Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223770 | XP_003597524.1 | 81.229 | 293 | 24 | 2 | 1 | 262 | 1 | 293 | 9.94e-166 | 470 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223770 | G7IHV3 | 81.229 | 293 | 24 | 2 | 1 | 262 | 1 | 293 | 4.75e-166 | 470 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0223740 | Msa0223770 | 0.816118 | 6.520556e-52 | -8.615850e-47 |
| Msa0223770 | Msa0224320 | 0.813417 | 2.587266e-51 | -8.615850e-47 |
| Msa0223770 | Msa0572420 | 0.817716 | 2.853835e-52 | -8.615850e-47 |
| Msa0223770 | Msa0574850 | 0.807782 | 4.272174e-50 | -8.615850e-47 |
| Msa0223770 | Msa0575470 | 0.808589 | 2.875366e-50 | -8.615850e-47 |
| Msa0223770 | Msa0575690 | 0.809343 | 1.982771e-50 | -8.615850e-47 |
| Msa0223770 | Msa0663240 | 0.811883 | 5.601937e-51 | -8.615850e-47 |
| Msa0223770 | Msa0756540 | 0.818723 | 1.689336e-52 | -8.615850e-47 |
| Msa0223770 | Msa1374470 | 0.816094 | 6.601525e-52 | -8.615850e-47 |
| Msa0223770 | Msa1460050 | 0.805923 | 1.056080e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223770 | MtrunA17_Chr2g0329471 | 81.229 | 293 | 24 | 2 | 1 | 262 | 1 | 293 | 9.14e-170 | 470 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223770 | AT3G59490.2 | 50.508 | 295 | 111 | 3 | 1 | 262 | 1 | 293 | 4.59e-102 | 299 |
| Msa0223770 | AT3G59490.1 | 47.737 | 243 | 92 | 3 | 1 | 210 | 1 | 241 | 2.07e-72 | 222 |
| Msa0223770 | AT3G59490.4 | 47.131 | 244 | 94 | 3 | 1 | 211 | 1 | 242 | 8.46e-72 | 221 |
| Msa0223770 | AT3G59490.3 | 40.000 | 175 | 67 | 3 | 1 | 146 | 1 | 166 | 2.73e-33 | 120 |
Find 45 sgRNAs with CRISPR-Local
Find 427 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGAAAATATGAAGATATT+TGG | 0.176556 | 2_1:+73434775 | None:intergenic |
| TTTGGTTGAAAGGTTATAAA+TGG | 0.226907 | 2_1:+73434793 | None:intergenic |
| TGGTCTCATTCTTGTGATTA+AGG | 0.237227 | 2_1:+73439161 | None:intergenic |
| ATACCAATTGCATAGCTAAT+TGG | 0.241854 | 2_1:+73438185 | None:intergenic |
| ATTTGTTTCAGATGGCTTCT+AGG | 0.254406 | 2_1:-73434860 | Msa0223770:intron |
| TCAAAACGTCGATTACAATT+AGG | 0.266649 | 2_1:-73439275 | Msa0223770:intron |
| GCAGAAGTAGAAGAAGAAAA+TGG | 0.269042 | 2_1:-73439375 | Msa0223770:exon |
| ACAAAATAATTTGTCTTGTA+TGG | 0.299646 | 2_1:-73433436 | Msa0223770:three_prime_UTR |
| TTTAAAGACTTCCAAACATT+TGG | 0.309425 | 2_1:+73433732 | None:intergenic |
| CATTGATCTTAGTAATTGTA+TGG | 0.373487 | 2_1:-73438068 | Msa0223770:CDS |
| CATGTTTATCACAAATCAAT+TGG | 0.376313 | 2_1:-73439313 | Msa0223770:CDS |
| TATGAAGATATTTGGTTGAA+AGG | 0.407130 | 2_1:+73434783 | None:intergenic |
| ATCTTAGTGCCAACATTGAA+TGG | 0.410040 | 2_1:-73438034 | Msa0223770:CDS |
| GCTGTATGTACTTAAATAAA+CGG | 0.430634 | 2_1:-73433574 | Msa0223770:intron |
| GTCAAACTGAAGAACTGTTA+AGG | 0.466231 | 2_1:-73434320 | Msa0223770:intron |
| TGTTTGGAAGTCTTTAAAGA+TGG | 0.469821 | 2_1:-73433727 | Msa0223770:CDS |
| AAGCCAATTAGCTATGCAAT+TGG | 0.475552 | 2_1:-73438188 | Msa0223770:CDS |
| CCTCTTGTGCTTAAATCATA+AGG | 0.475897 | 2_1:+73433816 | None:intergenic |
| AAAATTTGAGTCCCGCATCT+AGG | 0.484258 | 2_1:-73433643 | Msa0223770:three_prime_UTR |
| AGCTCAGATGCAGGCAAAGT+GGG | 0.490628 | 2_1:-73433763 | Msa0223770:CDS |
| GAAAATGGAAGCGATAGAGT+TGG | 0.497931 | 2_1:-73439360 | Msa0223770:exon |
| TATCCAGTGGTGTATCTGTT+CGG | 0.524540 | 2_1:-73434836 | Msa0223770:CDS |
| AAGAGGGAGTAAAGAACAAT+GGG | 0.528881 | 2_1:-73433799 | Msa0223770:CDS |
| CCAGTAGTTATGATCGATTA+CGG | 0.532222 | 2_1:-73439141 | Msa0223770:CDS |
| CTTCCTCAGTACTTCCCACA+TGG | 0.535183 | 2_1:-73433496 | Msa0223770:three_prime_UTR |
| TCTTAGTGCCAACATTGAAT+GGG | 0.535821 | 2_1:-73438033 | Msa0223770:intron |
| AGGAATTACCCATTCAATGT+TGG | 0.540237 | 2_1:+73438025 | None:intergenic |
| GTCGAAGAAGTGAAGAGAGT+TGG | 0.541794 | 2_1:+73439094 | None:intergenic |
| CCGTAATCGATCATAACTAC+TGG | 0.548814 | 2_1:+73439141 | None:intergenic |
| CAAACCTGCAGACAAACACT+TGG | 0.553247 | 2_1:+73434756 | None:intergenic |
| GAGAGTTGGTGTTGAAGTTG+AGG | 0.579921 | 2_1:+73439108 | None:intergenic |
| TTGGAAGTCTTTAAAGATGG+AGG | 0.580313 | 2_1:-73433724 | Msa0223770:CDS |
| CCTTATGATTTAAGCACAAG+AGG | 0.581540 | 2_1:-73433816 | Msa0223770:CDS |
| CTTTATATAAATAGTCCATG+TGG | 0.583265 | 2_1:+73433481 | None:intergenic |
| CAAGAGGGAGTAAAGAACAA+TGG | 0.597767 | 2_1:-73433800 | Msa0223770:CDS |
| TTTATATAAATAGTCCATGT+GGG | 0.607743 | 2_1:+73433482 | None:intergenic |
| AACTATAACACGATAGCTTG+AGG | 0.609298 | 2_1:+73433687 | None:intergenic |
| AGGAATAGTAATCTCAACAA+AGG | 0.622510 | 2_1:-73434345 | Msa0223770:CDS |
| TAGCTCAGATGCAGGCAAAG+TGG | 0.623273 | 2_1:-73433764 | Msa0223770:CDS |
| CTTATGATTTAAGCACAAGA+GGG | 0.625111 | 2_1:-73433815 | Msa0223770:CDS |
| TTGCCGAACAGATACACCAC+TGG | 0.634144 | 2_1:+73434833 | None:intergenic |
| AGTGGTGTATCTGTTCGGCA+AGG | 0.672406 | 2_1:-73434831 | Msa0223770:CDS |
| AGTCCATGTGGGAAGTACTG+AGG | 0.674015 | 2_1:+73433493 | None:intergenic |
| ATGGCTTCTAGGCTATCCAG+TGG | 0.682634 | 2_1:-73434849 | Msa0223770:CDS |
| GTAGTTATGATCGATTACGG+TGG | 0.742129 | 2_1:-73439138 | Msa0223770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATCTTCTTAATAATT+TGG | + | chr2_1:73435820-73435839 | None:intergenic | 10.0% |
| !!! | ACTTTATTTTATCTATGTAA+TGG | - | chr2_1:73434065-73434084 | Msa0223770:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr2_1:73436338-73436357 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr2_1:73436339-73436358 | None:intergenic | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | + | chr2_1:73436403-73436422 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | + | chr2_1:73436404-73436423 | None:intergenic | 15.0% |
| !! | CAATTGAATTAATATAGTAT+AGG | + | chr2_1:73437302-73437321 | None:intergenic | 15.0% |
| !! | AATAAATAAAGCCAATTAAA+AGG | - | chr2_1:73438246-73438265 | Msa0223770:intron | 15.0% |
