Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0603190 | XP_013456100.1 | 99.384 | 649 | 4 | 0 | 1 | 649 | 1 | 649 | 0.0 | 1325 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0603190 | sp|P09189|HSP7C_PETHY | 92.802 | 653 | 41 | 2 | 1 | 649 | 1 | 651 | 0.0 | 1242 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0603190 | Msa0603200 | 0.861926 | 7.278175e-64 | -8.615850e-47 |
| Msa0603190 | Msa0644230 | 0.953866 | 1.063415e-111 | -8.615850e-47 |
| Msa0603190 | Msa0644240 | 0.855013 | 8.388720e-62 | -8.615850e-47 |
| Msa0548130 | Msa0603190 | 0.954458 | 2.827203e-112 | -8.615850e-47 |
| Msa0548300 | Msa0603190 | 0.862118 | 6.352732e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0603190 | MtrunA17_Chr4g0031301 | 99.384 | 649 | 4 | 0 | 1 | 649 | 1 | 649 | 0.0 | 1325 |
| Msa0603190 | MtrunA17_Chr4g0031321 | 99.230 | 649 | 5 | 0 | 1 | 649 | 1 | 649 | 0.0 | 1325 |
| Msa0603190 | MtrunA17_Chr7g0223291 | 92.934 | 651 | 42 | 3 | 1 | 649 | 1 | 649 | 0.0 | 1239 |
| Msa0603190 | MtrunA17_Chr7g0262821 | 92.296 | 649 | 50 | 0 | 1 | 649 | 1 | 649 | 0.0 | 1238 |
| Msa0603190 | MtrunA17_Chr7g0223181 | 92.627 | 651 | 43 | 2 | 1 | 649 | 1 | 648 | 0.0 | 1230 |
| Msa0603190 | MtrunA17_Chr4g0073741 | 87.768 | 654 | 74 | 3 | 1 | 649 | 1 | 653 | 0.0 | 1161 |
| Msa0603190 | MtrunA17_Chr6g0462681 | 66.992 | 615 | 202 | 1 | 1 | 615 | 1 | 614 | 0.0 | 850 |
| Msa0603190 | MtrunA17_Chr2g0284681 | 68.046 | 604 | 173 | 3 | 9 | 606 | 8 | 597 | 0.0 | 839 |
| Msa0603190 | MtrunA17_Chr7g0223751 | 66.345 | 621 | 204 | 4 | 1 | 619 | 1 | 618 | 0.0 | 838 |
| Msa0603190 | MtrunA17_Chr6g0462601 | 65.909 | 616 | 209 | 1 | 1 | 616 | 1 | 615 | 0.0 | 834 |
| Msa0603190 | MtrunA17_Chr7g0223711 | 65.056 | 621 | 213 | 3 | 1 | 619 | 1 | 619 | 0.0 | 828 |
| Msa0603190 | MtrunA17_Chr7g0221661 | 65.366 | 615 | 209 | 3 | 1 | 613 | 1 | 613 | 0.0 | 817 |
| Msa0603190 | MtrunA17_Chr2g0298851 | 65.590 | 619 | 206 | 6 | 1 | 615 | 1 | 616 | 0.0 | 813 |
| Msa0603190 | MtrunA17_Chr5g0427901 | 64.172 | 628 | 210 | 4 | 1 | 615 | 1 | 626 | 0.0 | 812 |
| Msa0603190 | MtrunA17_Chr7g0223741 | 66.164 | 597 | 198 | 3 | 1 | 595 | 1 | 595 | 0.0 | 812 |
| Msa0603190 | MtrunA17_Chr8g0350731 | 64.480 | 625 | 217 | 4 | 1 | 623 | 29 | 650 | 0.0 | 807 |
| Msa0603190 | MtrunA17_Chr2g0293581 | 64.927 | 613 | 211 | 3 | 6 | 615 | 7 | 618 | 0.0 | 804 |
| Msa0603190 | MtrunA17_Chr8g0388761 | 65.635 | 614 | 205 | 4 | 7 | 618 | 36 | 645 | 0.0 | 804 |
| Msa0603190 | MtrunA17_Chr8g0388671 | 65.635 | 614 | 205 | 4 | 7 | 618 | 36 | 645 | 0.0 | 802 |
| Msa0603190 | MtrunA17_Chr7g0223801 | 63.371 | 617 | 220 | 5 | 1 | 615 | 1 | 613 | 0.0 | 800 |
| Msa0603190 | MtrunA17_Chr7g0223731 | 64.803 | 608 | 209 | 4 | 1 | 606 | 1 | 605 | 0.0 | 798 |
| Msa0603190 | MtrunA17_Chr7g0233311 | 63.430 | 618 | 222 | 3 | 1 | 615 | 1 | 617 | 0.0 | 798 |
| Msa0603190 | MtrunA17_Chr7g0223621 | 64.098 | 610 | 214 | 4 | 1 | 608 | 1 | 607 | 0.0 | 791 |
| Msa0603190 | MtrunA17_Chr7g0223031 | 63.993 | 611 | 215 | 4 | 1 | 609 | 1 | 608 | 0.0 | 790 |
| Msa0603190 | MtrunA17_Chr6g0462711 | 62.939 | 626 | 225 | 3 | 2 | 621 | 3 | 627 | 0.0 | 786 |
| Msa0603190 | MtrunA17_Chr7g0248131 | 63.578 | 626 | 218 | 8 | 1 | 619 | 1 | 623 | 0.0 | 785 |
| Msa0603190 | MtrunA17_Chr2g0298861 | 61.905 | 630 | 223 | 6 | 1 | 615 | 1 | 628 | 0.0 | 781 |
| Msa0603190 | MtrunA17_Chr7g0223631 | 63.607 | 621 | 207 | 6 | 1 | 619 | 1 | 604 | 0.0 | 780 |
| Msa0603190 | MtrunA17_Chr6g0462771 | 61.981 | 626 | 232 | 2 | 1 | 621 | 1 | 625 | 0.0 | 780 |
| Msa0603190 | MtrunA17_Chr7g0223781 | 63.089 | 615 | 221 | 3 | 1 | 613 | 1 | 611 | 0.0 | 779 |
| Msa0603190 | MtrunA17_Chr2g0287631 | 64.563 | 618 | 215 | 3 | 1 | 615 | 1 | 617 | 0.0 | 777 |
| Msa0603190 | MtrunA17_Chr7g0248151 | 63.360 | 625 | 221 | 6 | 1 | 620 | 1 | 622 | 0.0 | 776 |
| Msa0603190 | MtrunA17_Chr4g0040931 | 62.684 | 611 | 223 | 4 | 1 | 608 | 1 | 609 | 0.0 | 776 |
| Msa0603190 | MtrunA17_Chr7g0223701 | 62.843 | 619 | 216 | 6 | 1 | 608 | 1 | 616 | 0.0 | 775 |
| Msa0603190 | MtrunA17_Chr6g0462641 | 61.342 | 626 | 236 | 2 | 1 | 621 | 1 | 625 | 0.0 | 773 |
| Msa0603190 | MtrunA17_Chr7g0225671 | 63.192 | 614 | 218 | 7 | 6 | 615 | 13 | 622 | 0.0 | 773 |
| Msa0603190 | MtrunA17_Chr7g0223721 | 61.812 | 618 | 231 | 4 | 1 | 615 | 1 | 616 | 0.0 | 772 |
| Msa0603190 | MtrunA17_Chr7g0223851 | 62.682 | 619 | 224 | 6 | 1 | 615 | 10 | 625 | 0.0 | 764 |
| Msa0603190 | MtrunA17_Chr2g0296391 | 68.561 | 528 | 163 | 2 | 1 | 526 | 1 | 527 | 0.0 | 747 |
| Msa0603190 | MtrunA17_Chr7g0233301 | 60.548 | 621 | 208 | 6 | 1 | 617 | 1 | 588 | 0.0 | 743 |
| Msa0603190 | MtrunA17_Chr7g0223821 | 61.997 | 621 | 224 | 7 | 1 | 613 | 1 | 617 | 0.0 | 735 |
| Msa0603190 | MtrunA17_Chr7g0217971 | 61.296 | 602 | 204 | 5 | 1 | 600 | 1 | 575 | 0.0 | 734 |
| Msa0603190 | MtrunA17_Chr8g0390821 | 56.632 | 671 | 219 | 10 | 1 | 616 | 1 | 654 | 0.0 | 721 |
| Msa0603190 | MtrunA17_Chr6g0462611 | 64.014 | 553 | 196 | 2 | 63 | 615 | 13 | 562 | 0.0 | 721 |
| Msa0603190 | MtrunA17_Chr4g0012541 | 58.805 | 619 | 239 | 7 | 1 | 615 | 1 | 607 | 0.0 | 712 |
| Msa0603190 | MtrunA17_Chr7g0223831 | 59.411 | 611 | 211 | 8 | 1 | 606 | 1 | 579 | 0.0 | 701 |
| Msa0603190 | MtrunA17_Chr7g0223541 | 61.141 | 561 | 216 | 2 | 61 | 621 | 20 | 578 | 0.0 | 693 |
| Msa0603190 | MtrunA17_Chr7g0215261 | 57.997 | 619 | 218 | 7 | 1 | 614 | 1 | 582 | 0.0 | 692 |
| Msa0603190 | MtrunA17_Chr7g0228281 | 56.311 | 618 | 220 | 7 | 1 | 615 | 62 | 632 | 0.0 | 672 |
| Msa0603190 | MtrunA17_Chr2g0299921 | 84.576 | 389 | 58 | 1 | 4 | 392 | 1024 | 1410 | 0.0 | 671 |
| Msa0603190 | MtrunA17_Chr2g0299921 | 83.636 | 385 | 60 | 2 | 4 | 387 | 1408 | 1790 | 0.0 | 637 |
| Msa0603190 | MtrunA17_Chr2g0299851 | 83.721 | 387 | 61 | 1 | 1 | 387 | 1030 | 1414 | 0.0 | 667 |
| Msa0603190 | MtrunA17_Chr7g0223681 | 61.770 | 531 | 200 | 3 | 89 | 619 | 2 | 529 | 0.0 | 665 |
| Msa0603190 | MtrunA17_Chr2g0293601 | 63.969 | 519 | 150 | 3 | 1 | 517 | 1 | 484 | 0.0 | 654 |
| Msa0603190 | MtrunA17_Chr2g0299791 | 81.443 | 388 | 70 | 1 | 1 | 388 | 1034 | 1419 | 0.0 | 648 |
| Msa0603190 | MtrunA17_Chr2g0299821 | 72.000 | 450 | 112 | 3 | 1 | 436 | 1 | 450 | 0.0 | 638 |
| Msa0603190 | MtrunA17_Chr2g0299821 | 78.947 | 95 | 13 | 1 | 452 | 539 | 390 | 484 | 2.28e-39 | 151 |
