Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575690 | XP_003631094.1 | 86.197 | 710 | 38 | 11 | 1 | 693 | 1 | 667 | 0.0 | 1078 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575690 | sp|B0F9L7|GOGC2_ARATH | 45.014 | 722 | 313 | 13 | 1 | 693 | 1 | 667 | 4.85e-160 | 479 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575690 | G7LDC1 | 86.197 | 710 | 38 | 11 | 1 | 693 | 1 | 667 | 0.0 | 1078 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0223770 | Msa0575690 | 0.809343 | 1.982771e-50 | -8.615850e-47 |
| Msa0573670 | Msa0575690 | 0.810427 | 1.159010e-50 | -8.615850e-47 |
| Msa0574850 | Msa0575690 | 0.824189 | 9.238033e-54 | -8.615850e-47 |
| Msa0575060 | Msa0575690 | 0.823069 | 1.689092e-53 | -8.615850e-47 |
| Msa0575270 | Msa0575690 | 0.839075 | 1.967942e-57 | -8.615850e-47 |
| Msa0575330 | Msa0575690 | 0.802161 | 6.398047e-49 | -8.615850e-47 |
| Msa0575690 | Msa0633060 | 0.805706 | 1.172692e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575690 | MtrunA17_Chr8g0392921 | 86.197 | 710 | 38 | 11 | 1 | 693 | 1 | 667 | 0.0 | 1078 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575690 | AT1G18190.1 | 45.014 | 722 | 313 | 13 | 1 | 693 | 1 | 667 | 4.93e-161 | 479 |
| Msa0575690 | AT2G19950.1 | 25.731 | 342 | 216 | 11 | 334 | 667 | 374 | 685 | 9.02e-13 | 72.0 |
| Msa0575690 | AT2G19950.2 | 25.429 | 350 | 207 | 11 | 334 | 667 | 377 | 688 | 9.61e-13 | 72.0 |
Find 188 sgRNAs with CRISPR-Local
Find 553 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCATTATTATATATTTC+TGG | 0.162311 | 4_1:+79594259 | None:intergenic |
| TTCTTTCTCTCCCTCTAATT+TGG | 0.162742 | 4_1:+79600395 | None:intergenic |
| GGTAGGAGGGTTAGATGATT+TGG | 0.215534 | 4_1:+79601127 | None:intergenic |
| AGTAATTCTGGTGAATTTAA+TGG | 0.240169 | 4_1:+79600753 | None:intergenic |
| CAGAGGTTAGACTCTCTTAA+AGG | 0.251513 | 4_1:-79600942 | Msa0575690:CDS |
| CAACTGAAAACTGTGATAAA+AGG | 0.253903 | 4_1:-79600648 | Msa0575690:CDS |
| TTTCTTTCTTTCTGTTAGTT+AGG | 0.261686 | 4_1:+79601588 | None:intergenic |
| TTTCTTGCCAGAGTGAATTC+TGG | 0.261809 | 4_1:+79594628 | None:intergenic |
| TGATAAAGTTGCACAATTAC+AGG | 0.276409 | 4_1:-79596938 | Msa0575690:CDS |
| TCTTACACGTTTAGCTAAAC+TGG | 0.279886 | 4_1:-79599915 | Msa0575690:CDS |
| TTATTATATATTTCTGGTTA+TGG | 0.280911 | 4_1:+79594265 | None:intergenic |
| CGTGAAGCTCCAGTTTGATT+AGG | 0.306354 | 4_1:+79597256 | None:intergenic |
| TCCTCTTCCAGCAGTAATTC+TGG | 0.307191 | 4_1:+79600741 | None:intergenic |
| ACACCACCGGCACCTGGTTT+GGG | 0.315300 | 4_1:+79601269 | None:intergenic |
| GACACCACCGGCACCTGGTT+TGG | 0.320602 | 4_1:+79601268 | None:intergenic |
| TTTGAAAAGGGGTTCTTCTA+TGG | 0.327602 | 4_1:-79600580 | Msa0575690:CDS |
| ATACCTCAATTCGAAATATA+AGG | 0.334475 | 4_1:+79594876 | None:intergenic |
| GTAGGAGGGTTAGATGATTT+GGG | 0.334545 | 4_1:+79601128 | None:intergenic |
| GCAGGCAGTGTCGAGGTTGC+TGG | 0.336792 | 4_1:-79594765 | Msa0575690:intron |
| GATAATAGAATAGAATTAGA+AGG | 0.347062 | 4_1:+79601538 | None:intergenic |
| CACATCACAGGCAAGGAAAC+TGG | 0.347156 | 4_1:-79595342 | Msa0575690:intron |
| ACTGATAACAATGATTATAA+TGG | 0.347618 | 4_1:-79601197 | Msa0575690:CDS |
| CCTTGTTTGCCTTCATTTGT+GGG | 0.349044 | 4_1:-79594507 | Msa0575690:CDS |
| ACGTGTAAGAATTTCCATTC+TGG | 0.361453 | 4_1:+79599928 | None:intergenic |
| CAAATCATTAGATGTTGAAT+TGG | 0.365479 | 4_1:+79600599 | None:intergenic |
| GTTCTCGGCGGCTTTAAGTT+TGG | 0.370618 | 4_1:+79601481 | None:intergenic |
| CAAATCAAACCATGGCGAAT+TGG | 0.373004 | 4_1:-79601511 | Msa0575690:exon |
| GTAATTCTGGTGAATTTAAT+GGG | 0.379706 | 4_1:+79600754 | None:intergenic |
| CAACATCTAATGATTTGAAA+AGG | 0.394443 | 4_1:-79600593 | Msa0575690:CDS |
| AACATCTAATGATTTGAAAA+GGG | 0.404734 | 4_1:-79600592 | Msa0575690:CDS |
| CAACGAGAGGCTTCAATTAG+AGG | 0.405870 | 4_1:-79601318 | Msa0575690:CDS |
| GGTGGATTTAGCATCAGTTT+CGG | 0.410217 | 4_1:+79600851 | None:intergenic |
| AAAGGAGAAAGAAGAGAGAA+AGG | 0.412621 | 4_1:-79600482 | Msa0575690:CDS |
| ACCTTGTTTGCCTTCATTTG+TGG | 0.413395 | 4_1:-79594508 | Msa0575690:CDS |
| TCATCAAGTGACTTAGAATC+TGG | 0.414826 | 4_1:-79594695 | Msa0575690:CDS |
| AGTTGACTGCCAACATCTAC+AGG | 0.415643 | 4_1:+79600666 | None:intergenic |
| GTGAACATGAGAGGGAAGAA+AGG | 0.415835 | 4_1:-79600500 | Msa0575690:CDS |
| GAATATAGTGGCCAAATTAG+AGG | 0.423712 | 4_1:-79600406 | Msa0575690:CDS |
| TATAATCATTGTTATCAGTT+GGG | 0.430994 | 4_1:+79601201 | None:intergenic |
| CTTCTTCCGCTTCCACTGAT+AGG | 0.431977 | 4_1:-79600890 | Msa0575690:CDS |
| GCCAACATCTACAGGGAACT+TGG | 0.432798 | 4_1:+79600674 | None:intergenic |
| AAGCCTTATATTTCGAATTG+AGG | 0.434217 | 4_1:-79594879 | Msa0575690:intron |
| CTACCATTACAGACGGTGAT+TGG | 0.434974 | 4_1:-79601109 | Msa0575690:CDS |
| CGCCGAGAACATTCTCCATC+AGG | 0.444439 | 4_1:-79601468 | Msa0575690:intron |
| GTCGAACTTAACTCGAGAAC+AGG | 0.447717 | 4_1:-79594183 | Msa0575690:three_prime_UTR |
| ATATGATGATAAGGGATTCA+TGG | 0.448695 | 4_1:-79594085 | Msa0575690:three_prime_UTR |
| TTAAGTTGTCTTTAGTGCAT+TGG | 0.453611 | 4_1:-79594358 | Msa0575690:three_prime_UTR |
| AATCAATGTTATCAAGGAAA+AGG | 0.460558 | 4_1:-79600430 | Msa0575690:CDS |
| AGTTGCACAATTACAGGAAA+AGG | 0.462451 | 4_1:-79596932 | Msa0575690:intron |
| TGCCTTAAAATACGAGGTGC+AGG | 0.463149 | 4_1:+79601047 | None:intergenic |
| AACTGAAAACTGTGATAAAA+GGG | 0.464363 | 4_1:-79600647 | Msa0575690:CDS |
| GGGAGGTGCATCAATACTAC+TGG | 0.467626 | 4_1:+79601289 | None:intergenic |
| CCATCGGATGAGGGTAGATC+TGG | 0.471208 | 4_1:-79594455 | Msa0575690:CDS |
| ACAGTTACTCAAGTACTTCA+AGG | 0.474054 | 4_1:-79595696 | Msa0575690:CDS |
| CACTCTGGCAAGAAACAGCT+GGG | 0.475094 | 4_1:-79594620 | Msa0575690:CDS |
| ACATTCTAGCCCATCGGATG+AGG | 0.478457 | 4_1:-79594465 | Msa0575690:CDS |
| TCACTCTGGCAAGAAACAGC+TGG | 0.479710 | 4_1:-79594621 | Msa0575690:CDS |
| TATAAATCACCCACAAATGA+AGG | 0.480480 | 4_1:+79594498 | None:intergenic |
| CTCTCTAGTCAGTAGCTTGG+AGG | 0.482093 | 4_1:-79594014 | Msa0575690:three_prime_UTR |
| TTGAGGAATCCTAATCAAAC+TGG | 0.483034 | 4_1:-79597265 | Msa0575690:CDS |
| AGCAGGACATTCCTCTATGA+TGG | 0.483121 | 4_1:+79594156 | None:intergenic |
| ATGCTGCTCATATGATGATA+AGG | 0.485522 | 4_1:-79594094 | Msa0575690:three_prime_UTR |
| AGCTCAACTTCAACTTCCGT+TGG | 0.487013 | 4_1:+79595281 | None:intergenic |
| TTGGATATTATTTCTTACTC+CGG | 0.487434 | 4_1:-79594339 | Msa0575690:three_prime_UTR |
| ACAGAAAGGCAATACCAGTA+AGG | 0.487654 | 4_1:-79600719 | Msa0575690:CDS |
| TTGCCGCTGCTCTCTCAGCT+AGG | 0.488439 | 4_1:+79600457 | None:intergenic |
| GTTGAGACCAAGGTAGATCA+TGG | 0.490319 | 4_1:-79600780 | Msa0575690:CDS |
| ACTGGAGTATGATTGTGTTA+TGG | 0.491577 | 4_1:-79594401 | Msa0575690:exon |
| ATCTGGTGCCGTGATCTCAT+TGG | 0.491967 | 4_1:-79594438 | Msa0575690:CDS |
| TGACTTAGAATCTGGATTGT+GGG | 0.493062 | 4_1:-79594687 | Msa0575690:CDS |
| AGTCAGTAGCTTGGAGGGAC+GGG | 0.493279 | 4_1:-79594008 | Msa0575690:three_prime_UTR |
| GACGAGAACATGTCAGTCTC+AGG | 0.493799 | 4_1:-79594743 | Msa0575690:CDS |
| AAAAGCAATCAATGTTATCA+AGG | 0.496877 | 4_1:-79600436 | Msa0575690:CDS |
| GAAATATATAATAATGATGA+AGG | 0.496885 | 4_1:-79594256 | Msa0575690:three_prime_UTR |
| CCTCTGCAAAGATGTTGAAC+TGG | 0.497882 | 4_1:+79600959 | None:intergenic |
| GGAACTCAACGGCAAAATTG+TGG | 0.498403 | 4_1:-79594541 | Msa0575690:CDS |
| TTATAATCATTGTTATCAGT+TGG | 0.498482 | 4_1:+79601200 | None:intergenic |
| TGCTAAATCCACCAGAGGAC+AGG | 0.500161 | 4_1:-79600841 | Msa0575690:CDS |
| ACTAACAGATTCCTGTCCTC+TGG | 0.501207 | 4_1:+79600830 | None:intergenic |
| TGCCTGATGGAGAATGTTCT+CGG | 0.504796 | 4_1:+79601466 | None:intergenic |
| TGCTGCTCATATGATGATAA+GGG | 0.504860 | 4_1:-79594093 | Msa0575690:three_prime_UTR |
| AGCCTCTCTAGTCAGTAGCT+TGG | 0.506207 | 4_1:-79594017 | Msa0575690:three_prime_UTR |
| CTTAAAGGAGAAAATGATGA+TGG | 0.509081 | 4_1:-79600927 | Msa0575690:CDS |
| GAACTCAACGGCAAAATTGT+GGG | 0.509128 | 4_1:-79594540 | Msa0575690:CDS |
| ATGCTGTAGCTAGCTTCAAA+AGG | 0.509152 | 4_1:-79597009 | Msa0575690:intron |
| GCAGCTTCAGAGCACTATGA+TGG | 0.516795 | 4_1:-79599996 | Msa0575690:CDS |
| ACATCTAATGATTTGAAAAG+GGG | 0.518633 | 4_1:-79600591 | Msa0575690:CDS |
| AAGTCACTTGATGATGAGGC+AGG | 0.519583 | 4_1:+79594704 | None:intergenic |
| TTAAATGATCAGTCATCTGA+TGG | 0.521059 | 4_1:+79595246 | None:intergenic |
| TTGAATTCATCGAGATAAGA+AGG | 0.521412 | 4_1:+79594215 | None:intergenic |
| TATGATGATAAGGGATTCAT+GGG | 0.522200 | 4_1:-79594084 | Msa0575690:three_prime_UTR |
| GCACCTCCCAAACCAGGTGC+CGG | 0.523859 | 4_1:-79601275 | Msa0575690:CDS |
| AGTCCAATCACCGTCTGTAA+TGG | 0.531178 | 4_1:+79601106 | None:intergenic |
| ATTCCTCTTGATATCAGAAA+CGG | 0.531281 | 4_1:+79600998 | None:intergenic |
