AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0281160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0281160 MtrunA17_Chr2g0286021 100.000 27 0 0 1 27 1 27 4.50e-13 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 116 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACCATAAGTTTAGGCTTT+AGG 0.170885 2_3:-16404236 Msa0281160:three_prime_UTR
TCTTTCCAGCCAACAAATTT+AGG 0.187535 2_3:-16402319 Msa0281160:intron
AACCATAAGTTTAGGCTTTA+GGG 0.213110 2_3:-16404235 Msa0281160:three_prime_UTR
AAGCTATATTGTAGGGTATA+TGG 0.229586 2_3:-16404145 Msa0281160:three_prime_UTR
GACTTGTTTGGTGTAAATTA+AGG 0.241182 2_3:-16403896 Msa0281160:three_prime_UTR
TTCAAATAAGTTAATCTAAA+AGG 0.250881 2_3:-16404031 Msa0281160:three_prime_UTR
GGAGAAAATTGAGTACCTTT+TGG 0.281512 2_3:-16403875 Msa0281160:three_prime_UTR
GCTTTAGTTCAAATTGCTTT+TGG 0.284571 2_3:-16405366 Msa0281160:intron
GGAGTACTCCTTCAGGCTTA+TGG 0.286052 2_3:-16403799 Msa0281160:three_prime_UTR
ACTGCTATTATTATCATGTT+TGG 0.291212 2_3:-16405025 Msa0281160:three_prime_UTR
ATCCCTAAAGCCTAAACTTA+TGG 0.300096 2_3:+16404233 None:intergenic
GGAAGAAGGTTGGAGAGTTT+TGG 0.300993 2_3:-16404733 Msa0281160:three_prime_UTR
TCGCCCTCGTTCTTTCTTCA+AGG 0.310085 2_3:-16406536 Msa0281160:CDS
CTTGCTGATCCTAAATTTGT+TGG 0.321349 2_3:+16402310 None:intergenic
AGCTATCGTCTTGAGGATTA+TGG 0.321477 2_3:-16402260 Msa0281160:three_prime_UTR
CTGCATGTATTGCAGCTCTA+TGG 0.327181 2_3:+16402573 None:intergenic
TACGCCACTATCTAAATTGC+AGG 0.347216 2_3:-16405117 Msa0281160:three_prime_UTR
CAGTTAGGACCGAGGCTTCT+TGG 0.352101 2_3:-16405593 Msa0281160:CDS
AGCGGCTGGTGTGTCGGTTT+TGG 0.352405 2_3:-16405729 Msa0281160:CDS
TTCTATTGCATGGCTAAGTA+TGG 0.352654 2_3:-16404666 Msa0281160:three_prime_UTR
ACCACGAAGTCCGATCCTTC+AGG 0.362970 2_3:+16402653 None:intergenic
AACATACACATAAAATTTGC+AGG 0.374225 2_3:+16404789 None:intergenic
TTCCAAAACCAAAACACTAT+TGG 0.388360 2_3:+16402178 None:intergenic
ACGCACCCACTAACTTTCAT+TGG 0.393917 2_3:+16405149 None:intergenic
CCTCGTTCTTTCTTCAAGGT+TGG 0.406404 2_3:-16406532 Msa0281160:intron
TTACGAGAACTTATAGAAAC+AGG 0.407103 2_3:+16404087 None:intergenic
CAGCATTGGAGTACTCCTTC+AGG 0.411265 2_3:-16403806 Msa0281160:three_prime_UTR
AGTGGAGTTGTTAGTGGACT+TGG 0.412473 2_3:-16403847 Msa0281160:three_prime_UTR
GAAGTCCACAGTTGCCGATC+AGG 0.414976 2_3:-16404447 Msa0281160:three_prime_UTR
TAGGACCGAGGCTTCTTGGC+AGG 0.415660 2_3:-16405589 Msa0281160:CDS
GAGACAAGTGGAGTTGTTAG+TGG 0.419382 2_3:-16403853 Msa0281160:three_prime_UTR
ATGGTTCCACCATTTGTGTT+GGG 0.424035 2_3:+16402592 None:intergenic
TTGGCAGGGTTGACGATTCA+AGG 0.427680 2_3:-16405574 Msa0281160:CDS
GCAGCTGAAGAGGACTTGTT+TGG 0.442244 2_3:-16403908 Msa0281160:three_prime_UTR
CACTCTCCAAGCTATATTGT+AGG 0.446308 2_3:-16404153 Msa0281160:three_prime_UTR
TGCTGTTCTGTTATGACAGC+AGG 0.447721 2_3:+16405781 None:intergenic
TATGGTTCCACCATTTGTGT+TGG 0.455098 2_3:+16402591 None:intergenic
GGAGTTACTGCTAGCAGCAT+TGG 0.459197 2_3:-16403820 Msa0281160:three_prime_UTR
TGATATGCTGTAGCAGTTGT+TGG 0.463306 2_3:-16404262 Msa0281160:three_prime_UTR
AGCTATATTGTAGGGTATAT+GGG 0.463513 2_3:-16404144 Msa0281160:three_prime_UTR
GAAAGAACGAGGGCGAAACT+TGG 0.463754 2_3:+16406543 None:intergenic
ATTCATAATGAAGTGAATAC+CGG 0.464662 2_3:-16405435 Msa0281160:CDS
GGCTGAGCTCTATAAATAAG+AGG 0.470532 2_3:+16405170 None:intergenic
CAGTGGCTTCACTCATGCTC+AGG 0.473741 2_3:-16403709 Msa0281160:intron
CAACTCCACTTGTCTCCAAA+AGG 0.476312 2_3:+16403860 None:intergenic
GACGATAGCTAGAGACTCAT+AGG 0.476917 2_3:+16402273 None:intergenic
TCCTGAAGGATCGGACTTCG+TGG 0.492081 2_3:-16402654 Msa0281160:three_prime_UTR
TAAGTGATAAATGAATAAGA+TGG 0.492984 2_3:-16404313 Msa0281160:three_prime_UTR
TCTGTAGGCTGTGCAGCGGC+TGG 0.495036 2_3:-16405743 Msa0281160:CDS
ATAACCTGCAATTTAGATAG+TGG 0.495770 2_3:+16405113 None:intergenic
GCTGTTGGTGCTATTTCTGT+AGG 0.499099 2_3:-16405758 Msa0281160:CDS
TTGGTTACAACCATAAGTTT+AGG 0.503324 2_3:-16404243 Msa0281160:three_prime_UTR
ATTGTCCTTCCCAACACAAA+TGG 0.508396 2_3:-16402601 Msa0281160:three_prime_UTR
TAGTATCTTTGCACCGGTAG+CGG 0.510686 2_3:-16405390 Msa0281160:three_prime_UTR
