Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0603200 | XP_013456102.1 | 99.692 | 649 | 2 | 0 | 1 | 649 | 1 | 649 | 0.0 | 1330 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0603200 | sp|P09189|HSP7C_PETHY | 92.956 | 653 | 40 | 2 | 1 | 649 | 1 | 651 | 0.0 | 1241 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0603200 | A0A072UM13 | 99.692 | 649 | 2 | 0 | 1 | 649 | 1 | 649 | 0.0 | 1330 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0603190 | Msa0603200 | 0.861926 | 7.278175e-64 | -8.615850e-47 |
Msa0603200 | Msa0644230 | 0.857135 | 2.006212e-62 | -8.615850e-47 |
Msa0603200 | Msa0644240 | 0.971408 | 4.076627e-133 | -8.615850e-47 |
Msa0603200 | Msa0887720 | 0.835821 | 1.342161e-56 | -8.615850e-47 |
Msa0548130 | Msa0603200 | 0.875988 | 1.996132e-68 | -8.615850e-47 |
Msa0548300 | Msa0603200 | 0.976958 | 7.838435e-143 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0603200 | MtrunA17_Chr4g0031321 | 99.692 | 649 | 2 | 0 | 1 | 649 | 1 | 649 | 0.0 | 1330 |
Msa0603200 | MtrunA17_Chr4g0031301 | 99.230 | 649 | 5 | 0 | 1 | 649 | 1 | 649 | 0.0 | 1322 |
Msa0603200 | MtrunA17_Chr7g0262821 | 92.450 | 649 | 49 | 0 | 1 | 649 | 1 | 649 | 0.0 | 1236 |
Msa0603200 | MtrunA17_Chr7g0223291 | 92.780 | 651 | 43 | 3 | 1 | 649 | 1 | 649 | 0.0 | 1236 |
Msa0603200 | MtrunA17_Chr7g0223181 | 92.473 | 651 | 44 | 2 | 1 | 649 | 1 | 648 | 0.0 | 1227 |
Msa0603200 | MtrunA17_Chr4g0073741 | 87.309 | 654 | 77 | 3 | 1 | 649 | 1 | 653 | 0.0 | 1154 |
Msa0603200 | MtrunA17_Chr6g0462681 | 67.154 | 615 | 201 | 1 | 1 | 615 | 1 | 614 | 0.0 | 850 |
Msa0603200 | MtrunA17_Chr7g0223751 | 66.667 | 621 | 202 | 4 | 1 | 619 | 1 | 618 | 0.0 | 842 |
Msa0603200 | MtrunA17_Chr2g0284681 | 67.881 | 604 | 174 | 3 | 9 | 606 | 8 | 597 | 0.0 | 835 |
Msa0603200 | MtrunA17_Chr6g0462601 | 66.071 | 616 | 208 | 1 | 1 | 616 | 1 | 615 | 0.0 | 834 |
Msa0603200 | MtrunA17_Chr7g0223711 | 65.378 | 621 | 211 | 3 | 1 | 619 | 1 | 619 | 0.0 | 834 |
Msa0603200 | MtrunA17_Chr2g0298851 | 65.913 | 619 | 204 | 6 | 1 | 615 | 1 | 616 | 0.0 | 818 |
Msa0603200 | MtrunA17_Chr7g0221661 | 65.528 | 615 | 208 | 3 | 1 | 613 | 1 | 613 | 0.0 | 818 |
Msa0603200 | MtrunA17_Chr7g0223741 | 66.667 | 597 | 195 | 3 | 1 | 595 | 1 | 595 | 0.0 | 818 |
Msa0603200 | MtrunA17_Chr8g0350731 | 64.800 | 625 | 215 | 4 | 1 | 623 | 29 | 650 | 0.0 | 811 |
Msa0603200 | MtrunA17_Chr5g0427901 | 64.013 | 628 | 211 | 4 | 1 | 615 | 1 | 626 | 0.0 | 810 |
Msa0603200 | MtrunA17_Chr2g0293581 | 65.416 | 613 | 208 | 3 | 6 | 615 | 7 | 618 | 0.0 | 810 |
Msa0603200 | MtrunA17_Chr8g0388761 | 65.961 | 614 | 203 | 4 | 7 | 618 | 36 | 645 | 0.0 | 808 |
Msa0603200 | MtrunA17_Chr8g0388671 | 65.961 | 614 | 203 | 4 | 7 | 618 | 36 | 645 | 0.0 | 806 |
Msa0603200 | MtrunA17_Chr7g0223731 | 65.296 | 608 | 206 | 4 | 1 | 606 | 1 | 605 | 0.0 | 804 |
Msa0603200 | MtrunA17_Chr7g0233311 | 63.592 | 618 | 221 | 3 | 1 | 615 | 1 | 617 | 0.0 | 801 |
Msa0603200 | MtrunA17_Chr7g0223801 | 63.371 | 617 | 220 | 5 | 1 | 615 | 1 | 613 | 0.0 | 798 |
Msa0603200 | MtrunA17_Chr7g0223621 | 64.590 | 610 | 211 | 4 | 1 | 608 | 1 | 607 | 0.0 | 798 |
Msa0603200 | MtrunA17_Chr7g0223031 | 64.484 | 611 | 212 | 4 | 1 | 609 | 1 | 608 | 0.0 | 796 |
Msa0603200 | MtrunA17_Chr7g0223631 | 64.090 | 621 | 204 | 6 | 1 | 619 | 1 | 604 | 0.0 | 786 |
Msa0603200 | MtrunA17_Chr7g0248131 | 63.738 | 626 | 217 | 8 | 1 | 619 | 1 | 623 | 0.0 | 785 |
Msa0603200 | MtrunA17_Chr6g0462711 | 62.780 | 626 | 226 | 3 | 2 | 621 | 3 | 627 | 0.0 | 784 |
Msa0603200 | MtrunA17_Chr7g0223781 | 63.415 | 615 | 219 | 3 | 1 | 613 | 1 | 611 | 0.0 | 783 |
Msa0603200 | MtrunA17_Chr2g0287631 | 65.049 | 618 | 212 | 3 | 1 | 615 | 1 | 617 | 0.0 | 782 |
Msa0603200 | MtrunA17_Chr4g0040931 | 63.175 | 611 | 220 | 4 | 1 | 608 | 1 | 609 | 0.0 | 781 |
Msa0603200 | MtrunA17_Chr7g0248151 | 63.840 | 625 | 218 | 6 | 1 | 620 | 1 | 622 | 0.0 | 781 |
Msa0603200 | MtrunA17_Chr7g0223701 | 63.328 | 619 | 213 | 6 | 1 | 608 | 1 | 616 | 0.0 | 780 |
Msa0603200 | MtrunA17_Chr6g0462771 | 62.141 | 626 | 231 | 2 | 1 | 621 | 1 | 625 | 0.0 | 780 |
Msa0603200 | MtrunA17_Chr2g0298861 | 61.905 | 630 | 223 | 6 | 1 | 615 | 1 | 628 | 0.0 | 780 |
Msa0603200 | MtrunA17_Chr7g0223721 | 62.298 | 618 | 228 | 4 | 1 | 615 | 1 | 616 | 0.0 | 778 |
Msa0603200 | MtrunA17_Chr7g0225671 | 63.518 | 614 | 216 | 7 | 6 | 615 | 13 | 622 | 0.0 | 777 |
Msa0603200 | MtrunA17_Chr6g0462641 | 61.182 | 626 | 237 | 2 | 1 | 621 | 1 | 625 | 0.0 | 771 |
Msa0603200 | MtrunA17_Chr7g0223851 | 63.005 | 619 | 222 | 6 | 1 | 615 | 10 | 625 | 0.0 | 768 |
Msa0603200 | MtrunA17_Chr2g0296391 | 68.809 | 529 | 162 | 2 | 1 | 527 | 1 | 528 | 0.0 | 752 |
Msa0603200 | MtrunA17_Chr7g0233301 | 60.709 | 621 | 207 | 6 | 1 | 617 | 1 | 588 | 0.0 | 747 |
Msa0603200 | MtrunA17_Chr7g0223821 | 62.319 | 621 | 222 | 7 | 1 | 613 | 1 | 617 | 0.0 | 738 |
Msa0603200 | MtrunA17_Chr7g0217971 | 61.462 | 602 | 203 | 5 | 1 | 600 | 1 | 575 | 0.0 | 734 |
Msa0603200 | MtrunA17_Chr8g0390821 | 56.781 | 671 | 218 | 10 | 1 | 616 | 1 | 654 | 0.0 | 721 |
Msa0603200 | MtrunA17_Chr6g0462611 | 64.195 | 553 | 195 | 2 | 63 | 615 | 13 | 562 | 0.0 | 720 |
Msa0603200 | MtrunA17_Chr4g0012541 | 59.128 | 619 | 237 | 7 | 1 | 615 | 1 | 607 | 0.0 | 716 |
Msa0603200 | MtrunA17_Chr7g0223831 | 59.738 | 611 | 209 | 8 | 1 | 606 | 1 | 579 | 0.0 | 704 |
Msa0603200 | MtrunA17_Chr7g0223541 | 61.676 | 561 | 213 | 2 | 61 | 621 | 20 | 578 | 0.0 | 699 |
Msa0603200 | MtrunA17_Chr7g0215261 | 57.997 | 619 | 218 | 7 | 1 | 614 | 1 | 582 | 0.0 | 693 |
Msa0603200 | MtrunA17_Chr7g0228281 | 56.472 | 618 | 219 | 7 | 1 | 615 | 62 | 632 | 0.0 | 674 |
Msa0603200 | MtrunA17_Chr7g0223681 | 62.335 | 531 | 197 | 3 | 89 | 619 | 2 | 529 | 0.0 | 671 |
Msa0603200 | MtrunA17_Chr2g0299921 | 84.576 | 389 | 58 | 1 | 4 | 392 | 1024 | 1410 | 0.0 | 669 |
Msa0603200 | MtrunA17_Chr2g0299921 | 83.636 | 385 | 60 | 2 | 4 | 387 | 1408 | 1790 | 0.0 | 635 |
Msa0603200 | MtrunA17_Chr2g0299851 | 83.204 | 387 | 63 | 1 | 1 | 387 | 1030 | 1414 | 0.0 | 663 |
Msa0603200 | MtrunA17_Chr2g0293601 | 64.355 | 519 | 148 | 3 | 1 | 517 | 1 | 484 | 0.0 | 657 |
Msa0603200 | MtrunA17_Chr2g0299791 | 81.443 | 388 | 70 | 1 | 1 | 388 | 1034 | 1419 | 0.0 | 647 |
Msa0603200 | MtrunA17_Chr2g0299821 | 71.778 | 450 | 113 | 3 | 1 | 436 | 1 | 450 | 0.0 | 634 |
Msa0603200 | MtrunA17_Chr2g0299821 | 80.000 | 95 | 12 | 1 | 452 | 539 | 390 | 484 | 7.70e-40 | 152 |
Msa0603200 | MtrunA17_Chr2g0331381 | 58.780 | 541 | 157 | 6 | 9 | 547 | 6 | 482 | 0.0 | 632 |