| !!! | ATTCTTCTTCAACTTTTTTT+GGG | + | chr2_1:73433442-73433461 | None:intergenic | 20.0% |
| !!! | AATTCTTCTTCAACTTTTTT+TGG | + | chr2_1:73433443-73433462 | None:intergenic | 20.0% |
| !!! | TGATTTTGTTAATTCATCTT+TGG | - | chr2_1:73433858-73433877 | Msa0223770:intron | 20.0% |
| !! | TAAAATTGAGAGAAAAATGT+AGG | + | chr2_1:73434426-73434445 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr2_1:73436269-73436288 | None:intergenic | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | + | chr2_1:73436305-73436324 | None:intergenic | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | + | chr2_1:73436306-73436325 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | chr2_1:73436379-73436398 | None:intergenic | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | + | chr2_1:73436402-73436421 | None:intergenic | 20.0% |
| !! | AAGATTAAAGATTTCTCATA+AGG | + | chr2_1:73436963-73436982 | None:intergenic | 20.0% |
| !! | ATCCTACATTAAACAAAATA+TGG | - | chr2_1:73437116-73437135 | Msa0223770:intron | 20.0% |
| !! | TAAAAACGTGTTTATATAAC+TGG | - | chr2_1:73437141-73437160 | Msa0223770:intron | 20.0% |
| !! | AAAAACGTGTTTATATAACT+GGG | - | chr2_1:73437142-73437161 | Msa0223770:intron | 20.0% |
| !! | TCATCAATGGTATAAAATTT+CGG | + | chr2_1:73437220-73437239 | None:intergenic | 20.0% |
| !!! | ATGATTTGTTATAGATGTTT+GGG | - | chr2_1:73437236-73437255 | Msa0223770:intron | 20.0% |
| !! | CACAAATTACATGTTTAATA+TGG | + | chr2_1:73437935-73437954 | None:intergenic | 20.0% |
| !! | CATATTAAACATGTAATTTG+TGG | - | chr2_1:73437933-73437952 | Msa0223770:intron | 20.0% |
| !! | TAAATACACTAAAATGAGAT+AGG | + | chr2_1:73437962-73437981 | None:intergenic | 20.0% |
| !! | TTGGAAAATATGAAGATATT+TGG | + | chr2_1:73438069-73438088 | None:intergenic | 20.0% |
| !! | TATATTGTAATCACTAAATG+TGG | - | chr2_1:73438398-73438417 | Msa0223770:intron | 20.0% |
| !! | TTTATATAAATAGTCCATGT+GGG | + | chr2_1:73439362-73439381 | None:intergenic | 20.0% |
| !!! | ACAAAATAATTTGTCTTGTA+TGG | - | chr2_1:73439405-73439424 | Msa0223770:five_prime_UTR | 20.0% |
| !!! | TTCTTCTTCAACTTTTTTTG+GGG | + | chr2_1:73433441-73433460 | None:intergenic | 25.0% |
| ! | CATGTTTATCACAAATCAAT+TGG | - | chr2_1:73433528-73433547 | Msa0223770:three_prime_UTR | 25.0% |
| !! | TTTTCAACATCTTAGATTGA+TGG | - | chr2_1:73433792-73433811 | Msa0223770:CDS | 25.0% |
| ! | AAATATGTTATTCTACCTGT+GGG | + | chr2_1:73433921-73433940 | None:intergenic | 25.0% |
| !! | AACATATTTGAAGACTTGTT+TGG | - | chr2_1:73433932-73433951 | Msa0223770:intron | 25.0% |
| !! | TATCTATGTAATGGAAATAG+AGG | - | chr2_1:73434074-73434093 | Msa0223770:intron | 25.0% |
| ! | TAAGCTAGTGAAAAAAATGA+CGG | + | chr2_1:73434227-73434246 | None:intergenic | 25.0% |
| !! | TTTTGATAAGCTAATCCAAA+TGG | - | chr2_1:73434386-73434405 | Msa0223770:intron | 25.0% |
| !!! | GTTATAAGTTTTAAGCCATT+TGG | + | chr2_1:73434404-73434423 | None:intergenic | 25.0% |
| !!! | ATATAAGCTTTAAGCTAACA+GGG | + | chr2_1:73434450-73434469 | None:intergenic | 25.0% |
| ! | AGAGACAAAAAAATTAAGTC+AGG | + | chr2_1:73434562-73434581 | None:intergenic | 25.0% |
| ! | TTTCATGTGTTTATTCCTAA+TGG | - | chr2_1:73434585-73434604 | Msa0223770:intron | 25.0% |
| ! | TTTATTCCTAATGGAATGTT+TGG | - | chr2_1:73434594-73434613 | Msa0223770:intron | 25.0% |
| ! | AATTAACCAAACATTCCATT+AGG | + | chr2_1:73434603-73434622 | None:intergenic | 25.0% |
| ! | CATTGATCTTAGTAATTGTA+TGG | - | chr2_1:73434773-73434792 | Msa0223770:CDS | 25.0% |
| !!! | TTAGTTTGTTAGATTTAGTG+AGG | - | chr2_1:73434907-73434926 | Msa0223770:intron | 25.0% |
| !!! | TAGTTAGCTTTTCTTTTTGA+CGG | - | chr2_1:73434941-73434960 | Msa0223770:intron | 25.0% |
| ! | ATAAAAACTTCACTTACATC+AGG | - | chr2_1:73435065-73435084 | Msa0223770:intron | 25.0% |
| !!! | TTTTGGTTGAGAAATTGATT+TGG | - | chr2_1:73435466-73435485 | Msa0223770:intron | 25.0% |
| !! | TTTGGTTGAGAAATTGATTT+GGG | - | chr2_1:73435467-73435486 | Msa0223770:intron | 25.0% |
| !! | TTAGTCTTTGATTAGTGAAA+TGG | + | chr2_1:73435638-73435657 | None:intergenic | 25.0% |
| ! | AGACTAAAACTTCAAAAGAA+AGG | - | chr2_1:73435651-73435670 | Msa0223770:intron | 25.0% |
| !! | GGGAAAAAAATTACGAATTT+TGG | - | chr2_1:73435754-73435773 | Msa0223770:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr2_1:73436270-73436289 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | chr2_1:73436380-73436399 | None:intergenic | 25.0% |
| !! | ATTGTGTCAAGAATTTTCTT+TGG | + | chr2_1:73436777-73436796 | None:intergenic | 25.0% |
| ! | AAGAAAATTCTTGACACAAT+TGG | - | chr2_1:73436777-73436796 | Msa0223770:intron | 25.0% |
| ! | AGAAAATTCTTGACACAATT+GGG | - | chr2_1:73436778-73436797 | Msa0223770:intron | 25.0% |
| !!! | GACCATATTTTGTTTAATGT+AGG | + | chr2_1:73437121-73437140 | None:intergenic | 25.0% |
| !! | GTTTTGTAAGATTGAGTTTT+AGG | - | chr2_1:73437189-73437208 | Msa0223770:intron | 25.0% |
| ! | CATCTATAACAAATCATCAA+TGG | + | chr2_1:73437233-73437252 | None:intergenic | 25.0% |
| !!! | GATGATTTGTTATAGATGTT+TGG | - | chr2_1:73437235-73437254 | Msa0223770:intron | 25.0% |
| ! | AATTCAATTGTTCACTTTAG+AGG | - | chr2_1:73437312-73437331 | Msa0223770:intron | 25.0% |
| ! | ATATGGTTAAGTAAAAGGTA+AGG | + | chr2_1:73437354-73437373 | None:intergenic | 25.0% |
| ! | CATCAATATGGTTAAGTAAA+AGG | + | chr2_1:73437359-73437378 | None:intergenic | 25.0% |
| !! | CTTAACCATATTGATGATAT+TGG | - | chr2_1:73437363-73437382 | Msa0223770:intron | 25.0% |
| ! | TGAAACCAATATCATCAATA+TGG | + | chr2_1:73437371-73437390 | None:intergenic | 25.0% |
| ! | ACATAATAATATCCACAACA+GGG | + | chr2_1:73437776-73437795 | None:intergenic | 25.0% |
| ! | ATAACATTTAAATCTCGTAC+AGG | - | chr2_1:73437848-73437867 | Msa0223770:intron | 25.0% |
| ! | TAACATTTAAATCTCGTACA+GGG | - | chr2_1:73437849-73437868 | Msa0223770:intron | 25.0% |