TCCATGCGGAAATGGGAAGA+AGG 0.514677 2_3:-16404747 Msa0281160:three_prime_UTR
GCATTAGAATCTGACACTGC+AGG 0.515006 2_3:+16404559 None:intergenic
GCTCAGCCAATGAAAGTTAG+TGG 0.517412 2_3:-16405155 Msa0281160:three_prime_UTR
AAACTTTCGCGAAAGGCACT+CGG 0.518788 2_3:+16404501 None:intergenic
GAGAACTCAAATGAAAGATA+AGG 0.519927 2_3:+16405071 None:intergenic
AAGTGATAAATGAATAAGAT+GGG 0.522280 2_3:-16404312 Msa0281160:three_prime_UTR
TGCGGAAATGGGAAGAAGGT+TGG 0.524281 2_3:-16404743 Msa0281160:three_prime_UTR
GTTGTTAGTGGACTTGGGAA+AGG 0.528717 2_3:-16403841 Msa0281160:three_prime_UTR
TGCGTTTCGATCTTGTTCCC+CGG 0.532113 2_3:+16405416 None:intergenic
AAGACTATATTGTCAAAAGA+AGG 0.532861 2_3:+16404913 None:intergenic
AGGACCGAGGCTTCTTGGCA+GGG 0.533687 2_3:-16405588 Msa0281160:CDS
CTGTGCAGCGGCTGGTGTGT+CGG 0.534067 2_3:-16405735 Msa0281160:CDS
ATATACCCTACAATATAGCT+TGG 0.536716 2_3:+16404147 None:intergenic
TTCCACCATTTGTGTTGGGA+AGG 0.538380 2_3:+16402596 None:intergenic
TTGAACTAAAGCACCGCTAC+CGG 0.540102 2_3:+16405377 None:intergenic
TTCGTGGTATCGTGATAGCC+AGG 0.540887 2_3:-16402638 Msa0281160:three_prime_UTR
ATAAACTAACTTCTATTGCA+TGG 0.542096 2_3:-16404676 Msa0281160:three_prime_UTR
TCTGGAGTAGGGCAGAGACT+TGG 0.544052 2_3:+16406588 None:intergenic
ACAACTGCTACAGCATATCA+TGG 0.544123 2_3:+16404265 None:intergenic
TTCATAATGAAGTGAATACC+GGG 0.553640 2_3:-16405434 Msa0281160:CDS
ATGAACCTGATCGGCAACTG+TGG 0.556047 2_3:+16404442 None:intergenic
TAATGACTATAAATGCACTC+TGG 0.559994 2_3:-16404846 Msa0281160:three_prime_UTR
CAATTTAGATAGTGGCGTAA+AGG 0.562740 2_3:+16405121 None:intergenic
GAGAGTTAAACTTTCGCGAA+AGG 0.563012 2_3:+16404494 None:intergenic
ACTCTCCAAGCTATATTGTA+GGG 0.569220 2_3:-16404152 Msa0281160:three_prime_UTR
TGGCAGGGTTGACGATTCAA+GGG 0.571112 2_3:-16405573 Msa0281160:intron
TCAACCCTGCCAAGAAGCCT+CGG 0.575981 2_3:+16405584 None:intergenic
GTATCGTGATAGCCAGGCTG+TGG 0.577136 2_3:-16402632 Msa0281160:three_prime_UTR
ATCGAAATCCATAAGCCTGA+AGG 0.582144 2_3:+16403791 None:intergenic
CATAGGATAAGCAGCTGAAG+AGG 0.583093 2_3:-16403918 Msa0281160:three_prime_UTR
CAGGCGAAAACCGAAACCAC+AGG 0.584676 2_3:+16405800 None:intergenic
ACCTTCTTCCCATTTCCGCA+TGG 0.587749 2_3:+16404746 None:intergenic
GTGGAGTTGTTAGTGGACTT+GGG 0.588312 2_3:-16403846 Msa0281160:three_prime_UTR
GTCCTTCCCAACACAAATGG+TGG 0.593510 2_3:-16402598 Msa0281160:three_prime_UTR
CATTAGAATCTGACACTGCA+GGG 0.594106 2_3:+16404560 None:intergenic
CATAGAGCTGCAATACATGC+AGG 0.594541 2_3:-16402572 Msa0281160:intron
AAGTTAATCTAAAAGGAATG+AGG 0.596998 2_3:-16404024 Msa0281160:three_prime_UTR
AAAAGTGAAATGAACCTGAT+CGG 0.598666 2_3:+16404433 None:intergenic
CATGGCTAAGTATGGCAAAG+TGG 0.599899 2_3:-16404658 Msa0281160:three_prime_UTR
AGTCTCTAGCTATCGTCTTG+AGG 0.600364 2_3:-16402267 Msa0281160:three_prime_UTR
TTGCAGATATCCTGAAGGAT+CGG 0.600491 2_3:-16402663 Msa0281160:three_prime_UTR
GCAACTTAGTATCTTTGCAC+CGG 0.601933 2_3:-16405396 Msa0281160:exon
CTCAGCCAATGAAAGTTAGT+GGG 0.605897 2_3:-16405154 Msa0281160:three_prime_UTR
CATAACAGAACAGCAGCTGT+TGG 0.608552 2_3:-16405773 Msa0281160:CDS
ATATGAAAGACTATACAACT+TGG 0.609818 2_3:+16404948 None:intergenic
TTATGGAGCATCTTCACCAA+GGG 0.620476 2_3:-16402243 Msa0281160:three_prime_UTR
CAATCATTATATCCACAGCC+TGG 0.623559 2_3:+16402620 None:intergenic
ACAGGTTGCAGATATCCTGA+AGG 0.627860 2_3:-16402668 Msa0281160:intron
AATGAAAGTTAGTGGGTGCG+TGG 0.628150 2_3:-16405147 Msa0281160:three_prime_UTR
GTTCAGCATTCAATCTACTG+TGG 0.633099 2_3:+16404820 None:intergenic
AATTTAGGATCAGCAAGAGA+TGG 0.634057 2_3:-16402304 Msa0281160:three_prime_UTR
GATGAGATCAGTGTCTACAA+TGG 0.634391 2_3:-16403753 Msa0281160:three_prime_UTR
TGTTTATGCAGTTAGGACCG+AGG 0.648761 2_3:-16405601 Msa0281160:intron
ATTATGGAGCATCTTCACCA+AGG 0.653602 2_3:-16402244 Msa0281160:three_prime_UTR
ATGGCTAAGTATGGCAAAGT+GGG 0.656929 2_3:-16404657 Msa0281160:three_prime_UTR
GAAAGTTAGTGGGTGCGTGG+AGG 0.661324 2_3:-16405144 Msa0281160:three_prime_UTR
CTAATTGTGATTCTAGACCT+CGG 0.667604 2_3:+16404629 None:intergenic
CCAACCTTGAAGAAAGAACG+AGG 0.679370 2_3:+16406532 None:intergenic
