:73620193-73620212 None:intergenic 40.0%
TGATTCACTGTCTGATTCCA+AGG + chr3_1:73620261-73620280 Msa0374240:intron 40.0%
ACTCGCAAGTTCATCTATCT+TGG - chr3_1:73620329-73620348 None:intergenic 40.0%
!! ATATGTTCAACTGGCCTTGA+TGG + chr3_1:73620393-73620412 Msa0374240:intron 40.0%
ATAGACCGGCAACAAGTATT+GGG - chr3_1:73620480-73620499 None:intergenic 40.0%
AATAGACCGGCAACAAGTAT+TGG - chr3_1:73620481-73620500 None:intergenic 40.0%
! AATACTTGTTGCCGGTCTAT+TGG + chr3_1:73620480-73620499 Msa0374240:intron 40.0%
! TTTTCAGAAGGCCAATAGAC+CGG - chr3_1:73620494-73620513 None:intergenic 40.0%
GTGAAGTTAGTAAGAAGCAG+TGG - chr3_1:73620572-73620591 None:intergenic 40.0%
AGACCATATGCTTGACCTAT+TGG - chr3_1:73620697-73620716 None:intergenic 40.0%
!! ACATATGTGGAAGGTTTTGG+CGG - chr3_1:73620784-73620803 None:intergenic 40.0%
CAGTAATAGATGTCTACTCC+TGG + chr3_1:73621101-73621120 Msa0374240:intron 40.0%
AAATGGGAGGAATATACGGA+AGG + chr3_1:73621799-73621818 Msa0374240:intron 40.0%
GTAGTTGAATATCCACCTTC+AGG - chr3_1:73621945-73621964 None:intergenic 40.0%
CCAATTACTATTTCACCACG+AGG - chr3_1:73621981-73622000 None:intergenic 40.0%
CCTCGTGGTGAAATAGTAAT+TGG + chr3_1:73621978-73621997 Msa0374240:CDS 40.0%
CGTGGTGAAATAGTAATTGG+TGG + chr3_1:73621981-73622000 Msa0374240:CDS 40.0%
AAATACCCAAGAGTGACACT+TGG - chr3_1:73622008-73622027 None:intergenic 40.0%
AAAGACAAGAGAGTCTTGCA+AGG + chr3_1:73622040-73622059 Msa0374240:CDS 40.0%
!! GCTTAAGCTTTTAGGAGAGT+TGG + chr3_1:73622211-73622230 Msa0374240:intron 40.0%
! GAGGCTTTGATATAATGCCA+AGG - chr3_1:73622238-73622257 None:intergenic 40.0%
AACTCCTGACTACTTGGTTA+TGG - chr3_1:73622260-73622279 None:intergenic 40.0%
TTCGTTTCAAAGAACAGAGG+TGG - chr3_1:73622292-73622311 None:intergenic 40.0%
TGACAGTTCTTGACGTAGAT+TGG + chr3_1:73622429-73622448 Msa0374240:intron 40.0%
GGGACACGAATAGTTTATTG+GGG + chr3_1:73622568-73622587 Msa0374240:intron 40.0%
TGACAGTTCTTGACGTAGAT+TGG + chr3_1:73622429-73622448 Msa0374240:intron 40.0%
TCAAGAGGGTCTTACAGATA+GGG - chr3_1:73623019-73623038 None:intergenic 40.0%
! GAAAAGAGTCTTATAGGGAC+AGG + chr3_1:73623180-73623199 Msa0374240:intron 40.0%
GGACAGGAAAAATTGTCAAG+AGG + chr3_1:73623196-73623215 Msa0374240:intron 40.0%
! GTGGAAATAGCTTGTACACA+AGG - chr3_1:73623414-73623433 None:intergenic 40.0%
ACTGAGCCAAAAAAAGTGGA+TGG - chr3_1:73623519-73623538 None:intergenic 40.0%
TGAGACTGAGCCAAAAAAAG+TGG - chr3_1:73623523-73623542 None:intergenic 40.0%
TTATTACGGTCTTCTTGCAC+AGG + chr3_1:73623634-73623653 Msa0374240:intron 40.0%
ATGTTGCATGGATGTAGGTA+TGG + chr3_1:73623695-73623714 Msa0374240:intron 40.0%
ATGGATGTAGGTATGGTATC+AGG + chr3_1:73623702-73623721 Msa0374240:intron 40.0%
!! TGCTGTAAAGGTTGATGAAC+GGG + chr3_1:73624417-73624436 Msa0374240:intron 40.0%