| !! | AAAAACAATGTGCTATTCTA+TGG | + | chr2_1:73437909-73437928 | None:intergenic | 25.0% |
| ! | GTGTATTTATTTGTTTCAGA+TGG | - | chr2_1:73437973-73437992 | Msa0223770:intron | 25.0% |
| ! | TTTGGTTGAAAGGTTATAAA+TGG | + | chr2_1:73438051-73438070 | None:intergenic | 25.0% |
| ! | TATGAAGATATTTGGTTGAA+AGG | + | chr2_1:73438061-73438080 | None:intergenic | 25.0% |
| !! | CATTTTCATAAAACAAACCA+TGG | + | chr2_1:73438127-73438146 | None:intergenic | 25.0% |
| !! | TTTGAGAATACCTTTATTTC+CGG | + | chr2_1:73438207-73438226 | None:intergenic | 25.0% |
| ! | GATTATGTTAACAATCAAAG+AGG | - | chr2_1:73438310-73438329 | Msa0223770:intron | 25.0% |
| ! | ATAACTATTCAACCATATTC+AGG | - | chr2_1:73438347-73438366 | Msa0223770:intron | 25.0% |
| !!! | TTGATATTTTGAGTTCCATA+TGG | - | chr2_1:73438623-73438642 | Msa0223770:intron | 25.0% |
| !!! | TGATATTTTGAGTTCCATAT+GGG | - | chr2_1:73438624-73438643 | Msa0223770:intron | 25.0% |
| !! | AATCACCAAAGTTTTCTTTT+GGG | + | chr2_1:73438802-73438821 | None:intergenic | 25.0% |
| ! | ATTGACTGAATAAAGAATTC+AGG | + | chr2_1:73438959-73438978 | None:intergenic | 25.0% |
| ! | TTTAAAGACTTCCAAACATT+TGG | + | chr2_1:73439112-73439131 | None:intergenic | 25.0% |
| ! | GCTGTATGTACTTAAATAAA+CGG | - | chr2_1:73439267-73439286 | Msa0223770:intron | 25.0% |
| ! | CTTTATATAAATAGTCCATG+TGG | + | chr2_1:73439363-73439382 | None:intergenic | 25.0% |
| !!! | TCTTCTTCAACTTTTTTTGG+GGG | + | chr2_1:73433440-73433459 | None:intergenic | 30.0% |
| ! | TCAAAACGTCGATTACAATT+AGG | - | chr2_1:73433566-73433585 | Msa0223770:three_prime_UTR | 30.0% |
| ! | ATTGAAAGAGATGAAGTGTT+AGG | + | chr2_1:73433594-73433613 | None:intergenic | 30.0% |
| AATATGTTATTCTACCTGTG+GGG | + | chr2_1:73433920-73433939 | None:intergenic | 30.0% | |
| CAAATATGTTATTCTACCTG+TGG | + | chr2_1:73433922-73433941 | None:intergenic | 30.0% | |
| ACAATAGCTTATAGCATGTT+TGG | - | chr2_1:73434125-73434144 | Msa0223770:intron | 30.0% | |
| AAAAATGACGGTTATCAAAC+CGG | + | chr2_1:73434215-73434234 | None:intergenic | 30.0% | |
| ! | TTTTGATAAGCTAATCCAAG+TGG | - | chr2_1:73434275-73434294 | Msa0223770:intron | 30.0% |
| !! | AAAATAAGCTTTAAGCCACT+TGG | + | chr2_1:73434293-73434312 | None:intergenic | 30.0% |
| !! | AAAATAAGCTTTAAGCTGCT+TGG | + | chr2_1:73434348-73434367 | None:intergenic | 30.0% |
| !! | TATAAGCTTTAAGCTAACAG+GGG | + | chr2_1:73434449-73434468 | None:intergenic | 30.0% |
| !! | GATATAAGCTTTAAGCTAAC+AGG | + | chr2_1:73434451-73434470 | None:intergenic | 30.0% |
| TTCTGTTTGGTAAAAAACTG+CGG | + | chr2_1:73434523-73434542 | None:intergenic | 30.0% | |
| GAATAACTTCAGATTCTGTT+TGG | + | chr2_1:73434536-73434555 | None:intergenic | 30.0% | |
| ATACCAATTGCATAGCTAAT+TGG | + | chr2_1:73434659-73434678 | None:intergenic | 30.0% | |
| AAACGAGGAGGAAAAATTAA+TGG | - | chr2_1:73434713-73434732 | Msa0223770:intron | 30.0% | |
| AAAGAAGTGAAAGACAGAAA+AGG | + | chr2_1:73434866-73434885 | None:intergenic | 30.0% | |
| AAAGAAACTAAAGACAGTCT+AGG | - | chr2_1:73435096-73435115 | Msa0223770:intron | 30.0% | |
| TAGGATCATATTAGCAATAG+AGG | - | chr2_1:73435115-73435134 | Msa0223770:intron | 30.0% | |
| AATCAAAGTTTCCTCAAACT+TGG | + | chr2_1:73435265-73435284 | None:intergenic | 30.0% | |
| ATCGGCATATAACCATTAAA+TGG | - | chr2_1:73435331-73435350 | Msa0223770:intron | 30.0% | |
| TCGGCATATAACCATTAAAT+GGG | - | chr2_1:73435332-73435351 | Msa0223770:intron | 30.0% | |
| TATCCCATCATAGATCTATA+TGG | - | chr2_1:73435370-73435389 | Msa0223770:intron | 30.0% | |
| CATCCATATAGATCTATGAT+GGG | + | chr2_1:73435376-73435395 | None:intergenic | 30.0% | |
| TCATCCATATAGATCTATGA+TGG | + | chr2_1:73435377-73435396 | None:intergenic | 30.0% | |
| ! | TTTGAGGCAAAACCAAAATT+AGG | - | chr2_1:73435430-73435449 | Msa0223770:intron | 30.0% |
| !!! | AGAAATTGATTTGGGTTTTG+AGG | - | chr2_1:73435475-73435494 | Msa0223770:intron | 30.0% |
| !! | TGTTGGTTTGGAAATTGATT+TGG | - | chr2_1:73435499-73435518 | Msa0223770:intron | 30.0% |
| !! | GTTGGTTTGGAAATTGATTT+GGG | - | chr2_1:73435500-73435519 | Msa0223770:intron | 30.0% |
| !! | ATTTGGGTGTTGATAATTGT+TGG | - | chr2_1:73435549-73435568 | Msa0223770:intron | 30.0% |
| !! | TTTGGGTGTTGATAATTGTT+GGG | - | chr2_1:73435550-73435569 | Msa0223770:intron | 30.0% |
| !!! | GTTGATAATTGTTGGGATTT+TGG | - | chr2_1:73435557-73435576 | Msa0223770:intron | 30.0% |
| !! | TTGGGATTTTGGTAGTTAAA+TGG | - | chr2_1:73435568-73435587 | Msa0223770:intron | 30.0% |
| !! | TGGGATTTTGGTAGTTAAAT+GGG | - | chr2_1:73435569-73435588 | Msa0223770:intron | 30.0% |
| ! | ATGGGTAATCAGAAGAATTT+TGG | - | chr2_1:73435587-73435606 | Msa0223770:intron | 30.0% |
| ! | TGGGTAATCAGAAGAATTTT+GGG | - | chr2_1:73435588-73435607 | Msa0223770:intron | 30.0% |
| ! | GTGTTGAATTGATTGTTGTT+GGG | - | chr2_1:73435610-73435629 | Msa0223770:intron | 30.0% |
| ATCCAAGTCTCTATTTATAG+AGG | - | chr2_1:73435733-73435752 | Msa0223770:intron | 30.0% | |
| TCCAAGTCTCTATTTATAGA+GGG | - | chr2_1:73435734-73435753 | Msa0223770:intron | 30.0% | |
| CAAAAGTGAACATTGATGTT+GGG | + | chr2_1:73436088-73436107 | None:intergenic | 30.0% | |
| ATTTAACTCTGCTACAAACT+TGG | - | chr2_1:73436184-73436203 | Msa0223770:intron | 30.0% | |
| !! | TGAAATGGGTCAGTTATTTT+GGG | + | chr2_1:73436291-73436310 | None:intergenic | 30.0% |
| ! | TTGAAATGGGTCAGTTATTT+TGG | + | chr2_1:73436292-73436311 | None:intergenic | 30.0% |
| TGTATAAATAAAGGGGAAAG+TGG | + | chr2_1:73436395-73436414 | None:intergenic | 30.0% | |
| !!! | TCTGTTTTAATGCTAAGGAA+TGG | + | chr2_1:73436678-73436697 | None:intergenic | 30.0% |
| ATTCCTTAGCATTAAAACAG+AGG | - | chr2_1:73436677-73436696 | Msa0223770:intron | 30.0% | |
| GACAGTTGGAAAAATAGATT+TGG | - | chr2_1:73436744-73436763 | Msa0223770:intron | 30.0% | |
