AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0594530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0594530 MtrunA17_Chr2g0286021 100.000 27 0 0 1 27 1 27 6.22e-13 63.2
Msa0594530 MtrunA17_Chr7g0218571 72.973 37 10 0 65 101 75 111 3.17e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 115 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACCATAAGTTTAGGCTTT+AGG 0.170885 4_2:+22515147 Msa0594530:three_prime_UTR
TCTTTCCAGCCAACAAATTT+AGG 0.187535 4_2:+22517065 Msa0594530:three_prime_UTR
AACCATAAGTTTAGGCTTTA+GGG 0.213110 4_2:+22515148 Msa0594530:three_prime_UTR
AAGCTATATTGTAGGGTATA+TGG 0.229586 4_2:+22515238 Msa0594530:three_prime_UTR
GACTTGTTTGGTGTAAATTA+AGG 0.241182 4_2:+22515487 Msa0594530:three_prime_UTR
TTCAAATAAGTTAATCTAAA+AGG 0.250881 4_2:+22515352 Msa0594530:three_prime_UTR
GCTTTAGTTCAAATTGCTTT+TGG 0.254423 4_2:+22514022 Msa0594530:three_prime_UTR
GGAGAAAATTGAGTACCTTT+TGG 0.281512 4_2:+22515508 Msa0594530:three_prime_UTR
GGAGTACTCCTTCAGGCTTA+TGG 0.286052 4_2:+22515584 Msa0594530:three_prime_UTR
ACTGCTATTATTATCATGTT+TGG 0.291212 4_2:+22514363 Msa0594530:three_prime_UTR
ATCCCTAAAGCCTAAACTTA+TGG 0.300096 4_2:-22515150 None:intergenic
GGAAGAAGGTTGGAGAGTTT+TGG 0.300993 4_2:+22514654 Msa0594530:three_prime_UTR
TCGCCCTCGTTCTTTCTTCA+AGG 0.310085 4_2:+22512852 Msa0594530:CDS
CTTGCTGATCCTAAATTTGT+TGG 0.321349 4_2:-22517074 None:intergenic
CTGCATGTATTGCAGCTCTA+TGG 0.327181 4_2:-22516810 None:intergenic
GTTCTAAAACAATGATTTGT+TGG 0.332699 4_2:-22517013 None:intergenic
TACGCCACTATCTAAATTGC+AGG 0.347216 4_2:+22514271 Msa0594530:three_prime_UTR
CAGTTAGGACCGAGGCTTCT+TGG 0.352101 4_2:+22513795 Msa0594530:CDS
AGCGGCTGGTGTGTCGGTTT+TGG 0.352405 4_2:+22513659 Msa0594530:CDS
TTCTATTGCATGGCTAAGTA+TGG 0.352654 4_2:+22514721 Msa0594530:three_prime_UTR
ACCACGAAGTCCGATCCTTC+AGG 0.362970 4_2:-22516730 None:intergenic
AACATACACATAAAATTTGC+AGG 0.374225 4_2:-22514598 None:intergenic
TTCCAAAACCAAAACACTAT+TGG 0.388360 4_2:-22517169 None:intergenic
AAAGCCATGTTTATGCAGTT+AGG 0.403852 4_2:+22513780 Msa0594530:CDS
CCTCGTTCTTTCTTCAAGGT+TGG 0.406404 4_2:+22512856 Msa0594530:CDS
TTACGAGAACTTATAGAAAC+AGG 0.407103 4_2:-22515296 None:intergenic
CAGCATTGGAGTACTCCTTC+AGG 0.411265 4_2:+22515577 Msa0594530:three_prime_UTR
AGTGGAGTTGTTAGTGGACT+TGG 0.412473 4_2:+22515536 Msa0594530:three_prime_UTR
CTGATCCTAAATTTGTTGGC+TGG 0.413881 4_2:-22517070 None:intergenic
GAAGTCCACAGTTGCCGATC+AGG 0.414976 4_2:+22514936 Msa0594530:three_prime_UTR
TAGGACCGAGGCTTCTTGGC+AGG 0.415660 4_2:+22513799 Msa0594530:CDS
GAGACAAGTGGAGTTGTTAG+TGG 0.419382 4_2:+22515530 Msa0594530:three_prime_UTR
ATGGTTCCACCATTTGTGTT+GGG 0.424035 4_2:-22516791 None:intergenic
TTGGCAGGGTTGACGATTCA+AGG 0.427680 4_2:+22513814 Msa0594530:CDS
GCAGCTGAAGAGGACTTGTT+TGG 0.442244 4_2:+22515475 Msa0594530:three_prime_UTR
TGCTGAGCTCTATAAATAAG+AGG 0.444835 4_2:-22514218 None:intergenic
CACTCTCCAAGCTATATTGT+AGG 0.446308 4_2:+22515230 Msa0594530:three_prime_UTR
TGCTGTTCTGTTATGACAGC+AGG 0.447721 4_2:-22513607 None:intergenic
TATGGTTCCACCATTTGTGT+TGG 0.455098 4_2:-22516792 None:intergenic
GGAGTTACTGCTAGCAGCAT+TGG 0.459197 4_2:+22515563 Msa0594530:three_prime_UTR
TGATATGCTGTAGCAGTTGT+TGG 0.463306 4_2:+22515121 Msa0594530:three_prime_UTR
AGCTATATTGTAGGGTATAT+GGG 0.463513 4_2:+22515239 Msa0594530:three_prime_UTR
GAAAGAACGAGGGCGAAACT+TGG 0.463754 4_2:-22512845 None:intergenic
ATTCATAATGAAGTGAATAC+CGG 0.464662 4_2:+22513953 Msa0594530:CDS
TCTGTAGGCTGTGCAGCGGC+TGG 0.469312 4_2:+22513645 Msa0594530:CDS
TAGTATCTTTGCACCGGTAG+TGG 0.471506 4_2:+22513998 Msa0594530:exon
CAGTGGCTTCACTCATGCTC+AGG 0.473741 4_2:+22515674 Msa0594530:three_prime_UTR
CAACTCCACTTGTCTCCAAA+AGG 0.476312 4_2:-22515523 None:intergenic
GCTGTTGGTGCTGTTTCTGT+AGG 0.479485 4_2:+22513630 Msa0594530:CDS
TCCTGAAGGATCGGACTTCG+TGG 0.492081 4_2:+22516729 Msa0594530:three_prime_UTR
AAAGTGATAAATGAATAAGA+TGG 0.492984 4_2:+22515070 Msa0594530:three_prime_UTR
ATAACCTGCAATTTAGATAG+TGG 0.495770 4_2:-22514275 None:intergenic