TGACGTAGGTAGATTTCATG+CGG + chr3_1:73624462-73624481 Msa0374240:CDS 40.0%
GTTGCCTTGAGATCATTGAT+AGG + chr3_1:73624488-73624507 Msa0374240:CDS 40.0%
GACATAGTTAAACTGCAGCA+TGG + chr3_1:73624517-73624536 Msa0374240:CDS 40.0%
GGACAACATTATGTTGCATG+CGG + chr3_1:73624663-73624682 Msa0374240:CDS 40.0%
TCATCCTGCATTGGATGAAT+GGG + chr3_1:73624726-73624745 Msa0374240:CDS 40.0%
CAGCAAAGAAGAAACAGTGA+AGG + chr3_1:73624792-73624811 Msa0374240:CDS 40.0%
CAAAGAAGAAACAGTGAAGG+AGG + chr3_1:73624795-73624814 Msa0374240:CDS 40.0%
TTGACTGTTAGAAAATGGGG+AGG + chr3_1:73625024-73625043 Msa0374240:intron 40.0%
GGAATACATGAAATAGGGAG+AGG - chr3_1:73625220-73625239 None:intergenic 40.0%
CAAATTCATAACGTACCTGG+AGG + chr3_1:73625284-73625303 Msa0374240:intron 40.0%
TCTTAAGAGCTGCAGTAACT+AGG - chr3_1:73625559-73625578 None:intergenic 40.0%
AGACAAAACCAAACTCGGAA+TGG + chr3_1:73625639-73625658 Msa0374240:exon 40.0%
ATGAGTAACCATTCCGAGTT+TGG - chr3_1:73625650-73625669 None:intergenic 40.0%
AAGAAGTAGCTCCTTTCACT+GGG - chr3_1:73625673-73625692 None:intergenic 40.0%
AAAGAAGTAGCTCCTTTCAC+TGG - chr3_1:73625674-73625693 None:intergenic 40.0%
AAAATACATAACCGTCCCAG+AGG - chr3_1:73625705-73625724 None:intergenic 40.0%
ACAATGAACGCCTACATTGC+CGG + chr3_1:73615967-73615986 Msa0374240:exon 45.0%
AAGTTAACGGAGATGTGACG+CGG - chr3_1:73616101-73616120 None:intergenic 45.0%
CATCTCCGTTAACTTCACTC+TGG + chr3_1:73616106-73616125 Msa0374240:CDS 45.0%
CCTTCCCAGAGTGAAGTTAA+CGG - chr3_1:73616114-73616133 None:intergenic 45.0%
!! TCAATGGGTTACGTATGGGA+AGG + chr3_1:73616278-73616297 Msa0374240:CDS 45.0%
! TGTTTGTTCAGGCTTGCTTC+CGG + chr3_1:73616514-73616533 Msa0374240:intron 45.0%
TGCGACTGAACACATAGTAC+GGG - chr3_1:73617198-73617217 None:intergenic 45.0%
TGATCGGCACAAATCTCTTG+AGG + chr3_1:73617376-73617395 Msa0374240:intron 45.0%
GATCGGCACAAATCTCTTGA+GGG + chr3_1:73617377-73617396 Msa0374240:intron 45.0%
! GATGATGACAACAAGAGCAC+AGG - chr3_1:73617842-73617861 None:intergenic 45.0%
GTGAAATCTGTACCAGACAG+AGG + chr3_1:73617904-73617923 Msa0374240:intron 45.0%
TCACAGTTGTAACCTCTGTC+TGG - chr3_1:73617919-73617938 None:intergenic 45.0%
TGGTAGAGAAAACCCTATCG+AGG + chr3_1:73618093-73618112 Msa0374240:CDS 45.0%
ACTGCAACATCAGCTGAAAG+GGG - chr3_1:73618127-73618146 None:intergenic 45.0%
CACACTACCATCTAGACTCT+AGG - chr3_1:73618273-73618292 None:intergenic 45.0%
TGTTCCTGAACTTGGGACAA+AGG + chr3_1:73618427-73618446 Msa0374240:CDS 45.0%
ACATCCTTTGTCCCAAGTTC+AGG - chr3_1:73618434-73618453 None:intergenic 45.0%
GTTGGAGGCTGTATAGGATA+CGG + chr3_1:73618625-73618644 Msa0374240:CDS 45.0%
! TGCATTGATGCCAACTGTGT+TGG + chr3_1:73618711-73618730 Msa0374240:CDS 45.0%
CGAACACGATCAAGAATTGC+TGG - chr3_1:73618745-73618764 None:intergenic 45.0%