| AGGAATCAGATTAACAAAGA+TGG | + | chr2_1:73436943-73436962 | None:intergenic | 30.0% | |
| ATCTTTAATCTTAGCCTCTA+AGG | - | chr2_1:73436971-73436990 | Msa0223770:intron | 30.0% | |
| CAATGGTATAAAATTTCGGT+TGG | + | chr2_1:73437216-73437235 | None:intergenic | 30.0% | |
| TGAAACACTTTATGAAGACA+CGG | + | chr2_1:73437480-73437499 | None:intergenic | 30.0% | |
| !!! | CTTATACTTTTTTACCTGCT+GGG | - | chr2_1:73437568-73437587 | Msa0223770:intron | 30.0% |
| !! | TGGGATGTTTTGAATAGAAA+TGG | - | chr2_1:73437695-73437714 | Msa0223770:intron | 30.0% |
| ACATTACTAACTACCTTTAG+TGG | + | chr2_1:73437752-73437771 | None:intergenic | 30.0% | |
| CATAATAATATCCACAACAG+GGG | + | chr2_1:73437775-73437794 | None:intergenic | 30.0% | |
| GACATAATAATATCCACAAC+AGG | + | chr2_1:73437777-73437796 | None:intergenic | 30.0% | |
| ATTCTATGGAACAACCATAA+AGG | + | chr2_1:73437895-73437914 | None:intergenic | 30.0% | |
| ! | TGTTTTATGAAAATGCCGTT+TGG | - | chr2_1:73438132-73438151 | Msa0223770:CDS | 30.0% |
| AATTTCTACATCACACCAAA+CGG | + | chr2_1:73438150-73438169 | None:intergenic | 30.0% | |
| ! | TCCTGTTATCTCCTTTTAAT+TGG | + | chr2_1:73438260-73438279 | None:intergenic | 30.0% |
| AATCACCTAAACACTAAAAG+CGG | + | chr2_1:73438294-73438313 | None:intergenic | 30.0% | |
| ATCATCTCAATTCCTGAATA+TGG | + | chr2_1:73438362-73438381 | None:intergenic | 30.0% | |
| TCAATTTGTGTTGAAGTTCT+TGG | + | chr2_1:73438452-73438471 | None:intergenic | 30.0% | |
| ATTAAAATTTGAGCTCTTGC+AGG | - | chr2_1:73438476-73438495 | Msa0223770:intron | 30.0% | |
| AGGAATAGTAATCTCAACAA+AGG | - | chr2_1:73438496-73438515 | Msa0223770:intron | 30.0% | |
| ! | ATCACCAAAGTTTTCTTTTG+GGG | + | chr2_1:73438801-73438820 | None:intergenic | 30.0% |
| ! | CAATCACCAAAGTTTTCTTT+TGG | + | chr2_1:73438803-73438822 | None:intergenic | 30.0% |
| ! | TATGTATCAAGCTTTGTCAA+AGG | + | chr2_1:73438878-73438897 | None:intergenic | 30.0% |
| ACAAAGCTTGATACATAAAG+TGG | - | chr2_1:73438881-73438900 | Msa0223770:intron | 30.0% | |
| CAAAGCTTGATACATAAAGT+GGG | - | chr2_1:73438882-73438901 | Msa0223770:intron | 30.0% | |
| TGAATAAAGAATTCAGGATG+TGG | + | chr2_1:73438953-73438972 | None:intergenic | 30.0% | |
| CTTATGATTTAAGCACAAGA+GGG | - | chr2_1:73439026-73439045 | Msa0223770:CDS | 30.0% | |
| ! | TGTTTGGAAGTCTTTAAAGA+TGG | - | chr2_1:73439114-73439133 | Msa0223770:CDS | 30.0% |
| ! | AATTTTGTTCTGTCTAGATG+CGG | + | chr2_1:73439184-73439203 | None:intergenic | 30.0% |
| GCAGAAGTAGAAGAAGAAAA+TGG | - | chr2_1:73433466-73433485 | Msa0223770:three_prime_UTR | 35.0% | |
| !!! | GACGTTTTGAAGAAGATTTG+AGG | + | chr2_1:73433556-73433575 | None:intergenic | 35.0% |
| TGGTCTCATTCTTGTGATTA+AGG | + | chr2_1:73433683-73433702 | None:intergenic | 35.0% | |
| CCAGTAGTTATGATCGATTA+CGG | - | chr2_1:73433700-73433719 | Msa0223770:CDS | 35.0% | |
| ! | GCTTATTTCATGAGCTTTTC+AGG | - | chr2_1:73434001-73434020 | Msa0223770:intron | 35.0% |
| ! | GTAATGGAAATAGAGGATTC+TGG | - | chr2_1:73434081-73434100 | Msa0223770:intron | 35.0% |
| ATGAAAGTAGCGGTTGAATT+AGG | + | chr2_1:73434500-73434519 | None:intergenic | 35.0% | |
| AAGCCAATTAGCTATGCAAT+TGG | - | chr2_1:73434653-73434672 | Msa0223770:intron | 35.0% | |
| ! | TAATTTTTCCTCCTCGTTTG+AGG | + | chr2_1:73434712-73434731 | None:intergenic | 35.0% |
| ATCTTAGTGCCAACATTGAA+TGG | - | chr2_1:73434807-73434826 | Msa0223770:CDS | 35.0% | |
| TCTTAGTGCCAACATTGAAT+GGG | - | chr2_1:73434808-73434827 | Msa0223770:CDS | 35.0% | |
| AGGAATTACCCATTCAATGT+TGG | + | chr2_1:73434819-73434838 | None:intergenic | 35.0% | |
| GAGAAAAACACATATACTGC+TGG | + | chr2_1:73434844-73434863 | None:intergenic | 35.0% | |
| GATTTAGTGAGGATTCAGTT+AGG | - | chr2_1:73434918-73434937 | Msa0223770:intron | 35.0% | |
| ! | ACGGCAAGAAACTTTTATGA+AGG | - | chr2_1:73434960-73434979 | Msa0223770:intron | 35.0% |
| ! | CGGCAAGAAACTTTTATGAA+GGG | - | chr2_1:73434961-73434980 | Msa0223770:intron | 35.0% |
| ! | GGCAAGAAACTTTTATGAAG+GGG | - | chr2_1:73434962-73434981 | Msa0223770:intron | 35.0% |
| !! | ATGGATTAGTGTCTATTGCT+AGG | + | chr2_1:73435019-73435038 | None:intergenic | 35.0% |
| !!! | TGTGCTCATTTTGAGTTGTT+TGG | - | chr2_1:73435202-73435221 | Msa0223770:intron | 35.0% |
| CGGCATATAACCATTAAATG+GGG | - | chr2_1:73435333-73435352 | Msa0223770:intron | 35.0% | |
| GGCATATAACCATTAAATGG+GGG | - | chr2_1:73435334-73435353 | Msa0223770:intron | 35.0% | |
| ! | ATGAAAGTTGTTTCGAACAG+AGG | - | chr2_1:73435393-73435412 | Msa0223770:intron | 35.0% |
| ! | CCTCAAAACATGCCTAATTT+TGG | + | chr2_1:73435445-73435464 | None:intergenic | 35.0% |
| ! | CCAAAATTAGGCATGTTTTG+AGG | - | chr2_1:73435442-73435461 | Msa0223770:intron | 35.0% |
| !!! | TAGGCATGTTTTGAGGATTT+TGG | - | chr2_1:73435449-73435468 | Msa0223770:intron | 35.0% |
| !!! | GGAAATTGATTTGGGTTTTG+AGG | - | chr2_1:73435508-73435527 | Msa0223770:intron | 35.0% |
| ! | TGTTGGTTGGGAAATTGATT+TGG | - | chr2_1:73435532-73435551 | Msa0223770:intron | 35.0% |
| ! | GTTGGTTGGGAAATTGATTT+GGG | - | chr2_1:73435533-73435552 | Msa0223770:intron | 35.0% |
| ! | GGTGTTGAATTGATTGTTGT+TGG | - | chr2_1:73435609-73435628 | Msa0223770:intron | 35.0% |
| GAGACTTGGATCATTTGATT+TGG | + | chr2_1:73435724-73435743 | None:intergenic | 35.0% | |
| TCCCTCTATAAATAGAGACT+TGG | + | chr2_1:73435738-73435757 | None:intergenic | 35.0% | |
| TCCTCCATGTCATATTCAAT+AGG | - | chr2_1:73436002-73436021 | Msa0223770:intron | 35.0% | |
| GTTGCCTATTGAATATGACA+TGG | + | chr2_1:73436009-73436028 | None:intergenic | 35.0% | |
| GCAAAAGTGAACATTGATGT+TGG | + | chr2_1:73436089-73436108 | None:intergenic | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | + | chr2_1:73436256-73436275 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | - | chr2_1:73436425-73436444 | Msa0223770:intron | 35.0% | |
| CCAAAGTAGGTCAATTATAC+CGG | - | chr2_1:73436438-73436457 | Msa0223770:intron | 35.0% | |