CAACCTTGAAGAAAGAACGA+GGG 0.685781 2_3:+16406533 None:intergenic
TATTTCTGTAGGCTGTGCAG+CGG 0.701103 2_3:-16405747 Msa0281160:CDS
TGGCAAAGTGGGCTGCACCG+AGG 0.735778 2_3:-16404646 Msa0281160:three_prime_UTR
TCATAATGAAGTGAATACCG+GGG 0.737007 2_3:-16405433 Msa0281160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTGTTTTTTTTGTTT+TGG - chr2_3:16403794-16403813 Msa0281160:three_prime_UTR 10.0%
!! AAACATTGAATTAATAAATG+AGG + chr2_3:16402385-16402404 None:intergenic 15.0%
!!! AATTCAATGTTTTTAGTTTT+TGG - chr2_3:16402393-16402412 Msa0281160:intron 15.0%
!!! ATTCAATGTTTTTAGTTTTT+GGG - chr2_3:16402394-16402413 Msa0281160:intron 15.0%
!! AAAATGTATTTAATACAAGA+CGG + chr2_3:16402852-16402871 None:intergenic 15.0%
!! AAAACAAAAAATCAATTTGA+AGG + chr2_3:16403786-16403805 None:intergenic 15.0%
!! TTCAAATAAGTTAATCTAAA+AGG - chr2_3:16404734-16404753 Msa0281160:three_prime_UTR 15.0%
!! AAAATAAAAACAAAGTTCTA+AGG - chr2_3:16405600-16405619 Msa0281160:intron 15.0%
!!! TAGAACTTTGTTTTTATTTT+AGG + chr2_3:16405600-16405619 None:intergenic 15.0%
!! AAAATAAAAACAAAGTTCTA+AGG - chr2_3:16405600-16405619 Msa0281160:intron 15.0%
!! CTATAATAAGAGAATTGAAT+AGG + chr2_3:16402266-16402285 None:intergenic 20.0%
!! AAGAAAGAAAGTGATAAAAT+CGG + chr2_3:16402756-16402775 None:intergenic 20.0%
!! ACCATTAATGTAAAAATTAG+GGG + chr2_3:16403279-16403298 None:intergenic 20.0%
!! CACCATTAATGTAAAAATTA+GGG + chr2_3:16403280-16403299 None:intergenic 20.0%
!!! TATTTTATTTGTGTGACTAA+AGG - chr2_3:16403447-16403466 Msa0281160:intron 20.0%
!! TTTAATATAAAACAAGCTAC+TGG + chr2_3:16403515-16403534 None:intergenic 20.0%
!! TAAGTGATAAATGAATAAGA+TGG - chr2_3:16404452-16404471 Msa0281160:three_prime_UTR 20.0%
!! AAGTGATAAATGAATAAGAT+GGG - chr2_3:16404453-16404472 Msa0281160:three_prime_UTR 20.0%
!!! TCAATTTTGTTTGTTTGTTT+TGG - chr2_3:16404555-16404574 Msa0281160:three_prime_UTR 20.0%
!!! CAATTTTGTTTGTTTGTTTT+GGG - chr2_3:16404556-16404575 Msa0281160:three_prime_UTR 20.0%
!!! AATTTTGTTTGTTTGTTTTG+GGG - chr2_3:16404557-16404576 Msa0281160:three_prime_UTR 20.0%
!! CTACTATCATTAATTCATTA+TGG + chr2_3:16405223-16405242 None:intergenic 20.0%
!!! AAATATATGAATGCATTTTC+TGG - chr2_3:16405559-16405578 Msa0281160:intron 20.0%
!!! TTGATAAATATTTTTGACAG+TGG + chr2_3:16405703-16405722 None:intergenic 20.0%
! ATAAGAGAATTGAATAGGAA+AGG + chr2_3:16402261-16402280 None:intergenic 25.0%
!!! TTTTGTTTTTCTGTTTTTCG+TGG - chr2_3:16402299-16402318 Msa0281160:three_prime_UTR 25.0%
!!! TTTGTTGTTGTTAGAATTGT+AGG - chr2_3:16402330-16402349 Msa0281160:intron 25.0%
! TTCGGCTTAATTAGTAATAT+TGG - chr2_3:16402606-16402625 Msa0281160:three_prime_UTR 25.0%
! TCGGCTTAATTAGTAATATT+GGG - chr2_3:16402607-16402626 Msa0281160:three_prime_UTR 25.0%
!!! ACATTTTCTGTTTTAGTTGT+TGG - chr2_3:16402865-16402884 Msa0281160:intron 25.0%
!! ACCCCTAATTTTTACATTAA+TGG - chr2_3:16403275-16403294 Msa0281160:intron 25.0%
! GCACCATTAATGTAAAAATT+AGG + chr2_3:16403281-16403300 None:intergenic 25.0%
! ATTCATAATGAAGTGAATAC+CGG - chr2_3:16403330-16403349 Msa0281160:intron 25.0%
! ACTGCTATTATTATCATGTT+TGG - chr2_3:16403740-16403759 Msa0281160:three_prime_UTR 25.0%
! ATATGAAAGACTATACAACT+TGG + chr2_3:16403820-16403839 None:intergenic 25.0%
! AAGACTATATTGTCAAAAGA+AGG + chr2_3:16403855-16403874 None:intergenic 25.0%
! AACATACACATAAAATTTGC+AGG + chr2_3:16403979-16403998 None:intergenic 25.0%
! ATAAACTAACTTCTATTGCA+TGG - chr2_3:16404089-16404108 Msa0281160:three_prime_UTR 25.0%
!! CAACTATTGTTGGAATTTTA+TGG - chr2_3:16404358-16404377 Msa0281160:three_prime_UTR 25.0%
! AAGTTAATCTAAAAGGAATG+AGG - chr2_3:16404741-16404760 Msa0281160:three_prime_UTR 25.0%
!! CTTATGGATTTCGATTTTAT+AGG - chr2_3:16404982-16405001 Msa0281160:three_prime_UTR 25.0%
!! TTTCGATTTTATAGGTCATT+TGG - chr2_3:16404990-16405009 Msa0281160:three_prime_UTR 25.0%
! CTATCATTAATTCATTATGG+AGG + chr2_3:16405220-16405239 None:intergenic 25.0%
! GCTTTAATTAGACAAAACAA+AGG - chr2_3:16405511-16405530 Msa0281160:intron 25.0%
!!! GTTCTAAAACAATGATTTGT+TGG + chr2_3:16406398-16406417 None:intergenic 25.0%
! AAAAATATCTAGTTATCCCT+TGG + chr2_3:16406541-16406560 None:intergenic 25.0%