Msa0603200 | MtrunA17_Chr2g0299881 | 77.057 | 401 | 86 | 3 | 6 | 402 | 1035 | 1433 | 0.0 | 625 |
Msa0603200 | MtrunA17_Chr2g0299881 | 75.758 | 66 | 12 | 1 | 183 | 248 | 1414 | 1475 | 4.80e-22 | 101 |
Msa0603200 | MtrunA17_Chr2g0293561 | 73.797 | 374 | 96 | 1 | 1 | 372 | 1 | 374 | 0.0 | 585 |
Msa0603200 | MtrunA17_Chr1g0166551 | 51.140 | 614 | 182 | 8 | 6 | 615 | 2 | 501 | 0.0 | 582 |
Msa0603200 | MtrunA17_Chr2g0279901 | 51.333 | 600 | 262 | 10 | 10 | 602 | 57 | 633 | 0.0 | 576 |
Msa0603200 | MtrunA17_Chr6g0462861 | 50.318 | 628 | 276 | 11 | 1 | 615 | 1 | 605 | 0.0 | 567 |
Msa0603200 | MtrunA17_Chr4g0049501 | 51.000 | 600 | 265 | 10 | 10 | 602 | 54 | 631 | 0.0 | 566 |
Msa0603200 | MtrunA17_Chr2g0277021 | 47.975 | 642 | 305 | 13 | 10 | 641 | 72 | 694 | 0.0 | 536 |
Msa0603200 | MtrunA17_Chr2g0293271 | 54.920 | 437 | 124 | 4 | 21 | 455 | 43 | 408 | 3.85e-162 | 471 |
Msa0603200 | MtrunA17_Chr1g0151991 | 70.790 | 291 | 83 | 1 | 1 | 289 | 1 | 291 | 3.95e-149 | 433 |
Msa0603200 | MtrunA17_Chr7g0245521 | 72.161 | 273 | 74 | 1 | 1 | 271 | 1 | 273 | 5.23e-142 | 414 |
Msa0603200 | MtrunA17_Chr6g0462631 | 59.036 | 332 | 92 | 3 | 86 | 415 | 8 | 297 | 2.99e-123 | 367 |
Msa0603200 | MtrunA17_Chr7g0223761 | 49.206 | 378 | 148 | 2 | 239 | 615 | 3 | 337 | 4.10e-119 | 358 |
Msa0603200 | MtrunA17_Chr6g0462751 | 54.441 | 349 | 100 | 3 | 65 | 411 | 12 | 303 | 4.61e-118 | 354 |
Msa0603200 | MtrunA17_Chr7g0245531 | 58.599 | 314 | 128 | 2 | 303 | 616 | 2 | 313 | 8.89e-118 | 353 |
Msa0603200 | MtrunA17_Chr1g0152001 | 55.556 | 297 | 127 | 5 | 313 | 608 | 1 | 293 | 9.52e-103 | 315 |
Msa0603200 | MtrunA17_Chr1g0188601 | 73.822 | 191 | 50 | 0 | 90 | 280 | 1 | 191 | 1.06e-98 | 300 |
Msa0603200 | MtrunA17_Chr5g0394391 | 36.382 | 503 | 293 | 10 | 9 | 494 | 29 | 521 | 6.48e-97 | 308 |
Msa0603200 | MtrunA17_Chr7g0223671 | 69.841 | 189 | 57 | 0 | 72 | 260 | 8 | 196 | 4.09e-93 | 286 |
Msa0603200 | MtrunA17_Chr1g0188611 | 53.872 | 297 | 127 | 4 | 320 | 615 | 1 | 288 | 1.19e-85 | 270 |
Msa0603200 | MtrunA17_Chr6g0462791 | 70.455 | 176 | 51 | 1 | 106 | 281 | 1 | 175 | 1.89e-82 | 257 |
Msa0603200 | MtrunA17_Chr2g0331901 | 32.972 | 461 | 291 | 5 | 10 | 457 | 4 | 459 | 7.00e-81 | 273 |
Msa0603200 | MtrunA17_Chr4g0004331 | 34.018 | 438 | 273 | 4 | 10 | 434 | 4 | 438 | 5.62e-80 | 271 |
Msa0603200 | MtrunA17_Chr5g0444001 | 34.192 | 427 | 272 | 4 | 10 | 430 | 4 | 427 | 2.39e-77 | 256 |
Msa0603200 | MtrunA17_Chr3g0098761 | 33.571 | 420 | 274 | 4 | 10 | 428 | 4 | 419 | 3.22e-75 | 256 |
Msa0603200 | MtrunA17_Chr7g0223771 | 73.203 | 153 | 41 | 0 | 92 | 244 | 2 | 154 | 6.40e-75 | 237 |
Msa0603200 | MtrunA17_Chr5g0394221 | 42.945 | 326 | 174 | 5 | 265 | 587 | 35 | 351 | 1.32e-71 | 235 |
Msa0603200 | MtrunA17_Chr4g0046881 | 73.050 | 141 | 35 | 1 | 133 | 273 | 14 | 151 | 9.05e-69 | 221 |
Msa0603200 | MtrunA17_Chr4g0060241 | 32.143 | 504 | 307 | 14 | 10 | 496 | 21 | 506 | 3.26e-67 | 229 |
Msa0603200 | MtrunA17_Chr4g0064621 | 33.789 | 512 | 307 | 11 | 9 | 496 | 140 | 643 | 5.20e-67 | 232 |
Msa0603200 | MtrunA17_Chr6g0462701 | 62.651 | 166 | 38 | 1 | 103 | 268 | 27 | 168 | 1.36e-61 | 202 |
Msa0603200 | MtrunA17_Chr5g0442171 | 37.168 | 339 | 182 | 9 | 168 | 491 | 1 | 323 | 6.59e-60 | 203 |
Msa0603200 | MtrunA17_Chr6g0462691 | 67.586 | 145 | 47 | 0 | 320 | 464 | 1 | 145 | 2.75e-58 | 193 |
Msa0603200 | MtrunA17_Chr7g0223861 | 70.992 | 131 | 38 | 0 | 76 | 206 | 4 | 134 | 4.47e-58 | 192 |
Msa0603200 | MtrunA17_Chr3g0120101 | 27.567 | 526 | 336 | 12 | 10 | 498 | 27 | 544 | 1.83e-57 | 208 |
Msa0603200 | MtrunA17_Chr7g0245541 | 48.756 | 201 | 102 | 1 | 416 | 616 | 1 | 200 | 4.83e-54 | 183 |
Msa0603200 | MtrunA17_Chr5g0394231 | 39.207 | 227 | 87 | 4 | 72 | 297 | 5 | 181 | 1.12e-43 | 154 |
Msa0603200 | MtrunA17_Chr4g0046871 | 72.449 | 98 | 26 | 1 | 337 | 434 | 9 | 105 | 1.63e-40 | 143 |
Msa0603200 | MtrunA17_Chr6g0481391 | 59.836 | 122 | 46 | 1 | 36 | 157 | 13 | 131 | 1.16e-39 | 142 |
Msa0603200 | MtrunA17_Chr6g0462621 | 76.056 | 71 | 17 | 0 | 1 | 71 | 1 | 71 | 3.88e-32 | 119 |
Msa0603200 | MtrunA17_Chr7g0223691 | 78.082 | 73 | 14 | 1 | 1 | 71 | 1 | 73 | 9.15e-32 | 117 |
Msa0603200 | MtrunA17_Chr6g0481381 | 71.622 | 74 | 21 | 0 | 174 | 247 | 1 | 74 | 1.32e-30 | 118 |
Msa0603200 | MtrunA17_Chr6g0481381 | 38.384 | 99 | 60 | 1 | 515 | 612 | 75 | 173 | 1.77e-11 | 63.5 |
Msa0603200 | MtrunA17_Chr1g0188591 | 75.342 | 73 | 16 | 1 | 1 | 71 | 1 | 73 | 2.58e-30 | 114 |
Msa0603200 | MtrunA17_Chr2g0284661 | 71.084 | 83 | 24 | 0 | 366 | 448 | 61 | 143 | 3.16e-30 | 115 |
Msa0603200 | MtrunA17_Chr2g0284661 | 50.820 | 61 | 28 | 1 | 223 | 281 | 5 | 65 | 1.65e-11 | 62.4 |
Msa0603200 | MtrunA17_Chr7g0223881 | 60.000 | 75 | 29 | 1 | 286 | 360 | 9 | 82 | 1.06e-24 | 98.2 |
Msa0603200 | MtrunA17_Chr7g0223791 | 64.634 | 82 | 21 | 3 | 54 | 135 | 18 | 91 | 2.96e-24 | 100 |
Msa0603200 | MtrunA17_Chr7g0223791 | 45.652 | 92 | 50 | 0 | 482 | 573 | 90 | 181 | 2.40e-18 | 83.2 |
Msa0603200 | MtrunA17_Chr2g0299941 | 76.667 | 60 | 14 | 0 | 398 | 457 | 23 | 82 | 1.54e-23 | 95.1 |
Msa0603200 | MtrunA17_Chr7g0221651 | 53.571 | 84 | 39 | 0 | 213 | 296 | 1 | 84 | 3.42e-23 | 94.0 |
Msa0603200 | MtrunA17_Chr4g0064651 | 46.739 | 92 | 49 | 0 | 396 | 487 | 29 | 120 | 1.93e-22 | 93.2 |
Msa0603200 | MtrunA17_Chr2g0299891 | 90.698 | 43 | 4 | 0 | 313 | 355 | 1 | 43 | 2.77e-20 | 85.1 |
Msa0603200 | MtrunA17_Chr7g0223871 | 39.683 | 126 | 75 | 1 | 491 | 615 | 7 | 132 | 2.84e-19 | 84.7 |
Msa0603200 | MtrunA17_Chr6g0462801 | 63.077 | 65 | 19 | 1 | 320 | 379 | 1 | 65 | 3.24e-17 | 76.6 |
Msa0603200 | MtrunA17_Chr5g0442161 | 31.126 | 151 | 99 | 3 | 9 | 155 | 28 | 177 | 2.57e-15 | 74.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0603200 | AT3G12580.1 | 92.473 | 651 | 46 | 2 | 1 | 649 | 1 | 650 | 0.0 | 1220 |
Msa0603200 | AT5G02500.1 | 90.812 | 653 | 54 | 2 | 1 | 649 | 1 | 651 | 0.0 | 1211 |
Msa0603200 | AT3G09440.1 | 91.244 | 651 | 53 | 2 | 1 | 649 | 1 | 649 | 0.0 | 1208 |
Msa0603200 | AT3G09440.4 | 91.244 | 651 | 53 | 2 | 1 | 649 | 1 | 649 | 0.0 | 1208 |
Msa0603200 | AT3G09440.2 | 91.244 | 651 | 53 | 2 | 1 | 649 | 1 | 649 | 0.0 | 1208 |
Msa0603200 | AT3G09440.3 | 91.244 | 651 | 53 | 2 | 1 | 649 | 1 | 649 | 0.0 | 1208 |
Msa0603200 | AT5G02490.1 | 89.144 | 654 | 65 | 2 | 1 | 649 | 1 | 653 | 0.0 | 1192 |
Msa0603200 | AT1G16030.1 | 84.284 | 649 | 99 | 2 | 1 | 649 | 1 | 646 | 0.0 | 1130 |