| CAAAGTAGGTCAATTATACC+GGG | - | chr2_1:73436439-73436458 | Msa0223770:intron | 35.0% | |
| TGAATATGCAGATGCAAAGT+TGG | + | chr2_1:73436567-73436586 | None:intergenic | 35.0% | |
| AACTTTGCATCTGCATATTC+AGG | - | chr2_1:73436566-73436585 | Msa0223770:intron | 35.0% | |
| ATATTCAGGCTAACATTTGC+TGG | - | chr2_1:73436580-73436599 | Msa0223770:intron | 35.0% | |
| TATTCAGGCTAACATTTGCT+GGG | - | chr2_1:73436581-73436600 | Msa0223770:intron | 35.0% | |
| !!! | TCTCCTCTGTTTTAATGCTA+AGG | + | chr2_1:73436683-73436702 | None:intergenic | 35.0% |
| AACTAACTACCTAGAGATCA+GGG | + | chr2_1:73436835-73436854 | None:intergenic | 35.0% | |
| AGAGAAAGTTTAAGCCTTAG+AGG | + | chr2_1:73436988-73437007 | None:intergenic | 35.0% | |
| GTTGGATATACTGAGGTTTA+GGG | + | chr2_1:73437016-73437035 | None:intergenic | 35.0% | |
| TGTTGGATATACTGAGGTTT+AGG | + | chr2_1:73437017-73437036 | None:intergenic | 35.0% | |
| AATGGATGTTGGATATACTG+AGG | + | chr2_1:73437023-73437042 | None:intergenic | 35.0% | |
| TCAGTATATCCAACATCCAT+TGG | - | chr2_1:73437022-73437041 | Msa0223770:intron | 35.0% | |
| CAGTATATCCAACATCCATT+GGG | - | chr2_1:73437023-73437042 | Msa0223770:intron | 35.0% | |
| CTTTATGAAGACACGGAAAA+TGG | + | chr2_1:73437473-73437492 | None:intergenic | 35.0% | |
| !!! | GCTTATACTTTTTTACCTGC+TGG | - | chr2_1:73437567-73437586 | Msa0223770:intron | 35.0% |
| ATACCCGATTCCTAAATCTT+AGG | - | chr2_1:73437605-73437624 | Msa0223770:intron | 35.0% | |
| TACCCGATTCCTAAATCTTA+GGG | - | chr2_1:73437606-73437625 | Msa0223770:intron | 35.0% | |
| ATTTGTTTCAGATGGCTTCT+AGG | - | chr2_1:73437981-73438000 | Msa0223770:intron | 35.0% | |
| GCCAATTAAAAGGAGATAAC+AGG | - | chr2_1:73438256-73438275 | Msa0223770:intron | 35.0% | |
| !! | GATTTCCGCTTTTAGTGTTT+AGG | - | chr2_1:73438286-73438305 | Msa0223770:intron | 35.0% |
| TGTTAACAATCAAAGAGGTG+TGG | - | chr2_1:73438315-73438334 | Msa0223770:intron | 35.0% | |
| GTCAAACTGAAGAACTGTTA+AGG | - | chr2_1:73438521-73438540 | Msa0223770:intron | 35.0% | |
| AACAATTGAATCACGAGATG+TGG | - | chr2_1:73438595-73438614 | Msa0223770:intron | 35.0% | |
| !!! | TATTTTGAGTTCCATATGGG+TGG | - | chr2_1:73438627-73438646 | Msa0223770:intron | 35.0% |
| ! | TTTTCCCACCTTTTCAATGA+GGG | + | chr2_1:73438739-73438758 | None:intergenic | 35.0% |
| ! | TCACCAAAGTTTTCTTTTGG+GGG | + | chr2_1:73438800-73438819 | None:intergenic | 35.0% |
| CCTCTTGTGCTTAAATCATA+AGG | + | chr2_1:73439028-73439047 | None:intergenic | 35.0% | |
| CCTTATGATTTAAGCACAAG+AGG | - | chr2_1:73439025-73439044 | Msa0223770:CDS | 35.0% | |
| AAGAGGGAGTAAAGAACAAT+GGG | - | chr2_1:73439042-73439061 | Msa0223770:CDS | 35.0% | |
| GGGAAAAATGTCCAAATGTT+TGG | - | chr2_1:73439098-73439117 | Msa0223770:CDS | 35.0% | |
| ! | TTGGAAGTCTTTAAAGATGG+AGG | - | chr2_1:73439117-73439136 | Msa0223770:CDS | 35.0% |
| AACTATAACACGATAGCTTG+AGG | + | chr2_1:73439157-73439176 | None:intergenic | 35.0% | |
| ! | ATTTTGTTCTGTCTAGATGC+GGG | + | chr2_1:73439183-73439202 | None:intergenic | 35.0% |
| ! | AATTTTGTTCTGCCTAGATG+CGG | + | chr2_1:73439213-73439232 | None:intergenic | 35.0% |
| ! | AAGCATGTTAGGTACTTTTG+GGG | + | chr2_1:73439241-73439260 | None:intergenic | 35.0% |
| ! | GAAGCATGTTAGGTACTTTT+GGG | + | chr2_1:73439242-73439261 | None:intergenic | 35.0% |
| ! | TGAAGCATGTTAGGTACTTT+TGG | + | chr2_1:73439243-73439262 | None:intergenic | 35.0% |
| !!! | ACAGCTTTTTGAAGCATGTT+AGG | + | chr2_1:73439252-73439271 | None:intergenic | 35.0% |
| GAAAATGGAAGCGATAGAGT+TGG | - | chr2_1:73433481-73433500 | Msa0223770:three_prime_UTR | 40.0% | |
| CCGTAATCGATCATAACTAC+TGG | + | chr2_1:73433703-73433722 | None:intergenic | 40.0% | |
| GTAGTTATGATCGATTACGG+TGG | - | chr2_1:73433703-73433722 | Msa0223770:CDS | 40.0% | |
| GCTCATACGACTAAAATGAC+CGG | - | chr2_1:73434193-73434212 | Msa0223770:intron | 40.0% | |
| AAAACTGCGGATGAAAGTAG+CGG | + | chr2_1:73434510-73434529 | None:intergenic | 40.0% | |
| !!! | GACTGTTTTTTCCTCAAACG+AGG | - | chr2_1:73434698-73434717 | Msa0223770:intron | 40.0% |
| !!! | TGTTTTTTCCTCAAACGAGG+AGG | - | chr2_1:73434701-73434720 | Msa0223770:intron | 40.0% |
| AAACACATATACTGCTGGAG+AGG | + | chr2_1:73434839-73434858 | None:intergenic | 40.0% | |
| ATAACCATTGAGTCTGACTG+AGG | + | chr2_1:73435183-73435202 | None:intergenic | 40.0% | |
| AGTCGGATTCTGACAATCAT+CGG | - | chr2_1:73435313-73435332 | Msa0223770:intron | 40.0% | |
| TCTCAAACACCCCCATTTAA+TGG | + | chr2_1:73435346-73435365 | None:intergenic | 40.0% | |
| !! | TTAAATGGGGGTGTTTGAGA+TGG | - | chr2_1:73435346-73435365 | Msa0223770:intron | 40.0% |
| ! | AAGTTGTTTCGAACAGAGGA+TGG | - | chr2_1:73435397-73435416 | Msa0223770:intron | 40.0% |
| ! | AGTTGTTTCGAACAGAGGAT+GGG | - | chr2_1:73435398-73435417 | Msa0223770:intron | 40.0% |
| GGATGGGTGATTGAAATTTG+AGG | - | chr2_1:73435414-73435433 | Msa0223770:intron | 40.0% | |
| !!! | GATTTGGGTTTTGAGGATGT+TGG | - | chr2_1:73435482-73435501 | Msa0223770:intron | 40.0% |
| !!! | GATTTGGGTTTTGAGGATGT+TGG | - | chr2_1:73435482-73435501 | Msa0223770:intron | 40.0% |
| ACAACATATTCTCTCTCCGA+GGG | - | chr2_1:73435884-73435903 | Msa0223770:intron | 40.0% | |
| !!! | GCGTTTTTACTGGCTTTCAT+GGG | + | chr2_1:73435927-73435946 | None:intergenic | 40.0% |
| GCCTATTGAATATGACATGG+AGG | + | chr2_1:73436006-73436025 | None:intergenic | 40.0% | |
| TTCAATAGGCAACACTCCAA+TGG | - | chr2_1:73436016-73436035 | Msa0223770:intron | 40.0% | |
| !! | GTTGAAGCTTGTTGAACCAT+TGG | + | chr2_1:73436035-73436054 | None:intergenic | 40.0% |
| TGGTTCAACAAGCTTCAACA+AGG | - | chr2_1:73436036-73436055 | Msa0223770:intron | 40.0% | |
| GGTTCAACAAGCTTCAACAA+GGG | - | chr2_1:73436037-73436056 | Msa0223770:intron | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | + | chr2_1:73436255-73436274 | None:intergenic | 40.0% | |