| Msa0603190 | MtrunA17_Chr2g0331381 | 58.965 | 541 | 156 | 6 | 9 | 547 | 6 | 482 | 0.0 | 635 |
| Msa0603190 | MtrunA17_Chr2g0299881 | 77.057 | 401 | 86 | 3 | 6 | 402 | 1035 | 1433 | 0.0 | 627 |
| Msa0603190 | MtrunA17_Chr2g0299881 | 75.758 | 66 | 12 | 1 | 183 | 248 | 1414 | 1475 | 5.10e-22 | 101 |
| Msa0603190 | MtrunA17_Chr2g0293561 | 73.262 | 374 | 98 | 1 | 1 | 372 | 1 | 374 | 0.0 | 581 |
| Msa0603190 | MtrunA17_Chr1g0166551 | 50.977 | 614 | 183 | 8 | 6 | 615 | 2 | 501 | 0.0 | 579 |
| Msa0603190 | MtrunA17_Chr2g0279901 | 51.167 | 600 | 263 | 10 | 10 | 602 | 57 | 633 | 0.0 | 573 |
| Msa0603190 | MtrunA17_Chr6g0462861 | 50.159 | 628 | 277 | 11 | 1 | 615 | 1 | 605 | 0.0 | 568 |
| Msa0603190 | MtrunA17_Chr4g0049501 | 50.667 | 600 | 267 | 10 | 10 | 602 | 54 | 631 | 0.0 | 561 |
| Msa0603190 | MtrunA17_Chr2g0277021 | 47.819 | 642 | 306 | 13 | 10 | 641 | 72 | 694 | 0.0 | 533 |
| Msa0603190 | MtrunA17_Chr2g0293271 | 54.691 | 437 | 125 | 4 | 21 | 455 | 43 | 408 | 6.01e-161 | 468 |
| Msa0603190 | MtrunA17_Chr1g0151991 | 70.790 | 291 | 83 | 1 | 1 | 289 | 1 | 291 | 4.31e-149 | 433 |
| Msa0603190 | MtrunA17_Chr7g0245521 | 71.795 | 273 | 75 | 1 | 1 | 271 | 1 | 273 | 2.12e-141 | 412 |
| Msa0603190 | MtrunA17_Chr6g0462631 | 59.337 | 332 | 91 | 3 | 86 | 415 | 8 | 297 | 2.09e-124 | 370 |
| Msa0603190 | MtrunA17_Chr6g0462751 | 54.728 | 349 | 99 | 3 | 65 | 411 | 12 | 303 | 4.34e-119 | 357 |
| Msa0603190 | MtrunA17_Chr7g0223761 | 48.677 | 378 | 150 | 2 | 239 | 615 | 3 | 337 | 1.24e-117 | 355 |
| Msa0603190 | MtrunA17_Chr7g0245531 | 57.962 | 314 | 130 | 2 | 303 | 616 | 2 | 313 | 5.47e-116 | 349 |
| Msa0603190 | MtrunA17_Chr1g0152001 | 54.882 | 297 | 129 | 5 | 313 | 608 | 1 | 293 | 3.66e-101 | 311 |
| Msa0603190 | MtrunA17_Chr1g0188601 | 74.346 | 191 | 49 | 0 | 90 | 280 | 1 | 191 | 4.82e-99 | 301 |
| Msa0603190 | MtrunA17_Chr5g0394391 | 36.581 | 503 | 292 | 10 | 9 | 494 | 29 | 521 | 5.07e-97 | 309 |
| Msa0603190 | MtrunA17_Chr7g0223671 | 70.811 | 185 | 54 | 0 | 72 | 256 | 8 | 192 | 1.43e-92 | 285 |
| Msa0603190 | MtrunA17_Chr1g0188611 | 53.872 | 297 | 127 | 4 | 320 | 615 | 1 | 288 | 1.51e-86 | 272 |
| Msa0603190 | MtrunA17_Chr6g0462791 | 71.023 | 176 | 50 | 1 | 106 | 281 | 1 | 175 | 1.03e-82 | 258 |
| Msa0603190 | MtrunA17_Chr2g0331901 | 33.406 | 461 | 289 | 5 | 10 | 457 | 4 | 459 | 1.53e-82 | 278 |
| Msa0603190 | MtrunA17_Chr4g0004331 | 34.475 | 438 | 271 | 4 | 10 | 434 | 4 | 438 | 1.18e-81 | 275 |
| Msa0603190 | MtrunA17_Chr5g0444001 | 34.426 | 427 | 271 | 4 | 10 | 430 | 4 | 427 | 2.27e-78 | 259 |
| Msa0603190 | MtrunA17_Chr3g0098761 | 33.810 | 420 | 273 | 4 | 10 | 428 | 4 | 419 | 2.03e-75 | 257 |
| Msa0603190 | MtrunA17_Chr7g0223771 | 72.549 | 153 | 42 | 0 | 92 | 244 | 2 | 154 | 1.91e-74 | 236 |
| Msa0603190 | MtrunA17_Chr5g0394221 | 42.638 | 326 | 175 | 5 | 265 | 587 | 35 | 351 | 3.38e-70 | 232 |
| Msa0603190 | MtrunA17_Chr4g0046881 | 72.340 | 141 | 36 | 1 | 133 | 273 | 14 | 151 | 3.07e-68 | 219 |
| Msa0603190 | MtrunA17_Chr4g0064621 | 33.984 | 512 | 306 | 11 | 9 | 496 | 140 | 643 | 3.01e-67 | 233 |
| Msa0603190 | MtrunA17_Chr4g0060241 | 32.143 | 504 | 307 | 14 | 10 | 496 | 21 | 506 | 4.09e-67 | 229 |
| Msa0603190 | MtrunA17_Chr6g0462691 | 69.014 | 142 | 44 | 0 | 320 | 461 | 1 | 142 | 2.04e-62 | 204 |
| Msa0603190 | MtrunA17_Chr6g0462701 | 62.651 | 166 | 38 | 1 | 103 | 268 | 27 | 168 | 1.71e-61 | 202 |
| Msa0603190 | MtrunA17_Chr5g0442171 | 37.463 | 339 | 181 | 9 | 168 | 491 | 1 | 323 | 5.88e-60 | 203 |
| Msa0603190 | MtrunA17_Chr3g0120101 | 26.748 | 572 | 374 | 12 | 10 | 544 | 27 | 590 | 9.25e-59 | 212 |
| Msa0603190 | MtrunA17_Chr7g0223861 | 70.992 | 131 | 38 | 0 | 76 | 206 | 4 | 134 | 3.63e-58 | 192 |
| Msa0603190 | MtrunA17_Chr7g0245541 | 48.259 | 201 | 103 | 1 | 416 | 616 | 1 | 200 | 1.47e-53 | 182 |
| Msa0603190 | MtrunA17_Chr5g0394231 | 39.207 | 227 | 87 | 4 | 72 | 297 | 5 | 181 | 1.32e-43 | 154 |
| Msa0603190 | MtrunA17_Chr6g0481391 | 59.836 | 122 | 46 | 1 | 36 | 157 | 13 | 131 | 1.21e-39 | 142 |
| Msa0603190 | MtrunA17_Chr4g0046871 | 71.429 | 98 | 27 | 1 | 337 | 434 | 9 | 105 | 1.65e-39 | 140 |
| Msa0603190 | MtrunA17_Chr6g0462621 | 76.056 | 71 | 17 | 0 | 1 | 71 | 1 | 71 | 3.77e-32 | 119 |
| Msa0603190 | MtrunA17_Chr7g0223691 | 78.082 | 73 | 14 | 1 | 1 | 71 | 1 | 73 | 9.24e-32 | 117 |
| Msa0603190 | MtrunA17_Chr1g0188591 | 75.342 | 73 | 16 | 1 | 1 | 71 | 1 | 73 | 2.79e-30 | 114 |
| Msa0603190 | MtrunA17_Chr2g0284661 | 71.084 | 83 | 24 | 0 | 366 | 448 | 61 | 143 | 3.16e-30 | 115 |
| Msa0603190 | MtrunA17_Chr2g0284661 | 50.820 | 61 | 28 | 1 | 223 | 281 | 5 | 65 | 1.65e-11 | 62.4 |
| Msa0603190 | MtrunA17_Chr6g0481381 | 70.270 | 74 | 22 | 0 | 174 | 247 | 1 | 74 | 4.80e-30 | 117 |
| Msa0603190 | MtrunA17_Chr6g0481381 | 37.374 | 99 | 61 | 1 | 515 | 612 | 75 | 173 | 6.59e-11 | 62.0 |
| Msa0603190 | MtrunA17_Chr7g0223881 | 61.333 | 75 | 28 | 1 | 286 | 360 | 9 | 82 | 5.64e-26 | 102 |
| Msa0603190 | MtrunA17_Chr7g0223791 | 64.634 | 82 | 21 | 3 | 54 | 135 | 18 | 91 | 2.90e-24 | 100 |
| Msa0603190 | MtrunA17_Chr7g0223791 | 46.739 | 92 | 49 | 0 | 482 | 573 | 90 | 181 | 5.10e-19 | 85.1 |
| Msa0603190 | MtrunA17_Chr2g0299941 | 76.667 | 60 | 14 | 0 | 398 | 457 | 23 | 82 | 1.45e-23 | 95.1 |
| Msa0603190 | MtrunA17_Chr7g0221651 | 53.571 | 84 | 39 | 0 | 213 | 296 | 1 | 84 | 3.16e-23 | 94.4 |
| Msa0603190 | MtrunA17_Chr4g0064651 | 46.739 | 92 | 49 | 0 | 396 | 487 | 29 | 120 | 1.91e-22 | 93.2 |
| Msa0603190 | MtrunA17_Chr2g0299891 | 93.023 | 43 | 3 | 0 | 313 | 355 | 1 | 43 | 1.48e-21 | 89.0 |
| Msa0603190 | MtrunA17_Chr7g0223871 | 38.889 | 126 | 76 | 1 | 491 | 615 | 7 | 132 | 1.01e-18 | 83.2 |
| Msa0603190 | MtrunA17_Chr6g0462801 | 64.615 | 65 | 18 | 1 | 320 | 379 | 1 | 65 | 1.78e-18 | 80.1 |
| Msa0603190 | MtrunA17_Chr5g0442161 | 31.126 | 151 | 99 | 3 | 9 | 155 | 28 | 177 | 2.60e-15 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0603190 | AT3G12580.1 | 92.320 | 651 | 47 | 2 | 1 | 649 | 1 | 650 | 0.0 | 1221 |
| Msa0603190 | AT5G02500.1 | 90.658 | 653 | 55 | 2 | 1 | 649 | 1 | 651 | 0.0 | 1213 |
| Msa0603190 | AT3G09440.1 | 90.783 | 651 | 56 | 2 | 1 | 649 | 1 | 649 | 0.0 | 1202 |
| Msa0603190 | AT3G09440.4 | 90.783 | 651 | 56 | 2 | 1 | 649 | 1 | 649 | 0.0 | 1202 |
| Msa0603190 | AT3G09440.2 | 90.783 | 651 | 56 | 2 | 1 | 649 | 1 | 649 | 0.0 | 1202 |