GTGTGAGTGAATTCGTTCTC+TGG + chr3_1:73618842-73618861 Msa0374240:intron 45.0%
CGAAGGATGCAAGCGATTAA+TGG + chr3_1:73618924-73618943 Msa0374240:CDS 45.0%
TGCAAGCGATTAATGGTAGC+TGG + chr3_1:73618931-73618950 Msa0374240:CDS 45.0%
GCGATTAATGGTAGCTGGTT+TGG + chr3_1:73618936-73618955 Msa0374240:CDS 45.0%
GGGGATTGGAAAAAGCTCTA+TGG + chr3_1:73618964-73618983 Msa0374240:CDS 45.0%
CTTTGTGAGTCACCAGAAAG+GGG - chr3_1:73619062-73619081 None:intergenic 45.0%
CCAGTAGTATATAAGGTCGG+GGG + chr3_1:73619315-73619334 Msa0374240:intron 45.0%
TTTCTCATGTCACGCGCATT+TGG - chr3_1:73619528-73619547 None:intergenic 45.0%
GGTCAAACTTGAAGGACATC+AGG - chr3_1:73619625-73619644 None:intergenic 45.0%
!! TTGACCCGTTTTTCCGGATT+TGG + chr3_1:73619639-73619658 Msa0374240:intron 45.0%
AGGACCAAATCCGGAAAAAC+GGG - chr3_1:73619646-73619665 None:intergenic 45.0%
CTTGCAGTTACTGGAAGCAA+AGG + chr3_1:73619843-73619862 Msa0374240:intron 45.0%
! TCAACCCCAATACTTGTTGC+CGG + chr3_1:73620472-73620491 Msa0374240:intron 45.0%
! TAGACCGGCAACAAGTATTG+GGG - chr3_1:73620479-73620498 None:intergenic 45.0%
!! GTCGTTTTCAGTGCTCCAAT+AGG + chr3_1:73620679-73620698 Msa0374240:intron 45.0%
GCTCCAATAGGTCAAGCATA+TGG + chr3_1:73620691-73620710 Msa0374240:CDS 45.0%
AGGTCAAGCATATGGTCTCA+CGG + chr3_1:73620699-73620718 Msa0374240:CDS 45.0%
TCATGTCATGCCCAACTTCT+TGG + chr3_1:73621582-73621601 Msa0374240:intron 45.0%
TCATCAGGACTTTGTGCATG+TGG + chr3_1:73621614-73621633 Msa0374240:intron 45.0%
ACTATTTCACCACGAGGCAT+CGG - chr3_1:73621975-73621994 None:intergenic 45.0%
!! CTTTTAGGAGAGTTGGTCCT+TGG + chr3_1:73622218-73622237 Msa0374240:intron 45.0%
TCCTGACTACTTGGTTATGG+AGG - chr3_1:73622257-73622276 None:intergenic 45.0%
GGAGAAAACTCCTGACTACT+TGG - chr3_1:73622266-73622285 None:intergenic 45.0%
TTCAAAGAACAGAGGTGGTG+AGG - chr3_1:73622287-73622306 None:intergenic 45.0%
GTCCCGGTAAGATTCATGAA+TGG - chr3_1:73622381-73622400 None:intergenic 45.0%
TTCATGAATCTTACCGGGAC+AGG + chr3_1:73622381-73622400 Msa0374240:intron 45.0%
GTCAAGAGGGTCTTACAGAT+AGG - chr3_1:73623020-73623039 None:intergenic 45.0%
CAATTGCGCTTTGGTCAAGA+GGG - chr3_1:73623033-73623052 None:intergenic 45.0%
ACAATTGCGCTTTGGTCAAG+AGG - chr3_1:73623034-73623053 None:intergenic 45.0%
! GGTTTTACATATAGGGACCG+AGG + chr3_1:73623218-73623237 Msa0374240:intron 45.0%
TCACCCTAGATGAGTATCCT+AGG + chr3_1:73623301-73623320 Msa0374240:intron 45.0%
ATGCAGTGAACAGAGCATAG+TGG - chr3_1:73623546-73623565 None:intergenic 45.0%
GTAGGTATGGTATCAGGAAC+TGG + chr3_1:73623708-73623727 Msa0374240:intron 45.0%
ATTGTCATACCAGTACCACC+CGG - chr3_1:73623947-73623966 None:intergenic 45.0%
TTACACTACCAAGGGGAGTT+TGG + chr3_1:73624302-73624321 Msa0374240:intron 45.0%