TTGGTTACAACCATAAGTTT+AGG 0.503324 4_2:+22515140 Msa0594530:three_prime_UTR
ATTGTCCTTCCCAACACAAA+TGG 0.508396 4_2:+22516782 Msa0594530:three_prime_UTR
TCCATGCGGAAATGGGAAGA+AGG 0.514677 4_2:+22514640 Msa0594530:three_prime_UTR
GCATTAGAATCTGACACTGC+AGG 0.515006 4_2:-22514828 None:intergenic
GCTCAGCAAATGAAAGTTAG+TGG 0.517412 4_2:+22514233 Msa0594530:three_prime_UTR
AAACTTTCGCGAAAGGCACT+CGG 0.518788 4_2:-22514886 None:intergenic
GAGAACTCAAATGAAAGATA+AGG 0.519927 4_2:-22514317 None:intergenic
AAGTGATAAATGAATAAGAT+GGG 0.522280 4_2:+22515071 Msa0594530:three_prime_UTR
TGCGGAAATGGGAAGAAGGT+TGG 0.524281 4_2:+22514644 Msa0594530:three_prime_UTR
GTTGTTAGTGGACTTGGGAA+AGG 0.528717 4_2:+22515542 Msa0594530:three_prime_UTR
TGCGTTTCGATCTTGTTCCC+CGG 0.532113 4_2:-22513972 None:intergenic
AAGACTATATTGTCAAAAGA+AGG 0.532861 4_2:-22514474 None:intergenic
AGGACCGAGGCTTCTTGGCA+GGG 0.533687 4_2:+22513800 Msa0594530:CDS
CTGTGCAGCGGCTGGTGTGT+CGG 0.534067 4_2:+22513653 Msa0594530:CDS
ATATACCCTACAATATAGCT+TGG 0.536716 4_2:-22515236 None:intergenic
TTCCACCATTTGTGTTGGGA+AGG 0.538380 4_2:-22516787 None:intergenic
TTCGTGGTATCGTGATAGCC+AGG 0.540887 4_2:+22516745 Msa0594530:three_prime_UTR
ATAAACTAACTTCTATTGCA+TGG 0.542096 4_2:+22514711 Msa0594530:three_prime_UTR
TCTGGAGTAGGGCAGAGACT+TGG 0.544052 4_2:-22512800 None:intergenic
ACAACTGCTACAGCATATCA+TGG 0.544123 4_2:-22515118 None:intergenic
TTCATAATGAAGTGAATACC+GGG 0.553640 4_2:+22513954 Msa0594530:CDS
ATGAACCTGATCGGCAACTG+TGG 0.556047 4_2:-22514941 None:intergenic
TAATGACTATAAATGCACTC+TGG 0.559994 4_2:+22514541 Msa0594530:three_prime_UTR
CAATTTAGATAGTGGCGTAA+AGG 0.562740 4_2:-22514267 None:intergenic
GAGAGTTAAACTTTCGCGAA+AGG 0.563012 4_2:-22514893 None:intergenic
ACTCTCCAAGCTATATTGTA+GGG 0.569220 4_2:+22515231 Msa0594530:three_prime_UTR
TGGCAGGGTTGACGATTCAA+GGG 0.571112 4_2:+22513815 Msa0594530:CDS
CAAACTGGCAGCACCTATCA+CGG 0.572986 4_2:-22513682 None:intergenic
TTGAACTAAAGCACCACTAC+CGG 0.574563 4_2:-22514011 None:intergenic
TCAACCCTGCCAAGAAGCCT+CGG 0.575981 4_2:-22513804 None:intergenic
GTATCGTGATAGCCAGGCTG+TGG 0.577136 4_2:+22516751 Msa0594530:three_prime_UTR
ATCGAAATCCATAAGCCTGA+AGG 0.582144 4_2:-22515592 None:intergenic
CATAGGATAAGCAGCTGAAG+AGG 0.583093 4_2:+22515465 Msa0594530:three_prime_UTR
CAGGCGAAAACCGAAACCAC+AGG 0.584676 4_2:-22513588 None:intergenic
CGGTCCTAACTGCATAAACA+TGG 0.587699 4_2:-22513784 None:intergenic
ACCTTCTTCCCATTTCCGCA+TGG 0.587749 4_2:-22514641 None:intergenic
GTGGAGTTGTTAGTGGACTT+GGG 0.588312 4_2:+22515537 Msa0594530:three_prime_UTR
GTCCTTCCCAACACAAATGG+TGG 0.593510 4_2:+22516785 Msa0594530:three_prime_UTR
CTCAGCAAATGAAAGTTAGT+GGG 0.593841 4_2:+22514234 Msa0594530:three_prime_UTR
CATTAGAATCTGACACTGCA+GGG 0.594106 4_2:-22514827 None:intergenic
CATAGAGCTGCAATACATGC+AGG 0.594541 4_2:+22516811 Msa0594530:three_prime_UTR
AAGTTAATCTAAAAGGAATG+AGG 0.596998 4_2:+22515359 Msa0594530:three_prime_UTR
AAAAGTGAAATGAACCTGAT+CGG 0.598666 4_2:-22514950 None:intergenic
CATGGCTAAGTATGGCAAAG+TGG 0.599899 4_2:+22514729 Msa0594530:three_prime_UTR
TTGCAGATATCCTGAAGGAT+CGG 0.600491 4_2:+22516720 Msa0594530:three_prime_UTR
GCAACTTAGTATCTTTGCAC+CGG 0.601933 4_2:+22513992 Msa0594530:exon
CATAACAGAACAGCAGCTGT+TGG 0.608552 4_2:+22513615 Msa0594530:CDS
ATATGAAAGACTATACAACT+TGG 0.609818 4_2:-22514439 None:intergenic
CAATCATTATATCCACAGCC+TGG 0.623559 4_2:-22516763 None:intergenic
ACAGGTTGCAGATATCCTGA+AGG 0.627860 4_2:+22516715 Msa0594530:intron
AATGAAAGTTAGTGGGTGCG+TGG 0.628150 4_2:+22514241 Msa0594530:three_prime_UTR
GTTCAGCATTCAATCTACTG+TGG 0.633099 4_2:-22514567 None:intergenic
AATTTAGGATCAGCAAGAGA+TGG 0.634057 4_2:+22517080 Msa0594530:three_prime_UTR
GATGAGATCAGTGTCTACAA+TGG 0.634391 4_2:+22515630 Msa0594530:three_prime_UTR
TGTTTATGCAGTTAGGACCG+AGG 0.648761 4_2:+22513787 Msa0594530:CDS
ATGGCTAAGTATGGCAAAGT+GGG 0.656929 4_2:+22514730 Msa0594530:three_prime_UTR
GAAAGTTAGTGGGTGCGTGG+AGG 0.661324 4_2:+22514244 Msa0594530:three_prime_UTR
CTAATTGTGATTCTAGACCT+CGG 0.667604 4_2:-22514758 None:intergenic