Msa0603200 | AT1G56410.1 | 87.237 | 619 | 77 | 1 | 1 | 619 | 1 | 617 | 0.0 | 1118 |
Msa0603200 | AT5G42020.1 | 65.217 | 621 | 210 | 4 | 7 | 625 | 35 | 651 | 0.0 | 832 |
Msa0603200 | AT5G42020.3 | 65.217 | 621 | 210 | 4 | 7 | 625 | 40 | 656 | 0.0 | 830 |
Msa0603200 | AT5G28540.1 | 65.798 | 614 | 204 | 4 | 7 | 618 | 35 | 644 | 0.0 | 829 |
Msa0603200 | AT1G09080.2 | 63.132 | 613 | 221 | 3 | 7 | 618 | 40 | 648 | 0.0 | 785 |
Msa0603200 | AT1G09080.1 | 63.132 | 613 | 221 | 3 | 7 | 618 | 50 | 658 | 0.0 | 785 |
Msa0603200 | AT5G02500.2 | 92.893 | 394 | 28 | 0 | 1 | 394 | 1 | 394 | 0.0 | 769 |
Msa0603200 | AT5G02500.2 | 76.812 | 138 | 26 | 2 | 516 | 649 | 386 | 521 | 1.53e-54 | 195 |
Msa0603200 | AT5G42020.2 | 62.545 | 558 | 184 | 8 | 7 | 550 | 35 | 581 | 0.0 | 674 |
Msa0603200 | AT5G42020.2 | 51.724 | 87 | 41 | 1 | 540 | 625 | 510 | 596 | 1.40e-21 | 99.8 |
Msa0603200 | AT5G09590.1 | 52.196 | 592 | 257 | 9 | 10 | 594 | 60 | 632 | 0.0 | 563 |
Msa0603200 | AT4G24280.1 | 49.418 | 601 | 280 | 10 | 10 | 605 | 81 | 662 | 0.0 | 541 |
Msa0603200 | AT5G49910.1 | 48.475 | 623 | 294 | 11 | 10 | 624 | 81 | 684 | 0.0 | 538 |
Msa0603200 | AT4G37910.1 | 52.422 | 578 | 249 | 9 | 10 | 580 | 55 | 613 | 0.0 | 535 |
Msa0603200 | AT4G37910.2 | 52.422 | 578 | 249 | 9 | 10 | 580 | 55 | 613 | 0.0 | 535 |
Msa0603200 | AT2G32120.1 | 34.180 | 512 | 309 | 9 | 9 | 508 | 30 | 525 | 1.80e-88 | 286 |
Msa0603200 | AT2G32120.2 | 34.180 | 512 | 309 | 9 | 9 | 508 | 30 | 525 | 1.80e-88 | 286 |
Msa0603200 | AT1G79930.2 | 34.932 | 438 | 269 | 4 | 10 | 434 | 4 | 438 | 1.26e-84 | 282 |
Msa0603200 | AT1G79930.1 | 34.932 | 438 | 269 | 4 | 10 | 434 | 4 | 438 | 1.64e-84 | 283 |
Msa0603200 | AT1G79920.1 | 34.932 | 438 | 269 | 4 | 10 | 434 | 4 | 438 | 2.42e-83 | 278 |
Msa0603200 | AT1G79920.3 | 34.932 | 438 | 269 | 4 | 10 | 434 | 4 | 438 | 3.44e-83 | 277 |
Msa0603200 | AT1G79920.2 | 34.932 | 438 | 269 | 4 | 10 | 434 | 4 | 438 | 3.44e-83 | 277 |
Msa0603200 | AT1G79920.4 | 34.932 | 438 | 269 | 4 | 10 | 434 | 4 | 438 | 3.44e-83 | 277 |
Msa0603200 | AT1G11660.4 | 27.219 | 676 | 403 | 12 | 10 | 619 | 4 | 656 | 1.96e-82 | 276 |
Msa0603200 | AT1G11660.3 | 27.219 | 676 | 403 | 12 | 10 | 619 | 4 | 656 | 1.96e-82 | 276 |
Msa0603200 | AT1G11660.1 | 27.219 | 676 | 403 | 12 | 10 | 619 | 4 | 656 | 1.96e-82 | 276 |
Msa0603200 | AT1G11660.2 | 27.301 | 641 | 377 | 12 | 45 | 619 | 2 | 619 | 2.55e-74 | 253 |
Msa0603200 | AT4G16660.2 | 25.348 | 718 | 424 | 16 | 5 | 615 | 46 | 758 | 2.02e-62 | 223 |
Msa0603200 | AT4G16660.1 | 25.627 | 718 | 422 | 17 | 5 | 615 | 22 | 734 | 3.89e-61 | 219 |
Find 184 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCATAATCTCACTAAATTT+TGG | 0.083756 | 4_2:-47412004 | None:intergenic |
AACTTTGGTATTGGGATTTA+TGG | 0.126728 | 4_2:+47414773 | Msa0603200:three_prime_UTR |
CCCAAAATTTAGTGAGATTA+TGG | 0.173453 | 4_2:+47412003 | Msa0603200:exon |
TGAATAGAATTCTTCAATTT+TGG | 0.175378 | 4_2:+47415079 | Msa0603200:three_prime_UTR |
CATCTTCTCAATTTCCTCTT+TGG | 0.183600 | 4_2:-47414368 | None:intergenic |
AAGGATGCCGGTGTCATTTC+TGG | 0.230319 | 4_2:+47413305 | Msa0603200:CDS |
TCTTGAATTCTTGAACAAAA+TGG | 0.242578 | 4_2:-47413553 | None:intergenic |
AGCCTGTTGAGAAGTGTTTA+AGG | 0.251003 | 4_2:+47413780 | Msa0603200:CDS |
TGATACATCCTTGCAATGAT+AGG | 0.282685 | 4_2:-47414649 | None:intergenic |
TACTCCTCTTTCCCTTGGTT+TGG | 0.290944 | 4_2:+47414024 | Msa0603200:CDS |
GATTGTGTTCCTCATGTTGT+AGG | 0.297657 | 4_2:-47414473 | None:intergenic |
TCAGATGCCAAGCGTTTAAT+TGG | 0.329823 | 4_2:+47413029 | Msa0603200:intron |
TGGCCATTCAAGGTCATTCC+TGG | 0.331072 | 4_2:+47413095 | Msa0603200:CDS |
ACTGCTGCTGCTATTGCTTA+TGG | 0.331381 | 4_2:+47413359 | Msa0603200:CDS |
TTAAGCTGAACTTTGGTATT+GGG | 0.332975 | 4_2:+47414765 | Msa0603200:exon |
CTAGTTATATGTATGTGTTT+TGG | 0.337528 | 4_2:+47414836 | Msa0603200:three_prime_UTR |
CGAAAACACCTGCTCCTTCT+TGG | 0.338820 | 4_2:-47414101 | None:intergenic |
GCCTGCGATTGGAATCGATT+TGG | 0.340588 | 4_2:+47412042 | Msa0603200:CDS |
GCTGGCAGTGGAAGTGGTGC+TGG | 0.342439 | 4_2:+47414721 | Msa0603200:CDS |
CCTGCGATTGGAATCGATTT+GGG | 0.353641 | 4_2:+47412043 | Msa0603200:CDS |
TACTGCTGGTGATACACATT+TGG | 0.354173 | 4_2:+47413499 | Msa0603200:CDS |
CCTGATGAAGCCGTTGCATA+TGG | 0.359843 | 4_2:+47413929 | Msa0603200:CDS |
TGCAAAAGTTGTTGAACCTT+CGG | 0.362052 | 4_2:-47413866 | None:intergenic |
AATGATTGTGGTGAACTATA+AGG | 0.363219 | 4_2:+47413133 | Msa0603200:CDS |
ATTAAGCTGAACTTTGGTAT+TGG | 0.364848 | 4_2:+47414764 | Msa0603200:exon |
CCTGCTGCTGGCAGTGGAAG+TGG | 0.369861 | 4_2:+47414715 | Msa0603200:CDS |
GTAGGAATGGTTGTGTTTCT+CGG | 0.374272 | 4_2:-47414079 | None:intergenic |
GTTGATGATGTTGTTCTAGT+TGG | 0.375499 | 4_2:+47413827 | Msa0603200:CDS |
CCAACCTGGTGTGTTGATTC+AGG | 0.377108 | 4_2:+47414138 | Msa0603200:CDS |
CATATTCATGTGTTGGTGTT+TGG | 0.389658 | 4_2:+47412071 | Msa0603200:CDS |
GGATTTGTTTAGAAAGTGTA+TGG | 0.395555 | 4_2:+47413757 | Msa0603200:CDS |
TAGGCGAATCAGCGATGTTT+CGG | 0.397395 | 4_2:+47413052 | Msa0603200:CDS |
TTATAGTTCACCACAATCAT+TGG | 0.398480 | 4_2:-47413131 | None:intergenic |
TTACCGAAAACAGTGTTAGT+AGG | 0.404952 | 4_2:-47412217 | None:intergenic |
GATGTTACTCCTCTTTCCCT+TGG | 0.405687 | 4_2:+47414019 | Msa0603200:CDS |
ACTTTGGTATTGGGATTTAT+GGG | 0.406815 | 4_2:+47414774 | Msa0603200:three_prime_UTR |
GATGGTCCTGCTGCTGGCAG+TGG | 0.411505 | 4_2:+47414709 | Msa0603200:CDS |
ACAATCATTGGTTTGTCAGC+AGG | 0.411900 | 4_2:-47413119 | None:intergenic |
CAAGGTGCTGGTGGTGATGC+TGG | 0.412390 | 4_2:+47414670 | Msa0603200:CDS |
CATGAAATTGTGGCCATTCA+AGG | 0.415218 | 4_2:+47413085 | Msa0603200:CDS |
TCCCTTGGTTTGGAGACTGC+AGG | 0.421609 | 4_2:+47414034 | Msa0603200:CDS |
GAGATTGCAGAGGCTTATCT+TGG | 0.422742 | 4_2:+47413215 | Msa0603200:CDS |
GTTGGGCAAGTTTGAGTTGT+CGG | 0.423204 | 4_2:+47414201 | Msa0603200:CDS |
TGAAATTGATTCATTGTTTG+AGG | 0.423673 | 4_2:+47413682 | Msa0603200:CDS |
TCAAACAAGTTTCAATGCAT+TGG | 0.424885 | 4_2:+47414977 | Msa0603200:three_prime_UTR |
GGAAAGCCTACCCTTGTCAT+TGG | 0.428458 | 4_2:-47414347 | None:intergenic |
TGAAATCATAGCAAATGATC+AGG | 0.428560 | 4_2:+47412108 | Msa0603200:CDS |
CGTGTTTATCTTTCTCAGTT+GGG | 0.431429 | 4_2:+47415016 | Msa0603200:three_prime_UTR |
GTACATTGAAGTAACCTAGA+TGG | 0.433153 | 4_2:-47414879 | None:intergenic |
TCCCTTAAACACTTCTCAAC+AGG | 0.433425 | 4_2:-47413782 | None:intergenic |
CAAAGAGGAAATTGAGAAGA+TGG | 0.433532 | 4_2:+47414369 | Msa0603200:CDS |
TTGGGCAAGTTTGAGTTGTC+GGG | 0.437869 | 4_2:+47414202 | Msa0603200:CDS |