| TAGAGCTCAGAAGGAGCTTG+AGG | 0.532289 | 4_1:-79597282 | Msa0575690:CDS |
| TCTTGAATTGATCCTTGAGA+GGG | 0.535675 | 4_1:+79601246 | None:intergenic |
| ACCAGAATTACTGCTGGAAG+AGG | 0.536737 | 4_1:-79600742 | Msa0575690:CDS |
| TGCCGGTGGTGTCCCTCTCA+AGG | 0.537246 | 4_1:-79601258 | Msa0575690:CDS |
| AACAATGGAAGCTGTTGAGT+TGG | 0.537487 | 4_1:-79599972 | Msa0575690:CDS |
| TGATTATTATATTAATGCCA+AGG | 0.537853 | 4_1:+79593961 | None:intergenic |
| AAATTCACCAGAATTACTGC+TGG | 0.539129 | 4_1:-79600748 | Msa0575690:CDS |
| TCTGATTCAGATACGGACTC+TGG | 0.541807 | 4_1:-79600543 | Msa0575690:CDS |
| CAAGGAAAAGGAGAATATAG+TGG | 0.542419 | 4_1:-79600418 | Msa0575690:CDS |
| TCACCGTCTGTAATGGTAGG+AGG | 0.542961 | 4_1:+79601113 | None:intergenic |
| AGAAAGGCAATACCAGTAAG+GGG | 0.544933 | 4_1:-79600717 | Msa0575690:CDS |
| GTGACTTAGAATCTGGATTG+TGG | 0.546448 | 4_1:-79594688 | Msa0575690:CDS |
| TGAATCAGAACTTCCATCAC+TGG | 0.547149 | 4_1:+79600557 | None:intergenic |
| TTCTTGAATTGATCCTTGAG+AGG | 0.547361 | 4_1:+79601245 | None:intergenic |
| TGGGTGCCCATGATCTACCT+TGG | 0.548798 | 4_1:+79600773 | None:intergenic |
| GAAGGAGATAGAAGAGCCAA+CGG | 0.549566 | 4_1:-79595297 | Msa0575690:CDS |
| CCACCGGCACCTGGTTTGGG+AGG | 0.549904 | 4_1:+79601272 | None:intergenic |
| CCAGATCTACCCTCATCCGA+TGG | 0.552413 | 4_1:+79594455 | None:intergenic |
| CCCACAAATGAAGGCAAACA+AGG | 0.552936 | 4_1:+79594507 | None:intergenic |
| CAGAAAGGCAATACCAGTAA+GGG | 0.554124 | 4_1:-79600718 | Msa0575690:CDS |
| TAGTCAGTAGCTTGGAGGGA+CGG | 0.555196 | 4_1:-79594009 | Msa0575690:three_prime_UTR |
| TATCCGTTTCTGATATCAAG+AGG | 0.555425 | 4_1:-79601001 | Msa0575690:CDS |
| AGAGGGACACCACCGGCACC+TGG | 0.556146 | 4_1:+79601263 | None:intergenic |
| TTCTGAAAGTGAACATGAGA+GGG | 0.561577 | 4_1:-79600508 | Msa0575690:CDS |
| GGTTCTTCTATGGCCAGTGA+TGG | 0.561688 | 4_1:-79600570 | Msa0575690:CDS |
| AAAACATAATAATACCAGAA+TGG | 0.563142 | 4_1:-79599942 | Msa0575690:CDS |
| GCCTTCAATGAAAATATAGC+AGG | 0.565769 | 4_1:+79594139 | None:intergenic |
| AGGAGAAAATGATGATGGCA+AGG | 0.567104 | 4_1:-79600922 | Msa0575690:CDS |
| TTCTAAGTCACTTGATGATG+AGG | 0.568130 | 4_1:+79594700 | None:intergenic |
| TGATATTGAAATGACAAGGA+AGG | 0.568874 | 4_1:-79595315 | Msa0575690:CDS |
| AGCTAAACAACAAGCACAAG+AGG | 0.569063 | 4_1:-79600346 | Msa0575690:intron |
| ATTGATGCACCTCCCAAACC+AGG | 0.570218 | 4_1:-79601281 | Msa0575690:CDS |
| AACAGATTCCTGTCCTCTGG+TGG | 0.570849 | 4_1:+79600833 | None:intergenic |
| AATATAGTGGCCAAATTAGA+GGG | 0.570966 | 4_1:-79600405 | Msa0575690:CDS |
| AGACTGCCTATCAGTGGAAG+CGG | 0.571112 | 4_1:+79600884 | None:intergenic |
| GCCAAGTTCCCTGTAGATGT+TGG | 0.572119 | 4_1:-79600675 | Msa0575690:CDS |
| ATAATGATGAAGGAAAATAC+AGG | 0.572348 | 4_1:-79594246 | Msa0575690:three_prime_UTR |
| TCAAAAGAGTCTCTTCATGA+AGG | 0.572456 | 4_1:-79599155 | Msa0575690:intron |
| TCTACCTTGGTCTCAACCAC+AGG | 0.573836 | 4_1:+79600786 | None:intergenic |
| GTTCCACTGTACAGCTGCGA+GGG | 0.576044 | 4_1:+79599724 | None:intergenic |
| GAGCACTATGATGGAAACAA+TGG | 0.577666 | 4_1:-79599987 | Msa0575690:CDS |
| ACCACCTGTGGTTGAGACCA+AGG | 0.578290 | 4_1:-79600790 | Msa0575690:CDS |
| CAGATCTACCCTCATCCGAT+GGG | 0.578444 | 4_1:+79594456 | None:intergenic |
| TGAATCACTCTCATCTGAGA+AGG | 0.584178 | 4_1:-79594903 | Msa0575690:CDS |
| TGTACATCAAGCACACATAG+TGG | 0.584349 | 4_1:-79594316 | Msa0575690:three_prime_UTR |
| CAATCACCGTCTGTAATGGT+AGG | 0.587007 | 4_1:+79601110 | None:intergenic |
| TACATTAGACTGCCTATCAG+TGG | 0.588488 | 4_1:+79600878 | None:intergenic |
| CCTCCCAAACCAGGTGCCGG+TGG | 0.588510 | 4_1:-79601272 | Msa0575690:CDS |
| TATGTTCTCCAATGAGATCA+CGG | 0.591089 | 4_1:+79594430 | None:intergenic |
| CATTCTAGCCCATCGGATGA+GGG | 0.591091 | 4_1:-79594464 | Msa0575690:CDS |
| TGGAAGTTCTGATTCAGATA+CGG | 0.593981 | 4_1:-79600550 | Msa0575690:CDS |
| CACTTCTGATAAACCACCTG+TGG | 0.597469 | 4_1:-79600802 | Msa0575690:CDS |
| TAAAGACAACTTAAAAGCCA+AGG | 0.597476 | 4_1:+79594367 | None:intergenic |
| TTGGAGAACATAAATAACAC+TGG | 0.599980 | 4_1:-79594419 | Msa0575690:CDS |
| ACCTTGGTCTCAACCACAGG+TGG | 0.601679 | 4_1:+79600789 | None:intergenic |
| CACCGTCTGTAATGGTAGGA+GGG | 0.602202 | 4_1:+79601114 | None:intergenic |
| ATCCTTGAGAGGGACACCAC+CGG | 0.602615 | 4_1:+79601256 | None:intergenic |
| TTTAATACAGAAACAAGCTA+AGG | 0.604266 | 4_1:-79595228 | Msa0575690:intron |
| ATTCTGAAAGTGAACATGAG+AGG | 0.605224 | 4_1:-79600509 | Msa0575690:CDS |
| AAGTCTAGAGAAAATACTTG+AGG | 0.605238 | 4_1:-79600373 | Msa0575690:CDS |
| GATGTCACATTCTAGCCCAT+CGG | 0.605593 | 4_1:-79594471 | Msa0575690:CDS |
| TCTCTAGTCAGTAGCTTGGA+GGG | 0.606820 | 4_1:-79594013 | Msa0575690:three_prime_UTR |
| GGAAGAGATCCAATTCGCCA+TGG | 0.607085 | 4_1:+79601502 | None:intergenic |
| CAGTTACTCAAGTACTTCAA+GGG | 0.608312 | 4_1:-79595695 | Msa0575690:intron |
| GACTAGAGAGGCTCATTCTG+TGG | 0.609991 | 4_1:+79594027 | None:intergenic |
| ACTGCTGGAAGAGGACAGAA+AGG | 0.610482 | 4_1:-79600733 | Msa0575690:CDS |
| CCAGTTCAACATCTTTGCAG+AGG | 0.615184 | 4_1:-79600959 | Msa0575690:CDS |
| GATCCCTCGCAGCTGTACAG+TGG | 0.620209 | 4_1:-79599727 | Msa0575690:CDS |
| TATCAAATCAAATCAAACCA+TGG | 0.620640 | 4_1:-79601519 | Msa0575690:exon |
| ACAGTGGAACCTTGAAGTAG+AGG | 0.622799 | 4_1:-79599711 | Msa0575690:intron |
| GAACAGGTACTCCATCATAG+AGG | 0.625110 | 4_1:-79594167 | Msa0575690:three_prime_UTR |
| GGCACAGCGTTAGAAGCAGA+AGG | 0.628458 | 4_1:+79601068 | None:intergenic |
| ATAAAAGCCAGAATTCACTC+TGG | 0.630454 | 4_1:-79594635 | Msa0575690:CDS |
| TTGAAGTTGAGCTCAAGTGT+AGG | 0.637736 | 4_1:-79595271 | Msa0575690:CDS |
| CGCTTCGTAAGAACAACGAG+AGG | 0.640173 | 4_1:-79601331 | Msa0575690:CDS |
| TTGAGACCAAGGTAGATCAT+GGG | 0.643453 | 4_1:-79600779 | Msa0575690:CDS |
| GAAAGGCAATACCAGTAAGG+GGG | 0.650132 | 4_1:-79600716 | Msa0575690:CDS |
| TACACGTTTAGCTAAACTGG+AGG | 0.651008 | 4_1:-79599912 | Msa0575690:intron |
| GGTTCCACTGTACAGCTGCG+AGG | 0.655101 | 4_1:+79599723 | None:intergenic |
| AACCCTCCTACCATTACAGA+CGG | 0.655393 | 4_1:-79601116 | Msa0575690:CDS |
| TGACTCAGCAGGCAGTGTCG+AGG | 0.666460 | 4_1:-79594772 | Msa0575690:intron |
| AAGCTGATATTGAAATGACA+AGG | 0.671405 | 4_1:-79595319 | Msa0575690:CDS |
| AAAGGCAATACCAGTAAGGG+GGG | 0.672770 | 4_1:-79600715 | Msa0575690:CDS |
| ATGCAGAGGATTGACGTCCG+CGG | 0.679163 | 4_1:-79595760 | Msa0575690:intron |
| CTCCAAGCTACTGACTAGAG+AGG | 0.690753 | 4_1:+79594015 | None:intergenic |
| GTTGACTGCCAACATCTACA+GGG | 0.691069 | 4_1:+79600667 | None:intergenic |
| GATCCTAGCTGAGAGAGCAG+CGG | 0.698731 | 4_1:-79600460 | Msa0575690:CDS |
| GTTTGAACGAGAAATTCTTG+AGG | 0.701624 | 4_1:-79596980 | Msa0575690:CDS |
| TATGTGTGCTTGATGTACAC+CGG | 0.707164 | 4_1:+79594320 | None:intergenic |
| GGTTCAGATCGATCAACAAG+CGG | 0.710542 | 4_1:-79601360 | Msa0575690:intron |
| ACTCTGGCAAGAAACAGCTG+GGG | 0.721667 | 4_1:-79594619 | Msa0575690:CDS |
| ACTGATGCTAAATCCACCAG+AGG | 0.728447 | 4_1:-79600846 | Msa0575690:CDS |
| TACATTTGTAAACAGCTCCG+CGG | 0.730771 | 4_1:+79595743 | None:intergenic |
| CTGATGGAGAATGTTCTCGG+CGG | 0.777389 | 4_1:+79601469 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGAAATTAAATAAGAAAAT+AGG | + | chr4_1:79594000-79594019 | None:intergenic | 10.0% |
| !! | TATATATTAGTAGAAAAATA+TGG | - | chr4_1:79596624-79596643 | Msa0575690:intron | 10.0% |
| !! | TTTGAAAGTAAAATATTTAA+CGG | - | chr4_1:79598942-79598961 | Msa0575690:intron | 10.0% |
| !! | CTAAAAATCATAATTAAAAA+AGG | + | chr4_1:79599862-79599881 | None:intergenic | 10.0% |
| !!! | CTTTTTTAATTATGATTTTT+AGG | - | chr4_1:79599860-79599879 | Msa0575690:intron | 10.0% |
| !!! | AATAAACTTTTTTAACATAA+AGG | + | chr4_1:79600468-79600487 | None:intergenic | 10.0% |
| !!! | AAGAAAAAATAATTCATTTT+TGG | - | chr4_1:79601511-79601530 | Msa0575690:exon | 10.0% |
| !! | TAAAAAGTGAAAATAAGAAA+TGG | + | chr4_1:79596352-79596371 | None:intergenic | 15.0% |
| !! | ATTAAAAGTGAATACATAAA+AGG | - | chr4_1:79596778-79596797 | Msa0575690:intron | 15.0% |
| !! | CTACATAATAATTAAATCTT+TGG | + | chr4_1:79597515-79597534 | None:intergenic | 15.0% |
| !! | ATTTAATTATTATGTAGTGT+TGG | - | chr4_1:79597518-79597537 | Msa0575690:intron | 15.0% |
| !!! | ATTGTTAATTTTTTTGTTGT+TGG | - | chr4_1:79597787-79597806 | Msa0575690:intron | 15.0% |
| !! | AAAGATACTTCTTAAAATTT+GGG | + | chr4_1:79598020-79598039 | None:intergenic | 15.0% |
| !! | CACAAAAAATGTTTAAAAAA+GGG | + | chr4_1:79598304-79598323 | None:intergenic | 15.0% |
| !! | TCACAAAAAATGTTTAAAAA+AGG | + | chr4_1:79598305-79598324 | None:intergenic | 15.0% |
| !!! | TTTTTAAACATTTTTTGTGA+AGG | - | chr4_1:79598305-79598324 | Msa0575690:intron | 15.0% |