CCAACCTTGAAGAAAGAACG+AGG 0.679370 4_2:-22512856 None:intergenic
CAACCTTGAAGAAAGAACGA+GGG 0.685781 4_2:-22512855 None:intergenic
TGTTTCTGTAGGCTGTGCAG+CGG 0.701103 4_2:+22513641 Msa0594530:CDS
TGGCAAAGTGGGCTGCACCG+AGG 0.735778 4_2:+22514741 Msa0594530:three_prime_UTR
TCATAATGAAGTGAATACCG+GGG 0.737007 4_2:+22513955 Msa0594530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTATAATAAGATAATTGAAT+AGG - chr4_2:22512889-22512908 None:intergenic 15.0%
!! AAACATTGAATTAATAAATG+AGG - chr4_2:22513008-22513027 None:intergenic 15.0%
!!! AATTCAATGTTTTTAGTTTT+TGG + chr4_2:22513016-22513035 Msa0594530:intron 15.0%
!!! ATTCAATGTTTTTAGTTTTT+GGG + chr4_2:22513017-22513036 Msa0594530:intron 15.0%
!! AAAATGTATTTAATACAAGA+CGG - chr4_2:22513475-22513494 None:intergenic 15.0%
!! AAAACAAAAAATCAATTTGA+AGG - chr4_2:22514409-22514428 None:intergenic 15.0%
!!! GATTTTTTGTTTTTTTGTTT+TGG + chr4_2:22514416-22514435 Msa0594530:three_prime_UTR 15.0%
!! TTCAAATAAGTTAATCTAAA+AGG + chr4_2:22515352-22515371 Msa0594530:three_prime_UTR 15.0%
!! AAAATAAAAACAAAGTTCTA+AGG + chr4_2:22516218-22516237 Msa0594530:intron 15.0%
!!! TAGAACTTTGTTTTTATTTT+AGG - chr4_2:22516218-22516237 None:intergenic 15.0%
!! AAAATAAAAACAAAGTTCTA+AGG + chr4_2:22516218-22516237 Msa0594530:intron 15.0%
!! ATAAGATAATTGAATAGGAA+AGG - chr4_2:22512884-22512903 None:intergenic 20.0%
!! TTCAGCTTAATTAGTAATAT+TGG + chr4_2:22513229-22513248 Msa0594530:intron 20.0%
!! TCAGCTTAATTAGTAATATT+GGG + chr4_2:22513230-22513249 Msa0594530:intron 20.0%
!! AAGAAAGAAAGTGATAAAAT+CGG - chr4_2:22513379-22513398 None:intergenic 20.0%
!! ACCATTAATGTAAAAATTAG+GGG - chr4_2:22513902-22513921 None:intergenic 20.0%
!! CACCATTAATGTAAAAATTA+GGG - chr4_2:22513903-22513922 None:intergenic 20.0%
!!! TATTTTATTTGTGTGACTAA+AGG + chr4_2:22514070-22514089 Msa0594530:intron 20.0%
!! TTTAATATAAAACAAGCTAC+TGG - chr4_2:22514138-22514157 None:intergenic 20.0%
!! AAAGTGATAAATGAATAAGA+TGG + chr4_2:22515070-22515089 Msa0594530:three_prime_UTR 20.0%
!! AAGTGATAAATGAATAAGAT+GGG + chr4_2:22515071-22515090 Msa0594530:three_prime_UTR 20.0%
!!! TCAATTTTGTTTGTTTGTTT+TGG + chr4_2:22515173-22515192 Msa0594530:three_prime_UTR 20.0%
!!! CAATTTTGTTTGTTTGTTTT+GGG + chr4_2:22515174-22515193 Msa0594530:three_prime_UTR 20.0%
!!! AATTTTGTTTGTTTGTTTTG+GGG + chr4_2:22515175-22515194 Msa0594530:three_prime_UTR 20.0%
!! CTACTATCATTAATTCATTA+TGG - chr4_2:22515841-22515860 None:intergenic 20.0%
!!! AAATATATGAATGCATTTTC+TGG + chr4_2:22516177-22516196 Msa0594530:intron 20.0%
!!! TTGATAAATATTTTTGACAG+TGG - chr4_2:22516321-22516340 None:intergenic 20.0%
!!! TTTTGTTTTTCTGTTTTTCG+TGG + chr4_2:22512922-22512941 Msa0594530:intron 25.0%
!!! TTTGTTGTTGTTAGAATTGT+AGG + chr4_2:22512953-22512972 Msa0594530:intron 25.0%
!!! ACATTTTCTGTTTTAGTTGT+TGG + chr4_2:22513488-22513507 Msa0594530:intron 25.0%
!! ACCCCTAATTTTTACATTAA+TGG + chr4_2:22513898-22513917 Msa0594530:intron 25.0%
! GCACCATTAATGTAAAAATT+AGG - chr4_2:22513904-22513923 None:intergenic 25.0%
! ATTCATAATGAAGTGAATAC+CGG + chr4_2:22513953-22513972 Msa0594530:CDS 25.0%
! ACTGCTATTATTATCATGTT+TGG + chr4_2:22514363-22514382 Msa0594530:three_prime_UTR 25.0%
! ATATGAAAGACTATACAACT+TGG - chr4_2:22514442-22514461 None:intergenic 25.0%
! AAGACTATATTGTCAAAAGA+AGG - chr4_2:22514477-22514496 None:intergenic 25.0%
! AACATACACATAAAATTTGC+AGG - chr4_2:22514601-22514620 None:intergenic 25.0%
! ATAAACTAACTTCTATTGCA+TGG + chr4_2:22514711-22514730 Msa0594530:three_prime_UTR 25.0%
!! CAACTATTGTTGGAATTTTA+TGG + chr4_2:22514976-22514995 Msa0594530:three_prime_UTR 25.0%
! AAGTTAATCTAAAAGGAATG+AGG + chr4_2:22515359-22515378 Msa0594530:three_prime_UTR 25.0%
!! CTTATGGATTTCGATTTTAT+AGG + chr4_2:22515600-22515619 Msa0594530:three_prime_UTR 25.0%
!! TTTCGATTTTATAGGTCATT+TGG + chr4_2:22515608-22515627 Msa0594530:three_prime_UTR 25.0%
! CTATCATTAATTCATTATGG+AGG - chr4_2:22515838-22515857 None:intergenic 25.0%
! GCTTTAATTAGACAAAACAA+AGG + chr4_2:22516129-22516148 Msa0594530:intron 25.0%
!!! GTTCTAAAACAATGATTTGT+TGG - chr4_2:22517016-22517035 None:intergenic 25.0%