GATGAGGATGGTCCTGCTGC+TGG | 0.439660 | 4_2:+47414703 | Msa0603200:CDS |
CATGTTGAGCTCTTCAAAAC+GGG | 0.446462 | 4_2:-47413735 | None:intergenic |
CCATATGCAACGGCTTCATC+AGG | 0.446831 | 4_2:-47413929 | None:intergenic |
TTGTTATGATAAATTGATCA+TGG | 0.452054 | 4_2:+47414951 | Msa0603200:three_prime_UTR |
CTGCTCCTTCTTGGTAGGAA+TGG | 0.452909 | 4_2:-47414092 | None:intergenic |
CTGATGAAGCCGTTGCATAT+GGG | 0.454888 | 4_2:+47413930 | Msa0603200:CDS |
GGGCATACCTCCTGCTCCAA+GGG | 0.460951 | 4_2:+47414222 | Msa0603200:CDS |
ACTGCTGGTGATACACATTT+GGG | 0.462462 | 4_2:+47413500 | Msa0603200:CDS |
TTATGTTGCTTTCACTGATA+CGG | 0.463481 | 4_2:+47412150 | Msa0603200:CDS |
CATGGTTCTTATGAAGATGA+AGG | 0.464118 | 4_2:+47413193 | Msa0603200:CDS |
AGAAATGACACCGGCATCCT+TGG | 0.464569 | 4_2:-47413303 | None:intergenic |
AGTGAGATTATGGCTGGAAA+AGG | 0.464749 | 4_2:+47412013 | Msa0603200:exon |
CCATGTTGAGCTCTTCAAAA+CGG | 0.468199 | 4_2:-47413736 | None:intergenic |
AGTACAGGATCTGTTGTTGC+TGG | 0.469670 | 4_2:+47413997 | Msa0603200:CDS |
TCGTGTTTATCTTTCTCAGT+TGG | 0.473963 | 4_2:+47415015 | Msa0603200:three_prime_UTR |
TCGCCTACCAATTAAACGCT+TGG | 0.477726 | 4_2:-47413036 | None:intergenic |
CGGGCATACCTCCTGCTCCA+AGG | 0.477998 | 4_2:+47414221 | Msa0603200:CDS |
GATGATGTTGTTCTAGTTGG+TGG | 0.478696 | 4_2:+47413830 | Msa0603200:CDS |
GTGTTTAAGGGATGCTAAGA+TGG | 0.480423 | 4_2:+47413793 | Msa0603200:CDS |
GAAAATTGAAGATGCTATTG+AGG | 0.480599 | 4_2:+47414540 | Msa0603200:CDS |
ATTGGTTTGTCAGCAGGGCC+AGG | 0.481800 | 4_2:-47413113 | None:intergenic |
CAATGAATCAATTTCAATGG+TGG | 0.482628 | 4_2:-47413675 | None:intergenic |
CTCAATCTTCTCAGAGCCCT+CGG | 0.484863 | 4_2:-47413605 | None:intergenic |
AAATTTAGTGAGATTATGGC+TGG | 0.487985 | 4_2:+47412007 | Msa0603200:exon |
TTCTAGTTGGTGGATCTACT+AGG | 0.492016 | 4_2:+47413840 | Msa0603200:CDS |
AAAGGTGAAGGGCCTGCGAT+TGG | 0.492641 | 4_2:+47412031 | Msa0603200:CDS |
GCCTGTTGAGAAGTGTTTAA+GGG | 0.493521 | 4_2:+47413781 | Msa0603200:CDS |
GCAAGATTTCTTCAATGGAA+AGG | 0.494283 | 4_2:+47413886 | Msa0603200:CDS |
GGGCCAGGAATGACCTTGAA+TGG | 0.494864 | 4_2:-47413098 | None:intergenic |
TGTTTCACTTCTTACTATTG+AGG | 0.495641 | 4_2:+47413454 | Msa0603200:CDS |
AAACAATGAATCAATTTCAA+TGG | 0.497295 | 4_2:-47413678 | None:intergenic |
ATTCAAGAGGAAGAATAAGA+AGG | 0.502948 | 4_2:+47413568 | Msa0603200:CDS |
AAGTTGATTAAGCTGAACTT+TGG | 0.503510 | 4_2:+47414758 | Msa0603200:exon |
GACTCGTGATAACAATCTGT+TGG | 0.504268 | 4_2:+47414183 | Msa0603200:CDS |
ACTGATACGGAACGTTTGAT+CGG | 0.504694 | 4_2:+47412163 | Msa0603200:CDS |
CAAAACACATACATATAACT+AGG | 0.504798 | 4_2:-47414835 | None:intergenic |
GATACATCCTTGCAATGATA+GGG | 0.505117 | 4_2:-47414648 | None:intergenic |
GGAAATTGAGAAGATGGTGC+AGG | 0.506093 | 4_2:+47414375 | Msa0603200:CDS |
CCACTTCCACTGCCAGCAGC+AGG | 0.506743 | 4_2:-47414715 | None:intergenic |
GAAATTGATTCATTGTTTGA+GGG | 0.510562 | 4_2:+47413683 | Msa0603200:CDS |
TGCTGAAGAGATATCTTCCA+TGG | 0.512232 | 4_2:+47413175 | Msa0603200:CDS |
CAATCATTGGTTTGTCAGCA+GGG | 0.512365 | 4_2:-47413118 | None:intergenic |
TGAGGAACACCCCTTGGAGC+AGG | 0.513433 | 4_2:-47414232 | None:intergenic |
AGTAGAGGAAAGGGTCCTCT+TGG | 0.513969 | 4_2:-47413645 | None:intergenic |
TCAGCAGAGGACAAGACTAC+AGG | 0.515526 | 4_2:+47414301 | Msa0603200:CDS |
TACCGAAAACAGTGTTAGTA+GGG | 0.517002 | 4_2:-47412216 | None:intergenic |
GTCTCCAAACCAAGGGAAAG+AGG | 0.524557 | 4_2:-47414028 | None:intergenic |
ACTCGTGATAACAATCTGTT+GGG | 0.525563 | 4_2:+47414184 | Msa0603200:CDS |
AAAATTGAAGATGCTATTGA+GGG | 0.529908 | 4_2:+47414541 | Msa0603200:CDS |
AAAGTACAAGTCTGAGGATG+AGG | 0.531693 | 4_2:+47414405 | Msa0603200:CDS |
TGAATTTGAAGACAAGATGA+AGG | 0.531804 | 4_2:+47414606 | Msa0603200:CDS |
TGAAGACAAGATGAAGGAGC+TGG | 0.532976 | 4_2:+47414612 | Msa0603200:CDS |
CTTGGTTTGGAGACTGCAGG+AGG | 0.533555 | 4_2:+47414037 | Msa0603200:CDS |
TAGTACAACGAACTCCATCT+AGG | 0.537674 | 4_2:+47414865 | Msa0603200:three_prime_UTR |
GATAAGAAAGCTACAAGTAC+CGG | 0.542379 | 4_2:+47413386 | Msa0603200:CDS |
CCCAAATCGATTCCAATCGC+AGG | 0.542979 | 4_2:-47412043 | None:intergenic |
TCAGTGAAAGCAACATAAGA+AGG | 0.544801 | 4_2:-47412145 | None:intergenic |
TGAGACATTTAAAATACCAT+TGG | 0.546511 | 4_2:-47414281 | None:intergenic |
TGTGAATCATTGAAGTAAGC+AGG | 0.547923 | 4_2:-47413269 | None:intergenic |
AAGAATAAGAAGGATATCAG+TGG | 0.551907 | 4_2:+47413578 | Msa0603200:CDS |
TGATGAAGCCGTTGCATATG+GGG | 0.552611 | 4_2:+47413931 | Msa0603200:CDS |
ATGCCAAGCGTTTAATTGGT+AGG | 0.552994 | 4_2:+47413033 | Msa0603200:CDS |
AATGGTGGTTTGAGCAGTAG+AGG | 0.553384 | 4_2:-47413660 | None:intergenic |
GGGGCTATTCAATGGTTGGA+TGG | 0.553727 | 4_2:+47414562 | Msa0603200:CDS |
GGTTTGAGCAGTAGAGGAAA+GGG | 0.553832 | 4_2:-47413654 | None:intergenic |
CACCACTCAAAATAGCAGCT+TGG | 0.555458 | 4_2:-47413961 | None:intergenic |
AACAAGTTTCAATGCATTGG+CGG | 0.556820 | 4_2:+47414980 | Msa0603200:three_prime_UTR |
TGGTGATGCTGGAGGAGCCA+TGG | 0.557888 | 4_2:+47414681 | Msa0603200:CDS |
ATCATTGCAAGGATGTATCA+AGG | 0.560478 | 4_2:+47414652 | Msa0603200:CDS |
TTTGAGGTGAAAGCTACTGC+TGG | 0.564230 | 4_2:+47413485 | Msa0603200:CDS |
TGCTTTGACATTGATGCCAA+TGG | 0.565546 | 4_2:+47414265 | Msa0603200:CDS |
GTGATCTGAGGAACACCCCT+TGG | 0.567797 | 4_2:-47414238 | None:intergenic |
GGAACAACATATTCATGTGT+TGG | 0.568612 | 4_2:+47412064 | Msa0603200:CDS |
CAGCAGAGGACAAGACTACA+GGG | 0.570449 | 4_2:+47414302 | Msa0603200:CDS |
CTTCATCTTCATAAGAACCA+TGG | 0.578877 | 4_2:-47413192 | None:intergenic |
CACAACCATTCCTACCAAGA+AGG | 0.580287 | 4_2:+47414087 | Msa0603200:CDS |
TGGTTTGAGCAGTAGAGGAA+AGG | 0.580792 | 4_2:-47413655 | None:intergenic |
CATTCCTACCAAGAAGGAGC+AGG | 0.582400 | 4_2:+47414093 | Msa0603200:CDS |
TCACTTCTTACTATTGAGGA+AGG | 0.584344 | 4_2:+47413458 | Msa0603200:CDS |
AGCAGGACCATCCTCATCCA+TGG | 0.585907 | 4_2:-47414698 | None:intergenic |
TGTATGAAGGCGAAAGAACA+AGG | 0.586977 | 4_2:+47414161 | Msa0603200:CDS |
CAATCACCAATGACAAGGGT+AGG | 0.589395 | 4_2:+47414341 | Msa0603200:CDS |
TAGTAGGGTTCATAGCAACT+TGG | 0.589835 | 4_2:-47412201 | None:intergenic |
ATTATGGCTGGAAAAGGTGA+AGG | 0.590193 | 4_2:+47412019 | Msa0603200:exon |
GCAAGGATGTATCAAGGTGC+TGG | 0.591076 | 4_2:+47414658 | Msa0603200:CDS |
AAGATAAACACGAATTTGAG+TGG | 0.591280 | 4_2:-47415005 | None:intergenic |
GACAAGATGAAGGAGCTGGA+GGG | 0.594000 | 4_2:+47414616 | Msa0603200:CDS |
TGAGGGAAATGAGAAAGTAC+AGG | 0.596958 | 4_2:+47413982 | Msa0603200:CDS |