| Msa0603190 | AT3G09440.3 | 90.783 | 651 | 56 | 2 | 1 | 649 | 1 | 649 | 0.0 | 1202 |
| Msa0603190 | AT5G02490.1 | 89.297 | 654 | 64 | 2 | 1 | 649 | 1 | 653 | 0.0 | 1196 |
| Msa0603190 | AT1G16030.1 | 84.746 | 649 | 96 | 2 | 1 | 649 | 1 | 646 | 0.0 | 1137 |
| Msa0603190 | AT1G56410.1 | 87.399 | 619 | 76 | 1 | 1 | 619 | 1 | 617 | 0.0 | 1122 |
| Msa0603190 | AT5G42020.1 | 64.895 | 621 | 212 | 4 | 7 | 625 | 35 | 651 | 0.0 | 827 |
| Msa0603190 | AT5G42020.3 | 64.895 | 621 | 212 | 4 | 7 | 625 | 40 | 656 | 0.0 | 826 |
| Msa0603190 | AT5G28540.1 | 65.472 | 614 | 206 | 4 | 7 | 618 | 35 | 644 | 0.0 | 825 |
| Msa0603190 | AT1G09080.1 | 62.806 | 613 | 223 | 3 | 7 | 618 | 50 | 658 | 0.0 | 782 |
| Msa0603190 | AT1G09080.2 | 62.806 | 613 | 223 | 3 | 7 | 618 | 40 | 648 | 0.0 | 782 |
| Msa0603190 | AT5G02500.2 | 92.893 | 394 | 28 | 0 | 1 | 394 | 1 | 394 | 0.0 | 771 |
| Msa0603190 | AT5G02500.2 | 76.087 | 138 | 27 | 2 | 516 | 649 | 386 | 521 | 5.86e-54 | 193 |
| Msa0603190 | AT5G42020.2 | 58.615 | 621 | 196 | 9 | 7 | 625 | 35 | 596 | 0.0 | 695 |
| Msa0603190 | AT5G09590.1 | 51.858 | 592 | 259 | 9 | 10 | 594 | 60 | 632 | 0.0 | 560 |
| Msa0603190 | AT4G24280.1 | 49.251 | 601 | 281 | 10 | 10 | 605 | 81 | 662 | 0.0 | 538 |
| Msa0603190 | AT5G49910.1 | 48.315 | 623 | 295 | 11 | 10 | 624 | 81 | 684 | 0.0 | 535 |
| Msa0603190 | AT4G37910.1 | 52.076 | 578 | 251 | 9 | 10 | 580 | 55 | 613 | 0.0 | 531 |
| Msa0603190 | AT4G37910.2 | 52.076 | 578 | 251 | 9 | 10 | 580 | 55 | 613 | 0.0 | 531 |
| Msa0603190 | AT2G32120.1 | 34.180 | 512 | 309 | 9 | 9 | 508 | 30 | 525 | 1.58e-87 | 284 |
| Msa0603190 | AT2G32120.2 | 34.180 | 512 | 309 | 9 | 9 | 508 | 30 | 525 | 1.58e-87 | 284 |
| Msa0603190 | AT1G79930.2 | 35.388 | 438 | 267 | 4 | 10 | 434 | 4 | 438 | 3.00e-86 | 286 |
| Msa0603190 | AT1G79930.1 | 35.388 | 438 | 267 | 4 | 10 | 434 | 4 | 438 | 4.02e-86 | 287 |
| Msa0603190 | AT1G79920.1 | 35.388 | 438 | 267 | 4 | 10 | 434 | 4 | 438 | 5.09e-85 | 282 |
| Msa0603190 | AT1G79920.3 | 35.388 | 438 | 267 | 4 | 10 | 434 | 4 | 438 | 7.32e-85 | 281 |
| Msa0603190 | AT1G79920.2 | 35.388 | 438 | 267 | 4 | 10 | 434 | 4 | 438 | 7.32e-85 | 281 |
| Msa0603190 | AT1G79920.4 | 35.388 | 438 | 267 | 4 | 10 | 434 | 4 | 438 | 7.32e-85 | 281 |
| Msa0603190 | AT1G11660.4 | 27.515 | 676 | 401 | 12 | 10 | 619 | 4 | 656 | 6.21e-84 | 280 |
| Msa0603190 | AT1G11660.3 | 27.515 | 676 | 401 | 12 | 10 | 619 | 4 | 656 | 6.21e-84 | 280 |
| Msa0603190 | AT1G11660.1 | 27.515 | 676 | 401 | 12 | 10 | 619 | 4 | 656 | 6.21e-84 | 280 |
| Msa0603190 | AT1G11660.2 | 27.613 | 641 | 375 | 12 | 45 | 619 | 2 | 619 | 1.10e-75 | 257 |
| Msa0603190 | AT4G16660.2 | 25.487 | 718 | 423 | 16 | 5 | 615 | 46 | 758 | 1.87e-62 | 223 |
| Msa0603190 | AT4G16660.1 | 25.766 | 718 | 421 | 17 | 5 | 615 | 22 | 734 | 2.87e-61 | 219 |
Find 183 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTAGGAATGGTTGTGTTTC+TGG | 0.103620 | 4_2:-47402431 | None:intergenic |
| AAGGATGCCGGTGTCATTTC+TGG | 0.156592 | 4_2:+47401656 | Msa0603190:CDS |
| CATCTTCTCAATTTCCTCTT+TGG | 0.183600 | 4_2:-47402719 | None:intergenic |
| GCAGGAGAACTCTTCAATTT+TGG | 0.189005 | 4_2:+47403423 | Msa0603190:three_prime_UTR |
| GAAAATTTGTTGAGAGATTA+TGG | 0.206747 | 4_2:+47400509 | Msa0603190:exon |
| TCTTGAATTCTTGAACAAAA+TGG | 0.242578 | 4_2:-47401904 | None:intergenic |
| AGCCTGTGGAGAAGTGTTTA+AGG | 0.261872 | 4_2:+47402131 | Msa0603190:CDS |
| TTGCTGGAAATTTAATAATC+AGG | 0.300996 | 4_2:+47403386 | Msa0603190:three_prime_UTR |
| CCAACCTGGTGTGCTGATTC+AGG | 0.309133 | 4_2:+47402489 | Msa0603190:CDS |
| TCAGATGCTAAGCGATTAAT+TGG | 0.310966 | 4_2:+47401380 | Msa0603190:intron |
| TACTCCTCTCTCCCTTGGTT+TGG | 0.315513 | 4_2:+47402375 | Msa0603190:CDS |
| ATTTGTTTGAAGTTGGTAAT+TGG | 0.317398 | 4_2:+47403447 | Msa0603190:three_prime_UTR |
| TTAATCAACTTCCTCAATCT+TGG | 0.333860 | 4_2:-47403097 | None:intergenic |
| TGAAAACACCTGCTCCTTCT+TGG | 0.336551 | 4_2:-47402452 | None:intergenic |
| ACCTGCGATTGGAATCGATT+TGG | 0.340588 | 4_2:+47400548 | Msa0603190:CDS |
| TGGCCGTTCAAGGTCATTCC+TGG | 0.343735 | 4_2:+47401446 | Msa0603190:CDS |
| GCTGGCAGTGGAAGCGGTGC+TGG | 0.344996 | 4_2:+47403072 | Msa0603190:CDS |
| CCTGCGATTGGAATCGATTT+GGG | 0.346174 | 4_2:+47400549 | Msa0603190:CDS |
| CCTGATGAGGCTGTTGCTTA+TGG | 0.347444 | 4_2:+47402280 | Msa0603190:CDS |
| TGCAAAAGTTGTTGAACCTT+GGG | 0.350273 | 4_2:-47402217 | None:intergenic |
| ATTAAGCTAAACTTTGTTCA+TGG | 0.354002 | 4_2:+47403115 | Msa0603190:exon |
| TACTGCTGGTGATACACATT+TGG | 0.354173 | 4_2:+47401850 | Msa0603190:CDS |
| TGATACATCCTAGCAATGAT+AGG | 0.362378 | 4_2:-47403000 | None:intergenic |
| TCTCGTCAGTGTAATTCTTT+CGG | 0.362652 | 4_2:+47403230 | Msa0603190:three_prime_UTR |
| AGCTCAATATGGATTTGTTT+AGG | 0.363242 | 4_2:+47402098 | Msa0603190:CDS |
| AACTTTGTTCATGGGATTGA+TGG | 0.364747 | 4_2:+47403124 | Msa0603190:three_prime_UTR |
| GTACATGATGTTGTTCTTGT+TGG | 0.371328 | 4_2:+47402178 | Msa0603190:CDS |
| GTAGGAATGGTTGTGTTTCT+GGG | 0.381013 | 4_2:-47402430 | None:intergenic |
| TTATAGTTCACCACAATCAT+AGG | 0.383446 | 4_2:-47401482 | None:intergenic |
| CCATAAGCAACAGCCTCATC+AGG | 0.383744 | 4_2:-47402280 | None:intergenic |
| CATATTCATGTGTTGGTGTT+TGG | 0.389658 | 4_2:+47400577 | Msa0603190:CDS |
| GGATTTGTTTAGGAAGTGTA+TGG | 0.401845 | 4_2:+47402108 | Msa0603190:CDS |
| TTACCGAAAACAGTGTTAGT+AGG | 0.404952 | 4_2:-47400723 | None:intergenic |
| CCTGCTGCTGGCAGTGGAAG+CGG | 0.405341 | 4_2:+47403066 | Msa0603190:CDS |
| GATGTTACTCCTCTCTCCCT+TGG | 0.408263 | 4_2:+47402370 | Msa0603190:CDS |
| CTCAATCTTCTAAGAGCCCT+TGG | 0.408771 | 4_2:-47401956 | None:intergenic |
| TGTGTTTATCAGTACGTAAT+GGG | 0.409539 | 4_2:+47403357 | Msa0603190:three_prime_UTR |
| CAAGGTGCTGGTGGTGATGC+TGG | 0.412390 | 4_2:+47403021 | Msa0603190:CDS |
| CATGAAATTGTGGCCGTTCA+AGG | 0.412524 | 4_2:+47401436 | Msa0603190:CDS |
| CATGATGTTGTTCTTGTTGG+TGG | 0.420045 | 4_2:+47402181 | Msa0603190:CDS |
| GAGATTGCAGAGGCTTATCT+TGG | 0.422742 | 4_2:+47401566 | Msa0603190:CDS |
| ACGTAATGGGTACTGTTTGC+TGG | 0.423572 | 4_2:+47403370 | Msa0603190:three_prime_UTR |
| TGAAATTGATTCATTGTTTG+AGG | 0.423673 | 4_2:+47402033 | Msa0603190:CDS |
| GGAAAGCCTACCCTTGTCAT+TGG | 0.428458 | 4_2:-47402698 | None:intergenic |