!!! ATTTTTAGCCAATAGTGTTT+TGG + chr4_2:22517161-22517180 Msa0594530:three_prime_UTR 25.0%
AAATATTCCAGAACATAGCA+AGG - chr4_2:22513089-22513108 None:intergenic 30.0%
TTAGTCATGCATACAATTGA+GGG - chr4_2:22513164-22513183 None:intergenic 30.0%
! TGACATGTTGTATTAGTTTG+AGG + chr4_2:22513422-22513441 Msa0594530:intron 30.0%
! GAGGTGTGATTTCTTTTATT+TGG + chr4_2:22513441-22513460 Msa0594530:intron 30.0%
TTCATAATGAAGTGAATACC+GGG + chr4_2:22513954-22513973 Msa0594530:CDS 30.0%
!! GCTTTAGTTCAAATTGCTTT+TGG + chr4_2:22514022-22514041 Msa0594530:three_prime_UTR 30.0%
CTGGTGAATTATCATATAAG+TGG - chr4_2:22514193-22514212 None:intergenic 30.0%
CTTATATGATAATTCACCAG+TGG + chr4_2:22514193-22514212 Msa0594530:intron 30.0%
ATAACCTGCAATTTAGATAG+TGG - chr4_2:22514278-22514297 None:intergenic 30.0%
GAGAACTCAAATGAAAGATA+AGG - chr4_2:22514320-22514339 None:intergenic 30.0%
TAATGACTATAAATGCACTC+TGG + chr4_2:22514541-22514560 Msa0594530:three_prime_UTR 30.0%
!!! GTGCTAATTTTTTTTCCATG+CGG + chr4_2:22514626-22514645 Msa0594530:three_prime_UTR 30.0%
!!! ATTTTTTTTCCATGCGGAAA+TGG + chr4_2:22514632-22514651 Msa0594530:three_prime_UTR 30.0%
!!! TTTTTTTTCCATGCGGAAAT+GGG + chr4_2:22514633-22514652 Msa0594530:three_prime_UTR 30.0%
AAAAGTGAAATGAACCTGAT+CGG - chr4_2:22514953-22514972 None:intergenic 30.0%
! CACTTTTATGCAACTATTGT+TGG + chr4_2:22514966-22514985 Msa0594530:three_prime_UTR 30.0%
TTGGTTACAACCATAAGTTT+AGG + chr4_2:22515140-22515159 Msa0594530:three_prime_UTR 30.0%
AACCATAAGTTTAGGCTTTA+GGG + chr4_2:22515148-22515167 Msa0594530:three_prime_UTR 30.0%
ATATACCCTACAATATAGCT+TGG - chr4_2:22515239-22515258 None:intergenic 30.0%
AAGCTATATTGTAGGGTATA+TGG + chr4_2:22515238-22515257 Msa0594530:three_prime_UTR 30.0%
AGCTATATTGTAGGGTATAT+GGG + chr4_2:22515239-22515258 Msa0594530:three_prime_UTR 30.0%
TTACGAGAACTTATAGAAAC+AGG - chr4_2:22515299-22515318 None:intergenic 30.0%
!! TTGTTTTGTGCATTTTGCAT+AGG + chr4_2:22515448-22515467 Msa0594530:three_prime_UTR 30.0%
!! GACTTGTTTGGTGTAAATTA+AGG + chr4_2:22515487-22515506 Msa0594530:three_prime_UTR 30.0%
GAAATGTACAGCTTATGTAT+AGG + chr4_2:22515878-22515897 Msa0594530:intron 30.0%
TGTCACATTTGCATATTTGT+TGG + chr4_2:22515915-22515934 Msa0594530:intron 30.0%
CTACAAAACTAGAGAATCAT+TGG - chr4_2:22516000-22516019 None:intergenic 30.0%
!!! TGATTCTCTAGTTTTGTAGA+TGG + chr4_2:22516001-22516020 Msa0594530:intron 30.0%
!!! GATTCTCTAGTTTTGTAGAT+GGG + chr4_2:22516002-22516021 Msa0594530:intron 30.0%
TAAAAGACCAAATGTTAGCA+GGG - chr4_2:22516038-22516057 None:intergenic 30.0%
ATAAAAGACCAAATGTTAGC+AGG - chr4_2:22516039-22516058 None:intergenic 30.0%
!! CTAACATTTGGTCTTTTATG+TGG + chr4_2:22516040-22516059 Msa0594530:intron 30.0%
!!! TTTTGTGTTGTTTGCACATA+CGG + chr4_2:22516086-22516105 Msa0594530:intron 30.0%
TAGACAAAACAAAGGCTTAA+TGG + chr4_2:22516137-22516156 Msa0594530:intron 30.0%
! AAACAAAGGCTTAATGGTTT+TGG + chr4_2:22516143-22516162 Msa0594530:intron 30.0%
!!! ATGAATGCATTTTCTGGTTT+AGG + chr4_2:22516183-22516202 Msa0594530:intron 30.0%
!! TTTCTGGTTTAGGTGTATAT+AGG + chr4_2:22516193-22516212 Msa0594530:intron 30.0%
! TATTTCTAACGTACTTGATG+CGG - chr4_2:22516374-22516393 None:intergenic 30.0%
ATACTTTCTTGACTGAAAGA+TGG - chr4_2:22516896-22516915 None:intergenic 30.0%
!! TAAAACAATGATTTGTTGGC+TGG - chr4_2:22517012-22517031 None:intergenic 30.0%
TTCCAAAACCAAAACACTAT+TGG - chr4_2:22517172-22517191 None:intergenic 30.0%
!!! TCAACATCTTTTCTGGAGTA+GGG - chr4_2:22512814-22512833 None:intergenic 35.0%
! ATCGTAGTCAACATCTTTTC+TGG - chr4_2:22512821-22512840 None:intergenic 35.0%
GCTAAGAAATTGTGACAGTA+GGG - chr4_2:22513056-22513075 None:intergenic 35.0%
AGCTAAGAAATTGTGACAGT+AGG - chr4_2:22513057-22513076 None:intergenic 35.0%
! ATTAGTTCCTTGCTATGTTC+TGG + chr4_2:22513079-22513098 Msa0594530:intron 35.0%
GTTAGTCATGCATACAATTG+AGG - chr4_2:22513165-22513184 None:intergenic 35.0%
TGAGATGAGATGAGGTAATA+AGG + chr4_2:22513200-22513219 Msa0594530:intron 35.0%
GAGATGAGATGAGGTAATAA+GGG + chr4_2:22513201-22513220 Msa0594530:intron 35.0%