| CCGGTATAATTGACCTACTT+TGG | + | chr2_1:73436441-73436460 | None:intergenic | 40.0% | |
| ! | AACTTTTCAGTGTTACCGTG+CGG | + | chr2_1:73436516-73436535 | None:intergenic | 40.0% |
| GGTAACACTGAAAAGTTGAG+TGG | - | chr2_1:73436519-73436538 | Msa0223770:intron | 40.0% | |
| !! | TTTCTGGTTCACATCTCCAT+TGG | + | chr2_1:73436617-73436636 | None:intergenic | 40.0% |
| AACCAGAAATGCTGTGTTAG+TGG | - | chr2_1:73436628-73436647 | Msa0223770:intron | 40.0% | |
| ACCAGAAATGCTGTGTTAGT+GGG | - | chr2_1:73436629-73436648 | Msa0223770:intron | 40.0% | |
| AGCATTAAAACAGAGGAGAC+AGG | - | chr2_1:73436684-73436703 | Msa0223770:intron | 40.0% | |
| ATTAAAACAGAGGAGACAGG+TGG | - | chr2_1:73436687-73436706 | Msa0223770:intron | 40.0% | |
| AATACCTTTCTTCTCTAGCC+TGG | - | chr2_1:73436720-73436739 | Msa0223770:intron | 40.0% | |
| !! | CTATTTTTCCAACTGTCACC+AGG | + | chr2_1:73436741-73436760 | None:intergenic | 40.0% |
| CAACTAACTACCTAGAGATC+AGG | + | chr2_1:73436836-73436855 | None:intergenic | 40.0% | |
| TAGTGTCTTCCGCAGAAAAT+GGG | + | chr2_1:73437445-73437464 | None:intergenic | 40.0% | |
| TTAGTGTCTTCCGCAGAAAA+TGG | + | chr2_1:73437446-73437465 | None:intergenic | 40.0% | |
| ACCCGATTCCTAAATCTTAG+GGG | - | chr2_1:73437607-73437626 | Msa0223770:intron | 40.0% | |
| TCCCCTAAGATTTAGGAATC+GGG | + | chr2_1:73437611-73437630 | None:intergenic | 40.0% | |
| GTCCCCTAAGATTTAGGAAT+CGG | + | chr2_1:73437612-73437631 | None:intergenic | 40.0% | |
| CGTATCAACCATGTCATACT+TGG | - | chr2_1:73437659-73437678 | Msa0223770:intron | 40.0% | |
| GGAAAGAACCAAGTATGACA+TGG | + | chr2_1:73437670-73437689 | None:intergenic | 40.0% | |
| ! | TGTCATACTTGGTTCTTTCC+AGG | - | chr2_1:73437670-73437689 | Msa0223770:intron | 40.0% |
| TATTCAAAACATCCCACTCC+TGG | + | chr2_1:73437691-73437710 | None:intergenic | 40.0% | |
| TAAACCCTGAAAGCCACTAA+AGG | - | chr2_1:73437736-73437755 | Msa0223770:intron | 40.0% | |
| ACTACCTTTAGTGGCTTTCA+GGG | + | chr2_1:73437743-73437762 | None:intergenic | 40.0% | |
| AACTACCTTTAGTGGCTTTC+AGG | + | chr2_1:73437744-73437763 | None:intergenic | 40.0% | |
| !! | GTATAGACTTGTTAGTGCGA+AGG | - | chr2_1:73437808-73437827 | Msa0223770:intron | 40.0% |
| !! | AAAGGAGGCGTAAGTTGATA+TGG | + | chr2_1:73437877-73437896 | None:intergenic | 40.0% |
| ATCAACTTACGCCTCCTTTA+TGG | - | chr2_1:73437878-73437897 | Msa0223770:intron | 40.0% | |
| CTATGGAACAACCATAAAGG+AGG | + | chr2_1:73437892-73437911 | None:intergenic | 40.0% | |
| TATCCAGTGGTGTATCTGTT+CGG | - | chr2_1:73438005-73438024 | Msa0223770:intron | 40.0% | |
| ! | TTTTCCAAGTGTTTGTCTGC+AGG | - | chr2_1:73438081-73438100 | Msa0223770:CDS | 40.0% |
| !!! | GTTTTCCTTAGTCTTGTCCA+TGG | - | chr2_1:73438107-73438126 | Msa0223770:CDS | 40.0% |
| ACAAACCATGGACAAGACTA+AGG | + | chr2_1:73438115-73438134 | None:intergenic | 40.0% | |
| ! | GAATACCTTTATTTCCGGAC+CGG | + | chr2_1:73438202-73438221 | None:intergenic | 40.0% |
| ACAACTAAAGTCCACCCATA+TGG | + | chr2_1:73438641-73438660 | None:intergenic | 40.0% | |
| TAGACTTAGTGTAGCCTTCT+AGG | - | chr2_1:73438660-73438679 | Msa0223770:intron | 40.0% | |
| AGACTTAGTGTAGCCTTCTA+GGG | - | chr2_1:73438661-73438680 | Msa0223770:intron | 40.0% | |
| TTAGCTTCGCCTAAGTGATA+GGG | + | chr2_1:73438709-73438728 | None:intergenic | 40.0% | |
| ACATCTGACCCTCATTGAAA+AGG | - | chr2_1:73438728-73438747 | Msa0223770:intron | 40.0% | |
| ! | CTTTTCCCACCTTTTCAATG+AGG | + | chr2_1:73438740-73438759 | None:intergenic | 40.0% |
| CTCATTGAAAAGGTGGGAAA+AGG | - | chr2_1:73438738-73438757 | Msa0223770:intron | 40.0% | |
| TGAAAAGGTGGGAAAAGGTA+AGG | - | chr2_1:73438743-73438762 | Msa0223770:intron | 40.0% | |
| GAAAAGGTGGGAAAAGGTAA+GGG | - | chr2_1:73438744-73438763 | Msa0223770:intron | 40.0% | |
| AAAAGGTGGGAAAAGGTAAG+GGG | - | chr2_1:73438745-73438764 | Msa0223770:intron | 40.0% | |
| !! | AAGTTTTCTTTTGGGGGAGA+AGG | + | chr2_1:73438794-73438813 | None:intergenic | 40.0% |
| TCTCCCCCAAAAGAAAACTT+TGG | - | chr2_1:73438794-73438813 | Msa0223770:intron | 40.0% | |
| CAAGAGGGAGTAAAGAACAA+TGG | - | chr2_1:73439041-73439060 | Msa0223770:CDS | 40.0% | |
| AAAATTTGAGTCCCGCATCT+AGG | - | chr2_1:73439198-73439217 | Msa0223770:intron | 40.0% | |
| ! | ATTTTGTTCTGCCTAGATGC+GGG | + | chr2_1:73439212-73439231 | None:intergenic | 40.0% |
| GCATCTAGGCAGAACAAAAT+TGG | - | chr2_1:73439212-73439231 | Msa0223770:intron | 40.0% | |
| !! | GAGAGTTGGTGTTGAAGTTG+AGG | + | chr2_1:73433736-73433755 | None:intergenic | 45.0% |
| GTCGAAGAAGTGAAGAGAGT+TGG | + | chr2_1:73433750-73433769 | None:intergenic | 45.0% | |
| TCTTGAACAAGAATCCCCAC+AGG | - | chr2_1:73433903-73433922 | Msa0223770:intron | 45.0% | |
| GTGTCTATTGCTAGGCAACA+TGG | + | chr2_1:73435011-73435030 | None:intergenic | 45.0% | |
| AGTAAAAATGCTGCTGCGCA+TGG | + | chr2_1:73435038-73435057 | None:intergenic | 45.0% | |
| GAGTTGTTTGGATCCACTGT+AGG | - | chr2_1:73435214-73435233 | Msa0223770:intron | 45.0% | |
| AGTTTCCTCAAACTTGGTCG+AGG | + | chr2_1:73435259-73435278 | None:intergenic | 45.0% | |
| TGAGTATGCTGCAACTCACT+TGG | + | chr2_1:73435291-73435310 | None:intergenic | 45.0% | |
| GTTGCAGCATACTCAACAGT+CGG | - | chr2_1:73435296-73435315 | Msa0223770:intron | 45.0% | |
| !!! | GGGTTTTGAGGATGTTGGTT+TGG | - | chr2_1:73435487-73435506 | Msa0223770:intron | 45.0% |
| !!! | TGGGTTTTGAGGATGTTGGT+TGG | - | chr2_1:73435486-73435505 | Msa0223770:intron | 45.0% |
| !!! | GGGTTTTGAGGATGTTGGTT+GGG | - | chr2_1:73435487-73435506 | Msa0223770:intron | 45.0% |
| !! | GTGGATAAAGCATTGACACG+TGG | + | chr2_1:73435866-73435885 | None:intergenic | 45.0% |
| CTCGGAGAGAGAATATGTTG+TGG | + | chr2_1:73435885-73435904 | None:intergenic | 45.0% | |
| CACAACATATTCTCTCTCCG+AGG | - | chr2_1:73435883-73435902 | Msa0223770:intron | 45.0% | |
| !!! | CGCGTTTTTACTGGCTTTCA+TGG | + | chr2_1:73435928-73435947 | None:intergenic | 45.0% |