TCCTGCAGTCTCCAAACCAA+GGG | 0.603057 | 4_2:-47414035 | None:intergenic |
TGCTGGAGGAGCCATGGATG+AGG | 0.603777 | 4_2:+47414687 | Msa0603200:CDS |
CTCCTGCAGTCTCCAAACCA+AGG | 0.604106 | 4_2:-47414036 | None:intergenic |
GAAATCATAGCAAATGATCA+GGG | 0.604960 | 4_2:+47412109 | Msa0603200:CDS |
TGGTTGGATGGAAATCAACT+TGG | 0.605882 | 4_2:+47414574 | Msa0603200:CDS |
CAAGGGTAGGCTTTCCAAAG+AGG | 0.607535 | 4_2:+47414354 | Msa0603200:CDS |
TTTGCAACCCTATCATTGCA+AGG | 0.610006 | 4_2:+47414641 | Msa0603200:CDS |
GTGTTGATTCAGGTGTATGA+AGG | 0.610158 | 4_2:+47414148 | Msa0603200:CDS |
CGTCAAGCTACCAAGGATGC+CGG | 0.612550 | 4_2:+47413293 | Msa0603200:CDS |
AGAACTATGCCTACAACATG+AGG | 0.614338 | 4_2:+47414464 | Msa0603200:CDS |
TGTGGTGAACTATAAGGCGG+AGG | 0.616582 | 4_2:+47413139 | Msa0603200:CDS |
GACTGCTGCCCCATATGCAA+CGG | 0.621746 | 4_2:-47413939 | None:intergenic |
TACAGAGCGACATGAAATTG+TGG | 0.624043 | 4_2:+47413075 | Msa0603200:CDS |
TGGATCTACTAGGATTCCGA+AGG | 0.625450 | 4_2:+47413850 | Msa0603200:CDS |
AGCTGAAAAGTACAAGTCTG+AGG | 0.625787 | 4_2:+47414399 | Msa0603200:CDS |
ACCTACTCTGATAACCAACC+TGG | 0.627630 | 4_2:+47414124 | Msa0603200:CDS |
GGATGGAAATCAACTTGGAG+AGG | 0.632319 | 4_2:+47414579 | Msa0603200:CDS |
TGGTACAACAATTAAGAATG+CGG | 0.632992 | 4_2:+47413235 | Msa0603200:CDS |
TAAGCAATAGCAGCAGCAGT+AGG | 0.633763 | 4_2:-47413356 | None:intergenic |
AACACCTGCTCCTTCTTGGT+AGG | 0.636528 | 4_2:-47414097 | None:intergenic |
AGACAAGATGAAGGAGCTGG+AGG | 0.638733 | 4_2:+47414615 | Msa0603200:CDS |
GGAACACCCCTTGGAGCAGG+AGG | 0.642035 | 4_2:-47414229 | None:intergenic |
GAAGATGAAGGAGATTGCAG+AGG | 0.642514 | 4_2:+47413205 | Msa0603200:CDS |
GGTGCTGGTGGTGATGCTGG+AGG | 0.646421 | 4_2:+47414673 | Msa0603200:CDS |
TCAAAGCAGACAGTGATCTG+AGG | 0.646469 | 4_2:-47414250 | None:intergenic |
GGATATCAGTGGAAATCCGA+GGG | 0.650254 | 4_2:+47413589 | Msa0603200:CDS |
AGGATATCAGTGGAAATCCG+AGG | 0.651537 | 4_2:+47413588 | Msa0603200:CDS |
TACACCTGAATCAACACACC+AGG | 0.652080 | 4_2:-47414142 | None:intergenic |
AATTGAAGATGCTATTGAGG+GGG | 0.652473 | 4_2:+47414543 | Msa0603200:CDS |
ATTACAATCACCAATGACAA+GGG | 0.655670 | 4_2:+47414337 | Msa0603200:CDS |
GGCATACCTCCTGCTCCAAG+GGG | 0.657082 | 4_2:+47414223 | Msa0603200:CDS |
GATTACAATCACCAATGACA+AGG | 0.657271 | 4_2:+47414336 | Msa0603200:CDS |
GGAGGAGCCATGGATGAGGA+TGG | 0.657990 | 4_2:+47414691 | Msa0603200:CDS |
CCTGAATCAACACACCAGGT+TGG | 0.659727 | 4_2:-47414138 | None:intergenic |
TTCACAACGTCAAGCTACCA+AGG | 0.660328 | 4_2:+47413286 | Msa0603200:CDS |
CTGCTTGTGAGAGAGCCAAG+AGG | 0.662258 | 4_2:+47413630 | Msa0603200:CDS |
ACCAGGTTGGTTATCAGAGT+AGG | 0.664582 | 4_2:-47414125 | None:intergenic |
TGCTGACAAACCAATGATTG+TGG | 0.668634 | 4_2:+47413121 | Msa0603200:CDS |
AGGATGTATCAAGGTGCTGG+TGG | 0.672624 | 4_2:+47414661 | Msa0603200:CDS |
TTATGGCTGGAAAAGGTGAA+GGG | 0.679450 | 4_2:+47412020 | Msa0603200:exon |
AAATTGAAGATGCTATTGAG+GGG | 0.691800 | 4_2:+47414542 | Msa0603200:CDS |
GATTGTGGTGAACTATAAGG+CGG | 0.709553 | 4_2:+47413136 | Msa0603200:CDS |
ATTGAGTCCAGAAATGACAC+CGG | 0.722092 | 4_2:-47413312 | None:intergenic |
GCTGGTGATACACATTTGGG+AGG | 0.733697 | 4_2:+47413503 | Msa0603200:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCAAAAATTTTACAATAATT+AGG | - | chr4_2:47412371-47412390 | None:intergenic | 10.0% |
!! | TTATTAAAAAAACAGATTAC+TGG | - | chr4_2:47412461-47412480 | None:intergenic | 15.0% |
!!! | GTTATTTTTATGTAGTAAAT+AGG | + | chr4_2:47412897-47412916 | Msa0603200:intron | 15.0% |
!!! | TTTTCTTTTATTGTTAATCA+TGG | + | chr4_2:47414903-47414922 | Msa0603200:three_prime_UTR | 15.0% |
!!! | AAAATTTTTGATCTTCATCT+TGG | + | chr4_2:47412380-47412399 | Msa0603200:intron | 20.0% |
!!! | ATTGTTGTTGATAATAACTT+GGG | + | chr4_2:47412537-47412556 | Msa0603200:intron | 20.0% |
!! | TGGAACAGAATAAAATTAAA+AGG | - | chr4_2:47412596-47412615 | None:intergenic | 20.0% |
!!! | AAATTCACTTTTCTATCTTT+TGG | - | chr4_2:47412616-47412635 | None:intergenic | 20.0% |
!!! | ATTGATTTGGTTATATGATT+AGG | + | chr4_2:47412735-47412754 | Msa0603200:intron | 20.0% |
!!! | TTAAGTTTTAGTATGTAAGT+AGG | + | chr4_2:47412778-47412797 | Msa0603200:intron | 20.0% |
!! | AAACAATGAATCAATTTCAA+TGG | - | chr4_2:47413681-47413700 | None:intergenic | 20.0% |
!! | TTGTTATGATAAATTGATCA+TGG | + | chr4_2:47414951-47414970 | Msa0603200:three_prime_UTR | 20.0% |
!!! | TGAATAGAATTCTTCAATTT+TGG | + | chr4_2:47415079-47415098 | Msa0603200:three_prime_UTR | 20.0% |
! | AAAAACTAGGGAAAAAACTA+GGG | - | chr4_2:47411977-47411996 | None:intergenic | 25.0% |
!! | CCATAATCTCACTAAATTTT+GGG | - | chr4_2:47412006-47412025 | None:intergenic | 25.0% |
! | ACTGAAACAGAATAAAACTT+CGG | - | chr4_2:47412277-47412296 | None:intergenic | 25.0% |
!! | TTTGAAATTTCTAATGCATG+AGG | + | chr4_2:47412336-47412355 | Msa0603200:intron | 25.0% |
!!! | GATTGTTGTTGATAATAACT+TGG | + | chr4_2:47412536-47412555 | Msa0603200:intron | 25.0% |
!! | TTTTGCATTGTTTATACGAT+TGG | + | chr4_2:47412663-47412682 | Msa0603200:intron | 25.0% |
! | CATTGTTTATACGATTGATT+TGG | + | chr4_2:47412722-47412741 | Msa0603200:intron | 25.0% |
!! | AGAAGTAAGATTGTTGATAA+TGG | + | chr4_2:47412941-47412960 | Msa0603200:intron | 25.0% |
!! | AATAAGAACATTCTTTTCAC+CGG | - | chr4_2:47413408-47413427 | None:intergenic | 25.0% |
!!! | AATGTTCTTATTTTCGATCT+TGG | + | chr4_2:47413416-47413435 | Msa0603200:CDS | 25.0% |
!!! | TGAAGATTTTGATAACAGAA+TGG | + | chr4_2:47413526-47413545 | Msa0603200:CDS | 25.0% |
! | TCTTGAATTCTTGAACAAAA+TGG | - | chr4_2:47413556-47413575 | None:intergenic | 25.0% |
!! | ATTTTGTTCAAGAATTCAAG+AGG | + | chr4_2:47413555-47413574 | Msa0603200:CDS | 25.0% |
!! | TGAAATTGATTCATTGTTTG+AGG | + | chr4_2:47413682-47413701 | Msa0603200:CDS | 25.0% |
!! | GAAATTGATTCATTGTTTGA+GGG | + | chr4_2:47413683-47413702 | Msa0603200:CDS | 25.0% |
!! | TGAGACATTTAAAATACCAT+TGG | - | chr4_2:47414284-47414303 | None:intergenic | 25.0% |
! | AAAATTGAAGATGCTATTGA+GGG | + | chr4_2:47414541-47414560 | Msa0603200:CDS | 25.0% |
!! | AATCAACTTCCTCAATTTTT+GGG | - | chr4_2:47414747-47414766 | None:intergenic | 25.0% |
!! | TAATCAACTTCCTCAATTTT+TGG | - | chr4_2:47414748-47414767 | None:intergenic | 25.0% |
! | CAAAACACATACATATAACT+AGG | - | chr4_2:47414838-47414857 | None:intergenic | 25.0% |
!! | CTAGTTATATGTATGTGTTT+TGG | + | chr4_2:47414836-47414855 | Msa0603200:three_prime_UTR | 25.0% |
!!! | ATATGTATGTGTTTTGGTTT+AGG | + | chr4_2:47414842-47414861 | Msa0603200:three_prime_UTR | 25.0% |