| !!! | TATTTTACTTTCAAATCTAA+TGG | + | chr4_1:79598937-79598956 | None:intergenic | 15.0% |
| !! | CATGTTAAAATCAATTATAA+AGG | - | chr4_1:79599801-79599820 | Msa0575690:intron | 15.0% |
| !!! | ACAATTAGATTATATTTTTG+TGG | - | chr4_1:79600819-79600838 | Msa0575690:CDS | 15.0% |
| !!! | TTATTATATATTTCTGGTTA+TGG | + | chr4_1:79601142-79601161 | None:intergenic | 15.0% |
| !! | TCATCATTATTATATATTTC+TGG | + | chr4_1:79601148-79601167 | None:intergenic | 15.0% |
| !! | GAAATATATAATAATGATGA+AGG | - | chr4_1:79601148-79601167 | Msa0575690:CDS | 15.0% |
| !! | GATAATAGAATAGAATTAGA+AGG | + | chr4_1:79593869-79593888 | None:intergenic | 20.0% |
| !! | TATAATCATTGTTATCAGTT+GGG | + | chr4_1:79594206-79594225 | None:intergenic | 20.0% |
| !! | TTATAATCATTGTTATCAGT+TGG | + | chr4_1:79594207-79594226 | None:intergenic | 20.0% |
| !! | ACTGATAACAATGATTATAA+TGG | - | chr4_1:79594207-79594226 | Msa0575690:three_prime_UTR | 20.0% |
| !! | AACATCTAATGATTTGAAAA+GGG | - | chr4_1:79594812-79594831 | Msa0575690:intron | 20.0% |
| !!! | TTTTAAGTTTTGTGTTATAC+TGG | - | chr4_1:79595123-79595142 | Msa0575690:intron | 20.0% |
| !!! | CTTTACTTTGAAATTAATCA+CGG | - | chr4_1:79595299-79595318 | Msa0575690:CDS | 20.0% |
| !! | AAAACATAATAATACCAGAA+TGG | - | chr4_1:79595462-79595481 | Msa0575690:intron | 20.0% |
| !!! | ATGTTGATTCAACATTTTTA+AGG | - | chr4_1:79595516-79595535 | Msa0575690:intron | 20.0% |
| !!! | TCATAGAATACAAGATTTTT+TGG | - | chr4_1:79595758-79595777 | Msa0575690:intron | 20.0% |
| !! | TTAGAATGAGAATCTTATAT+TGG | - | chr4_1:79596102-79596121 | Msa0575690:intron | 20.0% |
| !!! | AAAATTGCACATTTTCAAAT+TGG | - | chr4_1:79596664-79596683 | Msa0575690:intron | 20.0% |
| !!! | ATTCACTTTTAATTACACAA+CGG | + | chr4_1:79596771-79596790 | None:intergenic | 20.0% |
| !! | ATGGTTGAAATAAAATATAC+TGG | + | chr4_1:79596834-79596853 | None:intergenic | 20.0% |
| !! | AGCTCTTAATAACAAAAAAA+AGG | - | chr4_1:79596951-79596970 | Msa0575690:CDS | 20.0% |
| !! | CTTAATAACAAAAAAAAGGT+TGG | - | chr4_1:79596955-79596974 | Msa0575690:CDS | 20.0% |
| !! | CAAAGATACTTCTTAAAATT+TGG | + | chr4_1:79598021-79598040 | None:intergenic | 20.0% |
| !!! | TTTGTGTAGAAGTATAAAAT+TGG | - | chr4_1:79598598-79598617 | Msa0575690:intron | 20.0% |
| !! | AGTTTGTAAAAATCTTTCTT+GGG | - | chr4_1:79600318-79600337 | Msa0575690:intron | 20.0% |
| !! | TGATTATTATATTAATGCCA+AGG | + | chr4_1:79601446-79601465 | None:intergenic | 20.0% |
| ! | TTTCTTTCTTTCTGTTAGTT+AGG | + | chr4_1:79593819-79593838 | None:intergenic | 25.0% |
| ! | TATCAAATCAAATCAAACCA+TGG | - | chr4_1:79593885-79593904 | Msa0575690:three_prime_UTR | 25.0% |
| ! | ATTGATTGATTGATGGAAAA+TGG | + | chr4_1:79593975-79593994 | None:intergenic | 25.0% |
| ! | ATAGGAAATTGATTGATTGA+TGG | + | chr4_1:79593982-79594001 | None:intergenic | 25.0% |
| ! | GTAATTCTGGTGAATTTAAT+GGG | + | chr4_1:79594653-79594672 | None:intergenic | 25.0% |
| ! | AGTAATTCTGGTGAATTTAA+TGG | + | chr4_1:79594654-79594673 | None:intergenic | 25.0% |
| ! | AACTGAAAACTGTGATAAAA+GGG | - | chr4_1:79594757-79594776 | Msa0575690:CDS | 25.0% |
| ! | CAAATCATTAGATGTTGAAT+TGG | + | chr4_1:79594808-79594827 | None:intergenic | 25.0% |
| ! | CAACATCTAATGATTTGAAA+AGG | - | chr4_1:79594811-79594830 | Msa0575690:intron | 25.0% |
| ! | ACATCTAATGATTTGAAAAG+GGG | - | chr4_1:79594813-79594832 | Msa0575690:intron | 25.0% |
| ! | AAAAGCAATCAATGTTATCA+AGG | - | chr4_1:79594968-79594987 | Msa0575690:intron | 25.0% |
| ! | AATCAATGTTATCAAGGAAA+AGG | - | chr4_1:79594974-79594993 | Msa0575690:intron | 25.0% |
| ! | GATAATCTTGTATATGTTTG+TGG | - | chr4_1:79595179-79595198 | Msa0575690:intron | 25.0% |
| ! | AAACAGTGAAAACTTGATAA+GGG | + | chr4_1:79595256-79595275 | None:intergenic | 25.0% |
| !!! | AAAATAGACTTGTTACTACT+TGG | - | chr4_1:79595816-79595835 | Msa0575690:intron | 25.0% |
| ! | TCATTAATCTTCACACAATT+AGG | + | chr4_1:79595870-79595889 | None:intergenic | 25.0% |
| ! | AGATAAGTTCTTCAGTTAAT+TGG | + | chr4_1:79595953-79595972 | None:intergenic | 25.0% |
| ! | TTGCAATCACAAAATCTTTA+GGG | + | chr4_1:79596064-79596083 | None:intergenic | 25.0% |
| ! | TTTGCAATCACAAAATCTTT+AGG | + | chr4_1:79596065-79596084 | None:intergenic | 25.0% |
| !!! | TGTTGCTTATGATATGTTTT+TGG | - | chr4_1:79596185-79596204 | Msa0575690:intron | 25.0% |
| !!! | TTATGATATGTTTTTGGATC+AGG | - | chr4_1:79596191-79596210 | Msa0575690:intron | 25.0% |
| !!! | ATTTGTTCTCTGAAACATTA+GGG | - | chr4_1:79596296-79596315 | Msa0575690:intron | 25.0% |
| ! | CAAACAGAATGAAAACAATA+TGG | + | chr4_1:79596387-79596406 | None:intergenic | 25.0% |
| ! | TTAAGCTCAAAATTATGCAT+TGG | + | chr4_1:79596503-79596522 | None:intergenic | 25.0% |
| ! | AAATATGGTCAAAGTAAGTT+AGG | - | chr4_1:79596639-79596658 | Msa0575690:intron | 25.0% |
| !! | TGTATTAAATCTTTGAAAGC+AGG | - | chr4_1:79596726-79596745 | Msa0575690:intron | 25.0% |
| !!! | TTTTTTTTCTCGAAGTAATC+AGG | - | chr4_1:79596808-79596827 | Msa0575690:intron | 25.0% |
| ! | CTATCAAAAGACACAATTAA+TGG | + | chr4_1:79596853-79596872 | None:intergenic | 25.0% |
| !! | CATTAATTGTGTCTTTTGAT+AGG | - | chr4_1:79596851-79596870 | Msa0575690:intron | 25.0% |
| ! | CGAAACAAATATATAAACCA+TGG | + | chr4_1:79596889-79596908 | None:intergenic | 25.0% |
| !!! | AACAAAAAAAAGGTTGGTAT+AGG | - | chr4_1:79596961-79596980 | Msa0575690:CDS | 25.0% |
| ! | AGCTTGAAAATTATCCTTAT+AGG | + | chr4_1:79596987-79597006 | None:intergenic | 25.0% |
| ! | ATATGCACAACAATTACTTT+AGG | - | chr4_1:79597027-79597046 | Msa0575690:intron | 25.0% |
| ! | AAAAACTGTTTGAACAAAAC+AGG | - | chr4_1:79597077-79597096 | Msa0575690:intron | 25.0% |
| ! | GATATTCTTAAACAGAGAAA+GGG | + | chr4_1:79597411-79597430 | None:intergenic | 25.0% |
| ! | ATTAATAAGCAAAACTACCA+TGG | + | chr4_1:79597483-79597502 | None:intergenic | 25.0% |
| ! | TAATTCAACCATTACAAAAC+CGG | + | chr4_1:79597684-79597703 | None:intergenic | 25.0% |
| ! | AACCACTTATAAGAAATACT+TGG | + | chr4_1:79597947-79597966 | None:intergenic | 25.0% |
| ! | ATACTTCTTAAAATTTGGGT+TGG | + | chr4_1:79598016-79598035 | None:intergenic | 25.0% |
| !!! | TAAGAAGTATCTTTGCAAAT+TGG | - | chr4_1:79598026-79598045 | Msa0575690:intron | 25.0% |
| ! | TCTTTGCAAATTGGTTATTT+AGG | - | chr4_1:79598035-79598054 | Msa0575690:intron | 25.0% |
| ! | CTTTGCAAATTGGTTATTTA+GGG | - | chr4_1:79598036-79598055 | Msa0575690:intron | 25.0% |
| ! | TGTTTAAAAAAGGGAATATG+TGG | + | chr4_1:79598295-79598314 | None:intergenic | 25.0% |
| !! | GCAACGTATTTCATTATTTT+TGG | - | chr4_1:79598564-79598583 | Msa0575690:intron | 25.0% |
| !! | CAATTCTAAGAATTGGAATT+TGG | + | chr4_1:79598739-79598758 | None:intergenic | 25.0% |
| ! | AGCTAACAAAAGATATAGTT+GGG | + | chr4_1:79598801-79598820 | None:intergenic | 25.0% |
| ! | TAGCTAACAAAAGATATAGT+TGG | + | chr4_1:79598802-79598821 | None:intergenic | 25.0% |
| !! | TCAAAAGTGTATACAAAAAG+GGG | + | chr4_1:79598826-79598845 | None:intergenic | 25.0% |
| !! | GTCAAAAGTGTATACAAAAA+GGG | + | chr4_1:79598827-79598846 | None:intergenic | 25.0% |
| !! | AGTCAAAAGTGTATACAAAA+AGG | + | chr4_1:79598828-79598847 | None:intergenic | 25.0% |
| ! | TAACGGTTGTGATATATTAA+AGG | - | chr4_1:79598959-79598978 | Msa0575690:intron | 25.0% |
| !!! | GTCTTTTTTAAACTATCAGA+GGG | + | chr4_1:79599019-79599038 | None:intergenic | 25.0% |
| !!! | TGTCTTTTTTAAACTATCAG+AGG | + | chr4_1:79599020-79599039 | None:intergenic | 25.0% |
| ! | TTTAAAAAAGACAGAAAGAG+AGG | - | chr4_1:79599027-79599046 | Msa0575690:intron | 25.0% |
| !! | GTATTGATAATCATTAAGTG+TGG | + | chr4_1:79599304-79599323 | None:intergenic | 25.0% |
| ! | TTCCTTTGACTATTCAAATT+TGG | + | chr4_1:79599344-79599363 | None:intergenic | 25.0% |
| !!! | AATAGTGTTTTGACTAAGAA+TGG | - | chr4_1:79599398-79599417 | Msa0575690:intron | 25.0% |
| ! | TTAAATAGTTTCAACCTCTA+AGG | - | chr4_1:79599834-79599853 | Msa0575690:intron | 25.0% |
| ! | TAAATAGTTTCAACCTCTAA+GGG | - | chr4_1:79599835-79599854 | Msa0575690:intron | 25.0% |
| !!! | ATTTTTTAGATACGATATCC+AGG | + | chr4_1:79599916-79599935 | None:intergenic | 25.0% |
| ! | AAAGTCAATATGATTTCTCT+TGG | - | chr4_1:79600015-79600034 | Msa0575690:intron | 25.0% |
| ! | TTTAATACAGAAACAAGCTA+AGG | - | chr4_1:79600176-79600195 | Msa0575690:intron | 25.0% |
| ! | GCAAAAATATTACATCTAAC+TGG | + | chr4_1:79600218-79600237 | None:intergenic | 25.0% |
| !!! | AAGAATCACTGTTTTAATTC+AGG | - | chr4_1:79600246-79600265 | Msa0575690:intron | 25.0% |
| ! | CAGTTTGTAAAAATCTTTCT+TGG | - | chr4_1:79600317-79600336 | Msa0575690:intron | 25.0% |
| !! | ATCAACAAATTAGTCTGATA+TGG | - | chr4_1:79600357-79600376 | Msa0575690:CDS | 25.0% |
| !! | TATGGTTTTCATAATAAAGC+AGG | - | chr4_1:79600375-79600394 | Msa0575690:CDS | 25.0% |