!!! GGGATAACTAGATATTTTTA+TGG - chr2_3:16406542-16406561 Msa0281160:CDS 25.0%
!!! ATTTTTAGCCAATAGTGTTT+TGG - chr2_3:16406579-16406598 Msa0281160:CDS 25.0%
AAATATTCCAGAACATAGCA+AGG + chr2_3:16402466-16402485 None:intergenic 30.0%
TTAGTCATGCATACAATTGA+GGG + chr2_3:16402541-16402560 None:intergenic 30.0%
! TGTCATGTTGTATTAGTTTG+AGG - chr2_3:16402799-16402818 Msa0281160:intron 30.0%
! GAGGTGTGATTTCTTTTATT+TGG - chr2_3:16402818-16402837 Msa0281160:intron 30.0%
TTCATAATGAAGTGAATACC+GGG - chr2_3:16403331-16403350 Msa0281160:intron 30.0%
!! GCTTTAGTTCAAATTGCTTT+TGG - chr2_3:16403399-16403418 Msa0281160:intron 30.0%
CTGGTGAATTATCATATAAG+TGG + chr2_3:16403570-16403589 None:intergenic 30.0%
CTTATATGATAATTCACCAG+TGG - chr2_3:16403570-16403589 Msa0281160:intron 30.0%
ATAACCTGCAATTTAGATAG+TGG + chr2_3:16403655-16403674 None:intergenic 30.0%
GAGAACTCAAATGAAAGATA+AGG + chr2_3:16403697-16403716 None:intergenic 30.0%
TAATGACTATAAATGCACTC+TGG - chr2_3:16403919-16403938 Msa0281160:three_prime_UTR 30.0%
!!! GTGCTAATTTTTTTTCCATG+CGG - chr2_3:16404004-16404023 Msa0281160:three_prime_UTR 30.0%
!!! ATTTTTTTTCCATGCGGAAA+TGG - chr2_3:16404010-16404029 Msa0281160:three_prime_UTR 30.0%
!!! TTTTTTTTCCATGCGGAAAT+GGG - chr2_3:16404011-16404030 Msa0281160:three_prime_UTR 30.0%
AAAAGTGAAATGAACCTGAT+CGG + chr2_3:16404335-16404354 None:intergenic 30.0%
! CACTTTTATGCAACTATTGT+TGG - chr2_3:16404348-16404367 Msa0281160:three_prime_UTR 30.0%
TTGGTTACAACCATAAGTTT+AGG - chr2_3:16404522-16404541 Msa0281160:three_prime_UTR 30.0%
AACCATAAGTTTAGGCTTTA+GGG - chr2_3:16404530-16404549 Msa0281160:three_prime_UTR 30.0%
ATATACCCTACAATATAGCT+TGG + chr2_3:16404621-16404640 None:intergenic 30.0%
AAGCTATATTGTAGGGTATA+TGG - chr2_3:16404620-16404639 Msa0281160:three_prime_UTR 30.0%
AGCTATATTGTAGGGTATAT+GGG - chr2_3:16404621-16404640 Msa0281160:three_prime_UTR 30.0%
TTACGAGAACTTATAGAAAC+AGG + chr2_3:16404681-16404700 None:intergenic 30.0%
!! TTGTTTTGTGCATTTTGCAT+AGG - chr2_3:16404830-16404849 Msa0281160:three_prime_UTR 30.0%
!! GACTTGTTTGGTGTAAATTA+AGG - chr2_3:16404869-16404888 Msa0281160:three_prime_UTR 30.0%
GAAATGTACAGCTTATGTAT+AGG - chr2_3:16405260-16405279 Msa0281160:intron 30.0%
TGTCACATTTGCATATTTGT+TGG - chr2_3:16405297-16405316 Msa0281160:intron 30.0%
CTACAAAACTAGAGAATCAT+TGG + chr2_3:16405382-16405401 None:intergenic 30.0%
!!! TGATTCTCTAGTTTTGTAGA+TGG - chr2_3:16405383-16405402 Msa0281160:three_prime_UTR 30.0%
!!! GATTCTCTAGTTTTGTAGAT+GGG - chr2_3:16405384-16405403 Msa0281160:three_prime_UTR 30.0%
TAAAAGACCAAATGTTAGCA+GGG + chr2_3:16405420-16405439 None:intergenic 30.0%
ATAAAAGACCAAATGTTAGC+AGG + chr2_3:16405421-16405440 None:intergenic 30.0%
!! CTAACATTTGGTCTTTTATG+TGG - chr2_3:16405422-16405441 Msa0281160:CDS 30.0%
!!! TTTTGTGTTGTTTGCACATA+CGG - chr2_3:16405468-16405487 Msa0281160:intron 30.0%
TAGACAAAACAAAGGCTTAA+TGG - chr2_3:16405519-16405538 Msa0281160:intron 30.0%
! AAACAAAGGCTTAATGGTTT+TGG - chr2_3:16405525-16405544 Msa0281160:intron 30.0%
!!! ATGAATGCATTTTCTGGTTT+AGG - chr2_3:16405565-16405584 Msa0281160:intron 30.0%
!! TTTCTGGTTTAGGTGTATAT+AGG - chr2_3:16405575-16405594 Msa0281160:CDS 30.0%
! TATTTCTAACGTACTTGATG+CGG + chr2_3:16405756-16405775 None:intergenic 30.0%
ATACTTTCTTGACTGAAAGA+TGG + chr2_3:16406277-16406296 None:intergenic 30.0%
!! TAAAACAATGATTTGTTGGC+TGG + chr2_3:16406394-16406413 None:intergenic 30.0%
TTCCAAAACCAAAACACTAT+TGG + chr2_3:16406590-16406609 None:intergenic 30.0%
!!! TCAACATCTTTTCTGGAGTA+GGG + chr2_3:16402191-16402210 None:intergenic 35.0%
! ATCGTAGTCAACATCTTTTC+TGG + chr2_3:16402198-16402217 None:intergenic 35.0%
GCTAAGAAATTGTGACAGTA+GGG + chr2_3:16402433-16402452 None:intergenic 35.0%
AGCTAAGAAATTGTGACAGT+AGG + chr2_3:16402434-16402453 None:intergenic 35.0%
! ATTAGTTCCTTGCTATGTTC+TGG - chr2_3:16402456-16402475 Msa0281160:intron 35.0%
GTTAGTCATGCATACAATTG+AGG + chr2_3:16402542-16402561 None:intergenic 35.0%
TGAGATGAGATGAGGTAATA+AGG - chr2_3:16402577-16402596 Msa0281160:three_prime_UTR 35.0%
GAGATGAGATGAGGTAATAA+GGG - chr2_3:16402578-16402597 Msa0281160:three_prime_UTR 35.0%