| GACTCGTGATAACAATTTGT+TGG | 0.428667 | 4_2:+47402534 | Msa0603190:CDS |
| CAAAGAGGAAATTGAGAAGA+TGG | 0.433532 | 4_2:+47402720 | Msa0603190:CDS |
| GGGTATCCCTCCTGCTCCAA+GGG | 0.435715 | 4_2:+47402573 | Msa0603190:CDS |
| CTGTGTTTATCAGTACGTAA+TGG | 0.436173 | 4_2:+47403356 | Msa0603190:three_prime_UTR |
| TAGGAGAATCAGCGATGTTT+CGG | 0.437308 | 4_2:+47401403 | Msa0603190:CDS |
| TTGCAAAAGTTGTTGAACCT+TGG | 0.441982 | 4_2:-47402218 | None:intergenic |
| TAATCAACTTCCTCAATCTT+GGG | 0.446332 | 4_2:-47403096 | None:intergenic |
| TTGGGCAAATTTGAGTTGTC+GGG | 0.450094 | 4_2:+47402553 | Msa0603190:CDS |
| TGGAGAGGCTGATGAATTTG+AGG | 0.450186 | 4_2:+47402945 | Msa0603190:CDS |
| TCCCTTGGTTTGGAGACTGC+AGG | 0.450627 | 4_2:+47402385 | Msa0603190:CDS |
| ATTTGTTGAGAGATTATGGC+TGG | 0.452082 | 4_2:+47400513 | Msa0603190:exon |
| GACAAGAAGGCTACAAGTAC+TGG | 0.452597 | 4_2:+47401737 | Msa0603190:CDS |
| CTGCTCCTTCTTGGTAGGAA+TGG | 0.452909 | 4_2:-47402443 | None:intergenic |
| GTTGGGCAAATTTGAGTTGT+CGG | 0.456584 | 4_2:+47402552 | Msa0603190:CDS |
| CGGGTATCCCTCCTGCTCCA+AGG | 0.460140 | 4_2:+47402572 | Msa0603190:CDS |
| ACTGCTGGTGATACACATTT+GGG | 0.462462 | 4_2:+47401851 | Msa0603190:CDS |
| GATGGTCCTGCTGCTGGCAG+TGG | 0.462691 | 4_2:+47403060 | Msa0603190:CDS |
| TTATGTTGCTTTCACTGATA+CGG | 0.463481 | 4_2:+47400656 | Msa0603190:CDS |
| ACTGCCGCTGCTATTGCCTA+TGG | 0.464087 | 4_2:+47401710 | Msa0603190:CDS |
| CATGGTTCTTATGAAGATGA+AGG | 0.464118 | 4_2:+47401544 | Msa0603190:CDS |
| GATGAAGATGGTCCTGCTGC+TGG | 0.465181 | 4_2:+47403054 | Msa0603190:CDS |
| ACTCGTGATAACAATTTGTT+GGG | 0.474189 | 4_2:+47402535 | Msa0603190:CDS |
| TGAGATCATAGCAAACGATC+AGG | 0.474343 | 4_2:+47400614 | Msa0603190:CDS |
| GTGTTTAAGGGATGCTAAGA+TGG | 0.480423 | 4_2:+47402144 | Msa0603190:CDS |
| GAAAATTGAAGATGCTATTG+AGG | 0.480599 | 4_2:+47402891 | Msa0603190:CDS |
| CAATGAATCAATTTCAATGG+TGG | 0.482628 | 4_2:-47402026 | None:intergenic |
| TTAAGCTAAACTTTGTTCAT+GGG | 0.484479 | 4_2:+47403116 | Msa0603190:exon |
| ATAGGCAATAGCAGCGGCAG+TGG | 0.488775 | 4_2:-47401708 | None:intergenic |
| CCGCTTCCACTGCCAGCAGC+AGG | 0.490175 | 4_2:-47403066 | None:intergenic |
| TATTGAGGAAGGTATCTTTG+AGG | 0.490881 | 4_2:+47401820 | Msa0603190:CDS |
| GCAAGATTTCTTCAATGGAA+AGG | 0.494283 | 4_2:+47402237 | Msa0603190:CDS |
| TGTTTCACTTCTTACTATTG+AGG | 0.495641 | 4_2:+47401805 | Msa0603190:CDS |
| AAACAATGAATCAATTTCAA+TGG | 0.497295 | 4_2:-47402029 | None:intergenic |
| ATTCAAGAGGAAGAATAAGA+AGG | 0.502948 | 4_2:+47401919 | Msa0603190:CDS |
| ACTGATACGGAACGTTTGAT+CGG | 0.504694 | 4_2:+47400669 | Msa0603190:CDS |
| GAAATTGATTCATTGTTTGA+GGG | 0.510562 | 4_2:+47402034 | Msa0603190:CDS |
| TGCCTATGGTCTTGACAAGA+AGG | 0.512155 | 4_2:+47401724 | Msa0603190:CDS |
| TGCTGAAGAGATATCTTCCA+TGG | 0.512232 | 4_2:+47401526 | Msa0603190:CDS |
| TGAGGAACACCCCTTGGAGC+AGG | 0.513433 | 4_2:-47402583 | None:intergenic |
| CTGCTTGTGAGAGAGCTAAG+AGG | 0.514038 | 4_2:+47401981 | Msa0603190:CDS |
| TACCGAAAACAGTGTTAGTA+GGG | 0.517002 | 4_2:-47400722 | None:intergenic |
| AAGAATAAGAAGGATATTAG+CGG | 0.517633 | 4_2:+47401929 | Msa0603190:CDS |
| ATAGGTTTGTCAGCAGGGCC+AGG | 0.524557 | 4_2:-47401464 | None:intergenic |
| GGAAATTGAGAAGATGGTGC+AGG | 0.525352 | 4_2:+47402726 | Msa0603190:CDS |
| ATGCTAAGCGATTAATTGGT+AGG | 0.528922 | 4_2:+47401384 | Msa0603190:CDS |
| AAAATTGAAGATGCTATTGA+GGG | 0.529908 | 4_2:+47402892 | Msa0603190:CDS |
| CGGTGCTGGTCCCAAGATTG+AGG | 0.530030 | 4_2:+47403086 | Msa0603190:CDS |
| TGAGGACAAGATGAAGGAGC+TGG | 0.532976 | 4_2:+47402963 | Msa0603190:CDS |
| CACCGCTCAAAATAGCAGCT+TGG | 0.534910 | 4_2:-47402312 | None:intergenic |
| GGGCCAGGAATGACCTTGAA+CGG | 0.539439 | 4_2:-47401449 | None:intergenic |
| AAAGGTGAAGGACCTGCGAT+TGG | 0.542152 | 4_2:+47400537 | Msa0603190:CDS |
| CAATCATAGGTTTGTCAGCA+GGG | 0.542843 | 4_2:-47401469 | None:intergenic |
| ACTTTGTTCATGGGATTGAT+GGG | 0.542929 | 4_2:+47403125 | Msa0603190:three_prime_UTR |
| TCAGTGAAAGCAACATAAGA+AGG | 0.544801 | 4_2:-47400651 | None:intergenic |
| TGTGAATCGTTGAAGTATGC+AGG | 0.545254 | 4_2:-47401620 | None:intergenic |
| AGGATATTAGCGGAAATCCA+AGG | 0.545644 | 4_2:+47401939 | Msa0603190:CDS |
| CTTGGTTTGGAGACTGCAGG+AGG | 0.546406 | 4_2:+47402388 | Msa0603190:CDS |
| ACAATCATAGGTTTGTCAGC+AGG | 0.547735 | 4_2:-47401470 | None:intergenic |
| CCCAAATCGATTCCAATCGC+AGG | 0.548277 | 4_2:-47400549 | None:intergenic |
| GCCTGTGGAGAAGTGTTTAA+GGG | 0.550982 | 4_2:+47402132 | Msa0603190:CDS |
| AATGGTGGTTTGAGCAGTAG+AGG | 0.553384 | 4_2:-47402011 | None:intergenic |
| TGAGAGATTATGGCTGGAAA+AGG | 0.553396 | 4_2:+47400519 | Msa0603190:exon |
| TCAGCAGAGGACAAGACCAC+AGG | 0.553510 | 4_2:+47402652 | Msa0603190:CDS |
| GGGGCTATTCAATGGTTGGA+TGG | 0.553727 | 4_2:+47402913 | Msa0603190:CDS |
| TTTGCAACCCTATCATTGCT+AGG | 0.554597 | 4_2:+47402992 | Msa0603190:CDS |
| ATCATTGCTAGGATGTATCA+AGG | 0.555326 | 4_2:+47403003 | Msa0603190:CDS |
| TTCAAAACGAGCACGAGTAA+TGG | 0.556929 | 4_2:-47402074 | None:intergenic |
| TGGTGATGCTGGAGGAGCCA+TGG | 0.557888 | 4_2:+47403032 | Msa0603190:CDS |
| GTGATCTGAGGAACACCCCT+TGG | 0.562871 | 4_2:-47402589 | None:intergenic |
| TCCCTTAAACACTTCTCCAC+AGG | 0.563569 | 4_2:-47402133 | None:intergenic |
| CAGGCAAGAAATTTGCAAGC+AGG | 0.566745 | 4_2:+47403405 | Msa0603190:three_prime_UTR |
| GTCTCCAAACCAAGGGAGAG+AGG | 0.567259 | 4_2:-47402379 | None:intergenic |
| GGAACAACATATTCATGTGT+TGG | 0.568612 | 4_2:+47400570 | Msa0603190:CDS |
| GGAACACCCCTTGGAGCAGG+AGG | 0.568941 | 4_2:-47402580 | None:intergenic |
| GATACATCCTAGCAATGATA+GGG | 0.569465 | 4_2:-47402999 | None:intergenic |
| TAGGCAATAGCAGCGGCAGT+GGG | 0.574624 | 4_2:-47401707 | None:intergenic |
| AGCAGGACCATCTTCATCCA+TGG | 0.574951 | 4_2:-47403049 | None:intergenic |
| TGAATTTGAGGACAAGATGA+AGG | 0.575031 | 4_2:+47402957 | Msa0603190:CDS |
| GCTAGGATGTATCAAGGTGC+TGG | 0.576167 | 4_2:+47403009 | Msa0603190:CDS |
| AAAGTACAAGTCTGAGGACG+AGG | 0.578393 | 4_2:+47402756 | Msa0603190:CDS |
| CTTCATCTTCATAAGAACCA+TGG | 0.578877 | 4_2:-47401543 | None:intergenic |
| CACAACCATTCCTACCAAGA+AGG | 0.580287 | 4_2:+47402438 | Msa0603190:CDS |
| CATTCCTACCAAGAAGGAGC+AGG | 0.582400 | 4_2:+47402444 | Msa0603190:CDS |
| TGAGGGTAATGAGAAAGTAC+AGG | 0.583385 | 4_2:+47402333 | Msa0603190:CDS |
| TCACTTCTTACTATTGAGGA+AGG | 0.584344 | 4_2:+47401809 | Msa0603190:CDS |