| ! | ATACCTCAATTCGAAATATA+AGG | + | chr4_1:79600531-79600550 | None:intergenic | 25.0% |
| !!! | TTAGATTATATTTTTGTGGC+TGG | - | chr4_1:79600823-79600842 | Msa0575690:CDS | 25.0% |
| !! | TTGGATATTATTTCTTACTC+CGG | - | chr4_1:79601065-79601084 | Msa0575690:CDS | 25.0% |
| ! | ATAATGATGAAGGAAAATAC+AGG | - | chr4_1:79601158-79601177 | Msa0575690:CDS | 25.0% |
| ATTGATTGATGGAAAATGGA+CGG | + | chr4_1:79593971-79593990 | None:intergenic | 30.0% | |
| !!! | AGTTGCAGTAGTAGTTTTAA+GGG | + | chr4_1:79594250-79594269 | None:intergenic | 30.0% |
| ! | CTATTTTGCCTTAAAATACG+AGG | + | chr4_1:79594366-79594385 | None:intergenic | 30.0% |
| ATTCCTCTTGATATCAGAAA+CGG | + | chr4_1:79594409-79594428 | None:intergenic | 30.0% | |
| CTTAAAGGAGAAAATGATGA+TGG | - | chr4_1:79594477-79594496 | Msa0575690:CDS | 30.0% | |
| CAACTGAAAACTGTGATAAA+AGG | - | chr4_1:79594756-79594775 | Msa0575690:CDS | 30.0% | |
| AATATAGTGGCCAAATTAGA+GGG | - | chr4_1:79594999-79595018 | Msa0575690:intron | 30.0% | |
| AAGTCTAGAGAAAATACTTG+AGG | - | chr4_1:79595031-79595050 | Msa0575690:intron | 30.0% | |
| CAAACAGTGAAAACTTGATA+AGG | + | chr4_1:79595257-79595276 | None:intergenic | 30.0% | |
| CAAAGTAAAGTCATCCTATT+AGG | + | chr4_1:79595289-79595308 | None:intergenic | 30.0% | |
| TCACTGATAAATGTATGGAT+TGG | - | chr4_1:79595626-79595645 | Msa0575690:intron | 30.0% | |
| CTAAAAATACCTCTACTTCA+AGG | + | chr4_1:79595705-79595724 | None:intergenic | 30.0% | |
| TGGTACTTATCACAAAGATT+TGG | - | chr4_1:79595836-79595855 | Msa0575690:intron | 30.0% | |
| AAAAATGTCCTAAATACTGC+TGG | - | chr4_1:79595997-79596016 | Msa0575690:intron | 30.0% | |
| AAATCAATGACTTTGCAAAG+CGG | + | chr4_1:79596280-79596299 | None:intergenic | 30.0% | |
| !! | GATTTGTTCTCTGAAACATT+AGG | - | chr4_1:79596295-79596314 | Msa0575690:intron | 30.0% |
| TCAACTGTGTCAAGTATTAT+GGG | + | chr4_1:79596466-79596485 | None:intergenic | 30.0% | |
| TTCAAATTGGTCATCTATTG+CGG | - | chr4_1:79596677-79596696 | Msa0575690:intron | 30.0% | |
| CAGGAAACAAATTGAAAATG+TGG | - | chr4_1:79596745-79596764 | Msa0575690:intron | 30.0% | |
| ! | CAGTTTTTCATTGTTCTCTT+CGG | + | chr4_1:79597065-79597084 | None:intergenic | 30.0% |
| ! | AAGTTTGCTTCAAACCTAAA+TGG | + | chr4_1:79597103-79597122 | None:intergenic | 30.0% |
| TAACCCAAATTCGAATAATG+TGG | + | chr4_1:79597155-79597174 | None:intergenic | 30.0% | |
| ! | ACATTATTCGAATTTGGGTT+AGG | - | chr4_1:79597154-79597173 | Msa0575690:intron | 30.0% |
| TTGATATTGTAACTTGAGCT+AGG | - | chr4_1:79597317-79597336 | Msa0575690:intron | 30.0% | |
| GGATATTCTTAAACAGAGAA+AGG | + | chr4_1:79597412-79597431 | None:intergenic | 30.0% | |
| GTTTAAGAATATCCTTGACT+TGG | - | chr4_1:79597418-79597437 | Msa0575690:intron | 30.0% | |
| !! | GGTTTTGTAATGGTTGAATT+AGG | - | chr4_1:79597683-79597702 | Msa0575690:intron | 30.0% |
| AATTAACAATCAGACCCTAT+GGG | + | chr4_1:79597777-79597796 | None:intergenic | 30.0% | |
| AAATTAACAATCAGACCCTA+TGG | + | chr4_1:79597778-79597797 | None:intergenic | 30.0% | |
| TGCCAAGTATTTCTTATAAG+TGG | - | chr4_1:79597942-79597961 | Msa0575690:intron | 30.0% | |
| GCATATCTCATCATTCAAAT+CGG | - | chr4_1:79597968-79597987 | Msa0575690:intron | 30.0% | |
| !! | GGTTTTGTAATGATTGAGTT+GGG | - | chr4_1:79597989-79598008 | Msa0575690:intron | 30.0% |
| !! | GTTTTGTAATGATTGAGTTG+GGG | - | chr4_1:79597990-79598009 | Msa0575690:intron | 30.0% |
| ! | AAATTGGTTATTTAGGGTAC+TGG | - | chr4_1:79598042-79598061 | Msa0575690:intron | 30.0% |
| TTGAGATTATGTTGTGATGA+GGG | - | chr4_1:79598070-79598089 | Msa0575690:intron | 30.0% | |
| ! | TGTGGCATTTTCTTTTTGTT+TGG | - | chr4_1:79598269-79598288 | Msa0575690:intron | 30.0% |
| ! | GAGAGCATAAGTTTAAGAAA+GGG | + | chr4_1:79598332-79598351 | None:intergenic | 30.0% |
| ! | AGAGAGCATAAGTTTAAGAA+AGG | + | chr4_1:79598333-79598352 | None:intergenic | 30.0% |
| TGATAAAGTTGCACAATTAC+AGG | - | chr4_1:79598466-79598485 | Msa0575690:intron | 30.0% | |
| TGGAAAATGAATGACCATAA+CGG | + | chr4_1:79598521-79598540 | None:intergenic | 30.0% | |
| TGAAATATCATAGCTCTTCA+TGG | + | chr4_1:79598541-79598560 | None:intergenic | 30.0% | |
| TACTACAACAAAAGAAACAG+AGG | + | chr4_1:79598626-79598645 | None:intergenic | 30.0% | |
| ! | CATGCAACAATTCTAAGAAT+TGG | + | chr4_1:79598746-79598765 | None:intergenic | 30.0% |
| ! | CTTTCAAATCTAATGGACAA+TGG | + | chr4_1:79598930-79598949 | None:intergenic | 30.0% |
| ! | CTCAAATGTTTCTGATATTG+CGG | + | chr4_1:79599165-79599184 | None:intergenic | 30.0% |
| !! | TCAGAAACATTTGAGTTTTG+AGG | - | chr4_1:79599170-79599189 | Msa0575690:CDS | 30.0% |
| !!! | TTTTGAGGTTCTTACTTCTA+AGG | - | chr4_1:79599185-79599204 | Msa0575690:CDS | 30.0% |
| CTTTGTGAACAAAGATAGTT+TGG | - | chr4_1:79599233-79599252 | Msa0575690:intron | 30.0% | |
| CTCCAAATTTGAATAGTCAA+AGG | - | chr4_1:79599339-79599358 | Msa0575690:intron | 30.0% | |
| AGGAATGTTTGGCAAAAAAA+CGG | - | chr4_1:79599551-79599570 | Msa0575690:intron | 30.0% | |
| !! | TTGTGTTATTTGAAATGCAG+AGG | - | chr4_1:79599630-79599649 | Msa0575690:intron | 30.0% |
| GATTCTTTCACATTCAGTTA+AGG | + | chr4_1:79599779-79599798 | None:intergenic | 30.0% | |
| AATTAAAAAAGGTCCCTTAG+AGG | + | chr4_1:79599851-79599870 | None:intergenic | 30.0% | |
| AAGGCAAAACTTAATGAAGT+TGG | + | chr4_1:79599986-79600005 | None:intergenic | 30.0% | |
| !! | TATTGACTTTGACAAGTTGA+AGG | + | chr4_1:79600005-79600024 | None:intergenic | 30.0% |
| AAGCTGATATTGAAATGACA+AGG | - | chr4_1:79600085-79600104 | Msa0575690:intron | 30.0% | |
| TGATATTGAAATGACAAGGA+AGG | - | chr4_1:79600089-79600108 | Msa0575690:intron | 30.0% | |
| TTAAATGATCAGTCATCTGA+TGG | + | chr4_1:79600161-79600180 | None:intergenic | 30.0% | |
| AAAAGTTTATTCTTGTCGAC+AGG | - | chr4_1:79600477-79600496 | Msa0575690:CDS | 30.0% | |
| ! | AAGCCTTATATTTCGAATTG+AGG | - | chr4_1:79600525-79600544 | Msa0575690:CDS | 30.0% |
| AAGAATAAGTATCATTGCCT+TGG | + | chr4_1:79600562-79600581 | None:intergenic | 30.0% | |
| !!! | TGAATTCTGGCTTTTATCAT+AGG | + | chr4_1:79600766-79600785 | None:intergenic | 30.0% |
| !! | TTTTCTGAAAAGGAACTCAA+CGG | - | chr4_1:79600852-79600871 | Msa0575690:CDS | 30.0% |
| TATAAATCACCCACAAATGA+AGG | + | chr4_1:79600909-79600928 | None:intergenic | 30.0% | |
| TTGGAGAACATAAATAACAC+TGG | - | chr4_1:79600985-79601004 | Msa0575690:CDS | 30.0% | |
| ! | TTATGGCTTATCATTTTCCT+TGG | - | chr4_1:79601020-79601039 | Msa0575690:CDS | 30.0% |
| TAAAGACAACTTAAAAGCCA+AGG | + | chr4_1:79601040-79601059 | None:intergenic | 30.0% | |
| ! | TTAAGTTGTCTTTAGTGCAT+TGG | - | chr4_1:79601046-79601065 | Msa0575690:CDS | 30.0% |
| TTGAATTCATCGAGATAAGA+AGG | + | chr4_1:79601192-79601211 | None:intergenic | 30.0% | |
| ! | TCCTGCTATATTTTCATTGA+AGG | - | chr4_1:79601264-79601283 | Msa0575690:CDS | 30.0% |
| ATATGATGATAAGGGATTCA+TGG | - | chr4_1:79601319-79601338 | Msa0575690:CDS | 30.0% | |
| TATGATGATAAGGGATTCAT+GGG | - | chr4_1:79601320-79601339 | Msa0575690:CDS | 30.0% | |
| TCTTGAATTGATCCTTGAGA+GGG | + | chr4_1:79594161-79594180 | None:intergenic | 35.0% | |
| TTCTTGAATTGATCCTTGAG+AGG | + | chr4_1:79594162-79594181 | None:intergenic | 35.0% | |
| !!! | GTTGCAGTAGTAGTTTTAAG+GGG | + | chr4_1:79594249-79594268 | None:intergenic | 35.0% |
| !! | CAGTTGCAGTAGTAGTTTTA+AGG | + | chr4_1:79594251-79594270 | None:intergenic | 35.0% |
| TATCCGTTTCTGATATCAAG+AGG | - | chr4_1:79594403-79594422 | Msa0575690:exon | 35.0% | |
| AAATTCACCAGAATTACTGC+TGG | - | chr4_1:79594656-79594675 | Msa0575690:CDS | 35.0% | |
| TTTGAAAAGGGGTTCTTCTA+TGG | - | chr4_1:79594824-79594843 | Msa0575690:intron | 35.0% | |
| ! | TGGAAGTTCTGATTCAGATA+CGG | - | chr4_1:79594854-79594873 | Msa0575690:intron | 35.0% |
| ! | ATTCTGAAAGTGAACATGAG+AGG | - | chr4_1:79594895-79594914 | Msa0575690:CDS | 35.0% |
| ! | TTCTGAAAGTGAACATGAGA+GGG | - | chr4_1:79594896-79594915 | Msa0575690:CDS | 35.0% |
| AAAGGAGAAAGAAGAGAGAA+AGG | - | chr4_1:79594922-79594941 | Msa0575690:intron | 35.0% | |
| CAAGGAAAAGGAGAATATAG+TGG | - | chr4_1:79594986-79595005 | Msa0575690:intron | 35.0% | |
| GAATATAGTGGCCAAATTAG+AGG | - | chr4_1:79594998-79595017 | Msa0575690:intron | 35.0% | |
| TTCTTTCTCTCCCTCTAATT+TGG | + | chr4_1:79595012-79595031 | None:intergenic | 35.0% | |
| ! | AGGATGTTTTGTGTAGGATA+TGG | - | chr4_1:79595157-79595176 | Msa0575690:intron | 35.0% |
| AATCACTGAGAACATTAAGC+AGG | + | chr4_1:79595215-79595234 | None:intergenic | 35.0% | |
| GCTTAATGTTCTCAGTGATT+TGG | - | chr4_1:79595215-79595234 | Msa0575690:intron | 35.0% | |
| GTTTGAGAACTTCTCCTAAT+AGG | - | chr4_1:79595272-79595291 | Msa0575690:CDS | 35.0% | |
| ACGTGTAAGAATTTCCATTC+TGG | + | chr4_1:79595479-79595498 | None:intergenic | 35.0% | |
| TCTTACACGTTTAGCTAAAC+TGG | - | chr4_1:79595489-79595508 | Msa0575690:intron | 35.0% | |