CAAATACTAATTTCTCGAGC+TGG + chr2_3:16402714-16402733 None:intergenic 35.0%
TTAGTTGTTGGATGACGTAA+CGG - chr2_3:16402877-16402896 Msa0281160:intron 35.0%
! TTCGCTATGGGTTTGAATTT+TGG - chr2_3:16403117-16403136 Msa0281160:intron 35.0%
AAAGCCATGTTTATGCAGTT+AGG - chr2_3:16403157-16403176 Msa0281160:intron 35.0%
TCATAATGAAGTGAATACCG+GGG - chr2_3:16403332-16403351 Msa0281160:intron 35.0%
CTATAAATAAGAGGATCCAC+TGG + chr2_3:16403589-16403608 None:intergenic 35.0%
! CAATTTAGATAGTGGCGTAA+AGG + chr2_3:16403647-16403666 None:intergenic 35.0%
AGCAGTCAAACAAAAATGCA+TGG + chr2_3:16403726-16403745 None:intergenic 35.0%
!!! TGGAGAGTTTTGGCTTTATT+TGG - chr2_3:16404042-16404061 Msa0281160:three_prime_UTR 35.0%
TTCTATTGCATGGCTAAGTA+TGG - chr2_3:16404099-16404118 Msa0281160:three_prime_UTR 35.0%
CTAATTGTGATTCTAGACCT+CGG + chr2_3:16404139-16404158 None:intergenic 35.0%
CAACCATAAGTTTAGGCTTT+AGG - chr2_3:16404529-16404548 Msa0281160:three_prime_UTR 35.0%
ATCCCTAAAGCCTAAACTTA+TGG + chr2_3:16404535-16404554 None:intergenic 35.0%
ACTCTCCAAGCTATATTGTA+GGG - chr2_3:16404613-16404632 Msa0281160:three_prime_UTR 35.0%
! GGAGAAAATTGAGTACCTTT+TGG - chr2_3:16404890-16404909 Msa0281160:three_prime_UTR 35.0%
TGCGTATATAGTCAAGTGTA+TGG - chr2_3:16405893-16405912 Msa0281160:intron 35.0%
!! CTGCTTTTCGAGAAGTTTAT+TGG - chr2_3:16405926-16405945 Msa0281160:intron 35.0%
TTATATAGTATGCCCTACTG+TGG - chr2_3:16405951-16405970 Msa0281160:intron 35.0%
! TTCAAAGCACTAATCCTTGT+AGG + chr2_3:16406009-16406028 None:intergenic 35.0%
AAACCATGCATACTCTTTAC+AGG - chr2_3:16406079-16406098 Msa0281160:intron 35.0%
TATTGACAATACTGATGCGA+AGG + chr2_3:16406326-16406345 None:intergenic 35.0%
TCTTTCCAGCCAACAAATTT+AGG - chr2_3:16406446-16406465 Msa0281160:intron 35.0%
CTTGCTGATCCTAAATTTGT+TGG + chr2_3:16406458-16406477 None:intergenic 35.0%
! AATTTAGGATCAGCAAGAGA+TGG - chr2_3:16406461-16406480 Msa0281160:intron 35.0%
!!! AGCCAATAGTGTTTTGGTTT+TGG - chr2_3:16406585-16406604 Msa0281160:CDS 35.0%
!!! GTCAACATCTTTTCTGGAGT+AGG + chr2_3:16402192-16402211 None:intergenic 40.0%
CAACCTTGAAGAAAGAACGA+GGG + chr2_3:16402235-16402254 None:intergenic 40.0%
TGTTGTGATGAGATGAGATG+AGG - chr2_3:16402569-16402588 Msa0281160:intron 40.0%
GAGGTAATAAGGGTCTCTTT+CGG - chr2_3:16402588-16402607 Msa0281160:three_prime_UTR 40.0%
GGGTTTAAATTCCGTGTCTT+AGG - chr2_3:16402627-16402646 Msa0281160:three_prime_UTR 40.0%
ACCGGCGTTAAAAGTCTTTA+GGG - chr2_3:16402655-16402674 Msa0281160:three_prime_UTR 40.0%
! ACCCTAAAGACTTTTAACGC+CGG + chr2_3:16402659-16402678 None:intergenic 40.0%
TTAGTATTTGTAGCTGCGTG+TGG - chr2_3:16402724-16402743 Msa0281160:intron 40.0%
TAGTATTTGTAGCTGCGTGT+GGG - chr2_3:16402725-16402744 Msa0281160:intron 40.0%
! CAACTTAACTAGTAGCCTTG+TGG - chr2_3:16402914-16402933 Msa0281160:intron 40.0%
GCAACTTAGTATCTTTGCAC+CGG - chr2_3:16403369-16403388 Msa0281160:intron 40.0%
GGCTGAGCTCTATAAATAAG+AGG + chr2_3:16403598-16403617 None:intergenic 40.0%
CTCAGCCAATGAAAGTTAGT+GGG - chr2_3:16403611-16403630 Msa0281160:intron 40.0%
TACGCCACTATCTAAATTGC+AGG - chr2_3:16403648-16403667 Msa0281160:intron 40.0%
GTTCAGCATTCAATCTACTG+TGG + chr2_3:16403948-16403967 None:intergenic 40.0%
ATGGCTAAGTATGGCAAAGT+GGG - chr2_3:16404108-16404127 Msa0281160:three_prime_UTR 40.0%
CATTAGAATCTGACACTGCA+GGG + chr2_3:16404208-16404227 None:intergenic 40.0%
GAGAGTTAAACTTTCGCGAA+AGG + chr2_3:16404274-16404293 None:intergenic 40.0%
ACAACTGCTACAGCATATCA+TGG + chr2_3:16404503-16404522 None:intergenic 40.0%
TGATATGCTGTAGCAGTTGT+TGG - chr2_3:16404503-16404522 Msa0281160:three_prime_UTR 40.0%
CACTCTCCAAGCTATATTGT+AGG - chr2_3:16404612-16404631 Msa0281160:three_prime_UTR 40.0%
ATCGAAATCCATAAGCCTGA+AGG + chr2_3:16404977-16404996 None:intergenic 40.0%
GATGAGATCAGTGTCTACAA+TGG - chr2_3:16405012-16405031 Msa0281160:three_prime_UTR 40.0%
! TTCTACACTTTTGCTCTCAG+TGG - chr2_3:16405039-16405058 Msa0281160:three_prime_UTR 40.0%
! TTGTAGCTGATTCCACTTAG+TGG - chr2_3:16405120-16405139 Msa0281160:three_prime_UTR 40.0%
! TGTAGCTGATTCCACTTAGT+GGG - chr2_3:16405121-16405140 Msa0281160:three_prime_UTR 40.0%