| TTTGCAGTGCCATGTTCAGA+AGG | - | chr2_1:73436104-73436123 | Msa0223770:intron | 45.0% | |
| AGATGGGAACCTTCTGAACA+TGG | + | chr2_1:73436116-73436135 | None:intergenic | 45.0% | |
| TCAGAAGGTTCCCATCTATC+AGG | - | chr2_1:73436119-73436138 | Msa0223770:intron | 45.0% | |
| TAGAGCTGCTCCTGATAGAT+GGG | + | chr2_1:73436132-73436151 | None:intergenic | 45.0% | |
| TTAGAGCTGCTCCTGATAGA+TGG | + | chr2_1:73436133-73436152 | None:intergenic | 45.0% | |
| TTCTCCAAACTGCTCAAGAC+AGG | + | chr2_1:73436165-73436184 | None:intergenic | 45.0% | |
| AAAAATTACTCCCTCCGTCC+CGG | - | chr2_1:73436234-73436253 | Msa0223770:intron | 45.0% | |
| GTAGGTCAATTATACCGGGA+CGG | - | chr2_1:73436443-73436462 | Msa0223770:intron | 45.0% | |
| AAATGATACTACCTCCGTCC+CGG | + | chr2_1:73436460-73436479 | None:intergenic | 45.0% | |
| TCACACCAGGACAGAAAATC+TGG | + | chr2_1:73437080-73437099 | None:intergenic | 45.0% | |
| ! | TTTTCTGTCCTGGTGTGAAG+AGG | - | chr2_1:73437082-73437101 | Msa0223770:intron | 45.0% |
| TTTCTGTCCTGGTGTGAAGA+GGG | - | chr2_1:73437083-73437102 | Msa0223770:intron | 45.0% | |
| ! | GGTAGTGCAACACTGTGTTT+TGG | - | chr2_1:73437257-73437276 | Msa0223770:intron | 45.0% |
| !!! | CTGTGTTTTGGTCAACGACT+AGG | - | chr2_1:73437269-73437288 | Msa0223770:intron | 45.0% |
| GTGAATGAGTTTACCAGCTC+TGG | - | chr2_1:73437419-73437438 | Msa0223770:intron | 45.0% | |
| AAATGAACTACTCACCCAGC+AGG | + | chr2_1:73437585-73437604 | None:intergenic | 45.0% | |
| CACAGAGTCCCCTAAGATTT+AGG | + | chr2_1:73437618-73437637 | None:intergenic | 45.0% | |
| ! | TACTTGGTTCTTTCCAGGAG+TGG | - | chr2_1:73437675-73437694 | Msa0223770:intron | 45.0% |
| ! | ACTTGGTTCTTTCCAGGAGT+GGG | - | chr2_1:73437676-73437695 | Msa0223770:intron | 45.0% |
| GTTAGTAATGTCCCCTGTTG+TGG | - | chr2_1:73437761-73437780 | Msa0223770:intron | 45.0% | |
| CAAACCTGCAGACAAACACT+TGG | + | chr2_1:73438088-73438107 | None:intergenic | 45.0% | |
| AGTGATAGGGTTGTTCCGAT+GGG | + | chr2_1:73438696-73438715 | None:intergenic | 45.0% | |
| AAGTGATAGGGTTGTTCCGA+TGG | + | chr2_1:73438697-73438716 | None:intergenic | 45.0% | |
| TCGGAACAACCCTATCACTT+AGG | - | chr2_1:73438697-73438716 | Msa0223770:intron | 45.0% | |
| ! | GTTAGCTTCGCCTAAGTGAT+AGG | + | chr2_1:73438710-73438729 | None:intergenic | 45.0% |
| TCTGACCCTCATTGAAAAGG+TGG | - | chr2_1:73438731-73438750 | Msa0223770:intron | 45.0% | |
| CTGACCCTCATTGAAAAGGT+GGG | - | chr2_1:73438732-73438751 | Msa0223770:intron | 45.0% | |
| !! | TTTCTTTTGGGGGAGAAGGA+GGG | + | chr2_1:73438790-73438809 | None:intergenic | 45.0% |
| !! | TTTTCTTTTGGGGGAGAAGG+AGG | + | chr2_1:73438791-73438810 | None:intergenic | 45.0% |
| ! | AGCTTTTGTAGCTCAGATGC+AGG | - | chr2_1:73439069-73439088 | Msa0223770:CDS | 45.0% |
| !!! | AACTAATATTTTTTAAATAT+TGG | - | chr2_1:73438842-73438861 | Msa0223770:intron | 5.0% |
| GCAACATGGTTCCACATCGT+GGG | + | chr2_1:73434997-73435016 | None:intergenic | 50.0% | |
| CACTCCTCAGTCAGACTCAA+TGG | - | chr2_1:73435176-73435195 | Msa0223770:intron | 50.0% | |
| CATTGAGATGGTGCCTACAG+TGG | + | chr2_1:73435230-73435249 | None:intergenic | 50.0% | |
| ! | TCGAGGCTATGGCATTGAGA+TGG | + | chr2_1:73435242-73435261 | None:intergenic | 50.0% |
| CTCAAACTTGGTCGAGGCTA+TGG | + | chr2_1:73435253-73435272 | None:intergenic | 50.0% | |
| CATAGCCTCGACCAAGTTTG+AGG | - | chr2_1:73435251-73435270 | Msa0223770:intron | 50.0% | |
| CAAGCTTCAACAAGGGCCAT+TGG | - | chr2_1:73436044-73436063 | Msa0223770:intron | 50.0% | |
| TCAACAAGGGCCATTGGAGA+TGG | - | chr2_1:73436050-73436069 | Msa0223770:intron | 50.0% | |
| CTTCCCAAGACCATCTCCAA+TGG | + | chr2_1:73436063-73436082 | None:intergenic | 50.0% | |
| ! | CAGGAGCAGCTCTAACTGTT+TGG | - | chr2_1:73436138-73436157 | Msa0223770:intron | 50.0% |
| TGGACCTGTCTTGAGCAGTT+TGG | - | chr2_1:73436158-73436177 | Msa0223770:intron | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | + | chr2_1:73436251-73436270 | None:intergenic | 50.0% | |
| CCGTGCGGATGATATGGAAA+GGG | + | chr2_1:73436501-73436520 | None:intergenic | 50.0% | |
| CCCTTTCCATATCATCCGCA+CGG | - | chr2_1:73436498-73436517 | Msa0223770:intron | 50.0% | |
| ACCGTGCGGATGATATGGAA+AGG | + | chr2_1:73436502-73436521 | None:intergenic | 50.0% | |
| GTGTTACCGTGCGGATGATA+TGG | + | chr2_1:73436507-73436526 | None:intergenic | 50.0% | |
| ! | GGCTAACATTTGCTGGGACA+TGG | - | chr2_1:73436587-73436606 | Msa0223770:intron | 50.0% |
| GCCCACTAACACAGCATTTC+TGG | + | chr2_1:73436633-73436652 | None:intergenic | 50.0% | |
| GTCACCAGGCTAGAGAAGAA+AGG | + | chr2_1:73436727-73436746 | None:intergenic | 50.0% | |
| TTCTCTAGCCTGGTGACAGT+TGG | - | chr2_1:73436730-73436749 | Msa0223770:intron | 50.0% | |
| TACCTAGAGATCAGGGACTG+CGG | + | chr2_1:73436828-73436847 | None:intergenic | 50.0% | |
| GTGGATAGCCCAATGGATGT+TGG | + | chr2_1:73437034-73437053 | None:intergenic | 50.0% | |
| !! | CTCGATAGTGGATAGCCCAA+TGG | + | chr2_1:73437041-73437060 | None:intergenic | 50.0% |
| CTATCCACTATCGAGTCACC+CGG | - | chr2_1:73437046-73437065 | Msa0223770:intron | 50.0% | |
| TATCCACTATCGAGTCACCC+GGG | - | chr2_1:73437047-73437066 | Msa0223770:intron | 50.0% | |
| ! | AGAAAATCTGGAGCGTGACC+CGG | + | chr2_1:73437068-73437087 | None:intergenic | 50.0% |
| ! | ACGCTCCAGATTTTCTGTCC+TGG | - | chr2_1:73437072-73437091 | Msa0223770:intron | 50.0% |
| TTCTGTCCTGGTGTGAAGAG+GGG | - | chr2_1:73437084-73437103 | Msa0223770:intron | 50.0% | |
| ATGGCTTCTAGGCTATCCAG+TGG | - | chr2_1:73437992-73438011 | Msa0223770:intron | 50.0% | |
| TTGCCGAACAGATACACCAC+TGG | + | chr2_1:73438011-73438030 | None:intergenic | 50.0% | |
| AGTGGTGTATCTGTTCGGCA+AGG | - | chr2_1:73438010-73438029 | Msa0223770:intron | 50.0% | |
| CTCCAGCATGTAGTGTGTTC+CGG | - | chr2_1:73438180-73438199 | Msa0223770:CDS | 50.0% | |