!! GCTGTAAAGGTTGATGAACG+GGG + chr3_1:73624418-73624437 Msa0374240:intron 45.0%
GTAGGTAGATTTCATGCGGA+TGG + chr3_1:73624466-73624485 Msa0374240:CDS 45.0%
CATGGAGAATATGTGTCCCT+GGG + chr3_1:73624535-73624554 Msa0374240:CDS 45.0%
AGAATATGTGTCCCTGGGAA+AGG + chr3_1:73624540-73624559 Msa0374240:CDS 45.0%
AAGTTACTGTGTGGCACTTG+TGG + chr3_1:73624696-73624715 Msa0374240:CDS 45.0%
CTCATCCTGCATTGGATGAA+TGG + chr3_1:73624725-73624744 Msa0374240:CDS 45.0%
! GATGAATGGGCTTCAAAGCA+AGG + chr3_1:73624739-73624758 Msa0374240:CDS 45.0%
GGTGCATGCATCACTTGTAA+AGG + chr3_1:73624816-73624835 Msa0374240:CDS 45.0%
ATTCATAACGTACCTGGAGG+TGG + chr3_1:73625287-73625306 Msa0374240:intron 45.0%
TGGTTACTCATCCCAGTGAA+AGG + chr3_1:73625659-73625678 Msa0374240:three_prime_UTR 45.0%
GGTAATCTACTCAACTAGGG+TGG - chr3_1:73625741-73625760 None:intergenic 45.0%
!! TATACATAAAATATATAATT+AGG - chr3_1:73616763-73616782 None:intergenic 5.0%
!! ATTTAAAAAGATAATATATT+AGG - chr3_1:73621681-73621700 None:intergenic 5.0%
!!! TAATATATTATCTTTTTAAA+TGG + chr3_1:73621680-73621699 Msa0374240:intron 5.0%
GCAATGTAGAAAGAGTGGGG+CGG - chr3_1:73615856-73615875 None:intergenic 50.0%
GTTTGCGGTTGTTGGAGTTG+CGG - chr3_1:73616023-73616042 None:intergenic 50.0%
! CCGTTAACTTCACTCTGGGA+AGG + chr3_1:73616111-73616130 Msa0374240:CDS 50.0%
!! GCTTCTGGTTTGGCGAAGAT+TGG + chr3_1:73616324-73616343 Msa0374240:CDS 50.0%
CACATAGTACGGGTGCGATA+CGG - chr3_1:73617188-73617207 None:intergenic 50.0%
GGGGTAAATCAGCCTCGATA+GGG - chr3_1:73618108-73618127 None:intergenic 50.0%
AGGGGTAAATCAGCCTCGAT+AGG - chr3_1:73618109-73618128 None:intergenic 50.0%
! TGGAAGTACAGGCTTGCCTA+AGG + chr3_1:73618162-73618181 Msa0374240:CDS 50.0%
! CAGGGTGTGATGATGACACA+TGG + chr3_1:73618368-73618387 Msa0374240:intron 50.0%
CACAGTTGGCATCAATGCAG+TGG - chr3_1:73618710-73618729 None:intergenic 50.0%
GGTACAGCTACCAACACAGT+TGG - chr3_1:73618724-73618743 None:intergenic 50.0%
!! ATGGTAGCTGGTTTGGTGCT+TGG + chr3_1:73618943-73618962 Msa0374240:CDS 50.0%
!! TGGTAGCTGGTTTGGTGCTT+GGG + chr3_1:73618944-73618963 Msa0374240:CDS 50.0%
AAGGTCCAAGCAATTCTGGG+TGG + chr3_1:73619005-73619024 Msa0374240:CDS 50.0%
TACGACCACCCAGAATTGCT+TGG - chr3_1:73619013-73619032 None:intergenic 50.0%
CCCCCGACCTTATATACTAC+TGG - chr3_1:73619318-73619337 None:intergenic 50.0%
GCAGTAGCCTTCTCAACTCA+TGG - chr3_1:73619417-73619436 None:intergenic 50.0%
GTCTCAAAACATGCACGTCG+TGG + chr3_1:73619686-73619705 Msa0374240:intron 50.0%
CACAGTGCGGCAAAAAAGTG+TGG - chr3_1:73619949-73619968 None:intergenic 50.0%
!! TCAGGACTGGTCTCTGCTAA+AGG + chr3_1:73620533-73620552 Msa0374240:intron 50.0%
GATACTTCTGTTGGCCGTGT+AGG + chr3_1:73620757-73620776 Msa0374240:CDS 50.0%
!! AAGGTTTTGGCGGTCCTACA+CGG - chr3_1:73620774-73620793 None:intergenic 50.0%