CAAATACTAATTTCTCGAGC+TGG - chr4_2:22513337-22513356 None:intergenic 35.0%
TTAGTTGTTGGATGACGTAA+CGG + chr4_2:22513500-22513519 Msa0594530:intron 35.0%
! TTCGCTATGGGTTTGAATTT+TGG + chr4_2:22513740-22513759 Msa0594530:intron 35.0%
AAAGCCATGTTTATGCAGTT+AGG + chr4_2:22513780-22513799 Msa0594530:CDS 35.0%
TCATAATGAAGTGAATACCG+GGG + chr4_2:22513955-22513974 Msa0594530:CDS 35.0%
CTATAAATAAGAGGATCCAC+TGG - chr4_2:22514212-22514231 None:intergenic 35.0%
TGCTGAGCTCTATAAATAAG+AGG - chr4_2:22514221-22514240 None:intergenic 35.0%
CTCAGCAAATGAAAGTTAGT+GGG + chr4_2:22514234-22514253 Msa0594530:three_prime_UTR 35.0%
! CAATTTAGATAGTGGCGTAA+AGG - chr4_2:22514270-22514289 None:intergenic 35.0%
AGCAGTCAAACAAAAATGCA+TGG - chr4_2:22514349-22514368 None:intergenic 35.0%
!!! TGGAGAGTTTTGGCTTTATT+TGG + chr4_2:22514664-22514683 Msa0594530:three_prime_UTR 35.0%
TTCTATTGCATGGCTAAGTA+TGG + chr4_2:22514721-22514740 Msa0594530:three_prime_UTR 35.0%
CTAATTGTGATTCTAGACCT+CGG - chr4_2:22514761-22514780 None:intergenic 35.0%
CAACCATAAGTTTAGGCTTT+AGG + chr4_2:22515147-22515166 Msa0594530:three_prime_UTR 35.0%
ATCCCTAAAGCCTAAACTTA+TGG - chr4_2:22515153-22515172 None:intergenic 35.0%
ACTCTCCAAGCTATATTGTA+GGG + chr4_2:22515231-22515250 Msa0594530:three_prime_UTR 35.0%
! GGAGAAAATTGAGTACCTTT+TGG + chr4_2:22515508-22515527 Msa0594530:three_prime_UTR 35.0%
TGCGTATATAGTCAACTGTA+TGG + chr4_2:22516511-22516530 Msa0594530:intron 35.0%
!! CTGCTTTTCGAGAAGTTTAT+TGG + chr4_2:22516544-22516563 Msa0594530:intron 35.0%
TTATATAGTATGCCCTACTG+TGG + chr4_2:22516569-22516588 Msa0594530:intron 35.0%
AAACCAAGCATACTCTTTAC+AGG + chr4_2:22516697-22516716 Msa0594530:intron 35.0%
TATTGACAATACTGATGCGA+AGG - chr4_2:22516945-22516964 None:intergenic 35.0%
TCTTTCCAGCCAACAAATTT+AGG + chr4_2:22517065-22517084 Msa0594530:three_prime_UTR 35.0%
CTTGCTGATCCTAAATTTGT+TGG - chr4_2:22517077-22517096 None:intergenic 35.0%
! AATTTAGGATCAGCAAGAGA+TGG + chr4_2:22517080-22517099 Msa0594530:three_prime_UTR 35.0%
!!! AGCCAATAGTGTTTTGGTTT+TGG + chr4_2:22517167-22517186 Msa0594530:three_prime_UTR 35.0%
!!! GTCAACATCTTTTCTGGAGT+AGG - chr4_2:22512815-22512834 None:intergenic 40.0%
CAACCTTGAAGAAAGAACGA+GGG - chr4_2:22512858-22512877 None:intergenic 40.0%
TGTTGTGATGAGATGAGATG+AGG + chr4_2:22513192-22513211 Msa0594530:intron 40.0%
GGGTTTAAATTCCGTGTCTT+AGG + chr4_2:22513250-22513269 Msa0594530:intron 40.0%
ACCGGCGTTAAAAGTCTTTA+GGG + chr4_2:22513278-22513297 Msa0594530:intron 40.0%
! ACCCTAAAGACTTTTAACGC+CGG - chr4_2:22513282-22513301 None:intergenic 40.0%
TTAGTATTTGTAGCTGCGTG+TGG + chr4_2:22513347-22513366 Msa0594530:intron 40.0%
TAGTATTTGTAGCTGCGTGT+GGG + chr4_2:22513348-22513367 Msa0594530:intron 40.0%
! CAACTTAACTAGTAGCCTTG+TGG + chr4_2:22513537-22513556 Msa0594530:intron 40.0%
GCAACTTAGTATCTTTGCAC+CGG + chr4_2:22513992-22514011 Msa0594530:exon 40.0%
! TTGAACTAAAGCACCACTAC+CGG - chr4_2:22514014-22514033 None:intergenic 40.0%
GCTCAGCAAATGAAAGTTAG+TGG + chr4_2:22514233-22514252 Msa0594530:three_prime_UTR 40.0%
TACGCCACTATCTAAATTGC+AGG + chr4_2:22514271-22514290 Msa0594530:three_prime_UTR 40.0%
GTTCAGCATTCAATCTACTG+TGG - chr4_2:22514570-22514589 None:intergenic 40.0%
ATGGCTAAGTATGGCAAAGT+GGG + chr4_2:22514730-22514749 Msa0594530:three_prime_UTR 40.0%
CATTAGAATCTGACACTGCA+GGG - chr4_2:22514830-22514849 None:intergenic 40.0%
GAGAGTTAAACTTTCGCGAA+AGG - chr4_2:22514896-22514915 None:intergenic 40.0%
ACAACTGCTACAGCATATCA+TGG - chr4_2:22515121-22515140 None:intergenic 40.0%
TGATATGCTGTAGCAGTTGT+TGG + chr4_2:22515121-22515140 Msa0594530:three_prime_UTR 40.0%
CACTCTCCAAGCTATATTGT+AGG + chr4_2:22515230-22515249 Msa0594530:three_prime_UTR 40.0%
ATCGAAATCCATAAGCCTGA+AGG - chr4_2:22515595-22515614 None:intergenic 40.0%
GATGAGATCAGTGTCTACAA+TGG + chr4_2:22515630-22515649 Msa0594530:three_prime_UTR 40.0%
! TTCTACACTTTTGCTCTCAG+TGG + chr4_2:22515657-22515676 Msa0594530:three_prime_UTR 40.0%
! TTGTAGCTGATTCCACTTAG+TGG + chr4_2:22515738-22515757 Msa0594530:intron 40.0%