| TTCTTGTTGGTGGATCGACT+AGG | 0.585926 | 4_2:+47402191 | Msa0603190:CDS |
| TTTCTGGACTCAATGTGTTG+AGG | 0.587988 | 4_2:+47401672 | Msa0603190:CDS |
| CAATCACCAATGACAAGGGT+AGG | 0.589395 | 4_2:+47402692 | Msa0603190:CDS |
| TGCTTTGACATTGATGCCAA+CGG | 0.589749 | 4_2:+47402616 | Msa0603190:CDS |
| TAGTAGGGTTCATAGCAACT+TGG | 0.589835 | 4_2:-47400707 | None:intergenic |
| TCCTGCAGTCTCCAAACCAA+GGG | 0.590338 | 4_2:-47402386 | None:intergenic |
| CTCCTGCAGTCTCCAAACCA+AGG | 0.595424 | 4_2:-47402387 | None:intergenic |
| ATGGGTGGTTCATGATTGCA+AGG | 0.596040 | 4_2:+47403143 | Msa0603190:three_prime_UTR |
| AAAACTATGCATACAACATG+AGG | 0.597334 | 4_2:+47402815 | Msa0603190:CDS |
| CAGCAGAGGACAAGACCACA+GGG | 0.598328 | 4_2:+47402653 | Msa0603190:CDS |
| TTGTTCATGGGATTGATGGG+TGG | 0.598913 | 4_2:+47403128 | Msa0603190:three_prime_UTR |
| AGCCTTCTTGTCAAGACCAT+AGG | 0.599068 | 4_2:-47401726 | None:intergenic |
| TGGTTGGATGGAAATCAACT+TGG | 0.605882 | 4_2:+47402925 | Msa0603190:CDS |
| TAGACCTGAATCAGCACACC+AGG | 0.606163 | 4_2:-47402493 | None:intergenic |
| CAAGGGTAGGCTTTCCAAAG+AGG | 0.607535 | 4_2:+47402705 | Msa0603190:CDS |
| TTTGAGGTGAAAGCTACTGC+TGG | 0.609989 | 4_2:+47401836 | Msa0603190:CDS |
| GGATATTAGCGGAAATCCAA+GGG | 0.611329 | 4_2:+47401940 | Msa0603190:CDS |
| TGAGACATTCAGAATACCGT+TGG | 0.615112 | 4_2:-47402632 | None:intergenic |
| ACCAGGTTGGTTATCAGAGT+AGG | 0.621601 | 4_2:-47402476 | None:intergenic |
| GACAAGATGAAGGAGCTGGA+GGG | 0.622357 | 4_2:+47402967 | Msa0603190:CDS |
| TACAGAGTGACATGAAATTG+TGG | 0.624043 | 4_2:+47401426 | Msa0603190:CDS |
| CGTCAAGCTACAAAGGATGC+CGG | 0.624953 | 4_2:+47401644 | Msa0603190:CDS |
| TTCACAACGTCAAGCTACAA+AGG | 0.626174 | 4_2:+47401637 | Msa0603190:CDS |
| TAAGAGCATCAACCCTGATG+AGG | 0.628505 | 4_2:+47402267 | Msa0603190:CDS |
| GAGATCATAGCAAACGATCA+GGG | 0.629271 | 4_2:+47400615 | Msa0603190:CDS |
| ATTATGGCTGGAAAAGGTGA+AGG | 0.630083 | 4_2:+47400525 | Msa0603190:exon |
| GGATGGAAATCAACTTGGAG+AGG | 0.632319 | 4_2:+47402930 | Msa0603190:CDS |
| TGCTGACAAACCTATGATTG+TGG | 0.632591 | 4_2:+47401472 | Msa0603190:CDS |
| GGAGGAGCCATGGATGAAGA+TGG | 0.633207 | 4_2:+47403042 | Msa0603190:CDS |
| CATAAGCAACAGCCTCATCA+GGG | 0.633756 | 4_2:-47402279 | None:intergenic |
| AACACCTGCTCCTTCTTGGT+AGG | 0.634088 | 4_2:-47402448 | None:intergenic |
| CCTGAATCAGCACACCAGGT+TGG | 0.637157 | 4_2:-47402489 | None:intergenic |
| GGACAAGATGAAGGAGCTGG+AGG | 0.638733 | 4_2:+47402966 | Msa0603190:CDS |
| ACCTACTCTGATAACCAACC+TGG | 0.640169 | 4_2:+47402475 | Msa0603190:CDS |
| TCAAAGCAAACAGTGATCTG+AGG | 0.640283 | 4_2:-47402601 | None:intergenic |
| GAAGATGAAGGAGATTGCAG+AGG | 0.642514 | 4_2:+47401556 | Msa0603190:CDS |
| GATTACAATCACCAATGACA+AGG | 0.645567 | 4_2:+47402687 | Msa0603190:CDS |
| GGTGCTGGTGGTGATGCTGG+AGG | 0.646421 | 4_2:+47403024 | Msa0603190:CDS |
| AGGATGTATCAAGGTGCTGG+TGG | 0.649243 | 4_2:+47403012 | Msa0603190:CDS |
| AATTGAAGATGCTATTGAGG+GGG | 0.652473 | 4_2:+47402894 | Msa0603190:CDS |
| TGCTGAAAAGTACAAGTCTG+AGG | 0.657032 | 4_2:+47402750 | Msa0603190:CDS |
| TGGATCGACTAGGATTCCCA+AGG | 0.664968 | 4_2:+47402201 | Msa0603190:CDS |
| TCTACGAAGGAGAAAGAACA+AGG | 0.674145 | 4_2:+47402512 | Msa0603190:CDS |
| GTGCTGATTCAGGTCTACGA+AGG | 0.676079 | 4_2:+47402499 | Msa0603190:CDS |
| TATTCTGAATGTCTCAGCAG+AGG | 0.676206 | 4_2:+47402639 | Msa0603190:CDS |
| TAGGAAGTGTATGGAGCCTG+TGG | 0.676933 | 4_2:+47402117 | Msa0603190:CDS |
| GGTATCCCTCCTGCTCCAAG+GGG | 0.680067 | 4_2:+47402574 | Msa0603190:CDS |
| ATTACAATCACCAATGACAA+GGG | 0.682522 | 4_2:+47402688 | Msa0603190:CDS |
| GAACACCCCTTGGAGCAGGA+GGG | 0.684051 | 4_2:-47402579 | None:intergenic |
| AAATTGAAGATGCTATTGAG+GGG | 0.691800 | 4_2:+47402893 | Msa0603190:CDS |
| TGTGGTGAACTATAAAGCTG+AGG | 0.717089 | 4_2:+47401490 | Msa0603190:CDS |
| ATTGAGTCCAGAAATGACAC+CGG | 0.717355 | 4_2:-47401663 | None:intergenic |
| AAGACCATAGGCAATAGCAG+CGG | 0.731023 | 4_2:-47401714 | None:intergenic |
| GCTGGTGATACACATTTGGG+AGG | 0.733697 | 4_2:+47401854 | Msa0603190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTAAAAAAAACAGATTAA+TGG | - | chr4_2:47400956-47400975 | None:intergenic | 10.0% |
| !! | TTGTACATATACATAATTAT+AGG | + | chr4_2:47401170-47401189 | Msa0603190:intron | 15.0% |
| !! | CTGAAAAAGAATAAAAACTT+CGG | - | chr4_2:47400783-47400802 | None:intergenic | 20.0% |
| !!! | ATAAGGTAGAAAAGTATAAA+AGG | + | chr4_2:47401005-47401024 | Msa0603190:intron | 20.0% |
| !!! | AAAAGTATAAAAGGTAGAAA+AGG | + | chr4_2:47401014-47401033 | Msa0603190:intron | 20.0% |
| !! | AAAGTATAAAAGGTAGAAAA+GGG | + | chr4_2:47401015-47401034 | Msa0603190:intron | 20.0% |
| !! | AAACAATGAATCAATTTCAA+TGG | - | chr4_2:47402032-47402051 | None:intergenic | 20.0% |
| !!! | TGTTTTGATTTAGATAATGT+AGG | + | chr4_2:47403198-47403217 | Msa0603190:three_prime_UTR | 20.0% |
| !!! | GTTTTGATTTAGATAATGTA+GGG | + | chr4_2:47403199-47403218 | Msa0603190:three_prime_UTR | 20.0% |
| ! | TCGAATGAATCAAAAAACTA+GGG | - | chr4_2:47400482-47400501 | None:intergenic | 25.0% |
| ! | ATCGAATGAATCAAAAAACT+AGG | - | chr4_2:47400483-47400502 | None:intergenic | 25.0% |
| !!! | GAAAATTTGTTGAGAGATTA+TGG | + | chr4_2:47400509-47400528 | Msa0603190:exon | 25.0% |
| !!! | TGAAGATTTTGATAACAGAA+TGG | + | chr4_2:47401877-47401896 | Msa0603190:CDS | 25.0% |
| ! | TCTTGAATTCTTGAACAAAA+TGG | - | chr4_2:47401907-47401926 | None:intergenic | 25.0% |
| !! | ATTTTGTTCAAGAATTCAAG+AGG | + | chr4_2:47401906-47401925 | Msa0603190:CDS | 25.0% |
| ! | AAGAATAAGAAGGATATTAG+CGG | + | chr4_2:47401929-47401948 | Msa0603190:CDS | 25.0% |
| !! | TGAAATTGATTCATTGTTTG+AGG | + | chr4_2:47402033-47402052 | Msa0603190:CDS | 25.0% |
| !! | GAAATTGATTCATTGTTTGA+GGG | + | chr4_2:47402034-47402053 | Msa0603190:CDS | 25.0% |
| ! | AAAATTGAAGATGCTATTGA+GGG | + | chr4_2:47402892-47402911 | Msa0603190:CDS | 25.0% |
| ! | ATTAAGCTAAACTTTGTTCA+TGG | + | chr4_2:47403115-47403134 | Msa0603190:exon | 25.0% |
| ! | TTAAGCTAAACTTTGTTCAT+GGG | + | chr4_2:47403116-47403135 | Msa0603190:exon | 25.0% |
| !!! | TTCGGTTTTAATCTTAATGA+TGG | + | chr4_2:47403248-47403267 | Msa0603190:three_prime_UTR | 25.0% |
| ! | TTGCTGGAAATTTAATAATC+AGG | + | chr4_2:47403386-47403405 | Msa0603190:three_prime_UTR | 25.0% |