TTGCTTTGTGGCCCTTCTCA+TGG - chr3_1:73621484-73621503 None:intergenic 50.0%
GAGAAGGGCCACAAAGCAAT+TGG + chr3_1:73621485-73621504 Msa0374240:intron 50.0%
!! CAGTTAATCGACTGGCCTGA+AGG + chr3_1:73621927-73621946 Msa0374240:intron 50.0%
!! TTAATCGACTGGCCTGAAGG+TGG + chr3_1:73621930-73621949 Msa0374240:CDS 50.0%
! GTGGTCCAAGTGTCACTCTT+GGG + chr3_1:73622000-73622019 Msa0374240:CDS 50.0%
GCCTCCATAACCAAGTAGTC+AGG + chr3_1:73622253-73622272 Msa0374240:intron 50.0%
GGTCTTACAGATAGGGAAGG+AGG - chr3_1:73623012-73623031 None:intergenic 50.0%
GAGGGTCTTACAGATAGGGA+AGG - chr3_1:73623015-73623034 None:intergenic 50.0%
!! AGGTTGATGAACGGGGAATG+AGG + chr3_1:73624425-73624444 Msa0374240:intron 50.0%
TTGATGAACGGGGAATGAGG+TGG + chr3_1:73624428-73624447 Msa0374240:CDS 50.0%
! GGAATGAGGTGGTTCTACAC+TGG + chr3_1:73624439-73624458 Msa0374240:CDS 50.0%
! TGGTTCTACACTGGTGACGT+AGG + chr3_1:73624448-73624467 Msa0374240:CDS 50.0%
GCATGGAGAATATGTGTCCC+TGG + chr3_1:73624534-73624553 Msa0374240:CDS 50.0%
GTGCATGCATACCTTTCCCA+GGG - chr3_1:73624554-73624573 None:intergenic 50.0%
! GGAAAGGTATGCATGCACGT+TGG + chr3_1:73624556-73624575 Msa0374240:intron 50.0%
! CAGGTTGAGGCAGTTCTTCT+TGG + chr3_1:73624628-73624647 Msa0374240:intron 50.0%
!! GGCTGTTTCTCATCCTGCAT+TGG + chr3_1:73624717-73624736 Msa0374240:CDS 50.0%
GAAGCCCATTCATCCAATGC+AGG - chr3_1:73624733-73624752 None:intergenic 50.0%
AACGATGAGGCCGGCAATGT+AGG - chr3_1:73615980-73615999 None:intergenic 55.0%
GGATGACGAGAGGAACGATG+AGG - chr3_1:73615993-73616012 None:intergenic 55.0%
TGTTGGAGTTGCGGAAGAGG+AGG - chr3_1:73616014-73616033 None:intergenic 55.0%
GGTTGTTGGAGTTGCGGAAG+AGG - chr3_1:73616017-73616036 None:intergenic 55.0%
TTAACGGAGATGTGACGCGG+TGG - chr3_1:73616098-73616117 None:intergenic 55.0%
GTGGAGATGTAAGCGGGTGA+TGG + chr3_1:73616875-73616894 Msa0374240:intron 55.0%
GAGCAGATGCGGCATCAGAT+GGG - chr3_1:73618030-73618049 None:intergenic 55.0%
TGAGCAGATGCGGCATCAGA+TGG - chr3_1:73618031-73618050 None:intergenic 55.0%
CCATCCATGCTGAGCAGATG+CGG - chr3_1:73618041-73618060 None:intergenic 55.0%
GCTGCTGTTGGAGGCTGTAT+AGG + chr3_1:73618619-73618638 Msa0374240:CDS 55.0%
CGCTTGCATCCTTCGTGCAT+AGG - chr3_1:73618919-73618938 None:intergenic 55.0%
!! GGTAGCTGGTTTGGTGCTTG+GGG + chr3_1:73618945-73618964 Msa0374240:CDS 55.0%
!! CTGGTTTGGTGCTTGGGGAT+TGG + chr3_1:73618950-73618969 Msa0374240:CDS 55.0%
! TCACGGAGACTTGTGCTGGT+GGG + chr3_1:73620716-73620735 Msa0374240:CDS 55.0%
! GGTGGTCCAAGTGTCACTCT+TGG + chr3_1:73621999-73622018 Msa0374240:CDS 55.0%
! AGTGAAGTGTCCACGAGCAC+CGG + chr3_1:73623925-73623944 Msa0374240:intron 55.0%
! TGGCTCTACCAAACTCCCCT+TGG - chr3_1:73624313-73624332 None:intergenic 55.0%