! TGTAGCTGATTCCACTTAGT+GGG + chr4_2:22515739-22515758 Msa0594530:intron 40.0%
TGATTCCACTTAGTGGGATA+AGG + chr4_2:22515745-22515764 Msa0594530:intron 40.0%
! AAAAGCCTTATCCCACTAAG+TGG - chr4_2:22515753-22515772 None:intergenic 40.0%
AGACACTGAAAGAAGAGAAG+AGG + chr4_2:22515949-22515968 Msa0594530:intron 40.0%
GACACTGAAAGAAGAGAAGA+GGG + chr4_2:22515950-22515969 Msa0594530:intron 40.0%
!!! CTCTAGTTTTGTAGATGGGA+TGG + chr4_2:22516006-22516025 Msa0594530:intron 40.0%
!!! CAAAGGCTTAATGGTTTTGG+TGG + chr4_2:22516146-22516165 Msa0594530:intron 40.0%
GTGTTTGATGCTGCATATTG+AGG + chr4_2:22516244-22516263 Msa0594530:intron 40.0%
! AACAGTTCAGCAAACTTGCT+TGG - chr4_2:22516432-22516451 None:intergenic 40.0%
TTGTAGGTTATAGACCCACT+AGG - chr4_2:22516611-22516630 None:intergenic 40.0%
! TAGTGGGTCTATAACCTACA+AGG + chr4_2:22516610-22516629 Msa0594530:intron 40.0%
! TTCAGAGCACTAATCCTTGT+AGG - chr4_2:22516627-22516646 None:intergenic 40.0%
! CTTTTGCCAATGTTCATCGA+TGG + chr4_2:22516668-22516687 Msa0594530:intron 40.0%
ATCATGCCATCGATGAACAT+TGG - chr4_2:22516677-22516696 None:intergenic 40.0%
! CAACCTGTAAAGAGTATGCT+TGG - chr4_2:22516703-22516722 None:intergenic 40.0%
TTGCAGATATCCTGAAGGAT+CGG + chr4_2:22516720-22516739 Msa0594530:three_prime_UTR 40.0%
CAATCATTATATCCACAGCC+TGG - chr4_2:22516766-22516785 None:intergenic 40.0%
ATTGTCCTTCCCAACACAAA+TGG + chr4_2:22516782-22516801 Msa0594530:three_prime_UTR 40.0%
ATGGTTCCACCATTTGTGTT+GGG - chr4_2:22516794-22516813 None:intergenic 40.0%
TATGGTTCCACCATTTGTGT+TGG - chr4_2:22516795-22516814 None:intergenic 40.0%
!! CTGATCCTAAATTTGTTGGC+TGG - chr4_2:22517073-22517092 None:intergenic 40.0%
AGCTATCGTCTTGAGGATTA+TGG + chr4_2:22517124-22517143 Msa0594530:intron 40.0%
CCAACCTTGAAGAAAGAACG+AGG - chr4_2:22512859-22512878 None:intergenic 45.0%
CCTCGTTCTTTCTTCAAGGT+TGG + chr4_2:22512856-22512875 Msa0594530:CDS 45.0%
CACCGGCGTTAAAAGTCTTT+AGG + chr4_2:22513277-22513296 Msa0594530:intron 45.0%
CTAATTTCTCGAGCTGGAAC+TGG - chr4_2:22513331-22513350 None:intergenic 45.0%
AGTATTTGTAGCTGCGTGTG+GGG + chr4_2:22513349-22513368 Msa0594530:intron 45.0%
TGCTGTTCTGTTATGACAGC+AGG - chr4_2:22513610-22513629 None:intergenic 45.0%
CATAACAGAACAGCAGCTGT+TGG + chr4_2:22513615-22513634 Msa0594530:CDS 45.0%
!!! CCAGTTTGGGGTTTTAGCTT+GGG + chr4_2:22513697-22513716 Msa0594530:intron 45.0%
!!! CAGTTTGGGGTTTTAGCTTG+GGG + chr4_2:22513698-22513717 Msa0594530:intron 45.0%
CGGTCCTAACTGCATAAACA+TGG - chr4_2:22513787-22513806 None:intergenic 45.0%
TGTTTATGCAGTTAGGACCG+AGG + chr4_2:22513787-22513806 Msa0594530:CDS 45.0%
!! ATTAATGGTGCTGCAGAGAC+TGG + chr4_2:22513913-22513932 Msa0594530:intron 45.0%
! TAGTATCTTTGCACCGGTAG+TGG + chr4_2:22513998-22514017 Msa0594530:exon 45.0%
! AATGAAAGTTAGTGGGTGCG+TGG + chr4_2:22514241-22514260 Msa0594530:three_prime_UTR 45.0%
! GGAAGAAGGTTGGAGAGTTT+TGG + chr4_2:22514654-22514673 Msa0594530:three_prime_UTR 45.0%
CATGGCTAAGTATGGCAAAG+TGG + chr4_2:22514729-22514748 Msa0594530:three_prime_UTR 45.0%
GCATTAGAATCTGACACTGC+AGG - chr4_2:22514831-22514850 None:intergenic 45.0%
!! AAACTTTCGCGAAAGGCACT+CGG - chr4_2:22514889-22514908 None:intergenic 45.0%
CATAGGATAAGCAGCTGAAG+AGG + chr4_2:22515465-22515484 Msa0594530:three_prime_UTR 45.0%
!! GAGTACCTTTTGGAGACAAG+TGG + chr4_2:22515518-22515537 Msa0594530:three_prime_UTR 45.0%
CAACTCCACTTGTCTCCAAA+AGG - chr4_2:22515526-22515545 None:intergenic 45.0%
GAGACAAGTGGAGTTGTTAG+TGG + chr4_2:22515530-22515549 Msa0594530:three_prime_UTR 45.0%
!! AGTGGAGTTGTTAGTGGACT+TGG + chr4_2:22515536-22515555 Msa0594530:three_prime_UTR 45.0%
!! GTGGAGTTGTTAGTGGACTT+GGG + chr4_2:22515537-22515556 Msa0594530:three_prime_UTR 45.0%
!! GTTGTTAGTGGACTTGGGAA+AGG + chr4_2:22515542-22515561 Msa0594530:three_prime_UTR 45.0%
GAGATGTCCCTGCTAACATT+TGG + chr4_2:22516028-22516047 Msa0594530:intron 45.0%
!!! AGGCTTAATGGTTTTGGTGG+AGG + chr4_2:22516149-22516168 Msa0594530:intron 45.0%
TTCTAACGTACTTGATGCGG+AGG - chr4_2:22516371-22516390 None:intergenic 45.0%
ACAGGTTGCAGATATCCTGA+AGG + chr4_2:22516715-22516734 Msa0594530:intron 45.0%