TGATTCCACTTAGTGGGATA+AGG - chr2_3:16405127-16405146 Msa0281160:three_prime_UTR 40.0%
! AAAAGCCTTATCCCACTAAG+TGG + chr2_3:16405135-16405154 None:intergenic 40.0%
AGACACTGAAAGAAGAGAAG+AGG - chr2_3:16405331-16405350 Msa0281160:intron 40.0%
GACACTGAAAGAAGAGAAGA+GGG - chr2_3:16405332-16405351 Msa0281160:intron 40.0%
!!! CTCTAGTTTTGTAGATGGGA+TGG - chr2_3:16405388-16405407 Msa0281160:three_prime_UTR 40.0%
!!! CAAAGGCTTAATGGTTTTGG+TGG - chr2_3:16405528-16405547 Msa0281160:intron 40.0%
GTGTTTGATGCTGCATATTG+AGG - chr2_3:16405626-16405645 Msa0281160:intron 40.0%
! AACAGTTCAGCAAACTTGCT+TGG + chr2_3:16405814-16405833 None:intergenic 40.0%
TTGTAGGTTATAGACCCACT+AGG + chr2_3:16405993-16406012 None:intergenic 40.0%
! TAGTGGGTCTATAACCTACA+AGG - chr2_3:16405992-16406011 Msa0281160:intron 40.0%
! CTTTTGCCAATGTTCATCGA+TGG - chr2_3:16406050-16406069 Msa0281160:intron 40.0%
ATCATGCCATCGATGAACAT+TGG + chr2_3:16406059-16406078 None:intergenic 40.0%
! CAACCTGTAAAGAGTATGCA+TGG + chr2_3:16406085-16406104 None:intergenic 40.0%
TTGCAGATATCCTGAAGGAT+CGG - chr2_3:16406102-16406121 Msa0281160:intron 40.0%
CAATCATTATATCCACAGCC+TGG + chr2_3:16406148-16406167 None:intergenic 40.0%
ATTGTCCTTCCCAACACAAA+TGG - chr2_3:16406164-16406183 Msa0281160:intron 40.0%
ATGGTTCCACCATTTGTGTT+GGG + chr2_3:16406176-16406195 None:intergenic 40.0%
TATGGTTCCACCATTTGTGT+TGG + chr2_3:16406177-16406196 None:intergenic 40.0%
!! CTGATCCTAAATTTGTTGGC+TGG + chr2_3:16406454-16406473 None:intergenic 40.0%
AGCTATCGTCTTGAGGATTA+TGG - chr2_3:16406505-16406524 Msa0281160:intron 40.0%
! ATTATGGAGCATCTTCACCA+AGG - chr2_3:16406521-16406540 Msa0281160:intron 40.0%
! TTATGGAGCATCTTCACCAA+GGG - chr2_3:16406522-16406541 Msa0281160:intron 40.0%
CCAACCTTGAAGAAAGAACG+AGG + chr2_3:16402236-16402255 None:intergenic 45.0%
CCTCGTTCTTTCTTCAAGGT+TGG - chr2_3:16402233-16402252 Msa0281160:three_prime_UTR 45.0%
CACCGGCGTTAAAAGTCTTT+AGG - chr2_3:16402654-16402673 Msa0281160:three_prime_UTR 45.0%
CTAATTTCTCGAGCTGGAAC+TGG + chr2_3:16402708-16402727 None:intergenic 45.0%
AGTATTTGTAGCTGCGTGTG+GGG - chr2_3:16402726-16402745 Msa0281160:intron 45.0%
TGCTGTTCTGTTATGACAGC+AGG + chr2_3:16402987-16403006 None:intergenic 45.0%
CATAACAGAACAGCAGCTGT+TGG - chr2_3:16402992-16403011 Msa0281160:intron 45.0%
!! GCTGTTGGTGCTATTTCTGT+AGG - chr2_3:16403007-16403026 Msa0281160:intron 45.0%
! TATTTCTGTAGGCTGTGCAG+CGG - chr2_3:16403018-16403037 Msa0281160:intron 45.0%
!!! CCAGTTTGGGGTTTTAGCTT+GGG - chr2_3:16403074-16403093 Msa0281160:intron 45.0%
!!! CAGTTTGGGGTTTTAGCTTG+GGG - chr2_3:16403075-16403094 Msa0281160:intron 45.0%
CGGTCCTAACTGCATAAACA+TGG + chr2_3:16403164-16403183 None:intergenic 45.0%
TGTTTATGCAGTTAGGACCG+AGG - chr2_3:16403164-16403183 Msa0281160:intron 45.0%
!! ATTAATGGTGCTGCAGAGAC+TGG - chr2_3:16403290-16403309 Msa0281160:intron 45.0%
! TAGTATCTTTGCACCGGTAG+CGG - chr2_3:16403375-16403394 Msa0281160:intron 45.0%
!! TTGAACTAAAGCACCGCTAC+CGG + chr2_3:16403391-16403410 None:intergenic 45.0%
GCTCAGCCAATGAAAGTTAG+TGG - chr2_3:16403610-16403629 Msa0281160:intron 45.0%
ACGCACCCACTAACTTTCAT+TGG + chr2_3:16403619-16403638 None:intergenic 45.0%
! AATGAAAGTTAGTGGGTGCG+TGG - chr2_3:16403618-16403637 Msa0281160:intron 45.0%
! GGAAGAAGGTTGGAGAGTTT+TGG - chr2_3:16404032-16404051 Msa0281160:three_prime_UTR 45.0%
CATGGCTAAGTATGGCAAAG+TGG - chr2_3:16404107-16404126 Msa0281160:three_prime_UTR 45.0%
GCATTAGAATCTGACACTGC+AGG + chr2_3:16404209-16404228 None:intergenic 45.0%
!! AAACTTTCGCGAAAGGCACT+CGG + chr2_3:16404267-16404286 None:intergenic 45.0%
CATAGGATAAGCAGCTGAAG+AGG - chr2_3:16404847-16404866 Msa0281160:three_prime_UTR 45.0%
!! GAGTACCTTTTGGAGACAAG+TGG - chr2_3:16404900-16404919 Msa0281160:three_prime_UTR 45.0%
CAACTCCACTTGTCTCCAAA+AGG + chr2_3:16404908-16404927 None:intergenic 45.0%
GAGACAAGTGGAGTTGTTAG+TGG - chr2_3:16404912-16404931 Msa0281160:three_prime_UTR 45.0%
!! AGTGGAGTTGTTAGTGGACT+TGG - chr2_3:16404918-16404937 Msa0281160:three_prime_UTR 45.0%
!! GTGGAGTTGTTAGTGGACTT+GGG - chr2_3:16404919-16404938 Msa0281160:three_prime_UTR 45.0%