CGTGCATGCATACCTTTCCC+AGG - chr3_1:73624555-73624574 None:intergenic 55.0%
TCTTCTTGGCAGCCCCTTTG+TGG + chr3_1:73624642-73624661 Msa0374240:CDS 55.0%
AACGTACCTGGAGGTGGAGT+AGG + chr3_1:73625293-73625312 Msa0374240:intron 55.0%
ACGTACCTGGAGGTGGAGTA+GGG + chr3_1:73625294-73625313 Msa0374240:intron 55.0%
TACTTCCCTACTCCACCTCC+AGG - chr3_1:73625302-73625321 None:intergenic 55.0%
GGAAGCAAAGAAGGCTCGTC+TGG + chr3_1:73625472-73625491 Msa0374240:intron 55.0%
GCAGTAACTAGGCCAGTCTC+AGG - chr3_1:73625548-73625567 None:intergenic 55.0%
GACGAGAGGAACGATGAGGC+CGG - chr3_1:73615989-73616008 None:intergenic 60.0%
CGGAAGAGGAGGATGACGAG+AGG - chr3_1:73616003-73616022 None:intergenic 60.0%
TCCAACAACCGCAAACGCCG+CGG + chr3_1:73616027-73616046 Msa0374240:CDS 60.0%
GAGATGTGACGCGGTGGTTG+CGG - chr3_1:73616092-73616111 None:intergenic 60.0%
GATGCCGCATCTGCTCAGCA+TGG + chr3_1:73618034-73618053 Msa0374240:CDS 60.0%
CCGCATCTGCTCAGCATGGA+TGG + chr3_1:73618038-73618057 Msa0374240:CDS 60.0%
! TGTGGTGGTGCACCCCTTTC+TGG + chr3_1:73619047-73619066 Msa0374240:CDS 60.0%
GGTCTCACGGAGACTTGTGC+TGG + chr3_1:73620712-73620731 Msa0374240:CDS 60.0%
CTCACGGAGACTTGTGCTGG+TGG + chr3_1:73620715-73620734 Msa0374240:CDS 60.0%
! ACTGACTCACCGATGCCTCG+TGG + chr3_1:73621963-73621982 Msa0374240:CDS 60.0%
! GTGAAGTGTCCACGAGCACC+GGG + chr3_1:73623926-73623945 Msa0374240:intron 60.0%
GACCCATGGACTCCTGAGAC+TGG + chr3_1:73625533-73625552 Msa0374240:CDS 60.0%
GGCCAGTCTCAGGAGTCCAT+GGG - chr3_1:73625538-73625557 None:intergenic 60.0%
AGGCCAGTCTCAGGAGTCCA+TGG - chr3_1:73625539-73625558 None:intergenic 60.0%
TGGTTGCGGACCGCGAAACC+AGG - chr3_1:73616078-73616097 None:intergenic 65.0%
! GGAAGGCGTGACGACACTCG+CGG + chr3_1:73616128-73616147 Msa0374240:CDS 65.0%
!! AAGTGTCCACGAGCACCGGG+TGG + chr3_1:73623929-73623948 Msa0374240:intron 65.0%
GCCGCGGCGTTTGCGGTTGT+TGG - chr3_1:73616031-73616050 None:intergenic 70.0%
CCGGTAAGCCGCGGCGTTTG+CGG - chr3_1:73616038-73616057 None:intergenic 70.0%
CCGCAAACGCCGCGGCTTAC+CGG + chr3_1:73616035-73616054 Msa0374240:CDS 70.0%
ACCAGGTTCGCCGCCGACGT+CGG - chr3_1:73616061-73616080 None:intergenic 70.0%
CGGCGGCGAACCTGGTTTCG+CGG + chr3_1:73616065-73616084 Msa0374240:CDS 70.0%
CCAGTACCACCCGGTGCTCG+TGG - chr3_1:73623938-73623957 None:intergenic 70.0%
!! CCACGAGCACCGGGTGGTAC+TGG + chr3_1:73623935-73623954 Msa0374240:intron 70.0%
CGACGTCGGCCGGTAAGCCG+CGG - chr3_1:73616047-73616066 None:intergenic 75.0%
CGCGGCTTACCGGCCGACGT+CGG + chr3_1:73616045-73616064 Msa0374240:CDS 75.0%
GGCTTACCGGCCGACGTCGG+CGG + chr3_1:73616048-73616067 Msa0374240:CDS 75.0%
! GGTTCGCCGCCGACGTCGGC+CGG - chr3_1:73616057-73616076 None:intergenic 80.0%