TTCCACCATTTGTGTTGGGA+AGG - chr4_2:22516790-22516809 None:intergenic 45.0%
CTGCATGTATTGCAGCTCTA+TGG - chr4_2:22516813-22516832 None:intergenic 45.0%
CATAGAGCTGCAATACATGC+AGG + chr4_2:22516811-22516830 Msa0594530:three_prime_UTR 45.0%
AGGCGAGTACAAAATGACGA+TGG - chr4_2:22516925-22516944 None:intergenic 45.0%
GACGATAGCTAGAGACTCAT+AGG - chr4_2:22517114-22517133 None:intergenic 45.0%
AGTCTCTAGCTATCGTCTTG+AGG + chr4_2:22517117-22517136 Msa0594530:intron 45.0%
!!! TTTTATTTTATATCAATTAT+CGG + chr4_2:22513874-22513893 Msa0594530:intron 5.0%
GAAAGAACGAGGGCGAAACT+TGG - chr4_2:22512848-22512867 None:intergenic 50.0%
TCGCCCTCGTTCTTTCTTCA+AGG + chr4_2:22512852-22512871 Msa0594530:CDS 50.0%
TCCGTGTCTTAGGAATGCAC+CGG + chr4_2:22513260-22513279 Msa0594530:intron 50.0%
! AGCCTTGTGGTTGTTGTTCG+TGG + chr4_2:22513550-22513569 Msa0594530:intron 50.0%
AGCCACGAACAACAACCACA+AGG - chr4_2:22513555-22513574 None:intergenic 50.0%
! TTGTGGTTGTTGTTCGTGGC+TGG + chr4_2:22513554-22513573 Msa0594530:intron 50.0%
!! GCTGTTGGTGCTGTTTCTGT+AGG + chr4_2:22513630-22513649 Msa0594530:CDS 50.0%
! TGTTTCTGTAGGCTGTGCAG+CGG + chr4_2:22513641-22513660 Msa0594530:CDS 50.0%
CAAACTGGCAGCACCTATCA+CGG - chr4_2:22513685-22513704 None:intergenic 50.0%
! GTGATAGGTGCTGCCAGTTT+GGG + chr4_2:22513684-22513703 Msa0594530:intron 50.0%
! TGATAGGTGCTGCCAGTTTG+GGG + chr4_2:22513685-22513704 Msa0594530:intron 50.0%
!!! GCCAGTTTGGGGTTTTAGCT+TGG + chr4_2:22513696-22513715 Msa0594530:intron 50.0%
CCCAAGCTAAAACCCCAAAC+TGG - chr4_2:22513700-22513719 None:intergenic 50.0%
!! TTTAGCTTGGGGCTGTTCAG+CGG + chr4_2:22513709-22513728 Msa0594530:intron 50.0%
TTGGCAGGGTTGACGATTCA+AGG + chr4_2:22513814-22513833 Msa0594530:CDS 50.0%
TGGCAGGGTTGACGATTCAA+GGG + chr4_2:22513815-22513834 Msa0594530:CDS 50.0%
TGCGTTTCGATCTTGTTCCC+CGG - chr4_2:22513975-22513994 None:intergenic 50.0%
TCCATGCGGAAATGGGAAGA+AGG + chr4_2:22514640-22514659 Msa0594530:three_prime_UTR 50.0%
ACCTTCTTCCCATTTCCGCA+TGG - chr4_2:22514644-22514663 None:intergenic 50.0%
TGCGGAAATGGGAAGAAGGT+TGG + chr4_2:22514644-22514663 Msa0594530:three_prime_UTR 50.0%
ATGAACCTGATCGGCAACTG+TGG - chr4_2:22514944-22514963 None:intergenic 50.0%
! GCAGCTGAAGAGGACTTGTT+TGG + chr4_2:22515475-22515494 Msa0594530:three_prime_UTR 50.0%
GGAGTTACTGCTAGCAGCAT+TGG + chr4_2:22515563-22515582 Msa0594530:three_prime_UTR 50.0%
! CAGCATTGGAGTACTCCTTC+AGG + chr4_2:22515577-22515596 Msa0594530:three_prime_UTR 50.0%
! GGAGTACTCCTTCAGGCTTA+TGG + chr4_2:22515584-22515603 Msa0594530:three_prime_UTR 50.0%
CACTGTCGTGTCTGTGTCAA+TGG + chr4_2:22515795-22515814 Msa0594530:intron 50.0%
TTCGTGGTATCGTGATAGCC+AGG + chr4_2:22516745-22516764 Msa0594530:three_prime_UTR 50.0%
GTCCTTCCCAACACAAATGG+TGG + chr4_2:22516785-22516804 Msa0594530:three_prime_UTR 50.0%
! TCTGGAGTAGGGCAGAGACT+TGG - chr4_2:22512803-22512822 None:intergenic 55.0%
GCCGGTGCATTCCTAAGACA+CGG - chr4_2:22513264-22513283 None:intergenic 55.0%
TTCTCGAGCTGGAACTGGAC+AGG - chr4_2:22513326-22513345 None:intergenic 55.0%
! TGTTGTTCGTGGCTGGCTGT+AGG + chr4_2:22513561-22513580 Msa0594530:intron 55.0%
! GTTGTTCGTGGCTGGCTGTA+GGG + chr4_2:22513562-22513581 Msa0594530:intron 55.0%
! TTGTTCGTGGCTGGCTGTAG+GGG + chr4_2:22513563-22513582 Msa0594530:intron 55.0%
TGTAGGGGGTCCTGTGGTTT+CGG + chr4_2:22513578-22513597 Msa0594530:intron 55.0%
CAGGCGAAAACCGAAACCAC+AGG - chr4_2:22513591-22513610 None:intergenic 55.0%
!!! GTGTCGGTTTTGGCCGTGAT+AGG + chr4_2:22513669-22513688 Msa0594530:CDS 55.0%
! CGTGATAGGTGCTGCCAGTT+TGG + chr4_2:22513683-22513702 Msa0594530:intron 55.0%
! TTAGCTTGGGGCTGTTCAGC+GGG + chr4_2:22513710-22513729 Msa0594530:intron 55.0%
! AGCGGGTAATGGCTTCGCTA+TGG + chr4_2:22513727-22513746 Msa0594530:intron 55.0%
! GCGGGTAATGGCTTCGCTAT+GGG + chr4_2:22513728-22513747 Msa0594530:intron 55.0%
CAGTTAGGACCGAGGCTTCT+TGG + chr4_2:22513795-22513814 Msa0594530:CDS 55.0%
TCAACCCTGCCAAGAAGCCT+CGG - chr4_2:22513807-22513826 None:intergenic 55.0%
! GAAAGTTAGTGGGTGCGTGG+AGG + chr4_2:22514244-22514263 Msa0594530:three_prime_UTR 55.0%