| TGTATAGCTTAAAGCACACA+TGG | - | chr4_1:79595552-79595571 | Msa0575690:intron | 35.0% | |
| GCTTGTCACTGATAAATGTA+TGG | - | chr4_1:79595621-79595640 | Msa0575690:intron | 35.0% | |
| ATTCTATGAATCGTGAGAAG+TGG | + | chr4_1:79595747-79595766 | None:intergenic | 35.0% | |
| CTTTAATTGTGATGCCAGTT+TGG | + | chr4_1:79595920-79595939 | None:intergenic | 35.0% | |
| TTTCAGTTCCAGCAGTATTT+AGG | + | chr4_1:79596008-79596027 | None:intergenic | 35.0% | |
| TGCAGAACTCAGACAAAAAA+TGG | - | chr4_1:79596224-79596243 | Msa0575690:intron | 35.0% | |
| TCAAAAGAGTCTCTTCATGA+AGG | - | chr4_1:79596249-79596268 | Msa0575690:intron | 35.0% | |
| GTCAACTGTGTCAAGTATTA+TGG | + | chr4_1:79596467-79596486 | None:intergenic | 35.0% | |
| ! | ATGCATTGGTATGCGTAATA+GGG | + | chr4_1:79596489-79596508 | None:intergenic | 35.0% |
| ! | TATGCATTGGTATGCGTAAT+AGG | + | chr4_1:79596490-79596509 | None:intergenic | 35.0% |
| TCAAATTGGTCATCTATTGC+GGG | - | chr4_1:79596678-79596697 | Msa0575690:intron | 35.0% | |
| AGCTCGTAGACTAATACTTA+AGG | + | chr4_1:79596935-79596954 | None:intergenic | 35.0% | |
| TTGAACAAAACAGGCCATTT+AGG | - | chr4_1:79597086-79597105 | Msa0575690:intron | 35.0% | |
| ! | GTTTGAAGCAAACTTGTGTT+AGG | - | chr4_1:79597108-79597127 | Msa0575690:intron | 35.0% |
| AAACTTGTGTTAGGCTTCTA+TGG | - | chr4_1:79597117-79597136 | Msa0575690:intron | 35.0% | |
| AACTTGTGTTAGGCTTCTAT+GGG | - | chr4_1:79597118-79597137 | Msa0575690:intron | 35.0% | |
| GAGCCACATTATTCGAATTT+GGG | - | chr4_1:79597149-79597168 | Msa0575690:intron | 35.0% | |
| !! | CCTGTTCTGGATTTGTTATT+GGG | + | chr4_1:79597295-79597314 | None:intergenic | 35.0% |
| TACAATATCAAAGCCTGTTC+TGG | + | chr4_1:79597308-79597327 | None:intergenic | 35.0% | |
| TTAGAATATCCTCACCTCTT+GGG | + | chr4_1:79597366-79597385 | None:intergenic | 35.0% | |
| TCTAAGAACACACATCAACT+AGG | - | chr4_1:79597381-79597400 | Msa0575690:intron | 35.0% | |
| TGGAAATTTCGCCTTAATTG+CGG | - | chr4_1:79597538-79597557 | Msa0575690:intron | 35.0% | |
| !! | AAGTGTTGCTTATAAGTGGT+GGG | - | chr4_1:79597640-79597659 | Msa0575690:intron | 35.0% |
| AGGGTCTTAGAATATGGATT+GGG | + | chr4_1:79597709-79597728 | None:intergenic | 35.0% | |
| TAGGGTCTTAGAATATGGAT+TGG | + | chr4_1:79597710-79597729 | None:intergenic | 35.0% | |
| TAGGATAGGGTCTTAGAATA+TGG | + | chr4_1:79597715-79597734 | None:intergenic | 35.0% | |
| !! | CGGTTTTGTAATGATTGAGT+TGG | - | chr4_1:79597988-79598007 | Msa0575690:intron | 35.0% |
| GTTGAGATTATGTTGTGATG+AGG | - | chr4_1:79598069-79598088 | Msa0575690:intron | 35.0% | |
| ! | TAACTTTTGTAGAGCTCAGA+AGG | - | chr4_1:79598113-79598132 | Msa0575690:intron | 35.0% |
| TTGAGGAATCCTAATCAAAC+TGG | - | chr4_1:79598139-79598158 | Msa0575690:intron | 35.0% | |
| ACCAGTTTCAGCAAAGAATA+GGG | + | chr4_1:79598189-79598208 | None:intergenic | 35.0% | |
| TACCAGTTTCAGCAAAGAAT+AGG | + | chr4_1:79598190-79598209 | None:intergenic | 35.0% | |
| TTCCTCTTAAAATCTCAGCT+CGG | + | chr4_1:79598246-79598265 | None:intergenic | 35.0% | |
| !! | AGATTTTAAGAGGAAGTCTG+TGG | - | chr4_1:79598251-79598270 | Msa0575690:intron | 35.0% |
| GTTTGAACGAGAAATTCTTG+AGG | - | chr4_1:79598424-79598443 | Msa0575690:intron | 35.0% | |
| AGTTGCACAATTACAGGAAA+AGG | - | chr4_1:79598472-79598491 | Msa0575690:intron | 35.0% | |
| ! | AGAAATGTTTTCCTTAGCCA+TGG | - | chr4_1:79598859-79598878 | Msa0575690:intron | 35.0% |
| ! | ACTTTTATCATGTGTCACCT+TGG | + | chr4_1:79598890-79598909 | None:intergenic | 35.0% |
| ! | TTTGGAGCATCTAGAAAGTT+GGG | + | chr4_1:79599326-79599345 | None:intergenic | 35.0% |
| ! | ATTTGGAGCATCTAGAAAGT+TGG | + | chr4_1:79599327-79599346 | None:intergenic | 35.0% |
| AGTAAGCTATTTGACAAGTC+AGG | + | chr4_1:79599371-79599390 | None:intergenic | 35.0% | |
| !!! | AGTGTTTTGACTAAGAATGG+AGG | - | chr4_1:79599401-79599420 | Msa0575690:intron | 35.0% |
| !!! | GTGTTTTGACTAAGAATGGA+GGG | - | chr4_1:79599402-79599421 | Msa0575690:intron | 35.0% |
| !!! | TGTTTTGACTAAGAATGGAG+GGG | - | chr4_1:79599403-79599422 | Msa0575690:intron | 35.0% |
| GTGCTTTAATCAGGAATGTT+TGG | - | chr4_1:79599540-79599559 | Msa0575690:intron | 35.0% | |
| GGAATGTTTGGCAAAAAAAC+GGG | - | chr4_1:79599552-79599571 | Msa0575690:intron | 35.0% | |
| ! | GAGTAACTGTGTTTTGCATT+TGG | + | chr4_1:79599698-79599717 | None:intergenic | 35.0% |
| ACAGTTACTCAAGTACTTCA+AGG | - | chr4_1:79599708-79599727 | Msa0575690:intron | 35.0% | |
| CAGTTACTCAAGTACTTCAA+GGG | - | chr4_1:79599709-79599728 | Msa0575690:intron | 35.0% | |
| AATTCACCCAAACACGTAAT+TGG | - | chr4_1:79600427-79600446 | Msa0575690:CDS | 35.0% | |
| ATTCACCCAAACACGTAATT+GGG | - | chr4_1:79600428-79600447 | Msa0575690:CDS | 35.0% | |
| !! | TTGAGGTATGCTTTTTACCA+AGG | - | chr4_1:79600542-79600561 | Msa0575690:CDS | 35.0% |
| !! | ATTTTTACGATTGACTCAGC+AGG | - | chr4_1:79600621-79600640 | Msa0575690:CDS | 35.0% |
| !! | TTCTAAGTCACTTGATGATG+AGG | + | chr4_1:79600707-79600726 | None:intergenic | 35.0% |
| TCATCAAGTGACTTAGAATC+TGG | - | chr4_1:79600709-79600728 | Msa0575690:CDS | 35.0% | |
| TGACTTAGAATCTGGATTGT+GGG | - | chr4_1:79600717-79600736 | Msa0575690:CDS | 35.0% | |
| ATAAAAGCCAGAATTCACTC+TGG | - | chr4_1:79600769-79600788 | Msa0575690:CDS | 35.0% | |
| TATGTTCTCCAATGAGATCA+CGG | + | chr4_1:79600977-79600996 | None:intergenic | 35.0% | |
| ACTGGAGTATGATTGTGTTA+TGG | - | chr4_1:79601003-79601022 | Msa0575690:CDS | 35.0% | |
| GCCTTCAATGAAAATATAGC+AGG | + | chr4_1:79601268-79601287 | None:intergenic | 35.0% | |
| ATGCTGCTCATATGATGATA+AGG | - | chr4_1:79601310-79601329 | Msa0575690:CDS | 35.0% | |
| TGCTGCTCATATGATGATAA+GGG | - | chr4_1:79601311-79601330 | Msa0575690:CDS | 35.0% | |
| CAAATCAAACCATGGCGAAT+TGG | - | chr4_1:79593893-79593912 | Msa0575690:three_prime_UTR | 40.0% | |
| ATTGATGGAAAATGGACGGA+CGG | + | chr4_1:79593967-79593986 | None:intergenic | 40.0% | |
| GTAGGAGGGTTAGATGATTT+GGG | + | chr4_1:79594279-79594298 | None:intergenic | 40.0% | |
| CAGAGGTTAGACTCTCTTAA+AGG | - | chr4_1:79594462-79594481 | Msa0575690:CDS | 40.0% | |
| !! | AGGAGAAAATGATGATGGCA+AGG | - | chr4_1:79594482-79594501 | Msa0575690:CDS | 40.0% |
| TACATTAGACTGCCTATCAG+TGG | + | chr4_1:79594529-79594548 | None:intergenic | 40.0% | |
| ! | GGTGGATTTAGCATCAGTTT+CGG | + | chr4_1:79594556-79594575 | None:intergenic | 40.0% |
| TTGAGACCAAGGTAGATCAT+GGG | - | chr4_1:79594625-79594644 | Msa0575690:CDS | 40.0% | |
| ACAGAAAGGCAATACCAGTA+AGG | - | chr4_1:79594685-79594704 | Msa0575690:CDS | 40.0% | |
| CAGAAAGGCAATACCAGTAA+GGG | - | chr4_1:79594686-79594705 | Msa0575690:CDS | 40.0% | |
| AGAAAGGCAATACCAGTAAG+GGG | - | chr4_1:79594687-79594706 | Msa0575690:CDS | 40.0% | |
| TGAATCAGAACTTCCATCAC+TGG | + | chr4_1:79594850-79594869 | None:intergenic | 40.0% | |
| AGCTAAACAACAAGCACAAG+AGG | - | chr4_1:79595058-79595077 | Msa0575690:intron | 40.0% | |
| ! | TTATACTGGTTATGCTCAGC+AGG | - | chr4_1:79595137-79595156 | Msa0575690:intron | 40.0% |
| ! | ACGGTCTAGATCACTGTTTT+GGG | - | chr4_1:79595318-79595337 | Msa0575690:CDS | 40.0% |
| ! | ACCTGATCTTTTTGACGTGT+TGG | - | chr4_1:79595345-79595364 | Msa0575690:intron | 40.0% |
| ACCAACACGTCAAAAAGATC+AGG | + | chr4_1:79595349-79595368 | None:intergenic | 40.0% | |
| ! | GAGCACTATGATGGAAACAA+TGG | - | chr4_1:79595417-79595436 | Msa0575690:intron | 40.0% |
| AACAATGGAAGCTGTTGAGT+TGG | - | chr4_1:79595432-79595451 | Msa0575690:intron | 40.0% | |
| TACACGTTTAGCTAAACTGG+AGG | - | chr4_1:79595492-79595511 | Msa0575690:intron | 40.0% | |
| TATGAATCGTGAGAAGTGGA+TGG | + | chr4_1:79595743-79595762 | None:intergenic | 40.0% | |
| GCGACATAATATGACCAAAC+TGG | - | chr4_1:79595903-79595922 | Msa0575690:intron | 40.0% | |
| CAGATATGAGGATGACACAA+GGG | + | chr4_1:79596144-79596163 | None:intergenic | 40.0% | |
| CTTGTGTCATCCTCATATCT+GGG | - | chr4_1:79596143-79596162 | Msa0575690:intron | 40.0% | |
| ACTACTCTTACCCAGATATG+AGG | + | chr4_1:79596156-79596175 | None:intergenic | 40.0% | |
| CTGTGTCAAGTATTATGGGA+CGG | + | chr4_1:79596462-79596481 | None:intergenic | 40.0% | |
| !! | AAGGTTGGTATAGGCCTATA+AGG | - | chr4_1:79596970-79596989 | Msa0575690:CDS | 40.0% |
| ! | TAGGCTTCTATGGGTTTTTC+AGG | - | chr4_1:79597127-79597146 | Msa0575690:intron | 40.0% |
| GGAGCCACATTATTCGAATT+TGG | - | chr4_1:79597148-79597167 | Msa0575690:intron | 40.0% | |
| ! | AGGATTGCTCGAGTTTTACA+TGG | - | chr4_1:79597210-79597229 | Msa0575690:intron | 40.0% |
| ! | ACATGGACTACTTTGACCTT+TGG | - | chr4_1:79597227-79597246 | Msa0575690:intron | 40.0% |
| ! | CATGGACTACTTTGACCTTT+GGG | - | chr4_1:79597228-79597247 | Msa0575690:intron | 40.0% |
| AGCATCTTCGTGCTCATTAA+GGG | + | chr4_1:79597266-79597285 | None:intergenic | 40.0% | |