!! GTTGTTAGTGGACTTGGGAA+AGG - chr2_3:16404924-16404943 Msa0281160:three_prime_UTR 45.0%
GAGATGTCCCTGCTAACATT+TGG - chr2_3:16405410-16405429 Msa0281160:CDS 45.0%
!!! AGGCTTAATGGTTTTGGTGG+AGG - chr2_3:16405531-16405550 Msa0281160:intron 45.0%
TTCTAACGTACTTGATGCGG+AGG + chr2_3:16405753-16405772 None:intergenic 45.0%
ACAGGTTGCAGATATCCTGA+AGG - chr2_3:16406097-16406116 Msa0281160:intron 45.0%
TTCCACCATTTGTGTTGGGA+AGG + chr2_3:16406172-16406191 None:intergenic 45.0%
CTGCATGTATTGCAGCTCTA+TGG + chr2_3:16406195-16406214 None:intergenic 45.0%
CATAGAGCTGCAATACATGC+AGG - chr2_3:16406193-16406212 Msa0281160:intron 45.0%
AGGCGAGTACAAAATGACGA+TGG + chr2_3:16406306-16406325 None:intergenic 45.0%
GACGATAGCTAGAGACTCAT+AGG + chr2_3:16406495-16406514 None:intergenic 45.0%
AGTCTCTAGCTATCGTCTTG+AGG - chr2_3:16406498-16406517 Msa0281160:intron 45.0%
!!! TTTTATTTTATATCAATTAT+CGG - chr2_3:16403251-16403270 Msa0281160:intron 5.0%
GAAAGAACGAGGGCGAAACT+TGG + chr2_3:16402225-16402244 None:intergenic 50.0%
TCGCCCTCGTTCTTTCTTCA+AGG - chr2_3:16402229-16402248 Msa0281160:three_prime_UTR 50.0%
TCCGTGTCTTAGGAATGCAC+CGG - chr2_3:16402637-16402656 Msa0281160:three_prime_UTR 50.0%
! AGCCTTGTGGTTGTTGTTCG+TGG - chr2_3:16402927-16402946 Msa0281160:intron 50.0%
AGCCACGAACAACAACCACA+AGG + chr2_3:16402932-16402951 None:intergenic 50.0%
! TTGTGGTTGTTGTTCGTGGC+TGG - chr2_3:16402931-16402950 Msa0281160:intron 50.0%
!!! GCCAGTTTGGGGTTTTAGCT+TGG - chr2_3:16403073-16403092 Msa0281160:intron 50.0%
CCCAAGCTAAAACCCCAAAC+TGG + chr2_3:16403077-16403096 None:intergenic 50.0%
!! TTTAGCTTGGGGCTGTTCAG+CGG - chr2_3:16403086-16403105 Msa0281160:intron 50.0%
TTGGCAGGGTTGACGATTCA+AGG - chr2_3:16403191-16403210 Msa0281160:intron 50.0%
TGGCAGGGTTGACGATTCAA+GGG - chr2_3:16403192-16403211 Msa0281160:intron 50.0%
TGCGTTTCGATCTTGTTCCC+CGG + chr2_3:16403352-16403371 None:intergenic 50.0%
TCCATGCGGAAATGGGAAGA+AGG - chr2_3:16404018-16404037 Msa0281160:three_prime_UTR 50.0%
ACCTTCTTCCCATTTCCGCA+TGG + chr2_3:16404022-16404041 None:intergenic 50.0%
TGCGGAAATGGGAAGAAGGT+TGG - chr2_3:16404022-16404041 Msa0281160:three_prime_UTR 50.0%
ATGAACCTGATCGGCAACTG+TGG + chr2_3:16404326-16404345 None:intergenic 50.0%
! GCAGCTGAAGAGGACTTGTT+TGG - chr2_3:16404857-16404876 Msa0281160:three_prime_UTR 50.0%
GGAGTTACTGCTAGCAGCAT+TGG - chr2_3:16404945-16404964 Msa0281160:three_prime_UTR 50.0%
! CAGCATTGGAGTACTCCTTC+AGG - chr2_3:16404959-16404978 Msa0281160:three_prime_UTR 50.0%
! GGAGTACTCCTTCAGGCTTA+TGG - chr2_3:16404966-16404985 Msa0281160:three_prime_UTR 50.0%
CACTGTCGTGTCTGTGTCAA+TGG - chr2_3:16405177-16405196 Msa0281160:three_prime_UTR 50.0%
TTCGTGGTATCGTGATAGCC+AGG - chr2_3:16406127-16406146 Msa0281160:intron 50.0%
GTCCTTCCCAACACAAATGG+TGG - chr2_3:16406167-16406186 Msa0281160:intron 50.0%
! TCTGGAGTAGGGCAGAGACT+TGG + chr2_3:16402180-16402199 None:intergenic 55.0%
GCCGGTGCATTCCTAAGACA+CGG + chr2_3:16402641-16402660 None:intergenic 55.0%
TTCTCGAGCTGGAACTGGAC+AGG + chr2_3:16402703-16402722 None:intergenic 55.0%
! TGTTGTTCGTGGCTGGCTGT+AGG - chr2_3:16402938-16402957 Msa0281160:intron 55.0%
! GTTGTTCGTGGCTGGCTGTA+GGG - chr2_3:16402939-16402958 Msa0281160:intron 55.0%
! TTGTTCGTGGCTGGCTGTAG+GGG - chr2_3:16402940-16402959 Msa0281160:intron 55.0%
TGTAGGGGGTCCTGTGGTTT+CGG - chr2_3:16402955-16402974 Msa0281160:intron 55.0%
CAGGCGAAAACCGAAACCAC+AGG + chr2_3:16402968-16402987 None:intergenic 55.0%
CAAACTGGCAGCACCTACCA+CGG + chr2_3:16403062-16403081 None:intergenic 55.0%
! GTGGTAGGTGCTGCCAGTTT+GGG - chr2_3:16403061-16403080 Msa0281160:intron 55.0%
! TGGTAGGTGCTGCCAGTTTG+GGG - chr2_3:16403062-16403081 Msa0281160:intron 55.0%
! TTAGCTTGGGGCTGTTCAGC+GGG - chr2_3:16403087-16403106 Msa0281160:intron 55.0%
! AGCGGGTAATGGCTTCGCTA+TGG - chr2_3:16403104-16403123 Msa0281160:intron 55.0%
! GCGGGTAATGGCTTCGCTAT+GGG - chr2_3:16403105-16403124 Msa0281160:intron 55.0%
CAGTTAGGACCGAGGCTTCT+TGG - chr2_3:16403172-16403191 Msa0281160:intron 55.0%
TCAACCCTGCCAAGAAGCCT+CGG + chr2_3:16403184-16403203 None:intergenic 55.0%