GAAGTCCACAGTTGCCGATC+AGG + chr4_2:22514936-22514955 Msa0594530:three_prime_UTR 55.0%
CAGTGGCTTCACTCATGCTC+AGG + chr4_2:22515674-22515693 Msa0594530:three_prime_UTR 55.0%
! ATCCGCTTGCTGCCACAGTA+GGG - chr4_2:22516584-22516603 None:intergenic 55.0%
TCCTGAAGGATCGGACTTCG+TGG + chr4_2:22516729-22516748 Msa0594530:three_prime_UTR 55.0%
ACCACGAAGTCCGATCCTTC+AGG - chr4_2:22516733-22516752 None:intergenic 55.0%
GTATCGTGATAGCCAGGCTG+TGG + chr4_2:22516751-22516770 Msa0594530:three_prime_UTR 55.0%
! TGTTCGTGGCTGGCTGTAGG+GGG + chr4_2:22513564-22513583 Msa0594530:intron 60.0%
!!! AGCGGCTGGTGTGTCGGTTT+TGG + chr4_2:22513659-22513678 Msa0594530:CDS 60.0%
TGGGGCTGTTCAGCGGGTAA+TGG + chr4_2:22513716-22513735 Msa0594530:intron 60.0%
TAGGACCGAGGCTTCTTGGC+AGG + chr4_2:22513799-22513818 Msa0594530:CDS 60.0%
AGGACCGAGGCTTCTTGGCA+GGG + chr4_2:22513800-22513819 Msa0594530:CDS 60.0%
TGCCCTACTGTGGCAGCAAG+CGG + chr4_2:22516579-22516598 Msa0594530:intron 60.0%
! CATCCGCTTGCTGCCACAGT+AGG - chr4_2:22516585-22516604 None:intergenic 60.0%
ACTGTGGCAGCAAGCGGATG+TGG + chr4_2:22516585-22516604 Msa0594530:intron 60.0%
AGCAAGCGGATGTGGCCTAG+TGG + chr4_2:22516593-22516612 Msa0594530:intron 60.0%
GCAAGCGGATGTGGCCTAGT+GGG + chr4_2:22516594-22516613 Msa0594530:intron 60.0%
TCTGTAGGCTGTGCAGCGGC+TGG + chr4_2:22513645-22513664 Msa0594530:CDS 65.0%
CTGTGCAGCGGCTGGTGTGT+CGG + chr4_2:22513653-22513672 Msa0594530:CDS 65.0%
!! TGGCAAAGTGGGCTGCACCG+AGG + chr4_2:22514741-22514760 Msa0594530:three_prime_UTR 65.0%
GCTGGCTGTAGGGGGTCCTG+TGG + chr4_2:22513572-22513591 Msa0594530:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 22512796 22517232 22512796 ID=Msa0594530;Name=Msa0594530
chr4_2 mRNA 22512796 22517232 22512796 ID=Msa0594530-mRNA-1;Parent=Msa0594530;Name=Msa0594530-mRNA-1;_AED=0.14;_eAED=0.18;_QI=0|0.71|0.62|1|0.42|0.5|8|1831|107
chr4_2 exon 22512796 22512877 22512796 ID=Msa0594530-mRNA-1:exon:6104;Parent=Msa0594530-mRNA-1
chr4_2 exon 22513583 22513690 22513583 ID=Msa0594530-mRNA-1:exon:6105;Parent=Msa0594530-mRNA-1
chr4_2 exon 22513775 22513836 22513775 ID=Msa0594530-mRNA-1:exon:6106;Parent=Msa0594530-mRNA-1
chr4_2 exon 22513929 22514043 22513929 ID=Msa0594530-mRNA-1:exon:6107;Parent=Msa0594530-mRNA-1
chr4_2 exon 22514213 22515695 22514213 ID=Msa0594530-mRNA-1:exon:6108;Parent=Msa0594530-mRNA-1
chr4_2 exon 22516719 22516832 22516719 ID=Msa0594530-mRNA-1:exon:6109;Parent=Msa0594530-mRNA-1
chr4_2 exon 22517013 22517115 22517013 ID=Msa0594530-mRNA-1:exon:6110;Parent=Msa0594530-mRNA-1
chr4_2 exon 22517145 22517232 22517145 ID=Msa0594530-mRNA-1:exon:6111;Parent=Msa0594530-mRNA-1
chr4_2 CDS 22512796 22512877 22512796 ID=Msa0594530-mRNA-1:cds;Parent=Msa0594530-mRNA-1
chr4_2 CDS 22513583 22513690 22513583 ID=Msa0594530-mRNA-1:cds;Parent=Msa0594530-mRNA-1
chr4_2 CDS 22513775 22513836 22513775 ID=Msa0594530-mRNA-1:cds;Parent=Msa0594530-mRNA-1
chr4_2 CDS 22513929 22514000 22513929 ID=Msa0594530-mRNA-1:cds;Parent=Msa0594530-mRNA-1
chr4_2 three_prime_UTR 22514001 22514043 22514001 ID=Msa0594530-mRNA-1:three_prime_utr;Parent=Msa0594530-mRNA-1
chr4_2 three_prime_UTR 22514213 22515695 22514213 ID=Msa0594530-mRNA-1:three_prime_utr;Parent=Msa0594530-mRNA-1
chr4_2 three_prime_UTR 22516719 22516832 22516719 ID=Msa0594530-mRNA-1:three_prime_utr;Parent=Msa0594530-mRNA-1
chr4_2 three_prime_UTR 22517013 22517115 22517013 ID=Msa0594530-mRNA-1:three_prime_utr;Parent=Msa0594530-mRNA-1
chr4_2 three_prime_UTR 22517145 22517232 22517145 ID=Msa0594530-mRNA-1:three_prime_utr;Parent=Msa0594530-mRNA-1
Gene Sequence

>Msa0594530

ATGTCCAAGTCTCTGCCCTACTCCAGAAAAGATGTTGACTACGATAACGCCAAGTTTCGCCCTCGTTCTTTCTTCAAGGTTGGGGGTCCTGTGGTTTCGGTTTTCGCCTGCTGTCATAACAGAACAGCAGCTGTTGGTGCTGTTTCTGTAGGCTGTGCAGCGGCTGGTGTGTCGGTTTTGGCCGTGATAGATTTCAAAGCCATGTTTATGCAGTTAGGACCGAGGCTTCTTGGCAGGGTTGACGATTCAAGGAGACTGGTTAGAGATTTTTATAAGATTCATAATGAAGTGAATACCGGGGAACAAGATCGAAACGCAACTTAG
Protein sequence

>Msa0594530

MSKSLPYSRKDVDYDNAKFRPRSFFKVGGPVVSVFACCHNRTAAVGAVSVGCAAAGVSVLAVIDFKAMFMQLGPRLLGRVDDSRRLVRDFYKIHNEVNTGEQDRNAT*