!!! | CTTCAATTTTGGTTTTAGTT+TGG | + | chr4_2:47415090-47415109 | Msa0603200:three_prime_UTR | 25.0% |
GAAAAACTAGGGAAAAAACT+AGG | - | chr4_2:47411978-47411997 | None:intergenic | 30.0% | |
TTTGGGAATGAGAAAAACTA+GGG | - | chr4_2:47411989-47412008 | None:intergenic | 30.0% | |
!! | TTTTGGGAATGAGAAAAACT+AGG | - | chr4_2:47411990-47412009 | None:intergenic | 30.0% |
CCCAAAATTTAGTGAGATTA+TGG | + | chr4_2:47412003-47412022 | Msa0603200:exon | 30.0% | |
! | GCCATAATCTCACTAAATTT+TGG | - | chr4_2:47412007-47412026 | None:intergenic | 30.0% |
AAATTTAGTGAGATTATGGC+TGG | + | chr4_2:47412007-47412026 | Msa0603200:exon | 30.0% | |
TGAAATCATAGCAAATGATC+AGG | + | chr4_2:47412108-47412127 | Msa0603200:CDS | 30.0% | |
GAAATCATAGCAAATGATCA+GGG | + | chr4_2:47412109-47412128 | Msa0603200:CDS | 30.0% | |
!! | TTATGTTGCTTTCACTGATA+CGG | + | chr4_2:47412150-47412169 | Msa0603200:CDS | 30.0% |
TTGATCTTCATCTTGGTTAT+AGG | + | chr4_2:47412387-47412406 | Msa0603200:intron | 30.0% | |
GGTTATAGGATTAGATGATT+AGG | + | chr4_2:47412401-47412420 | Msa0603200:intron | 30.0% | |
! | CATTGTTTATACGATTGGTT+TGG | + | chr4_2:47412668-47412687 | Msa0603200:intron | 30.0% |
!! | GATTGGTTTGGTTATATGTT+AGG | + | chr4_2:47412680-47412699 | Msa0603200:intron | 30.0% |
! | AGAAGTAAGATTGTTGATGA+TGG | + | chr4_2:47412822-47412841 | Msa0603200:intron | 30.0% |
!!! | TGTTGATAATGGTTTTGCAT+TGG | + | chr4_2:47412952-47412971 | Msa0603200:intron | 30.0% |
TTATAGTTCACCACAATCAT+TGG | - | chr4_2:47413134-47413153 | None:intergenic | 30.0% | |
AATGATTGTGGTGAACTATA+AGG | + | chr4_2:47413133-47413152 | Msa0603200:CDS | 30.0% | |
TGGTACAACAATTAAGAATG+CGG | + | chr4_2:47413235-47413254 | Msa0603200:CDS | 30.0% | |
TGTTTCACTTCTTACTATTG+AGG | + | chr4_2:47413454-47413473 | Msa0603200:CDS | 30.0% | |
!!! | TATTGAGGAAGGTATTTTTG+AGG | + | chr4_2:47413469-47413488 | Msa0603200:CDS | 30.0% |
ATTCAAGAGGAAGAATAAGA+AGG | + | chr4_2:47413568-47413587 | Msa0603200:CDS | 30.0% | |
AAGAATAAGAAGGATATCAG+TGG | + | chr4_2:47413578-47413597 | Msa0603200:CDS | 30.0% | |
CAATGAATCAATTTCAATGG+TGG | - | chr4_2:47413678-47413697 | None:intergenic | 30.0% | |
! | GGATTTGTTTAGAAAGTGTA+TGG | + | chr4_2:47413757-47413776 | Msa0603200:CDS | 30.0% |
! | CTTTTGCAAGATTTCTTCAA+TGG | + | chr4_2:47413881-47413900 | Msa0603200:CDS | 30.0% |
!! | TATTTTAAATGTCTCAGCAG+AGG | + | chr4_2:47414288-47414307 | Msa0603200:CDS | 30.0% |
ATTACAATCACCAATGACAA+GGG | + | chr4_2:47414337-47414356 | Msa0603200:CDS | 30.0% | |
GAAAATTGAAGATGCTATTG+AGG | + | chr4_2:47414540-47414559 | Msa0603200:CDS | 30.0% | |
AAATTGAAGATGCTATTGAG+GGG | + | chr4_2:47414542-47414561 | Msa0603200:CDS | 30.0% | |
TGAATTTGAAGACAAGATGA+AGG | + | chr4_2:47414606-47414625 | Msa0603200:CDS | 30.0% | |
! | AAGTTGATTAAGCTGAACTT+TGG | + | chr4_2:47414758-47414777 | Msa0603200:exon | 30.0% |
ATTAAGCTGAACTTTGGTAT+TGG | + | chr4_2:47414764-47414783 | Msa0603200:exon | 30.0% | |
TTAAGCTGAACTTTGGTATT+GGG | + | chr4_2:47414765-47414784 | Msa0603200:exon | 30.0% | |
! | AACTTTGGTATTGGGATTTA+TGG | + | chr4_2:47414773-47414792 | Msa0603200:three_prime_UTR | 30.0% |
! | ACTTTGGTATTGGGATTTAT+GGG | + | chr4_2:47414774-47414793 | Msa0603200:three_prime_UTR | 30.0% |
TCAAACAAGTTTCAATGCAT+TGG | + | chr4_2:47414977-47414996 | Msa0603200:three_prime_UTR | 30.0% | |
AAGATAAACACGAATTTGAG+TGG | - | chr4_2:47415008-47415027 | None:intergenic | 30.0% | |
GGAACAACATATTCATGTGT+TGG | + | chr4_2:47412064-47412083 | Msa0603200:CDS | 35.0% | |
! | CATATTCATGTGTTGGTGTT+TGG | + | chr4_2:47412071-47412090 | Msa0603200:CDS | 35.0% |
TCAGTGAAAGCAACATAAGA+AGG | - | chr4_2:47412148-47412167 | None:intergenic | 35.0% | |
! | AACCCTACTAACACTGTTTT+CGG | + | chr4_2:47412214-47412233 | Msa0603200:CDS | 35.0% |
TACCGAAAACAGTGTTAGTA+GGG | - | chr4_2:47412219-47412238 | None:intergenic | 35.0% | |
TTACCGAAAACAGTGTTAGT+AGG | - | chr4_2:47412220-47412239 | None:intergenic | 35.0% | |
TCGGAAAATCAAGCATTAAG+AGG | - | chr4_2:47412258-47412277 | None:intergenic | 35.0% | |
ACTGATTGTGTTTGCTTGTT+TGG | + | chr4_2:47413001-47413020 | Msa0603200:intron | 35.0% | |
CTTCATCTTCATAAGAACCA+TGG | - | chr4_2:47413195-47413214 | None:intergenic | 35.0% | |
CATGGTTCTTATGAAGATGA+AGG | + | chr4_2:47413193-47413212 | Msa0603200:CDS | 35.0% | |
TGTGAATCATTGAAGTAAGC+AGG | - | chr4_2:47413272-47413291 | None:intergenic | 35.0% | |
GATAAGAAAGCTACAAGTAC+CGG | + | chr4_2:47413386-47413405 | Msa0603200:CDS | 35.0% | |
!!! | GTTCTTATTTTCGATCTTGG+TGG | + | chr4_2:47413419-47413438 | Msa0603200:CDS | 35.0% |
TCACTTCTTACTATTGAGGA+AGG | + | chr4_2:47413458-47413477 | Msa0603200:CDS | 35.0% | |
!! | GTTGATGATGTTGTTCTAGT+TGG | + | chr4_2:47413827-47413846 | Msa0603200:CDS | 35.0% |
TGCAAAAGTTGTTGAACCTT+CGG | - | chr4_2:47413869-47413888 | None:intergenic | 35.0% | |
GCAAGATTTCTTCAATGGAA+AGG | + | chr4_2:47413886-47413905 | Msa0603200:CDS | 35.0% | |
ACTCGTGATAACAATCTGTT+GGG | + | chr4_2:47414184-47414203 | Msa0603200:CDS | 35.0% | |
GATTACAATCACCAATGACA+AGG | + | chr4_2:47414336-47414355 | Msa0603200:CDS | 35.0% | |
CATCTTCTCAATTTCCTCTT+TGG | - | chr4_2:47414371-47414390 | None:intergenic | 35.0% | |
CAAAGAGGAAATTGAGAAGA+TGG | + | chr4_2:47414369-47414388 | Msa0603200:CDS | 35.0% | |
! | ATAGTTCTCAAGCGCATTTT+TGG | - | chr4_2:47414452-47414471 | None:intergenic | 35.0% |
AATTGAAGATGCTATTGAGG+GGG | + | chr4_2:47414543-47414562 | Msa0603200:CDS | 35.0% | |
GATACATCCTTGCAATGATA+GGG | - | chr4_2:47414651-47414670 | None:intergenic | 35.0% | |
TGATACATCCTTGCAATGAT+AGG | - | chr4_2:47414652-47414671 | None:intergenic | 35.0% | |
ATCATTGCAAGGATGTATCA+AGG | + | chr4_2:47414652-47414671 | Msa0603200:CDS | 35.0% | |
GTACATTGAAGTAACCTAGA+TGG | - | chr4_2:47414882-47414901 | None:intergenic | 35.0% | |
AACAAGTTTCAATGCATTGG+CGG | + | chr4_2:47414980-47414999 | Msa0603200:three_prime_UTR | 35.0% | |
TCGTGTTTATCTTTCTCAGT+TGG | + | chr4_2:47415015-47415034 | Msa0603200:three_prime_UTR | 35.0% | |
CGTGTTTATCTTTCTCAGTT+GGG | + | chr4_2:47415016-47415035 | Msa0603200:three_prime_UTR | 35.0% | |
AGTGAGATTATGGCTGGAAA+AGG | + | chr4_2:47412013-47412032 | Msa0603200:exon | 40.0% | |
ATTATGGCTGGAAAAGGTGA+AGG | + | chr4_2:47412019-47412038 | Msa0603200:exon | 40.0% | |
TTATGGCTGGAAAAGGTGAA+GGG | + | chr4_2:47412020-47412039 | Msa0603200:exon | 40.0% | |
ACTGATACGGAACGTTTGAT+CGG | + | chr4_2:47412163-47412182 | Msa0603200:CDS | 40.0% | |