! GAAAGTTAGTGGGTGCGTGG+AGG - chr2_3:16403621-16403640 Msa0281160:intron 55.0%
GAAGTCCACAGTTGCCGATC+AGG - chr2_3:16404318-16404337 Msa0281160:three_prime_UTR 55.0%
CAGTGGCTTCACTCATGCTC+AGG - chr2_3:16405056-16405075 Msa0281160:three_prime_UTR 55.0%
! ATCCGCTTGCTGCCACAGTA+GGG + chr2_3:16405966-16405985 None:intergenic 55.0%
TCCTGAAGGATCGGACTTCG+TGG - chr2_3:16406111-16406130 Msa0281160:intron 55.0%
ACCACGAAGTCCGATCCTTC+AGG + chr2_3:16406115-16406134 None:intergenic 55.0%
GTATCGTGATAGCCAGGCTG+TGG - chr2_3:16406133-16406152 Msa0281160:intron 55.0%
! TGTTCGTGGCTGGCTGTAGG+GGG - chr2_3:16402941-16402960 Msa0281160:intron 60.0%
!!! AGCGGCTGGTGTGTCGGTTT+TGG - chr2_3:16403036-16403055 Msa0281160:intron 60.0%
!!! TGGTGTGTCGGTTTTGGCCG+TGG - chr2_3:16403042-16403061 Msa0281160:intron 60.0%
!!! GTGTCGGTTTTGGCCGTGGT+AGG - chr2_3:16403046-16403065 Msa0281160:intron 60.0%
! CGTGGTAGGTGCTGCCAGTT+TGG - chr2_3:16403060-16403079 Msa0281160:intron 60.0%
TGGGGCTGTTCAGCGGGTAA+TGG - chr2_3:16403093-16403112 Msa0281160:intron 60.0%
TAGGACCGAGGCTTCTTGGC+AGG - chr2_3:16403176-16403195 Msa0281160:intron 60.0%
AGGACCGAGGCTTCTTGGCA+GGG - chr2_3:16403177-16403196 Msa0281160:intron 60.0%
TGCCCTACTGTGGCAGCAAG+CGG - chr2_3:16405961-16405980 Msa0281160:intron 60.0%
! CATCCGCTTGCTGCCACAGT+AGG + chr2_3:16405967-16405986 None:intergenic 60.0%
ACTGTGGCAGCAAGCGGATG+TGG - chr2_3:16405967-16405986 Msa0281160:intron 60.0%
AGCAAGCGGATGTGGCCTAG+TGG - chr2_3:16405975-16405994 Msa0281160:intron 60.0%
GCAAGCGGATGTGGCCTAGT+GGG - chr2_3:16405976-16405995 Msa0281160:intron 60.0%
TCTGTAGGCTGTGCAGCGGC+TGG - chr2_3:16403022-16403041 Msa0281160:intron 65.0%
CTGTGCAGCGGCTGGTGTGT+CGG - chr2_3:16403030-16403049 Msa0281160:intron 65.0%
!! TGGCAAAGTGGGCTGCACCG+AGG - chr2_3:16404119-16404138 Msa0281160:three_prime_UTR 65.0%
GCTGGCTGTAGGGGGTCCTG+TGG - chr2_3:16402949-16402968 Msa0281160:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 16402173 16406614 16402173 ID=Msa0281160;Name=Msa0281160
chr2_3 mRNA 16402173 16406614 16402173 ID=Msa0281160-mRNA-1;Parent=Msa0281160;Name=Msa0281160-mRNA-1;_AED=0.15;_eAED=0.18;_QI=0|0.66|0.57|1|0.66|0.71|7|1805|98
chr2_3 exon 16402173 16402332 16402173 ID=Msa0281160-mRNA-1:exon:6819;Parent=Msa0281160-mRNA-1
chr2_3 exon 16402573 16402686 16402573 ID=Msa0281160-mRNA-1:exon:6818;Parent=Msa0281160-mRNA-1
chr2_3 exon 16403710 16405197 16403710 ID=Msa0281160-mRNA-1:exon:6817;Parent=Msa0281160-mRNA-1
chr2_3 exon 16405367 16405481 16405367 ID=Msa0281160-mRNA-1:exon:6816;Parent=Msa0281160-mRNA-1
chr2_3 exon 16405574 16405612 16405574 ID=Msa0281160-mRNA-1:exon:6815;Parent=Msa0281160-mRNA-1
chr2_3 exon 16405724 16405827 16405724 ID=Msa0281160-mRNA-1:exon:6814;Parent=Msa0281160-mRNA-1
chr2_3 exon 16406533 16406614 16406533 ID=Msa0281160-mRNA-1:exon:6813;Parent=Msa0281160-mRNA-1
chr2_3 CDS 16406533 16406614 16406533 ID=Msa0281160-mRNA-1:cds;Parent=Msa0281160-mRNA-1
chr2_3 CDS 16405724 16405827 16405724 ID=Msa0281160-mRNA-1:cds;Parent=Msa0281160-mRNA-1
chr2_3 CDS 16405574 16405612 16405574 ID=Msa0281160-mRNA-1:cds;Parent=Msa0281160-mRNA-1
chr2_3 CDS 16405410 16405481 16405410 ID=Msa0281160-mRNA-1:cds;Parent=Msa0281160-mRNA-1
chr2_3 three_prime_UTR 16405367 16405409 16405367 ID=Msa0281160-mRNA-1:three_prime_utr;Parent=Msa0281160-mRNA-1
chr2_3 three_prime_UTR 16403710 16405197 16403710 ID=Msa0281160-mRNA-1:three_prime_utr;Parent=Msa0281160-mRNA-1
chr2_3 three_prime_UTR 16402573 16402686 16402573 ID=Msa0281160-mRNA-1:three_prime_utr;Parent=Msa0281160-mRNA-1
chr2_3 three_prime_UTR 16402173 16402332 16402173 ID=Msa0281160-mRNA-1:three_prime_utr;Parent=Msa0281160-mRNA-1
Gene Sequence

>Msa0281160

ATGTCCAAGTCTCTGCCCTACTCCAGAAAAGATGTTGACTACGATAACGCCAAGTTTCGCCCTCGTTCTTTCTTCAAGGTTGGGGGTCCTGTGGTTTCGGTTTTCGCCTGCTGTCATAACAGAACAGCAGCTGTTGGTGCTATTTCTGTAGGCTGTGCAGCGGCTGGTGTGTCGGTTTTGGCCGTGTTAGGACCGAGGCTTCTTGGCAGGGTTGACGATTCAAGGAGACTGGTTAGAGATTTTTATAAGATTCATAATGAAGTGAATACCGGGGAACAAGATCGAAACGCAACTTAG
Protein sequence

>Msa0281160

MSKSLPYSRKDVDYDNAKFRPRSFFKVGGPVVSVFACCHNRTAAVGAISVGCAAAGVSVLAVLGPRLLGRVDDSRRLVRDFYKIHNEVNTGEQDRNAT*