| GTGTTCCGGTCCGGAAATAA+AGG | - | chr2_1:73438194-73438213 | Msa0223770:CDS | 50.0% | |
| !! | TGGGGTATTGAAGCCCTAGA+AGG | + | chr2_1:73438677-73438696 | None:intergenic | 50.0% |
| CTAGGGCTTCAATACCCCAT+CGG | - | chr2_1:73438678-73438697 | Msa0223770:intron | 50.0% | |
| GTGATAGGGTTGTTCCGATG+GGG | + | chr2_1:73438695-73438714 | None:intergenic | 50.0% | |
| GGAAAAGGTAAGGGGTGACT+TGG | - | chr2_1:73438753-73438772 | Msa0223770:intron | 50.0% | |
| !! | TTCTTTTGGGGGAGAAGGAG+GGG | + | chr2_1:73438789-73438808 | None:intergenic | 50.0% |
| TAGCTCAGATGCAGGCAAAG+TGG | - | chr2_1:73439077-73439096 | Msa0223770:CDS | 50.0% | |
| AGCTCAGATGCAGGCAAAGT+GGG | - | chr2_1:73439078-73439097 | Msa0223770:CDS | 50.0% | |
| CTTCCTCAGTACTTCCCACA+TGG | - | chr2_1:73439345-73439364 | Msa0223770:CDS | 50.0% | |
| !! | AGTCCATGTGGGAAGTACTG+AGG | + | chr2_1:73439351-73439370 | None:intergenic | 50.0% |
| ACATGGTTCCACATCGTGGG+CGG | + | chr2_1:73434994-73435013 | None:intergenic | 55.0% | |
| GGCAACATGGTTCCACATCG+TGG | + | chr2_1:73434998-73435017 | None:intergenic | 55.0% | |
| !! | GACACGTGGCTTGCTACGAT+TGG | + | chr2_1:73435852-73435871 | None:intergenic | 55.0% |
| GCCAGTAAAAACGCGACACG+TGG | - | chr2_1:73435933-73435952 | Msa0223770:intron | 55.0% | |
| ! | GCCACGTGTCGCGTTTTTAC+TGG | + | chr2_1:73435937-73435956 | None:intergenic | 55.0% |
| AAAACGCGACACGTGGCGTT+CGG | - | chr2_1:73435940-73435959 | Msa0223770:intron | 55.0% | |
| AGGGCCATTGGAGATGGTCT+TGG | - | chr2_1:73436056-73436075 | Msa0223770:intron | 55.0% | |
| GGGCCATTGGAGATGGTCTT+GGG | - | chr2_1:73436057-73436076 | Msa0223770:intron | 55.0% | |
| ! | CCATCTGCTACTGCTGCTTC+AGG | + | chr2_1:73436212-73436231 | None:intergenic | 55.0% |
| CCTGAAGCAGCAGTAGCAGA+TGG | - | chr2_1:73436209-73436228 | Msa0223770:intron | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr2_1:73436247-73436266 | None:intergenic | 55.0% | |
| GGTCAATTATACCGGGACGG+AGG | - | chr2_1:73436446-73436465 | Msa0223770:intron | 55.0% | |
| ! | GCTGGGACATGGATTGCCAA+TGG | - | chr2_1:73436598-73436617 | Msa0223770:intron | 55.0% |
| TAGAGATCAGGGACTGCGGA+AGG | + | chr2_1:73436824-73436843 | None:intergenic | 55.0% | |
| TTCCGCAGTCCCTGATCTCT+AGG | - | chr2_1:73436823-73436842 | Msa0223770:intron | 55.0% | |
| ! | GAAAATCTGGAGCGTGACCC+GGG | + | chr2_1:73437067-73437086 | None:intergenic | 55.0% |
| TCTGTCCTGGTGTGAAGAGG+GGG | - | chr2_1:73437085-73437104 | Msa0223770:intron | 55.0% | |
| !! | CAGCTCTGGCCCATTTTCTG+CGG | - | chr2_1:73437433-73437452 | Msa0223770:intron | 55.0% |
| GACCGGAACACACTACATGC+TGG | + | chr2_1:73438185-73438204 | None:intergenic | 55.0% | |
| GCATGTAGTGTGTTCCGGTC+CGG | - | chr2_1:73438185-73438204 | Msa0223770:CDS | 55.0% | |
| !! | TCTTTTGGGGGAGAAGGAGG+GGG | + | chr2_1:73438788-73438807 | None:intergenic | 55.0% |
| CATGGTTCCACATCGTGGGC+GGG | + | chr2_1:73434993-73435012 | None:intergenic | 60.0% | |
| ! | GCTTGCTACGATTGGCTGGC+AGG | + | chr2_1:73435844-73435863 | None:intergenic | 60.0% |
| !! | CGTGGCTTGCTACGATTGGC+TGG | + | chr2_1:73435848-73435867 | None:intergenic | 60.0% |
| GCGTGAGATACATGCGCCCT+CGG | + | chr2_1:73435903-73435922 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr2_1:73436248-73436267 | None:intergenic | 60.0% | |
| AGGGACTGCGGAAGGCAATC+TGG | + | chr2_1:73436816-73436835 | None:intergenic | 60.0% | |
| TGACCCGGGTGACTCGATAG+TGG | + | chr2_1:73437053-73437072 | None:intergenic | 60.0% | |
| CAACACCCCCTCTTCACACC+AGG | + | chr2_1:73437093-73437112 | None:intergenic | 60.0% | |
| CGCAGAAAATGGGCCAGAGC+TGG | + | chr2_1:73437435-73437454 | None:intergenic | 60.0% | |
| GGCACAGCCCGCCCACGATG+TGG | - | chr2_1:73434983-73435002 | Msa0223770:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 73433423 | 73439440 | 73433423 | ID=Msa0223770;Name=Msa0223770 |
| chr2_1 | mRNA | 73433423 | 73439440 | 73433423 | ID=Msa0223770-mRNA-1;Parent=Msa0223770;Name=Msa0223770-mRNA-1;_AED=0.35;_eAED=0.35;_QI=62|0.83|0.85|1|0.5|0.57|7|219|262 |
| chr2_1 | exon | 73433423 | 73433589 | 73433423 | ID=Msa0223770-mRNA-1:exon:21586;Parent=Msa0223770-mRNA-1 |
| chr2_1 | exon | 73433637 | 73433848 | 73433637 | ID=Msa0223770-mRNA-1:exon:21585;Parent=Msa0223770-mRNA-1 |
| chr2_1 | exon | 73434321 | 73434365 | 73434321 | ID=Msa0223770-mRNA-1:exon:21584;Parent=Msa0223770-mRNA-1 |
| chr2_1 | exon | 73434761 | 73434871 | 73434761 | ID=Msa0223770-mRNA-1:exon:21583;Parent=Msa0223770-mRNA-1 |
| chr2_1 | exon | 73438034 | 73438230 | 73438034 | ID=Msa0223770-mRNA-1:exon:21582;Parent=Msa0223770-mRNA-1 |
| chr2_1 | exon | 73439020 | 73439192 | 73439020 | ID=Msa0223770-mRNA-1:exon:21581;Parent=Msa0223770-mRNA-1 |
| chr2_1 | exon | 73439276 | 73439440 | 73439276 | ID=Msa0223770-mRNA-1:exon:21580;Parent=Msa0223770-mRNA-1 |
| chr2_1 | five_prime_UTR | 73439379 | 73439440 | 73439379 | ID=Msa0223770-mRNA-1:five_prime_utr;Parent=Msa0223770-mRNA-1 |
| chr2_1 | CDS | 73439276 | 73439378 | 73439276 | ID=Msa0223770-mRNA-1:cds;Parent=Msa0223770-mRNA-1 |
| chr2_1 | CDS | 73439020 | 73439192 | 73439020 | ID=Msa0223770-mRNA-1:cds;Parent=Msa0223770-mRNA-1 |
| chr2_1 | CDS | 73438034 | 73438230 | 73438034 | ID=Msa0223770-mRNA-1:cds;Parent=Msa0223770-mRNA-1 |
| chr2_1 | CDS | 73434761 | 73434871 | 73434761 | ID=Msa0223770-mRNA-1:cds;Parent=Msa0223770-mRNA-1 |
| chr2_1 | CDS | 73434321 | 73434365 | 73434321 | ID=Msa0223770-mRNA-1:cds;Parent=Msa0223770-mRNA-1 |
| chr2_1 | CDS | 73433689 | 73433848 | 73433689 | ID=Msa0223770-mRNA-1:cds;Parent=Msa0223770-mRNA-1 |
| chr2_1 | three_prime_UTR | 73433637 | 73433688 | 73433637 | ID=Msa0223770-mRNA-1:three_prime_utr;Parent=Msa0223770-mRNA-1 |
| chr2_1 | three_prime_UTR | 73433423 | 73433589 | 73433423 | ID=Msa0223770-mRNA-1:three_prime_utr;Parent=Msa0223770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