| CCCAATAACAAATCCAGAAC+AGG | - | chr4_1:79597292-79597311 | Msa0575690:intron | 40.0% | |
| !! | GCCTGTTCTGGATTTGTTAT+TGG | + | chr4_1:79597296-79597315 | None:intergenic | 40.0% |
| CTTAGAATATCCTCACCTCT+TGG | + | chr4_1:79597367-79597386 | None:intergenic | 40.0% | |
| !! | AGAATATCCTTGACTTGGCA+AGG | - | chr4_1:79597423-79597442 | Msa0575690:intron | 40.0% |
| AAGCAAAACTACCATGGTTC+AGG | + | chr4_1:79597477-79597496 | None:intergenic | 40.0% | |
| CACCACTTATAAGCAACACT+TGG | + | chr4_1:79597641-79597660 | None:intergenic | 40.0% | |
| !! | CAAGTGTTGCTTATAAGTGG+TGG | - | chr4_1:79597639-79597658 | Msa0575690:intron | 40.0% |
| !! | CATTACAAAACCGGCTTGTA+AGG | + | chr4_1:79597675-79597694 | None:intergenic | 40.0% |
| !! | CTTACAAGCCGGTTTTGTAA+TGG | - | chr4_1:79597673-79597692 | Msa0575690:intron | 40.0% |
| ! | CTAACAGCAGATCTAGGATA+GGG | + | chr4_1:79597728-79597747 | None:intergenic | 40.0% |
| TGGAAATTCCGCCTTAATTG+CGG | - | chr4_1:79597807-79597826 | Msa0575690:intron | 40.0% | |
| ACCCTATTCTTTGCTGAAAC+TGG | - | chr4_1:79598185-79598204 | Msa0575690:intron | 40.0% | |
| TCCTCTTAAAATCTCAGCTC+GGG | + | chr4_1:79598245-79598264 | None:intergenic | 40.0% | |
| ! | ATGCTGTAGCTAGCTTCAAA+AGG | - | chr4_1:79598395-79598414 | Msa0575690:intron | 40.0% |
| ATACTCTTGTGTGTCCGTTA+TGG | - | chr4_1:79598504-79598523 | Msa0575690:intron | 40.0% | |
| AATGGACAATGGTTCTTCAC+TGG | + | chr4_1:79598919-79598938 | None:intergenic | 40.0% | |
| AGGTAAACAATGCACAGTCA+AGG | - | chr4_1:79599090-79599109 | Msa0575690:intron | 40.0% | |
| AGAGATTCTTGCCAAATCTG+AGG | - | chr4_1:79599132-79599151 | Msa0575690:intron | 40.0% | |
| TTCACAAAGCTTCAAGAGTG+AGG | + | chr4_1:79599222-79599241 | None:intergenic | 40.0% | |
| TTTACTTGAGCATGAACTGC+AGG | - | chr4_1:79599447-79599466 | Msa0575690:intron | 40.0% | |
| AGTGAACTGTATCCAGCAAA+GGG | - | chr4_1:79599499-79599518 | Msa0575690:intron | 40.0% | |
| AAGCTTCAATTTCCCTTTGC+TGG | + | chr4_1:79599514-79599533 | None:intergenic | 40.0% | |
| ! | AAGGGAAATTGAAGCTTGCT+AGG | - | chr4_1:79599517-79599536 | Msa0575690:intron | 40.0% |
| !! | AGGGAAATTGAAGCTTGCTA+GGG | - | chr4_1:79599518-79599537 | Msa0575690:intron | 40.0% |
| AAACAGCCTAGAAATTCAGC+TGG | - | chr4_1:79599589-79599608 | Msa0575690:intron | 40.0% | |
| CTTTCACCAGCTGAATTTCT+AGG | + | chr4_1:79599598-79599617 | None:intergenic | 40.0% | |
| TACATTTGTAAACAGCTCCG+CGG | + | chr4_1:79599664-79599683 | None:intergenic | 40.0% | |
| CACATTCAGTTAAGGTCAAG+CGG | + | chr4_1:79599771-79599790 | None:intergenic | 40.0% | |
| TTAATACAGCTGCACATCAC+AGG | - | chr4_1:79600050-79600069 | Msa0575690:intron | 40.0% | |
| TTGAAGTTGAGCTCAAGTGT+AGG | - | chr4_1:79600133-79600152 | Msa0575690:intron | 40.0% | |
| CAAGTCCCAATTACGTGTTT+GGG | + | chr4_1:79600436-79600455 | None:intergenic | 40.0% | |
| TGAATCACTCTCATCTGAGA+AGG | - | chr4_1:79600501-79600520 | Msa0575690:CDS | 40.0% | |
| GTGACTTAGAATCTGGATTG+TGG | - | chr4_1:79600716-79600735 | Msa0575690:CDS | 40.0% | |
| TTTCTTGCCAGAGTGAATTC+TGG | + | chr4_1:79600779-79600798 | None:intergenic | 40.0% | |
| !! | CTGGTGCAGTTTTTCTGAAA+AGG | - | chr4_1:79600842-79600861 | Msa0575690:CDS | 40.0% |
| GAACTCAACGGCAAAATTGT+GGG | - | chr4_1:79600864-79600883 | Msa0575690:CDS | 40.0% | |
| ! | ACCTTGTTTGCCTTCATTTG+TGG | - | chr4_1:79600896-79600915 | Msa0575690:CDS | 40.0% |
| ! | CCTTGTTTGCCTTCATTTGT+GGG | - | chr4_1:79600897-79600916 | Msa0575690:CDS | 40.0% |
| TATGTGTGCTTGATGTACAC+CGG | + | chr4_1:79601087-79601106 | None:intergenic | 40.0% | |
| TGTACATCAAGCACACATAG+TGG | - | chr4_1:79601088-79601107 | Msa0575690:CDS | 40.0% | |
| TGCCTGATGGAGAATGTTCT+CGG | + | chr4_1:79593941-79593960 | None:intergenic | 45.0% | |
| GGTTCAGATCGATCAACAAG+CGG | - | chr4_1:79594044-79594063 | Msa0575690:three_prime_UTR | 45.0% | |
| CAACGAGAGGCTTCAATTAG+AGG | - | chr4_1:79594086-79594105 | Msa0575690:three_prime_UTR | 45.0% | |
| GGTAGGAGGGTTAGATGATT+TGG | + | chr4_1:79594280-79594299 | None:intergenic | 45.0% | |
| AACCCTCCTACCATTACAGA+CGG | - | chr4_1:79594288-79594307 | Msa0575690:three_prime_UTR | 45.0% | |
| CAATCACCGTCTGTAATGGT+AGG | + | chr4_1:79594297-79594316 | None:intergenic | 45.0% | |
| CTACCATTACAGACGGTGAT+TGG | - | chr4_1:79594295-79594314 | Msa0575690:three_prime_UTR | 45.0% | |
| AGTCCAATCACCGTCTGTAA+TGG | + | chr4_1:79594301-79594320 | None:intergenic | 45.0% | |
| ! | TGCCTGCACCTCGTATTTTA+AGG | - | chr4_1:79594355-79594374 | Msa0575690:three_prime_UTR | 45.0% |
| TGCCTTAAAATACGAGGTGC+AGG | + | chr4_1:79594360-79594379 | None:intergenic | 45.0% | |
| CCTCTGCAAAGATGTTGAAC+TGG | + | chr4_1:79594448-79594467 | None:intergenic | 45.0% | |
| CCAGTTCAACATCTTTGCAG+AGG | - | chr4_1:79594445-79594464 | Msa0575690:CDS | 45.0% | |
| ACTGATGCTAAATCCACCAG+AGG | - | chr4_1:79594558-79594577 | Msa0575690:CDS | 45.0% | |
| ACTAACAGATTCCTGTCCTC+TGG | + | chr4_1:79594577-79594596 | None:intergenic | 45.0% | |
| CACTTCTGATAAACCACCTG+TGG | - | chr4_1:79594602-79594621 | Msa0575690:CDS | 45.0% | |
| GTTGAGACCAAGGTAGATCA+TGG | - | chr4_1:79594624-79594643 | Msa0575690:CDS | 45.0% | |
| ACCAGAATTACTGCTGGAAG+AGG | - | chr4_1:79594662-79594681 | Msa0575690:CDS | 45.0% | |
| TCCTCTTCCAGCAGTAATTC+TGG | + | chr4_1:79594666-79594685 | None:intergenic | 45.0% | |
| GAAAGGCAATACCAGTAAGG+GGG | - | chr4_1:79594688-79594707 | Msa0575690:CDS | 45.0% | |
| AAAGGCAATACCAGTAAGGG+GGG | - | chr4_1:79594689-79594708 | Msa0575690:CDS | 45.0% | |
| ACTTTATCAACCCCCCTTAC+TGG | + | chr4_1:79594702-79594721 | None:intergenic | 45.0% | |
| GTTGACTGCCAACATCTACA+GGG | + | chr4_1:79594740-79594759 | None:intergenic | 45.0% | |
| AGTTGACTGCCAACATCTAC+AGG | + | chr4_1:79594741-79594760 | None:intergenic | 45.0% | |
| TCTGATTCAGATACGGACTC+TGG | - | chr4_1:79594861-79594880 | Msa0575690:intron | 45.0% | |
| GTGAACATGAGAGGGAAGAA+AGG | - | chr4_1:79594904-79594923 | Msa0575690:CDS | 45.0% | |
| ! | CTCAGCAGGATGTTTTGTGT+AGG | - | chr4_1:79595151-79595170 | Msa0575690:intron | 45.0% |
| ! | CACGGTCTAGATCACTGTTT+TGG | - | chr4_1:79595317-79595336 | Msa0575690:CDS | 45.0% |
| ACAGTGGAACCTTGAAGTAG+AGG | - | chr4_1:79595693-79595712 | Msa0575690:intron | 45.0% | |
| ATGAGGATGACACAAGGGTT+TGG | + | chr4_1:79596139-79596158 | None:intergenic | 45.0% | |
| CCAGATATGAGGATGACACA+AGG | + | chr4_1:79596145-79596164 | None:intergenic | 45.0% | |
| CCTTGTGTCATCCTCATATC+TGG | - | chr4_1:79596142-79596161 | Msa0575690:intron | 45.0% | |
| GTCAAGTATTATGGGACGGA+GGG | + | chr4_1:79596458-79596477 | None:intergenic | 45.0% | |
| TGTCAAGTATTATGGGACGG+AGG | + | chr4_1:79596459-79596478 | None:intergenic | 45.0% | |
| ATTGGTCATCTATTGCGGGA+CGG | - | chr4_1:79596682-79596701 | Msa0575690:intron | 45.0% | |
| ATAGGACTCATTAGCTGCCA+TGG | - | chr4_1:79596869-79596888 | Msa0575690:intron | 45.0% | |
| !!! | ACCATACGAGCTAGCTTTTG+GGG | + | chr4_1:79597189-79597208 | None:intergenic | 45.0% |
| !!! | CACCATACGAGCTAGCTTTT+GGG | + | chr4_1:79597190-79597209 | None:intergenic | 45.0% |
| !!! | TCACCATACGAGCTAGCTTT+TGG | + | chr4_1:79597191-79597210 | None:intergenic | 45.0% |
| AAAAGCTAGCTCGTATGGTG+AGG | - | chr4_1:79597190-79597209 | Msa0575690:intron | 45.0% | |
| GCATCTTCGTGCTCATTAAG+GGG | + | chr4_1:79597265-79597284 | None:intergenic | 45.0% | |
| CAGCATCTTCGTGCTCATTA+AGG | + | chr4_1:79597267-79597286 | None:intergenic | 45.0% | |
| CTTAATGAGCACGAAGATGC+TGG | - | chr4_1:79597265-79597284 | Msa0575690:CDS | 45.0% | |
| !!! | TCCTTGACTTGGCAAGGTTT+TGG | - | chr4_1:79597429-79597448 | Msa0575690:intron | 45.0% |
| TCCAAAACCTTGCCAAGTCA+AGG | + | chr4_1:79597433-79597452 | None:intergenic | 45.0% | |
| CTTCTCTAGATCCTGAACCA+TGG | - | chr4_1:79597463-79597482 | Msa0575690:intron | 45.0% | |
| TTCGCCTTAATTGCGGCATT+TGG | - | chr4_1:79597545-79597564 | Msa0575690:intron | 45.0% | |
| CAGTCCAAATGCCGCAATTA+AGG | + | chr4_1:79597552-79597571 | None:intergenic | 45.0% | |
| TAAGCAACACTTGGCGATGT+GGG | + | chr4_1:79597632-79597651 | None:intergenic | 45.0% | |
| ATAAGCAACACTTGGCGATG+TGG | + | chr4_1:79597633-79597652 | None:intergenic | 45.0% | |
| !! | CGCCAAGTGTTGCTTATAAG+TGG | - | chr4_1:79597636-79597655 | Msa0575690:intron | 45.0% |
| ! | CCTAACAGCAGATCTAGGAT+AGG | + | chr4_1:79597729-79597748 | None:intergenic | 45.0% |
| CCTATCCTAGATCTGCTGTT+AGG | - | chr4_1:79597726-79597745 | Msa0575690:intron | 45.0% | |
| GGCAAATCTCTACGCAATGT+GGG | + | chr4_1:79597926-79597945 | None:intergenic | 45.0% | |
| TGGCAAATCTCTACGCAATG+TGG | + | chr4_1:79597927-79597946 | None:intergenic | 45.0% | |
| CGTGAAGCTCCAGTTTGATT+AGG | + | chr4_1:79598151-79598170 | None:intergenic | 45.0% | |