TAGTAGGGTTCATAGCAACT+TGG | - | chr4_2:47412204-47412223 | None:intergenic | 40.0% | |
!! | TGTTGATGATGGTCTTGCAT+TGG | + | chr4_2:47412833-47412852 | Msa0603200:intron | 40.0% |
ATCCTCAAGTGATTGTGCAT+AGG | + | chr4_2:47412875-47412894 | Msa0603200:intron | 40.0% | |
AACCTATGCACAATCACTTG+AGG | - | chr4_2:47412880-47412899 | None:intergenic | 40.0% | |
TCAGATGCCAAGCGTTTAAT+TGG | + | chr4_2:47413029-47413048 | Msa0603200:intron | 40.0% | |
ATGCCAAGCGTTTAATTGGT+AGG | + | chr4_2:47413033-47413052 | Msa0603200:CDS | 40.0% | |
TACAGAGCGACATGAAATTG+TGG | + | chr4_2:47413075-47413094 | Msa0603200:CDS | 40.0% | |
CATGAAATTGTGGCCATTCA+AGG | + | chr4_2:47413085-47413104 | Msa0603200:CDS | 40.0% | |
!! | CAATCATTGGTTTGTCAGCA+GGG | - | chr4_2:47413121-47413140 | None:intergenic | 40.0% |
!! | ACAATCATTGGTTTGTCAGC+AGG | - | chr4_2:47413122-47413141 | None:intergenic | 40.0% |
TGCTGACAAACCAATGATTG+TGG | + | chr4_2:47413121-47413140 | Msa0603200:CDS | 40.0% | |
GATTGTGGTGAACTATAAGG+CGG | + | chr4_2:47413136-47413155 | Msa0603200:CDS | 40.0% | |
TGCTGAAGAGATATCTTCCA+TGG | + | chr4_2:47413175-47413194 | Msa0603200:CDS | 40.0% | |
ATTGAGTCCAGAAATGACAC+CGG | - | chr4_2:47413315-47413334 | None:intergenic | 40.0% | |
!! | CTTATTTTCGATCTTGGTGG+TGG | + | chr4_2:47413422-47413441 | Msa0603200:CDS | 40.0% |
TACTGCTGGTGATACACATT+TGG | + | chr4_2:47413499-47413518 | Msa0603200:CDS | 40.0% | |
ACTGCTGGTGATACACATTT+GGG | + | chr4_2:47413500-47413519 | Msa0603200:CDS | 40.0% | |
CATGTTGAGCTCTTCAAAAC+GGG | - | chr4_2:47413738-47413757 | None:intergenic | 40.0% | |
CCATGTTGAGCTCTTCAAAA+CGG | - | chr4_2:47413739-47413758 | None:intergenic | 40.0% | |
!! | AGCCTGTTGAGAAGTGTTTA+AGG | + | chr4_2:47413780-47413799 | Msa0603200:CDS | 40.0% |
!! | GCCTGTTGAGAAGTGTTTAA+GGG | + | chr4_2:47413781-47413800 | Msa0603200:CDS | 40.0% |
TCCCTTAAACACTTCTCAAC+AGG | - | chr4_2:47413785-47413804 | None:intergenic | 40.0% | |
GTGTTTAAGGGATGCTAAGA+TGG | + | chr4_2:47413793-47413812 | Msa0603200:CDS | 40.0% | |
! | GATGATGTTGTTCTAGTTGG+TGG | + | chr4_2:47413830-47413849 | Msa0603200:CDS | 40.0% |
!! | TTCTAGTTGGTGGATCTACT+AGG | + | chr4_2:47413840-47413859 | Msa0603200:CDS | 40.0% |
! | TGAGGGAAATGAGAAAGTAC+AGG | + | chr4_2:47413982-47414001 | Msa0603200:CDS | 40.0% |
GTAGGAATGGTTGTGTTTCT+CGG | - | chr4_2:47414082-47414101 | None:intergenic | 40.0% | |
!! | GTGTTGATTCAGGTGTATGA+AGG | + | chr4_2:47414148-47414167 | Msa0603200:CDS | 40.0% |
TGTATGAAGGCGAAAGAACA+AGG | + | chr4_2:47414161-47414180 | Msa0603200:CDS | 40.0% | |
GACTCGTGATAACAATCTGT+TGG | + | chr4_2:47414183-47414202 | Msa0603200:CDS | 40.0% | |
TGCTTTGACATTGATGCCAA+TGG | + | chr4_2:47414265-47414284 | Msa0603200:CDS | 40.0% | |
! | AGCTGAAAAGTACAAGTCTG+AGG | + | chr4_2:47414399-47414418 | Msa0603200:CDS | 40.0% |
AAAGTACAAGTCTGAGGATG+AGG | + | chr4_2:47414405-47414424 | Msa0603200:CDS | 40.0% | |
AGAACTATGCCTACAACATG+AGG | + | chr4_2:47414464-47414483 | Msa0603200:CDS | 40.0% | |
GATTGTGTTCCTCATGTTGT+AGG | - | chr4_2:47414476-47414495 | None:intergenic | 40.0% | |
TGGTTGGATGGAAATCAACT+TGG | + | chr4_2:47414574-47414593 | Msa0603200:CDS | 40.0% | |
TTTGCAACCCTATCATTGCA+AGG | + | chr4_2:47414641-47414660 | Msa0603200:CDS | 40.0% | |
! | GGGTGATTCATGATTTTGCA+AGG | + | chr4_2:47414794-47414813 | Msa0603200:three_prime_UTR | 40.0% |
TAGTACAACGAACTCCATCT+AGG | + | chr4_2:47414865-47414884 | Msa0603200:three_prime_UTR | 40.0% | |
! | TCAGTTGGGTAGTTTTTGTC+AGG | + | chr4_2:47415030-47415049 | Msa0603200:three_prime_UTR | 40.0% |
! | CCTGCGATTGGAATCGATTT+GGG | + | chr4_2:47412043-47412062 | Msa0603200:CDS | 45.0% |
TCGCCTACCAATTAAACGCT+TGG | - | chr4_2:47413039-47413058 | None:intergenic | 45.0% | |
TAGGCGAATCAGCGATGTTT+CGG | + | chr4_2:47413052-47413071 | Msa0603200:CDS | 45.0% | |
GAAGATGAAGGAGATTGCAG+AGG | + | chr4_2:47413205-47413224 | Msa0603200:CDS | 45.0% | |
GAGATTGCAGAGGCTTATCT+TGG | + | chr4_2:47413215-47413234 | Msa0603200:CDS | 45.0% | |
TTCACAACGTCAAGCTACCA+AGG | + | chr4_2:47413286-47413305 | Msa0603200:CDS | 45.0% | |
TAAGCAATAGCAGCAGCAGT+AGG | - | chr4_2:47413359-47413378 | None:intergenic | 45.0% | |
ACTGCTGCTGCTATTGCTTA+TGG | + | chr4_2:47413359-47413378 | Msa0603200:CDS | 45.0% | |
! | TTTGAGGTGAAAGCTACTGC+TGG | + | chr4_2:47413485-47413504 | Msa0603200:CDS | 45.0% |
AGGATATCAGTGGAAATCCG+AGG | + | chr4_2:47413588-47413607 | Msa0603200:CDS | 45.0% | |
GGATATCAGTGGAAATCCGA+GGG | + | chr4_2:47413589-47413608 | Msa0603200:CDS | 45.0% | |
GGTTTGAGCAGTAGAGGAAA+GGG | - | chr4_2:47413657-47413676 | None:intergenic | 45.0% | |
TGGTTTGAGCAGTAGAGGAA+AGG | - | chr4_2:47413658-47413677 | None:intergenic | 45.0% | |
AATGGTGGTTTGAGCAGTAG+AGG | - | chr4_2:47413663-47413682 | None:intergenic | 45.0% | |
!!! | CCGTTTTGAAGAGCTCAACA+TGG | + | chr4_2:47413736-47413755 | Msa0603200:CDS | 45.0% |
TGGATCTACTAGGATTCCGA+AGG | + | chr4_2:47413850-47413869 | Msa0603200:CDS | 45.0% | |
CTGATGAAGCCGTTGCATAT+GGG | + | chr4_2:47413930-47413949 | Msa0603200:CDS | 45.0% | |
TGATGAAGCCGTTGCATATG+GGG | + | chr4_2:47413931-47413950 | Msa0603200:CDS | 45.0% | |
!!! | GTCCAAGCTGCTATTTTGAG+TGG | + | chr4_2:47413959-47413978 | Msa0603200:CDS | 45.0% |
CACCACTCAAAATAGCAGCT+TGG | - | chr4_2:47413964-47413983 | None:intergenic | 45.0% | |
!!! | AGCTGCTATTTTGAGTGGTG+AGG | + | chr4_2:47413964-47413983 | Msa0603200:CDS | 45.0% |
!!! | GCTGCTATTTTGAGTGGTGA+GGG | + | chr4_2:47413965-47413984 | Msa0603200:CDS | 45.0% |
AGTACAGGATCTGTTGTTGC+TGG | + | chr4_2:47413997-47414016 | Msa0603200:CDS | 45.0% | |
GATGTTACTCCTCTTTCCCT+TGG | + | chr4_2:47414019-47414038 | Msa0603200:CDS | 45.0% | |
TACTCCTCTTTCCCTTGGTT+TGG | + | chr4_2:47414024-47414043 | Msa0603200:CDS | 45.0% | |
CACAACCATTCCTACCAAGA+AGG | + | chr4_2:47414087-47414106 | Msa0603200:CDS | 45.0% | |
ACCTACTCTGATAACCAACC+TGG | + | chr4_2:47414124-47414143 | Msa0603200:CDS | 45.0% | |
!! | ACCAGGTTGGTTATCAGAGT+AGG | - | chr4_2:47414128-47414147 | None:intergenic | 45.0% |
TACACCTGAATCAACACACC+AGG | - | chr4_2:47414145-47414164 | None:intergenic | 45.0% | |
!! | GTTGGGCAAGTTTGAGTTGT+CGG | + | chr4_2:47414201-47414220 | Msa0603200:CDS | 45.0% |
!! | TTGGGCAAGTTTGAGTTGTC+GGG | + | chr4_2:47414202-47414221 | Msa0603200:CDS | 45.0% |
TCAAAGCAGACAGTGATCTG+AGG | - | chr4_2:47414253-47414272 | None:intergenic | 45.0% | |
CAATCACCAATGACAAGGGT+AGG | + | chr4_2:47414341-47414360 | Msa0603200:CDS | 45.0% | |