| !!! | TTTTGGTATTTGTTTGAAGT+TGG | + | chr4_2:47403440-47403459 | Msa0603190:three_prime_UTR | 25.0% |
| !! | TTTTGATTCATTCGATCGAA+CGG | + | chr4_2:47400487-47400506 | Msa0603190:five_prime_UTR | 30.0% |
| !! | TTATGTTGCTTTCACTGATA+CGG | + | chr4_2:47400656-47400675 | Msa0603190:CDS | 30.0% |
| ATAAAAACTTCGGAAGACTA+AGG | - | chr4_2:47400773-47400792 | None:intergenic | 30.0% | |
| ! | CTGAGAGTAGTTTGTATATA+AGG | + | chr4_2:47400988-47401007 | Msa0603190:intron | 30.0% |
| ! | TGCTGATCATAATTTTGCAT+TGG | + | chr4_2:47401224-47401243 | Msa0603190:intron | 30.0% |
| TCAGAGCATAATAGTAGAAA+AGG | + | chr4_2:47401283-47401302 | Msa0603190:intron | 30.0% | |
| CAGAGCATAATAGTAGAAAA+GGG | + | chr4_2:47401284-47401303 | Msa0603190:intron | 30.0% | |
| GTTTCAGTATTTGTCAAGAA+TGG | + | chr4_2:47401316-47401335 | Msa0603190:intron | 30.0% | |
| TTATAGTTCACCACAATCAT+AGG | - | chr4_2:47401485-47401504 | None:intergenic | 30.0% | |
| !!! | AACGTTCTTATTTTCGATCT+TGG | + | chr4_2:47401767-47401786 | Msa0603190:CDS | 30.0% |
| TGTTTCACTTCTTACTATTG+AGG | + | chr4_2:47401805-47401824 | Msa0603190:CDS | 30.0% | |
| ATTCAAGAGGAAGAATAAGA+AGG | + | chr4_2:47401919-47401938 | Msa0603190:CDS | 30.0% | |
| CAATGAATCAATTTCAATGG+TGG | - | chr4_2:47402029-47402048 | None:intergenic | 30.0% | |
| ! | AGCTCAATATGGATTTGTTT+AGG | + | chr4_2:47402098-47402117 | Msa0603190:CDS | 30.0% |
| ! | CTTTTGCAAGATTTCTTCAA+TGG | + | chr4_2:47402232-47402251 | Msa0603190:CDS | 30.0% |
| ! | ACTCGTGATAACAATTTGTT+GGG | + | chr4_2:47402535-47402554 | Msa0603190:CDS | 30.0% |
| ATTACAATCACCAATGACAA+GGG | + | chr4_2:47402688-47402707 | Msa0603190:CDS | 30.0% | |
| !!! | ATAGTTTTCAAGTGCATTCT+TGG | - | chr4_2:47402803-47402822 | None:intergenic | 30.0% |
| AAAACTATGCATACAACATG+AGG | + | chr4_2:47402815-47402834 | Msa0603190:CDS | 30.0% | |
| GAAAATTGAAGATGCTATTG+AGG | + | chr4_2:47402891-47402910 | Msa0603190:CDS | 30.0% | |
| AAATTGAAGATGCTATTGAG+GGG | + | chr4_2:47402893-47402912 | Msa0603190:CDS | 30.0% | |
| TAATCAACTTCCTCAATCTT+GGG | - | chr4_2:47403099-47403118 | None:intergenic | 30.0% | |
| TTAATCAACTTCCTCAATCT+TGG | - | chr4_2:47403100-47403119 | None:intergenic | 30.0% | |
| TGTGTTTATCAGTACGTAAT+GGG | + | chr4_2:47403357-47403376 | Msa0603190:three_prime_UTR | 30.0% | |
| ! | ATTTGTTGAGAGATTATGGC+TGG | + | chr4_2:47400513-47400532 | Msa0603190:exon | 35.0% |
| GGAACAACATATTCATGTGT+TGG | + | chr4_2:47400570-47400589 | Msa0603190:CDS | 35.0% | |
| ! | CATATTCATGTGTTGGTGTT+TGG | + | chr4_2:47400577-47400596 | Msa0603190:CDS | 35.0% |
| TCAGTGAAAGCAACATAAGA+AGG | - | chr4_2:47400654-47400673 | None:intergenic | 35.0% | |
| ! | AACCCTACTAACACTGTTTT+CGG | + | chr4_2:47400720-47400739 | Msa0603190:CDS | 35.0% |
| TACCGAAAACAGTGTTAGTA+GGG | - | chr4_2:47400725-47400744 | None:intergenic | 35.0% | |
| TTACCGAAAACAGTGTTAGT+AGG | - | chr4_2:47400726-47400745 | None:intergenic | 35.0% | |
| TCGGAAGACTAAGGATTAAT+AGG | - | chr4_2:47400764-47400783 | None:intergenic | 35.0% | |
| CTGATTGTGTTTGCTTGAAT+TGG | + | chr4_2:47401352-47401371 | Msa0603190:intron | 35.0% | |
| TCAGATGCTAAGCGATTAAT+TGG | + | chr4_2:47401380-47401399 | Msa0603190:intron | 35.0% | |
| ATGCTAAGCGATTAATTGGT+AGG | + | chr4_2:47401384-47401403 | Msa0603190:CDS | 35.0% | |
| TACAGAGTGACATGAAATTG+TGG | + | chr4_2:47401426-47401445 | Msa0603190:CDS | 35.0% | |
| CTTCATCTTCATAAGAACCA+TGG | - | chr4_2:47401546-47401565 | None:intergenic | 35.0% | |
| CATGGTTCTTATGAAGATGA+AGG | + | chr4_2:47401544-47401563 | Msa0603190:CDS | 35.0% | |
| !!! | GTTCTTATTTTCGATCTTGG+TGG | + | chr4_2:47401770-47401789 | Msa0603190:CDS | 35.0% |
| TCACTTCTTACTATTGAGGA+AGG | + | chr4_2:47401809-47401828 | Msa0603190:CDS | 35.0% | |
| !! | TATTGAGGAAGGTATCTTTG+AGG | + | chr4_2:47401820-47401839 | Msa0603190:CDS | 35.0% |
| !!! | TCGTTTTGAAGAGCTCAATA+TGG | + | chr4_2:47402087-47402106 | Msa0603190:CDS | 35.0% |
| ! | GGATTTGTTTAGGAAGTGTA+TGG | + | chr4_2:47402108-47402127 | Msa0603190:CDS | 35.0% |
| GTACATGATGTTGTTCTTGT+TGG | + | chr4_2:47402178-47402197 | Msa0603190:CDS | 35.0% | |
| TGCAAAAGTTGTTGAACCTT+GGG | - | chr4_2:47402220-47402239 | None:intergenic | 35.0% | |
| TTGCAAAAGTTGTTGAACCT+TGG | - | chr4_2:47402221-47402240 | None:intergenic | 35.0% | |
| GCAAGATTTCTTCAATGGAA+AGG | + | chr4_2:47402237-47402256 | Msa0603190:CDS | 35.0% | |
| GACTCGTGATAACAATTTGT+TGG | + | chr4_2:47402534-47402553 | Msa0603190:CDS | 35.0% | |
| GATTACAATCACCAATGACA+AGG | + | chr4_2:47402687-47402706 | Msa0603190:CDS | 35.0% | |
| CATCTTCTCAATTTCCTCTT+TGG | - | chr4_2:47402722-47402741 | None:intergenic | 35.0% | |
| CAAAGAGGAAATTGAGAAGA+TGG | + | chr4_2:47402720-47402739 | Msa0603190:CDS | 35.0% | |
| AATTGAAGATGCTATTGAGG+GGG | + | chr4_2:47402894-47402913 | Msa0603190:CDS | 35.0% | |
| TGAATTTGAGGACAAGATGA+AGG | + | chr4_2:47402957-47402976 | Msa0603190:CDS | 35.0% | |
| GATACATCCTAGCAATGATA+GGG | - | chr4_2:47403002-47403021 | None:intergenic | 35.0% | |
| TGATACATCCTAGCAATGAT+AGG | - | chr4_2:47403003-47403022 | None:intergenic | 35.0% | |
| ATCATTGCTAGGATGTATCA+AGG | + | chr4_2:47403003-47403022 | Msa0603190:CDS | 35.0% | |
| AACTTTGTTCATGGGATTGA+TGG | + | chr4_2:47403124-47403143 | Msa0603190:three_prime_UTR | 35.0% | |
| ACTTTGTTCATGGGATTGAT+GGG | + | chr4_2:47403125-47403144 | Msa0603190:three_prime_UTR | 35.0% | |
| TCTCGTCAGTGTAATTCTTT+CGG | + | chr4_2:47403230-47403249 | Msa0603190:three_prime_UTR | 35.0% | |
| CTGTGTTTATCAGTACGTAA+TGG | + | chr4_2:47403356-47403375 | Msa0603190:three_prime_UTR | 35.0% | |
| TGAGAGATTATGGCTGGAAA+AGG | + | chr4_2:47400519-47400538 | Msa0603190:exon | 40.0% | |
| ATTATGGCTGGAAAAGGTGA+AGG | + | chr4_2:47400525-47400544 | Msa0603190:exon | 40.0% | |
| TGAGATCATAGCAAACGATC+AGG | + | chr4_2:47400614-47400633 | Msa0603190:CDS | 40.0% | |
| GAGATCATAGCAAACGATCA+GGG | + | chr4_2:47400615-47400634 | Msa0603190:CDS | 40.0% | |
| ACTGATACGGAACGTTTGAT+CGG | + | chr4_2:47400669-47400688 | Msa0603190:CDS | 40.0% | |
| TAGTAGGGTTCATAGCAACT+TGG | - | chr4_2:47400710-47400729 | None:intergenic | 40.0% | |
| CAAGCAAACACAATCAGCTA+AGG | - | chr4_2:47401349-47401368 | None:intergenic | 40.0% | |
| TAGGAGAATCAGCGATGTTT+CGG | + | chr4_2:47401403-47401422 | Msa0603190:CDS | 40.0% | |
| CAATCATAGGTTTGTCAGCA+GGG | - | chr4_2:47401472-47401491 | None:intergenic | 40.0% | |