| ! | TCCCGAGCTGAGATTTTAAG+AGG | - | chr4_1:79598241-79598260 | Msa0575690:intron | 45.0% |
| GACTGTGCATTGTTTACCTC+TGG | + | chr4_1:79599089-79599108 | None:intergenic | 45.0% | |
| GCAAGAATCTCTTTCAACCC+GGG | + | chr4_1:79599124-79599143 | None:intergenic | 45.0% | |
| GGCAAGAATCTCTTTCAACC+CGG | + | chr4_1:79599125-79599144 | None:intergenic | 45.0% | |
| ! | GCGGATCTTTTCCTCAGATT+TGG | + | chr4_1:79599146-79599165 | None:intergenic | 45.0% |
| TGCTGGATACAGTTCACTCT+TGG | + | chr4_1:79599497-79599516 | None:intergenic | 45.0% | |
| GAGTGAACTGTATCCAGCAA+AGG | - | chr4_1:79599498-79599517 | Msa0575690:intron | 45.0% | |
| ! | CTTGCTAGGGTGCTTTAATC+AGG | - | chr4_1:79599531-79599550 | Msa0575690:intron | 45.0% |
| ACTCAAGTACTTCAAGGGTG+AGG | - | chr4_1:79599714-79599733 | Msa0575690:CDS | 45.0% | |
| CAGACTCTGAATCTAATGCC+TGG | - | chr4_1:79599895-79599914 | Msa0575690:intron | 45.0% | |
| GAAGGAGATAGAAGAGCCAA+CGG | - | chr4_1:79600107-79600126 | Msa0575690:intron | 45.0% | |
| AGCTCAACTTCAACTTCCGT+TGG | + | chr4_1:79600126-79600145 | None:intergenic | 45.0% | |
| GCAAGTCCCAATTACGTGTT+TGG | + | chr4_1:79600437-79600456 | None:intergenic | 45.0% | |
| ! | ACGTAATTGGGACTTGCTTC+AGG | - | chr4_1:79600440-79600459 | Msa0575690:CDS | 45.0% |
| !! | AAGTCACTTGATGATGAGGC+AGG | + | chr4_1:79600703-79600722 | None:intergenic | 45.0% |
| GGAACTCAACGGCAAAATTG+TGG | - | chr4_1:79600863-79600882 | Msa0575690:CDS | 45.0% | |
| CCCACAAATGAAGGCAAACA+AGG | + | chr4_1:79600900-79600919 | None:intergenic | 45.0% | |
| GATGTCACATTCTAGCCCAT+CGG | - | chr4_1:79600933-79600952 | Msa0575690:CDS | 45.0% | |
| GTCGAACTTAACTCGAGAAC+AGG | - | chr4_1:79601221-79601240 | Msa0575690:CDS | 45.0% | |
| GAACAGGTACTCCATCATAG+AGG | - | chr4_1:79601237-79601256 | Msa0575690:CDS | 45.0% | |
| AGCAGGACATTCCTCTATGA+TGG | + | chr4_1:79601251-79601270 | None:intergenic | 45.0% | |
| TCTCTAGTCAGTAGCTTGGA+GGG | - | chr4_1:79601391-79601410 | Msa0575690:intron | 45.0% | |
| !!! | TGAGTGCACTGTTTTGACCT+TGG | - | chr4_1:79601426-79601445 | Msa0575690:intron | 45.0% |
| !!! | TTTTATTTTTTTGATTTTAA+CGG | - | chr4_1:79594023-79594042 | Msa0575690:three_prime_UTR | 5.0% |
| GGAAGAGATCCAATTCGCCA+TGG | + | chr4_1:79593905-79593924 | None:intergenic | 50.0% | |
| !! | GTTCTCGGCGGCTTTAAGTT+TGG | + | chr4_1:79593926-79593945 | None:intergenic | 50.0% |
| CTGATGGAGAATGTTCTCGG+CGG | + | chr4_1:79593938-79593957 | None:intergenic | 50.0% | |
| CGCTTCGTAAGAACAACGAG+AGG | - | chr4_1:79594073-79594092 | Msa0575690:three_prime_UTR | 50.0% | |
| ! | GGGAGGTGCATCAATACTAC+TGG | + | chr4_1:79594118-79594137 | None:intergenic | 50.0% |
| ATTGATGCACCTCCCAAACC+AGG | - | chr4_1:79594123-79594142 | Msa0575690:three_prime_UTR | 50.0% | |
| CACCGTCTGTAATGGTAGGA+GGG | + | chr4_1:79594293-79594312 | None:intergenic | 50.0% | |
| TCACCGTCTGTAATGGTAGG+AGG | + | chr4_1:79594294-79594313 | None:intergenic | 50.0% | |
| CTTCTTCCGCTTCCACTGAT+AGG | - | chr4_1:79594514-79594533 | Msa0575690:CDS | 50.0% | |
| AGACTGCCTATCAGTGGAAG+CGG | + | chr4_1:79594523-79594542 | None:intergenic | 50.0% | |
| TGCTAAATCCACCAGAGGAC+AGG | - | chr4_1:79594563-79594582 | Msa0575690:CDS | 50.0% | |
| AACAGATTCCTGTCCTCTGG+TGG | + | chr4_1:79594574-79594593 | None:intergenic | 50.0% | |
| TCTACCTTGGTCTCAACCAC+AGG | + | chr4_1:79594621-79594640 | None:intergenic | 50.0% | |
| ACTGCTGGAAGAGGACAGAA+AGG | - | chr4_1:79594671-79594690 | Msa0575690:CDS | 50.0% | |
| GCCAAGTTCCCTGTAGATGT+TGG | - | chr4_1:79594729-79594748 | Msa0575690:CDS | 50.0% | |
| GCCAACATCTACAGGGAACT+TGG | + | chr4_1:79594733-79594752 | None:intergenic | 50.0% | |
| GGTTCTTCTATGGCCAGTGA+TGG | - | chr4_1:79594834-79594853 | Msa0575690:intron | 50.0% | |
| ! | GCAGCTTCAGAGCACTATGA+TGG | - | chr4_1:79595408-79595427 | Msa0575690:intron | 50.0% |
| ! | CAGAGTGTCAGAGTTGACGA+TGG | + | chr4_1:79595976-79595995 | None:intergenic | 50.0% |
| CATCGTCAACTCTGACACTC+TGG | - | chr4_1:79595974-79595993 | Msa0575690:intron | 50.0% | |
| !!! | AGCTAGCTTTTGGGGTGAGT+TGG | + | chr4_1:79597181-79597200 | None:intergenic | 50.0% |
| ACCCCAAAAGCTAGCTCGTA+TGG | - | chr4_1:79597185-79597204 | Msa0575690:intron | 50.0% | |
| AATATCCTCACCTCTTGGGC+TGG | + | chr4_1:79597362-79597381 | None:intergenic | 50.0% | |
| TCCAACACGTCCGTTATGCT+GGG | - | chr4_1:79597586-79597605 | Msa0575690:intron | 50.0% | |
| GTATCTGTCGCCTTACAAGC+CGG | - | chr4_1:79597662-79597681 | Msa0575690:intron | 50.0% | |
| GGAAGCCTAACAGCAGATCT+AGG | + | chr4_1:79597734-79597753 | None:intergenic | 50.0% | |
| CTAGGGGCTAACCGCAATTA+AGG | + | chr4_1:79597821-79597840 | None:intergenic | 50.0% | |
| ! | GGTGCTGAAGGCTACAATGA+AGG | + | chr4_1:79597869-79597888 | None:intergenic | 50.0% |
| TTCAGCACCTCCGTTGTGTT+GGG | - | chr4_1:79597880-79597899 | Msa0575690:intron | 50.0% | |
| TAGAGCTCAGAAGGAGCTTG+AGG | - | chr4_1:79598122-79598141 | Msa0575690:intron | 50.0% | |
| GTCAGATTGAGGCAGACTTG+GGG | + | chr4_1:79599062-79599081 | None:intergenic | 50.0% | |
| CGTCAGATTGAGGCAGACTT+GGG | + | chr4_1:79599063-79599082 | None:intergenic | 50.0% | |
| CCAAGTCTGCCTCAATCTGA+CGG | - | chr4_1:79599061-79599080 | Msa0575690:intron | 50.0% | |
| ACAGTCAAGGATGTCATGCC+CGG | - | chr4_1:79599103-79599122 | Msa0575690:intron | 50.0% | |
| TGGAGGGGACACATTAGTAG+AGG | - | chr4_1:79599418-79599437 | Msa0575690:intron | 50.0% | |
| ! | CTAGAGCGAGGTACCATGAT+AGG | + | chr4_1:79599742-79599761 | None:intergenic | 50.0% |
| ! | AAGCGGTTAAGTCTAGAGCG+AGG | + | chr4_1:79599754-79599773 | None:intergenic | 50.0% |
| CACATCACAGGCAAGGAAAC+TGG | - | chr4_1:79600062-79600081 | Msa0575690:intron | 50.0% | |
| CTTCGTAAGACTGACCAGAC+TGG | + | chr4_1:79600281-79600300 | None:intergenic | 50.0% | |
| GACGAGAACATGTCAGTCTC+AGG | - | chr4_1:79600661-79600680 | Msa0575690:CDS | 50.0% | |
| TCACTCTGGCAAGAAACAGC+TGG | - | chr4_1:79600783-79600802 | Msa0575690:CDS | 50.0% | |
| CACTCTGGCAAGAAACAGCT+GGG | - | chr4_1:79600784-79600803 | Msa0575690:CDS | 50.0% | |
| ACTCTGGCAAGAAACAGCTG+GGG | - | chr4_1:79600785-79600804 | Msa0575690:CDS | 50.0% | |
| ACATTCTAGCCCATCGGATG+AGG | - | chr4_1:79600939-79600958 | Msa0575690:CDS | 50.0% | |
| CATTCTAGCCCATCGGATGA+GGG | - | chr4_1:79600940-79600959 | Msa0575690:CDS | 50.0% | |
| CAGATCTACCCTCATCCGAT+GGG | + | chr4_1:79600951-79600970 | None:intergenic | 50.0% | |
| !! | ATCTGGTGCCGTGATCTCAT+TGG | - | chr4_1:79600966-79600985 | Msa0575690:CDS | 50.0% |
| GACTAGAGAGGCTCATTCTG+TGG | + | chr4_1:79601380-79601399 | None:intergenic | 50.0% | |
| AGCCTCTCTAGTCAGTAGCT+TGG | - | chr4_1:79601387-79601406 | Msa0575690:intron | 50.0% | |
| ! | CTCCAAGCTACTGACTAGAG+AGG | + | chr4_1:79601392-79601411 | None:intergenic | 50.0% |
| CTCTCTAGTCAGTAGCTTGG+AGG | - | chr4_1:79601390-79601409 | Msa0575690:intron | 50.0% | |
| TAGTCAGTAGCTTGGAGGGA+CGG | - | chr4_1:79601395-79601414 | Msa0575690:intron | 50.0% | |
| CGCCGAGAACATTCTCCATC+AGG | - | chr4_1:79593936-79593955 | Msa0575690:three_prime_UTR | 55.0% | |
| ATCCTTGAGAGGGACACCAC+CGG | + | chr4_1:79594151-79594170 | None:intergenic | 55.0% | |
| GGCACAGCGTTAGAAGCAGA+AGG | + | chr4_1:79594339-79594358 | None:intergenic | 55.0% | |
| ACCACCTGTGGTTGAGACCA+AGG | - | chr4_1:79594614-79594633 | Msa0575690:CDS | 55.0% | |
| ACCTTGGTCTCAACCACAGG+TGG | + | chr4_1:79594618-79594637 | None:intergenic | 55.0% | |
| TGGGTGCCCATGATCTACCT+TGG | + | chr4_1:79594634-79594653 | None:intergenic | 55.0% | |
| GATCCTAGCTGAGAGAGCAG+CGG | - | chr4_1:79594944-79594963 | Msa0575690:intron | 55.0% | |
| CCTGAGGGACAGGGAAAAAC+AGG | + | chr4_1:79595384-79595403 | None:intergenic | 55.0% | |
| !! | CCTGTTTTTCCCTGTCCCTC+AGG | - | chr4_1:79595381-79595400 | Msa0575690:intron | 55.0% |
| ! | TCTGAAGCTGCGAAGCCTGA+GGG | + | chr4_1:79595399-79595418 | None:intergenic | 55.0% |
| GTTCCACTGTACAGCTGCGA+GGG | + | chr4_1:79595683-79595702 | None:intergenic | 55.0% | |
| GTCATCTATTGCGGGACGGA+GGG | - | chr4_1:79596686-79596705 | Msa0575690:intron | 55.0% | |
| GGGGTGTGTTGAGATCCCAA+AGG | + | chr4_1:79597246-79597265 | None:intergenic | 55.0% | |
| !! | ACCTCTTGGGCTGGCTTATG+GGG | + | chr4_1:79597353-79597372 | None:intergenic | 55.0% |
| !! | CACCTCTTGGGCTGGCTTAT+GGG | + | chr4_1:79597354-79597373 | None:intergenic | 55.0% |
| !! | TCACCTCTTGGGCTGGCTTA+TGG | + | chr4_1:79597355-79597374 | None:intergenic | 55.0% |
| ATAAGCCAGCCCAAGAGGTG+AGG | - | chr4_1:79597354-79597373 | Msa0575690:intron | 55.0% | |
| CGTGTTGGAGGCTGCAATGA+AGG | + | chr4_1:79597575-79597594 | None:intergenic | 55.0% | |
| !! | CAGCATAACGGACGTGTTGG+AGG | + | chr4_1:79597587-79597606 | None:intergenic | 55.0% |