! GCCGACGTCGGCGGCGAACC+TGG + chr3_1:73616057-73616076 Msa0374240:CDS 80.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 73615739 73625848 73615739 ID=Msa0374240;Name=Msa0374240
chr3_1 mRNA 73615739 73625848 73615739 ID=Msa0374240-mRNA-1;Parent=Msa0374240;Name=Msa0374240-mRNA-1;_AED=0.06;_eAED=0.06;_QI=231|1|1|1|1|1|11|208|694
chr3_1 exon 73615739 73616413 73615739 ID=Msa0374240-mRNA-1:exon:16760;Parent=Msa0374240-mRNA-1
chr3_1 exon 73616525 73616605 73616525 ID=Msa0374240-mRNA-1:exon:16761;Parent=Msa0374240-mRNA-1
chr3_1 exon 73617920 73618183 73617920 ID=Msa0374240-mRNA-1:exon:16762;Parent=Msa0374240-mRNA-1
chr3_1 exon 73618371 73618502 73618371 ID=Msa0374240-mRNA-1:exon:16763;Parent=Msa0374240-mRNA-1
chr3_1 exon 73618610 73618783 73618610 ID=Msa0374240-mRNA-1:exon:16764;Parent=Msa0374240-mRNA-1
chr3_1 exon 73618873 73619102 73618873 ID=Msa0374240-mRNA-1:exon:16765;Parent=Msa0374240-mRNA-1
chr3_1 exon 73620690 73620807 73620690 ID=Msa0374240-mRNA-1:exon:16766;Parent=Msa0374240-mRNA-1
chr3_1 exon 73621930 73622061 73621930 ID=Msa0374240-mRNA-1:exon:16767;Parent=Msa0374240-mRNA-1
chr3_1 exon 73624427 73624561 73624427 ID=Msa0374240-mRNA-1:exon:16768;Parent=Msa0374240-mRNA-1
chr3_1 exon 73624631 73624837 73624631 ID=Msa0374240-mRNA-1:exon:16769;Parent=Msa0374240-mRNA-1
chr3_1 exon 73625473 73625848 73625473 ID=Msa0374240-mRNA-1:exon:16770;Parent=Msa0374240-mRNA-1
chr3_1 five_prime_UTR 73615739 73615969 73615739 ID=Msa0374240-mRNA-1:five_prime_utr;Parent=Msa0374240-mRNA-1
chr3_1 CDS 73615970 73616413 73615970 ID=Msa0374240-mRNA-1:cds;Parent=Msa0374240-mRNA-1
chr3_1 CDS 73616525 73616605 73616525 ID=Msa0374240-mRNA-1:cds;Parent=Msa0374240-mRNA-1
chr3_1 CDS 73617920 73618183 73617920 ID=Msa0374240-mRNA-1:cds;Parent=Msa0374240-mRNA-1
chr3_1 CDS 73618371 73618502 73618371 ID=Msa0374240-mRNA-1:cds;Parent=Msa0374240-mRNA-1
chr3_1 CDS 73618610 73618783 73618610 ID=Msa0374240-mRNA-1:cds;Parent=Msa0374240-mRNA-1
chr3_1 CDS 73618873 73619102 73618873 ID=Msa0374240-mRNA-1:cds;Parent=Msa0374240-mRNA-1
chr3_1 CDS 73620690 73620807 73620690 ID=Msa0374240-mRNA-1:cds;Parent=Msa0374240-mRNA-1
chr3_1 CDS 73621930 73622061 73621930 ID=Msa0374240-mRNA-1:cds;Parent=Msa0374240-mRNA-1
chr3_1 CDS 73624427 73624561 73624427 ID=Msa0374240-mRNA-1:cds;Parent=Msa0374240-mRNA-1
chr3_1 CDS 73624631 73624837 73624631 ID=Msa0374240-mRNA-1:cds;Parent=Msa0374240-mRNA-1
chr3_1 CDS 73625473 73625640 73625473 ID=Msa0374240-mRNA-1:cds;Parent=Msa0374240-mRNA-1
chr3_1 three_prime_UTR 73625641 73625848 73625641 ID=Msa0374240-mRNA-1:three_prime_utr;Parent=Msa0374240-mRNA-1
Gene Sequence

>Msa0374240