| ACAATCATAGGTTTGTCAGC+AGG | - | chr4_2:47401473-47401492 | None:intergenic | 40.0% | |
| TGCTGACAAACCTATGATTG+TGG | + | chr4_2:47401472-47401491 | Msa0603190:CDS | 40.0% | |
| TGTGGTGAACTATAAAGCTG+AGG | + | chr4_2:47401490-47401509 | Msa0603190:CDS | 40.0% | |
| TGCTGAAGAGATATCTTCCA+TGG | + | chr4_2:47401526-47401545 | Msa0603190:CDS | 40.0% | |
| TGTGAATCGTTGAAGTATGC+AGG | - | chr4_2:47401623-47401642 | None:intergenic | 40.0% | |
| TTCACAACGTCAAGCTACAA+AGG | + | chr4_2:47401637-47401656 | Msa0603190:CDS | 40.0% | |
| ATTGAGTCCAGAAATGACAC+CGG | - | chr4_2:47401666-47401685 | None:intergenic | 40.0% | |
| TTTCTGGACTCAATGTGTTG+AGG | + | chr4_2:47401672-47401691 | Msa0603190:CDS | 40.0% | |
| !! | CTTATTTTCGATCTTGGTGG+TGG | + | chr4_2:47401773-47401792 | Msa0603190:CDS | 40.0% |
| TACTGCTGGTGATACACATT+TGG | + | chr4_2:47401850-47401869 | Msa0603190:CDS | 40.0% | |
| ACTGCTGGTGATACACATTT+GGG | + | chr4_2:47401851-47401870 | Msa0603190:CDS | 40.0% | |
| AGGATATTAGCGGAAATCCA+AGG | + | chr4_2:47401939-47401958 | Msa0603190:CDS | 40.0% | |
| GGATATTAGCGGAAATCCAA+GGG | + | chr4_2:47401940-47401959 | Msa0603190:CDS | 40.0% | |
| TTCAAAACGAGCACGAGTAA+TGG | - | chr4_2:47402077-47402096 | None:intergenic | 40.0% | |
| GTGTTTAAGGGATGCTAAGA+TGG | + | chr4_2:47402144-47402163 | Msa0603190:CDS | 40.0% | |
| CATGATGTTGTTCTTGTTGG+TGG | + | chr4_2:47402181-47402200 | Msa0603190:CDS | 40.0% | |
| ! | TGAGGGTAATGAGAAAGTAC+AGG | + | chr4_2:47402333-47402352 | Msa0603190:CDS | 40.0% |
| GTAGGAATGGTTGTGTTTCT+GGG | - | chr4_2:47402433-47402452 | None:intergenic | 40.0% | |
| TCTACGAAGGAGAAAGAACA+AGG | + | chr4_2:47402512-47402531 | Msa0603190:CDS | 40.0% | |
| !! | GTTGGGCAAATTTGAGTTGT+CGG | + | chr4_2:47402552-47402571 | Msa0603190:CDS | 40.0% |
| !! | TTGGGCAAATTTGAGTTGTC+GGG | + | chr4_2:47402553-47402572 | Msa0603190:CDS | 40.0% |
| TCAAAGCAAACAGTGATCTG+AGG | - | chr4_2:47402604-47402623 | None:intergenic | 40.0% | |
| TGCTTTGACATTGATGCCAA+CGG | + | chr4_2:47402616-47402635 | Msa0603190:CDS | 40.0% | |
| TGAGACATTCAGAATACCGT+TGG | - | chr4_2:47402635-47402654 | None:intergenic | 40.0% | |
| TATTCTGAATGTCTCAGCAG+AGG | + | chr4_2:47402639-47402658 | Msa0603190:CDS | 40.0% | |
| !!! | AATCTTGTTTTTCTGCCCTG+TGG | - | chr4_2:47402671-47402690 | None:intergenic | 40.0% |
| ! | TGCTGAAAAGTACAAGTCTG+AGG | + | chr4_2:47402750-47402769 | Msa0603190:CDS | 40.0% |
| TGGTTGGATGGAAATCAACT+TGG | + | chr4_2:47402925-47402944 | Msa0603190:CDS | 40.0% | |
| TTTGCAACCCTATCATTGCT+AGG | + | chr4_2:47402992-47403011 | Msa0603190:CDS | 40.0% | |
| ! | GCAGGAGAACTCTTCAATTT+TGG | + | chr4_2:47403423-47403442 | Msa0603190:three_prime_UTR | 40.0% |
| ACCTGCGATTGGAATCGATT+TGG | + | chr4_2:47400548-47400567 | Msa0603190:CDS | 45.0% | |
| ! | CCTGCGATTGGAATCGATTT+GGG | + | chr4_2:47400549-47400568 | Msa0603190:CDS | 45.0% |
| CATGAAATTGTGGCCGTTCA+AGG | + | chr4_2:47401436-47401455 | Msa0603190:CDS | 45.0% | |
| GAAGATGAAGGAGATTGCAG+AGG | + | chr4_2:47401556-47401575 | Msa0603190:CDS | 45.0% | |
| GAGATTGCAGAGGCTTATCT+TGG | + | chr4_2:47401566-47401585 | Msa0603190:CDS | 45.0% | |
| AAGACCATAGGCAATAGCAG+CGG | - | chr4_2:47401717-47401736 | None:intergenic | 45.0% | |
| ! | TGCCTATGGTCTTGACAAGA+AGG | + | chr4_2:47401724-47401743 | Msa0603190:CDS | 45.0% |
| AGCCTTCTTGTCAAGACCAT+AGG | - | chr4_2:47401729-47401748 | None:intergenic | 45.0% | |
| GACAAGAAGGCTACAAGTAC+TGG | + | chr4_2:47401737-47401756 | Msa0603190:CDS | 45.0% | |
| ! | TTTGAGGTGAAAGCTACTGC+TGG | + | chr4_2:47401836-47401855 | Msa0603190:CDS | 45.0% |
| ! | CTCAATCTTCTAAGAGCCCT+TGG | - | chr4_2:47401959-47401978 | None:intergenic | 45.0% |
| AATGGTGGTTTGAGCAGTAG+AGG | - | chr4_2:47402014-47402033 | None:intergenic | 45.0% | |
| !! | AGCCTGTGGAGAAGTGTTTA+AGG | + | chr4_2:47402131-47402150 | Msa0603190:CDS | 45.0% |
| !! | GCCTGTGGAGAAGTGTTTAA+GGG | + | chr4_2:47402132-47402151 | Msa0603190:CDS | 45.0% |
| TCCCTTAAACACTTCTCCAC+AGG | - | chr4_2:47402136-47402155 | None:intergenic | 45.0% | |
| ! | TTCTTGTTGGTGGATCGACT+AGG | + | chr4_2:47402191-47402210 | Msa0603190:CDS | 45.0% |
| !! | TAAGAGCATCAACCCTGATG+AGG | + | chr4_2:47402267-47402286 | Msa0603190:CDS | 45.0% |
| CATAAGCAACAGCCTCATCA+GGG | - | chr4_2:47402282-47402301 | None:intergenic | 45.0% | |
| !!! | GTCCAAGCTGCTATTTTGAG+CGG | + | chr4_2:47402310-47402329 | Msa0603190:CDS | 45.0% |
| GGTAGGAATGGTTGTGTTTC+TGG | - | chr4_2:47402434-47402453 | None:intergenic | 45.0% | |
| CACAACCATTCCTACCAAGA+AGG | + | chr4_2:47402438-47402457 | Msa0603190:CDS | 45.0% | |
| TGAAAACACCTGCTCCTTCT+TGG | - | chr4_2:47402455-47402474 | None:intergenic | 45.0% | |
| ACCTACTCTGATAACCAACC+TGG | + | chr4_2:47402475-47402494 | Msa0603190:CDS | 45.0% | |
| !! | ACCAGGTTGGTTATCAGAGT+AGG | - | chr4_2:47402479-47402498 | None:intergenic | 45.0% |
| CAATCACCAATGACAAGGGT+AGG | + | chr4_2:47402692-47402711 | Msa0603190:CDS | 45.0% | |
| GGAAATTGAGAAGATGGTGC+AGG | + | chr4_2:47402726-47402745 | Msa0603190:CDS | 45.0% | |
| AAAGTACAAGTCTGAGGACG+AGG | + | chr4_2:47402756-47402775 | Msa0603190:CDS | 45.0% | |
| CTATTGAGGGGGCTATTCAA+TGG | + | chr4_2:47402905-47402924 | Msa0603190:CDS | 45.0% | |
| GGATGGAAATCAACTTGGAG+AGG | + | chr4_2:47402930-47402949 | Msa0603190:CDS | 45.0% | |
| TGGAGAGGCTGATGAATTTG+AGG | + | chr4_2:47402945-47402964 | Msa0603190:CDS | 45.0% | |
| TTGTTCATGGGATTGATGGG+TGG | + | chr4_2:47403128-47403147 | Msa0603190:three_prime_UTR | 45.0% | |
| ATGGGTGGTTCATGATTGCA+AGG | + | chr4_2:47403143-47403162 | Msa0603190:three_prime_UTR | 45.0% | |
| !! | ACGTAATGGGTACTGTTTGC+TGG | + | chr4_2:47403370-47403389 | Msa0603190:three_prime_UTR | 45.0% |
| CAGGCAAGAAATTTGCAAGC+AGG | + | chr4_2:47403405-47403424 | Msa0603190:three_prime_UTR | 45.0% | |
| AAAGGTGAAGGACCTGCGAT+TGG | + | chr4_2:47400537-47400556 | Msa0603190:CDS | 50.0% | |
| ! | CCCAAATCGATTCCAATCGC+AGG | - | chr4_2:47400552-47400571 | None:intergenic | 50.0% |
| CGTCAAGCTACAAAGGATGC+CGG | + | chr4_2:47401644-47401663 | Msa0603190:CDS | 50.0% | |
| !! | AAGGATGCCGGTGTCATTTC+TGG | + | chr4_2:47401656-47401675 | Msa0603190:CDS | 50.0% |
| GCTGGTGATACACATTTGGG+AGG | + | chr4_2:47401854-47401873 | Msa0603190:CDS | 50.0% | |
| CTGCTTGTGAGAGAGCTAAG+AGG | + | chr4_2:47401981-47402000 | Msa0603190:CDS | 50.0% | |