GGAAATTGAGAAGATGGTGC+AGG | + | chr4_2:47414375-47414394 | Msa0603200:CDS | 45.0% | |
! | GGATGAGGAGCACAAAAAGA+AGG | + | chr4_2:47414420-47414439 | Msa0603200:CDS | 45.0% |
! | TGAGGAGCACAAAAAGAAGG+TGG | + | chr4_2:47414423-47414442 | Msa0603200:CDS | 45.0% |
CTATTGAGGGGGCTATTCAA+TGG | + | chr4_2:47414554-47414573 | Msa0603200:CDS | 45.0% | |
GGATGGAAATCAACTTGGAG+AGG | + | chr4_2:47414579-47414598 | Msa0603200:CDS | 45.0% | |
TGAAGACAAGATGAAGGAGC+TGG | + | chr4_2:47414612-47414631 | Msa0603200:CDS | 45.0% | |
GCCTGCGATTGGAATCGATT+TGG | + | chr4_2:47412042-47412061 | Msa0603200:CDS | 50.0% | |
! | CCCAAATCGATTCCAATCGC+AGG | - | chr4_2:47412046-47412065 | None:intergenic | 50.0% |
TGGCCATTCAAGGTCATTCC+TGG | + | chr4_2:47413095-47413114 | Msa0603200:CDS | 50.0% | |
TGTGGTGAACTATAAGGCGG+AGG | + | chr4_2:47413139-47413158 | Msa0603200:CDS | 50.0% | |
AGAAATGACACCGGCATCCT+TGG | - | chr4_2:47413306-47413325 | None:intergenic | 50.0% | |
!! | AAGGATGCCGGTGTCATTTC+TGG | + | chr4_2:47413305-47413324 | Msa0603200:CDS | 50.0% |
GCTGGTGATACACATTTGGG+AGG | + | chr4_2:47413503-47413522 | Msa0603200:CDS | 50.0% | |
CTCAATCTTCTCAGAGCCCT+CGG | - | chr4_2:47413608-47413627 | None:intergenic | 50.0% | |
AGTAGAGGAAAGGGTCCTCT+TGG | - | chr4_2:47413648-47413667 | None:intergenic | 50.0% | |
CCATATGCAACGGCTTCATC+AGG | - | chr4_2:47413932-47413951 | None:intergenic | 50.0% | |
CCTGATGAAGCCGTTGCATA+TGG | + | chr4_2:47413929-47413948 | Msa0603200:CDS | 50.0% | |
GTCTCCAAACCAAGGGAAAG+AGG | - | chr4_2:47414031-47414050 | None:intergenic | 50.0% | |
TCCTGCAGTCTCCAAACCAA+GGG | - | chr4_2:47414038-47414057 | None:intergenic | 50.0% | |
CTGCTCCTTCTTGGTAGGAA+TGG | - | chr4_2:47414095-47414114 | None:intergenic | 50.0% | |
CATTCCTACCAAGAAGGAGC+AGG | + | chr4_2:47414093-47414112 | Msa0603200:CDS | 50.0% | |
AACACCTGCTCCTTCTTGGT+AGG | - | chr4_2:47414100-47414119 | None:intergenic | 50.0% | |
CGAAAACACCTGCTCCTTCT+TGG | - | chr4_2:47414104-47414123 | None:intergenic | 50.0% | |
CCTGAATCAACACACCAGGT+TGG | - | chr4_2:47414141-47414160 | None:intergenic | 50.0% | |
!! | CCAACCTGGTGTGTTGATTC+AGG | + | chr4_2:47414138-47414157 | Msa0603200:CDS | 50.0% |
TCAGCAGAGGACAAGACTAC+AGG | + | chr4_2:47414301-47414320 | Msa0603200:CDS | 50.0% | |
CAGCAGAGGACAAGACTACA+GGG | + | chr4_2:47414302-47414321 | Msa0603200:CDS | 50.0% | |
GGAAAGCCTACCCTTGTCAT+TGG | - | chr4_2:47414350-47414369 | None:intergenic | 50.0% | |
CAAGGGTAGGCTTTCCAAAG+AGG | + | chr4_2:47414354-47414373 | Msa0603200:CDS | 50.0% | |
GGAGCACAAAAAGAAGGTGG+AGG | + | chr4_2:47414426-47414445 | Msa0603200:CDS | 50.0% | |
TGAGGGGGCTATTCAATGGT+TGG | + | chr4_2:47414558-47414577 | Msa0603200:CDS | 50.0% | |
GGGGCTATTCAATGGTTGGA+TGG | + | chr4_2:47414562-47414581 | Msa0603200:CDS | 50.0% | |
AGACAAGATGAAGGAGCTGG+AGG | + | chr4_2:47414615-47414634 | Msa0603200:CDS | 50.0% | |
GACAAGATGAAGGAGCTGGA+GGG | + | chr4_2:47414616-47414635 | Msa0603200:CDS | 50.0% | |
GCAAGGATGTATCAAGGTGC+TGG | + | chr4_2:47414658-47414677 | Msa0603200:CDS | 50.0% | |
!! | AGGATGTATCAAGGTGCTGG+TGG | + | chr4_2:47414661-47414680 | Msa0603200:CDS | 50.0% |
!! | TGGTGCTGGCCCAAAAATTG+AGG | + | chr4_2:47414735-47414754 | Msa0603200:CDS | 50.0% |
AAAGGTGAAGGGCCTGCGAT+TGG | + | chr4_2:47412031-47412050 | Msa0603200:CDS | 55.0% | |
GGGCCAGGAATGACCTTGAA+TGG | - | chr4_2:47413101-47413120 | None:intergenic | 55.0% | |
!! | ATTGGTTTGTCAGCAGGGCC+AGG | - | chr4_2:47413116-47413135 | None:intergenic | 55.0% |
CGTCAAGCTACCAAGGATGC+CGG | + | chr4_2:47413293-47413312 | Msa0603200:CDS | 55.0% | |
CTGCTTGTGAGAGAGCCAAG+AGG | + | chr4_2:47413630-47413649 | Msa0603200:CDS | 55.0% | |
GACTGCTGCCCCATATGCAA+CGG | - | chr4_2:47413942-47413961 | None:intergenic | 55.0% | |
!! | TCCCTTGGTTTGGAGACTGC+AGG | + | chr4_2:47414034-47414053 | Msa0603200:CDS | 55.0% |
CTCCTGCAGTCTCCAAACCA+AGG | - | chr4_2:47414039-47414058 | None:intergenic | 55.0% | |
!! | CTTGGTTTGGAGACTGCAGG+AGG | + | chr4_2:47414037-47414056 | Msa0603200:CDS | 55.0% |
GTGATCTGAGGAACACCCCT+TGG | - | chr4_2:47414241-47414260 | None:intergenic | 55.0% | |
AGCAGGACCATCCTCATCCA+TGG | - | chr4_2:47414701-47414720 | None:intergenic | 55.0% | |
GGGCATACCTCCTGCTCCAA+GGG | + | chr4_2:47414222-47414241 | Msa0603200:CDS | 60.0% | |
GGCATACCTCCTGCTCCAAG+GGG | + | chr4_2:47414223-47414242 | Msa0603200:CDS | 60.0% | |
TGAGGAACACCCCTTGGAGC+AGG | - | chr4_2:47414235-47414254 | None:intergenic | 60.0% | |
!! | CAAGGTGCTGGTGGTGATGC+TGG | + | chr4_2:47414670-47414689 | Msa0603200:CDS | 60.0% |
! | TGGTGATGCTGGAGGAGCCA+TGG | + | chr4_2:47414681-47414700 | Msa0603200:CDS | 60.0% |
TGCTGGAGGAGCCATGGATG+AGG | + | chr4_2:47414687-47414706 | Msa0603200:CDS | 60.0% | |
GGAGGAGCCATGGATGAGGA+TGG | + | chr4_2:47414691-47414710 | Msa0603200:CDS | 60.0% | |
GATGAGGATGGTCCTGCTGC+TGG | + | chr4_2:47414703-47414722 | Msa0603200:CDS | 60.0% | |
CGGGCATACCTCCTGCTCCA+AGG | + | chr4_2:47414221-47414240 | Msa0603200:CDS | 65.0% | |
GGAACACCCCTTGGAGCAGG+AGG | - | chr4_2:47414232-47414251 | None:intergenic | 65.0% | |
!! | GGTGCTGGTGGTGATGCTGG+AGG | + | chr4_2:47414673-47414692 | Msa0603200:CDS | 65.0% |
GATGGTCCTGCTGCTGGCAG+TGG | + | chr4_2:47414709-47414728 | Msa0603200:CDS | 65.0% | |
CCACTTCCACTGCCAGCAGC+AGG | - | chr4_2:47414718-47414737 | None:intergenic | 65.0% | |
CCTGCTGCTGGCAGTGGAAG+TGG | + | chr4_2:47414715-47414734 | Msa0603200:CDS | 65.0% | |
GCTGGCAGTGGAAGTGGTGC+TGG | + | chr4_2:47414721-47414740 | Msa0603200:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 47411912 | 47415124 | 47411912 | ID=Msa0603200;Name=Msa0603200 |
chr4_2 | mRNA | 47411912 | 47415124 | 47411912 | ID=Msa0603200-mRNA-1;Parent=Msa0603200;Name=Msa0603200-mRNA-1;_AED=0.26;_eAED=0.26;_QI=110|1|1|1|1|1|2|356|649 |
chr4_2 | exon | 47411912 | 47412235 | 47411912 | ID=Msa0603200-mRNA-1:exon:10857;Parent=Msa0603200-mRNA-1 |
chr4_2 | exon | 47413033 | 47415124 | 47413033 | ID=Msa0603200-mRNA-1:exon:10858;Parent=Msa0603200-mRNA-1 |
chr4_2 | five_prime_UTR | 47411912 | 47412021 | 47411912 | ID=Msa0603200-mRNA-1:five_prime_utr;Parent=Msa0603200-mRNA-1 |
chr4_2 | CDS | 47412022 | 47412235 | 47412022 | ID=Msa0603200-mRNA-1:cds;Parent=Msa0603200-mRNA-1 |
chr4_2 | CDS | 47413033 | 47414768 | 47413033 | ID=Msa0603200-mRNA-1:cds;Parent=Msa0603200-mRNA-1 |
chr4_2 | three_prime_UTR | 47414769 | 47415124 | 47414769 | ID=Msa0603200-mRNA-1:three_prime_utr;Parent=Msa0603200-mRNA-1 |
Gene Sequence |
Protein sequence |