| CTCCAACACGTCCGTTATGC+TGG | - | chr4_1:79597585-79597604 | Msa0575690:intron | 55.0% | |
| !! | ACCCAGCATAACGGACGTGT+TGG | + | chr4_1:79597590-79597609 | None:intergenic | 55.0% |
| GTCCGTTATGCTGGGTGTGA+GGG | - | chr4_1:79597594-79597613 | Msa0575690:intron | 55.0% | |
| TCCGTTATGCTGGGTGTGAG+GGG | - | chr4_1:79597595-79597614 | Msa0575690:intron | 55.0% | |
| TGTCCACACTTCAGGCCCAT+AGG | - | chr4_1:79597759-79597778 | Msa0575690:intron | 55.0% | |
| GTCCACACTTCAGGCCCATA+GGG | - | chr4_1:79597760-79597779 | Msa0575690:intron | 55.0% | |
| GGGGCTAACCGCAATTAAGG+CGG | + | chr4_1:79597818-79597837 | None:intergenic | 55.0% | |
| TAGCCCCTAGCACCTAACTG+CGG | - | chr4_1:79597831-79597850 | Msa0575690:intron | 55.0% | |
| ATGCCGCAGTTAGGTGCTAG+GGG | + | chr4_1:79597837-79597856 | None:intergenic | 55.0% | |
| CATGCCGCAGTTAGGTGCTA+GGG | + | chr4_1:79597838-79597857 | None:intergenic | 55.0% | |
| ACATGCCGCAGTTAGGTGCT+AGG | + | chr4_1:79597839-79597858 | None:intergenic | 55.0% | |
| !! | CAACACAACGGAGGTGCTGA+AGG | + | chr4_1:79597881-79597900 | None:intergenic | 55.0% |
| CTTCAGCACCTCCGTTGTGT+TGG | - | chr4_1:79597879-79597898 | Msa0575690:intron | 55.0% | |
| CTCCGTTGTGTTGGGTGTGA+GGG | - | chr4_1:79597888-79597907 | Msa0575690:intron | 55.0% | |
| TCCGTTGTGTTGGGTGTGAG+GGG | - | chr4_1:79597889-79597908 | Msa0575690:intron | 55.0% | |
| CCTTGGACAAGCCATGGCTA+AGG | + | chr4_1:79598873-79598892 | None:intergenic | 55.0% | |
| ! | CCTTAGCCATGGCTTGTCCA+AGG | - | chr4_1:79598870-79598889 | Msa0575690:intron | 55.0% |
| GTGTCACCTTGGACAAGCCA+TGG | + | chr4_1:79598879-79598898 | None:intergenic | 55.0% | |
| CCGTCAGATTGAGGCAGACT+TGG | + | chr4_1:79599064-79599083 | None:intergenic | 55.0% | |
| CAGTCAAGGATGTCATGCCC+GGG | - | chr4_1:79599104-79599123 | Msa0575690:intron | 55.0% | |
| ATGCAGAGGATTGACGTCCG+CGG | - | chr4_1:79599644-79599663 | Msa0575690:intron | 55.0% | |
| ! | CAAGGGTGAGGCACCTATCA+TGG | - | chr4_1:79599726-79599745 | Msa0575690:CDS | 55.0% |
| ACAGCTGCACATCACAGGCA+AGG | - | chr4_1:79600055-79600074 | Msa0575690:intron | 55.0% | |
| GTAAGACTGACCAGACTGGC+TGG | + | chr4_1:79600277-79600296 | None:intergenic | 55.0% | |
| CCAGATCTACCCTCATCCGA+TGG | + | chr4_1:79600952-79600971 | None:intergenic | 55.0% | |
| CCATCGGATGAGGGTAGATC+TGG | - | chr4_1:79600949-79600968 | Msa0575690:CDS | 55.0% | |
| AGTCAGTAGCTTGGAGGGAC+GGG | - | chr4_1:79601396-79601415 | Msa0575690:intron | 55.0% | |
| ACACCACCGGCACCTGGTTT+GGG | + | chr4_1:79594138-79594157 | None:intergenic | 60.0% | |
| TTGCCGCTGCTCTCTCAGCT+AGG | + | chr4_1:79594950-79594969 | None:intergenic | 60.0% | |
| !! | CTCTGAAGCTGCGAAGCCTG+AGG | + | chr4_1:79595400-79595419 | None:intergenic | 60.0% |
| GATCCCTCGCAGCTGTACAG+TGG | - | chr4_1:79595677-79595696 | Msa0575690:intron | 60.0% | |
| GGTTCCACTGTACAGCTGCG+AGG | + | chr4_1:79595684-79595703 | None:intergenic | 60.0% | |
| GGTCATCTATTGCGGGACGG+AGG | - | chr4_1:79596685-79596704 | Msa0575690:intron | 60.0% | |
| ACCCCATAAGCCAGCCCAAG+AGG | - | chr4_1:79597349-79597368 | Msa0575690:intron | 60.0% | |
| CGTCCGTTATGCTGGGTGTG+AGG | - | chr4_1:79597593-79597612 | Msa0575690:intron | 60.0% | |
| CCCCCTCACACCCAGCATAA+CGG | + | chr4_1:79597599-79597618 | None:intergenic | 60.0% | |
| CCGTTATGCTGGGTGTGAGG+GGG | - | chr4_1:79597596-79597615 | Msa0575690:intron | 60.0% | |
| TCCCGCGTTGTCCACACTTC+AGG | - | chr4_1:79597751-79597770 | Msa0575690:intron | 60.0% | |
| GCCTGAAGTGTGGACAACGC+GGG | + | chr4_1:79597755-79597774 | None:intergenic | 60.0% | |
| GGCCTGAAGTGTGGACAACG+CGG | + | chr4_1:79597756-79597775 | None:intergenic | 60.0% | |
| GACCCTATGGGCCTGAAGTG+TGG | + | chr4_1:79597765-79597784 | None:intergenic | 60.0% | |
| CCAGCTCACATGCCGCAGTT+AGG | + | chr4_1:79597846-79597865 | None:intergenic | 60.0% | |
| CCTAACTGCGGCATGTGAGC+TGG | - | chr4_1:79597843-79597862 | Msa0575690:intron | 60.0% | |
| CCTCACACCCAACACAACGG+AGG | + | chr4_1:79597890-79597909 | None:intergenic | 60.0% | |
| CCTCCGTTGTGTTGGGTGTG+AGG | - | chr4_1:79597887-79597906 | Msa0575690:intron | 60.0% | |
| CCCCCTCACACCCAACACAA+CGG | + | chr4_1:79597893-79597912 | None:intergenic | 60.0% | |
| CCGTTGTGTTGGGTGTGAGG+GGG | - | chr4_1:79597890-79597909 | Msa0575690:intron | 60.0% | |
| TTGTGTTGGGTGTGAGGGGG+TGG | - | chr4_1:79597893-79597912 | Msa0575690:intron | 60.0% | |
| TGTGTTGGGTGTGAGGGGGT+GGG | - | chr4_1:79597894-79597913 | Msa0575690:intron | 60.0% | |
| CCTCTGGCACCGTCAGATTG+AGG | + | chr4_1:79599073-79599092 | None:intergenic | 60.0% | |
| ! | CCTCAATCTGACGGTGCCAG+AGG | - | chr4_1:79599070-79599089 | Msa0575690:intron | 60.0% |
| TCAGGCTTGACCAGCCAGTC+TGG | - | chr4_1:79600264-79600283 | Msa0575690:intron | 60.0% | |
| TGACTCAGCAGGCAGTGTCG+AGG | - | chr4_1:79600632-79600651 | Msa0575690:CDS | 60.0% | |
| ! | GGACGGACGGACTTGCCTGA+TGG | + | chr4_1:79593954-79593973 | None:intergenic | 65.0% |
| GCACCTCCCAAACCAGGTGC+CGG | - | chr4_1:79594129-79594148 | Msa0575690:three_prime_UTR | 65.0% | |
| GACACCACCGGCACCTGGTT+TGG | + | chr4_1:79594139-79594158 | None:intergenic | 65.0% | |
| TGCCGGTGGTGTCCCTCTCA+AGG | - | chr4_1:79594146-79594165 | Msa0575690:three_prime_UTR | 65.0% | |
| GCTGCGAAGCCTGAGGGACA+GGG | + | chr4_1:79595393-79595412 | None:intergenic | 65.0% | |
| AGCTGCGAAGCCTGAGGGAC+AGG | + | chr4_1:79595394-79595413 | None:intergenic | 65.0% | |
| ! | GCAGGCAGTGTCGAGGTTGC+TGG | - | chr4_1:79600639-79600658 | Msa0575690:CDS | 65.0% |
| !! | CCACCGGCACCTGGTTTGGG+AGG | + | chr4_1:79594135-79594154 | None:intergenic | 70.0% |
| !! | CCTCCCAAACCAGGTGCCGG+TGG | - | chr4_1:79594132-79594151 | Msa0575690:three_prime_UTR | 70.0% |
| AGAGGGACACCACCGGCACC+TGG | + | chr4_1:79594144-79594163 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 79593792 | 79601634 | 79593792 | ID=Msa0575690;Name=Msa0575690 |
| chr4_1 | mRNA | 79593792 | 79601634 | 79593792 | ID=Msa0575690-mRNA-1;Parent=Msa0575690;Name=Msa0575690-mRNA-1;_AED=0.08;_eAED=0.08;_QI=112|0.8|0.90|0.90|1|1|11|620|693 |
| chr4_1 | exon | 79593792 | 79594783 | 79593792 | ID=Msa0575690-mRNA-1:exon:28437;Parent=Msa0575690-mRNA-1 |
| chr4_1 | exon | 79594880 | 79594927 | 79594880 | ID=Msa0575690-mRNA-1:exon:28436;Parent=Msa0575690-mRNA-1 |
| chr4_1 | exon | 79595229 | 79595354 | 79595229 | ID=Msa0575690-mRNA-1:exon:28435;Parent=Msa0575690-mRNA-1 |
| chr4_1 | exon | 79595696 | 79595776 | 79595696 | ID=Msa0575690-mRNA-1:exon:28434;Parent=Msa0575690-mRNA-1 |
| chr4_1 | exon | 79596933 | 79597022 | 79596933 | ID=Msa0575690-mRNA-1:exon:28433;Parent=Msa0575690-mRNA-1 |
| chr4_1 | exon | 79597249 | 79597301 | 79597249 | ID=Msa0575690-mRNA-1:exon:28432;Parent=Msa0575690-mRNA-1 |
| chr4_1 | exon | 79599156 | 79599213 | 79599156 | ID=Msa0575690-mRNA-1:exon:28431;Parent=Msa0575690-mRNA-1 |
| chr4_1 | exon | 79599712 | 79599771 | 79599712 | ID=Msa0575690-mRNA-1:exon:28430;Parent=Msa0575690-mRNA-1 |
| chr4_1 | exon | 79599913 | 79600023 | 79599913 | ID=Msa0575690-mRNA-1:exon:28429;Parent=Msa0575690-mRNA-1 |
| chr4_1 | exon | 79600347 | 79601375 | 79600347 | ID=Msa0575690-mRNA-1:exon:28428;Parent=Msa0575690-mRNA-1 |
| chr4_1 | exon | 79601469 | 79601634 | 79601469 | ID=Msa0575690-mRNA-1:exon:28427;Parent=Msa0575690-mRNA-1 |
| chr4_1 | five_prime_UTR | 79601523 | 79601634 | 79601523 | ID=Msa0575690-mRNA-1:five_prime_utr;Parent=Msa0575690-mRNA-1 |
| chr4_1 | CDS | 79601469 | 79601522 | 79601469 | ID=Msa0575690-mRNA-1:cds;Parent=Msa0575690-mRNA-1 |
| chr4_1 | CDS | 79600347 | 79601375 | 79600347 | ID=Msa0575690-mRNA-1:cds;Parent=Msa0575690-mRNA-1 |
| chr4_1 | CDS | 79599913 | 79600023 | 79599913 | ID=Msa0575690-mRNA-1:cds;Parent=Msa0575690-mRNA-1 |
| chr4_1 | CDS | 79599712 | 79599771 | 79599712 | ID=Msa0575690-mRNA-1:cds;Parent=Msa0575690-mRNA-1 |
| chr4_1 | CDS | 79599156 | 79599213 | 79599156 | ID=Msa0575690-mRNA-1:cds;Parent=Msa0575690-mRNA-1 |
| chr4_1 | CDS | 79597249 | 79597301 | 79597249 | ID=Msa0575690-mRNA-1:cds;Parent=Msa0575690-mRNA-1 |
| chr4_1 | CDS | 79596933 | 79597022 | 79596933 | ID=Msa0575690-mRNA-1:cds;Parent=Msa0575690-mRNA-1 |
| chr4_1 | CDS | 79595696 | 79595776 | 79595696 | ID=Msa0575690-mRNA-1:cds;Parent=Msa0575690-mRNA-1 |
| chr4_1 | CDS | 79595229 | 79595354 | 79595229 | ID=Msa0575690-mRNA-1:cds;Parent=Msa0575690-mRNA-1 |
| chr4_1 | CDS | 79594880 | 79594927 | 79594880 | ID=Msa0575690-mRNA-1:cds;Parent=Msa0575690-mRNA-1 |
| chr4_1 | CDS | 79594412 | 79594783 | 79594412 | ID=Msa0575690-mRNA-1:cds;Parent=Msa0575690-mRNA-1 |
| chr4_1 | three_prime_UTR | 79593792 | 79594411 | 79593792 | ID=Msa0575690-mRNA-1:three_prime_utr;Parent=Msa0575690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