ATGAACGCCTACATTGCCGGCCTCATCGTTCCTCTCGTCATCCTCCTCTTCCGCAACTCCAACAACCGCAAACGCCGCGGCTTACCGGCCGACGTCGGCGGCGAACCTGGTTTCGCGGTCCGCAACCACCGCGTCACATCTCCGTTAACTTCACTCTGGGAAGGCGTGACGACACTCGCGGAGCTTTTCGAGCTAACATGCAACAAGAATCATGATAGATTGTTACTCGGAACTCGTGAATTGATCTCACGTGAAATGGAAACTTCTTCTGATGGAAGAAAGTTCGAGAAGCTTCATCTTGGAGAGTATCAATGGGTTACGTATGGGAAGGTTTTTGTATCTGTTTGCAGTTTTGCTTCTGGTTTGGCGAAGATTGGTCATGTTAGAGAAGAACGTGTTGCGATTTATGCTGACACTAGAGAAGAATGGTTTATTGCATTGCAGGCTTGCTTCCGGAGAAATGTGACTGTTGTTACCATTTATGCTTCGTTGGGAGAAGAAGCTTTGTGCCATTCATTGAATGAGACAGAGGTTACAACTGTGATTTGTGGCCGCAAAGAATTGAAATCACTTGTAAATATTGCTGGACAACTTGACACTGTGAAACGTGTGATATGTATTGAAGATGATGTCCCATCTGATGCCGCATCTGCTCAGCATGGATGGACAATCATTTCCTTTTCTGATGTTGAAAGGCTTGGTAGAGAAAACCCTATCGAGGCTGATTTACCCCTTTCAGCTGATGTTGCAGTTATAATGTACACAAGTGGAAGTACAGGCTTGCCTAAGGGTGTGATGATGACACATGGCAATATCTTAGCAACAGTGTCTGCTGTAGTGAAAATTGTTCCTGAACTTGGGACAAAGGATGTATATCTAGCATACTTACCAATGGCTCATATTCTTGAATTAATAGCTGAGAATTTGTTTGCTGCTGTTGGAGGCTGTATAGGATACGGAACTCCATTAACTCTAACCGATACATCAAACAAGGTAAAAAAGGGGACAAAAGGGGATGCCACTGCATTGATGCCAACTGTGTTGGTAGCTGTACCAGCAATTCTTGATCGTGTTCGTGATGGAGTTTTCAAGAAGGTAAATGCAAAGGGAGGATTATCAAAGGCATTGTTTGATTTAGCCTATGCACGAAGGATGCAAGCGATTAATGGTAGCTGGTTTGGTGCTTGGGGATTGGAAAAAGCTCTATGGAATTTTCTTGTCTTCAAAAAGGTCCAAGCAATTCTGGGTGGTCGTATTCGTTTTATACTATGTGGTGGTGCACCCCTTTCTGGTGACTCACAAAGATTCATCAACATTTGTCTTGGTGCTCCAATAGGTCAAGCATATGGTCTCACGGAGACTTGTGCTGGTGGGACATTTTCTGATTTTGACGATACTTCTGTTGGCCGTGTAGGACCGCCAAAACCTTCCACATATGTTAAGTTAATCGACTGGCCTGAAGGTGGATATTCAACTACTGACTCACCGATGCCTCGTGGTGAAATAGTAATTGGTGGTCCAAGTGTCACTCTTGGGTATTTCAAAAATGAAGAAAAGACAAGAGAGTCTTGCAAGGTTGATGAACGGGGAATGAGGTGGTTCTACACTGGTGACGTAGGTAGATTTCATGCGGATGGTTGCCTTGAGATCATTGATAGGAAAAAGGACATAGTTAAACTGCAGCATGGAGAATATGTGTCCCTGGGAAAGGTTGAGGCAGTTCTTCTTGGCAGCCCCTTTGTGGACAACATTATGTTGCATGCGGATTCTTTTCAAAGTTACTGTGTGGCACTTGTGGCTGTTTCTCATCCTGCATTGGATGAATGGGCTTCAAAGCAAGGAATTGCTTATTCTGATCTTTCAGAACTGTGCAGCAAAGAAGAAACAGTGAAGGAGGTGCATGCATCACTTGTAAAGGAAGCAAAGAAGGCTCGTCTGGAAAAATTTGAAATTCCTGCAAAACTTAAATTGCTTTCTGACCCATGGACTCCTGAGACTGGCCTAGTTACTGCAGCTCTTAAGATCAAGAGAGATGTCATTAGAAAGACTTTTCAAGAAGAGCTCTCAAAGTTATATGCCAAATAG
Protein sequence

>Msa0374240

MNAYIAGLIVPLVILLFRNSNNRKRRGLPADVGGEPGFAVRNHRVTSPLTSLWEGVTTLAELFELTCNKNHDRLLLGTRELISREMETSSDGRKFEKLHLGEYQWVTYGKVFVSVCSFASGLAKIGHVREERVAIYADTREEWFIALQACFRRNVTVVTIYASLGEEALCHSLNETEVTTVICGRKELKSLVNIAGQLDTVKRVICIEDDVPSDAASAQHGWTIISFSDVERLGRENPIEADLPLSADVAVIMYTSGSTGLPKGVMMTHGNILATVSAVVKIVPELGTKDVYLAYLPMAHILELIAENLFAAVGGCIGYGTPLTLTDTSNKVKKGTKGDATALMPTVLVAVPAILDRVRDGVFKKVNAKGGLSKALFDLAYARRMQAINGSWFGAWGLEKALWNFLVFKKVQAILGGRIRFILCGGAPLSGDSQRFINICLGAPIGQAYGLTETCAGGTFSDFDDTSVGRVGPPKPSTYVKLIDWPEGGYSTTDSPMPRGEIVIGGPSVTLGYFKNEEKTRESCKVDERGMRWFYTGDVGRFHADGCLEIIDRKKDIVKLQHGEYVSLGKVEAVLLGSPFVDNIMLHADSFQSYCVALVAVSHPALDEWASKQGIAYSDLSELCSKEETVKEVHASLVKEAKKARLEKFEIPAKLKLLSDPWTPETGLVTAALKIKRDVIRKTFQEELSKLYAK*