| ! | TAGGAAGTGTATGGAGCCTG+TGG | + | chr4_2:47402117-47402136 | Msa0603190:CDS | 50.0% |
| TGGATCGACTAGGATTCCCA+AGG | + | chr4_2:47402201-47402220 | Msa0603190:CDS | 50.0% | |
| CCATAAGCAACAGCCTCATC+AGG | - | chr4_2:47402283-47402302 | None:intergenic | 50.0% | |
| ! | CCTGATGAGGCTGTTGCTTA+TGG | + | chr4_2:47402280-47402299 | Msa0603190:CDS | 50.0% |
| CACCGCTCAAAATAGCAGCT+TGG | - | chr4_2:47402315-47402334 | None:intergenic | 50.0% | |
| !!! | AGCTGCTATTTTGAGCGGTG+AGG | + | chr4_2:47402315-47402334 | Msa0603190:CDS | 50.0% |
| !!! | GCTGCTATTTTGAGCGGTGA+GGG | + | chr4_2:47402316-47402335 | Msa0603190:CDS | 50.0% |
| GATGTTACTCCTCTCTCCCT+TGG | + | chr4_2:47402370-47402389 | Msa0603190:CDS | 50.0% | |
| TACTCCTCTCTCCCTTGGTT+TGG | + | chr4_2:47402375-47402394 | Msa0603190:CDS | 50.0% | |
| TCCTGCAGTCTCCAAACCAA+GGG | - | chr4_2:47402389-47402408 | None:intergenic | 50.0% | |
| CTGCTCCTTCTTGGTAGGAA+TGG | - | chr4_2:47402446-47402465 | None:intergenic | 50.0% | |
| CATTCCTACCAAGAAGGAGC+AGG | + | chr4_2:47402444-47402463 | Msa0603190:CDS | 50.0% | |
| AACACCTGCTCCTTCTTGGT+AGG | - | chr4_2:47402451-47402470 | None:intergenic | 50.0% | |
| TAGACCTGAATCAGCACACC+AGG | - | chr4_2:47402496-47402515 | None:intergenic | 50.0% | |
| !! | GTGCTGATTCAGGTCTACGA+AGG | + | chr4_2:47402499-47402518 | Msa0603190:CDS | 50.0% |
| GGAAAGCCTACCCTTGTCAT+TGG | - | chr4_2:47402701-47402720 | None:intergenic | 50.0% | |
| CAAGGGTAGGCTTTCCAAAG+AGG | + | chr4_2:47402705-47402724 | Msa0603190:CDS | 50.0% | |
| ! | GGACGAGGAGCACAAAAAGA+AGG | + | chr4_2:47402771-47402790 | Msa0603190:CDS | 50.0% |
| ! | CGAGGAGCACAAAAAGAAGG+TGG | + | chr4_2:47402774-47402793 | Msa0603190:CDS | 50.0% |
| GGAGCACAAAAAGAAGGTGG+AGG | + | chr4_2:47402777-47402796 | Msa0603190:CDS | 50.0% | |
| TGAGGGGGCTATTCAATGGT+TGG | + | chr4_2:47402909-47402928 | Msa0603190:CDS | 50.0% | |
| GGGGCTATTCAATGGTTGGA+TGG | + | chr4_2:47402913-47402932 | Msa0603190:CDS | 50.0% | |
| TGAGGACAAGATGAAGGAGC+TGG | + | chr4_2:47402963-47402982 | Msa0603190:CDS | 50.0% | |
| GACAAGATGAAGGAGCTGGA+GGG | + | chr4_2:47402967-47402986 | Msa0603190:CDS | 50.0% | |
| GCTAGGATGTATCAAGGTGC+TGG | + | chr4_2:47403009-47403028 | Msa0603190:CDS | 50.0% | |
| !! | AGGATGTATCAAGGTGCTGG+TGG | + | chr4_2:47403012-47403031 | Msa0603190:CDS | 50.0% |
| AGCAGGACCATCTTCATCCA+TGG | - | chr4_2:47403052-47403071 | None:intergenic | 50.0% | |
| TGGCCGTTCAAGGTCATTCC+TGG | + | chr4_2:47401446-47401465 | Msa0603190:CDS | 55.0% | |
| GGGCCAGGAATGACCTTGAA+CGG | - | chr4_2:47401452-47401471 | None:intergenic | 55.0% | |
| ATAGGTTTGTCAGCAGGGCC+AGG | - | chr4_2:47401467-47401486 | None:intergenic | 55.0% | |
| TAGGCAATAGCAGCGGCAGT+GGG | - | chr4_2:47401710-47401729 | None:intergenic | 55.0% | |
| ATAGGCAATAGCAGCGGCAG+TGG | - | chr4_2:47401711-47401730 | None:intergenic | 55.0% | |
| ACTGCCGCTGCTATTGCCTA+TGG | + | chr4_2:47401710-47401729 | Msa0603190:CDS | 55.0% | |
| GTCTCCAAACCAAGGGAGAG+AGG | - | chr4_2:47402382-47402401 | None:intergenic | 55.0% | |
| !! | TCCCTTGGTTTGGAGACTGC+AGG | + | chr4_2:47402385-47402404 | Msa0603190:CDS | 55.0% |
| CTCCTGCAGTCTCCAAACCA+AGG | - | chr4_2:47402390-47402409 | None:intergenic | 55.0% | |
| !! | CTTGGTTTGGAGACTGCAGG+AGG | + | chr4_2:47402388-47402407 | Msa0603190:CDS | 55.0% |
| CCTGAATCAGCACACCAGGT+TGG | - | chr4_2:47402492-47402511 | None:intergenic | 55.0% | |
| !! | CCAACCTGGTGTGCTGATTC+AGG | + | chr4_2:47402489-47402508 | Msa0603190:CDS | 55.0% |
| GTGATCTGAGGAACACCCCT+TGG | - | chr4_2:47402592-47402611 | None:intergenic | 55.0% | |
| TCAGCAGAGGACAAGACCAC+AGG | + | chr4_2:47402652-47402671 | Msa0603190:CDS | 55.0% | |
| CAGCAGAGGACAAGACCACA+GGG | + | chr4_2:47402653-47402672 | Msa0603190:CDS | 55.0% | |
| GGACAAGATGAAGGAGCTGG+AGG | + | chr4_2:47402966-47402985 | Msa0603190:CDS | 55.0% | |
| GGAGGAGCCATGGATGAAGA+TGG | + | chr4_2:47403042-47403061 | Msa0603190:CDS | 55.0% | |
| GATGAAGATGGTCCTGCTGC+TGG | + | chr4_2:47403054-47403073 | Msa0603190:CDS | 55.0% | |
| GGGTATCCCTCCTGCTCCAA+GGG | + | chr4_2:47402573-47402592 | Msa0603190:CDS | 60.0% | |
| GGTATCCCTCCTGCTCCAAG+GGG | + | chr4_2:47402574-47402593 | Msa0603190:CDS | 60.0% | |
| GAACACCCCTTGGAGCAGGA+GGG | - | chr4_2:47402582-47402601 | None:intergenic | 60.0% | |
| TGAGGAACACCCCTTGGAGC+AGG | - | chr4_2:47402586-47402605 | None:intergenic | 60.0% | |
| !! | CAAGGTGCTGGTGGTGATGC+TGG | + | chr4_2:47403021-47403040 | Msa0603190:CDS | 60.0% |
| ! | TGGTGATGCTGGAGGAGCCA+TGG | + | chr4_2:47403032-47403051 | Msa0603190:CDS | 60.0% |
| !! | CGGTGCTGGTCCCAAGATTG+AGG | + | chr4_2:47403086-47403105 | Msa0603190:CDS | 60.0% |
| CGGGTATCCCTCCTGCTCCA+AGG | + | chr4_2:47402572-47402591 | Msa0603190:CDS | 65.0% | |
| GGAACACCCCTTGGAGCAGG+AGG | - | chr4_2:47402583-47402602 | None:intergenic | 65.0% | |
| !! | GGTGCTGGTGGTGATGCTGG+AGG | + | chr4_2:47403024-47403043 | Msa0603190:CDS | 65.0% |
| GATGGTCCTGCTGCTGGCAG+TGG | + | chr4_2:47403060-47403079 | Msa0603190:CDS | 65.0% | |
| CCTGCTGCTGGCAGTGGAAG+CGG | + | chr4_2:47403066-47403085 | Msa0603190:CDS | 65.0% | |
| CCGCTTCCACTGCCAGCAGC+AGG | - | chr4_2:47403069-47403088 | None:intergenic | 70.0% | |
| GCTGGCAGTGGAAGCGGTGC+TGG | + | chr4_2:47403072-47403091 | Msa0603190:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 47400402 | 47403469 | 47400402 | ID=Msa0603190;Name=Msa0603190 |
| chr4_2 | mRNA | 47400402 | 47403469 | 47400402 | ID=Msa0603190-mRNA-1;Parent=Msa0603190;Name=Msa0603190-mRNA-1;_AED=0.26;_eAED=0.26;_QI=126|1|1|1|1|1|2|350|649 |
| chr4_2 | exon | 47400402 | 47400741 | 47400402 | ID=Msa0603190-mRNA-1:exon:10855;Parent=Msa0603190-mRNA-1 |
| chr4_2 | exon | 47401384 | 47403469 | 47401384 | ID=Msa0603190-mRNA-1:exon:10856;Parent=Msa0603190-mRNA-1 |
| chr4_2 | five_prime_UTR | 47400402 | 47400527 | 47400402 | ID=Msa0603190-mRNA-1:five_prime_utr;Parent=Msa0603190-mRNA-1 |
| chr4_2 | CDS | 47400528 | 47400741 | 47400528 | ID=Msa0603190-mRNA-1:cds;Parent=Msa0603190-mRNA-1 |
| chr4_2 | CDS | 47401384 | 47403119 | 47401384 | ID=Msa0603190-mRNA-1:cds;Parent=Msa0603190-mRNA-1 |
| chr4_2 | three_prime_UTR | 47403120 | 47403469 | 47403120 | ID=Msa0603190-mRNA-1:three_prime_utr;Parent=Msa0603190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
