AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0609880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0609880 MtrunA17_Chr4g0042831 95.361 388 14 2 1 384 1 388 0.0 763
Msa0609880 MtrunA17_Chr5g0418191 55.281 445 112 15 2 384 13 432 2.37e-139 404
Msa0609880 MtrunA17_Chr7g0218081 41.057 492 167 15 11 384 33 519 3.00e-101 309
Msa0609880 MtrunA17_Chr3g0101131 50.579 259 81 6 136 351 235 489 4.60e-76 246
Msa0609880 MtrunA17_Chr5g0445311 50.198 253 93 4 126 346 182 433 6.16e-76 244
Msa0609880 MtrunA17_Chr7g0243891 42.941 340 140 7 64 374 148 462 2.45e-75 243
Msa0609880 MtrunA17_Chr3g0106491 50.847 236 80 5 139 339 193 427 7.29e-72 233
Msa0609880 MtrunA17_Chr4g0004911 51.376 218 87 4 141 339 181 398 3.54e-70 228
Msa0609880 MtrunA17_Chr5g0432161 49.398 249 74 6 139 339 239 483 5.48e-68 224
Msa0609880 MtrunA17_Chr7g0263531 45.174 259 101 4 135 353 180 437 7.30e-66 215
Msa0609880 MtrunA17_Chr4g0074001 37.304 319 145 10 72 339 107 421 2.15e-46 166
Msa0609880 MtrunA17_Chr4g0074001 52.381 63 30 0 145 207 360 422 1.06e-12 69.3
Msa0609880 MtrunA17_Chr5g0447701 39.485 233 110 5 136 339 84 314 1.25e-45 161
Msa0609880 MtrunA17_Chr3g0079691 52.941 153 62 2 223 366 433 584 8.02e-42 155
Msa0609880 MtrunA17_Chr3g0079691 70.312 64 18 1 144 207 280 342 1.75e-23 102
Msa0609880 MtrunA17_Chr3g0079691 60.000 60 23 1 277 336 280 338 1.78e-14 75.1
Msa0609880 MtrunA17_Chr3g0079691 53.425 73 32 1 144 214 495 567 3.03e-14 74.3
Msa0609880 MtrunA17_Chr7g0249311 55.224 134 51 2 210 343 334 458 1.94e-40 151
Msa0609880 MtrunA17_Chr7g0249311 68.657 67 20 1 141 207 176 241 1.22e-23 102
Msa0609880 MtrunA17_Chr7g0249311 41.121 107 50 3 277 371 179 284 1.06e-15 79.0
Msa0609880 MtrunA17_Chr7g0249301 67.708 96 31 0 244 339 259 354 1.70e-39 144
Msa0609880 MtrunA17_Chr7g0249301 63.492 63 22 1 145 207 63 124 5.04e-19 87.8
Msa0609880 MtrunA17_Chr7g0249301 46.154 91 39 2 276 357 61 150 2.02e-15 77.0
Msa0609880 MtrunA17_Chr7g0249301 55.000 60 27 0 144 203 292 351 1.08e-12 68.9
Msa0609880 MtrunA17_Chr1g0188941 61.446 83 32 0 254 336 28 110 1.91e-34 123
Msa0609880 MtrunA17_Chr1g0188941 46.988 83 43 1 123 205 31 112 4.16e-18 79.3
Msa0609880 MtrunA17_Chr5g0447711 32.174 230 140 4 134 348 73 301 4.73e-30 117
Msa0609880 MtrunA17_Chr5g0447711 35.526 76 49 0 144 219 230 305 1.13e-11 65.1
Msa0609880 MtrunA17_Chr4g0051881 51.429 105 51 0 234 338 135 239 1.33e-29 117
Msa0609880 MtrunA17_Chr4g0051881 47.222 72 36 1 144 215 178 247 2.23e-14 73.6
Msa0609880 MtrunA17_Chr1g0194481 48.696 115 56 1 226 337 104 218 3.53e-29 115
Msa0609880 MtrunA17_Chr1g0194481 53.125 64 30 0 144 207 158 221 1.41e-16 80.1
Msa0609880 MtrunA17_Chr7g0270191 62.025 79 30 0 264 342 132 210 1.91e-28 112
Msa0609880 MtrunA17_Chr7g0270191 42.708 96 54 1 108 203 110 204 8.56e-16 77.4
Msa0609880 MtrunA17_Chr8g0335811 57.647 85 35 1 258 342 135 218 4.54e-28 110
Msa0609880 MtrunA17_Chr8g0335811 56.140 57 25 0 144 200 154 210 2.53e-14 71.6
Msa0609880 MtrunA17_Chr5g0443131 61.842 76 29 0 263 338 143 218 8.42e-28 111
Msa0609880 MtrunA17_Chr5g0443131 51.667 60 29 0 144 203 157 216 1.20e-14 73.9
Msa0609880 MtrunA17_Chr3g0129361 47.115 104 43 1 260 363 127 218 1.19e-27 108
Msa0609880 MtrunA17_Chr3g0129361 54.386 57 26 0 144 200 144 200 1.81e-14 72.0
Msa0609880 MtrunA17_Chr8g0383351 52.747 91 38 2 260 345 142 232 2.34e-26 105
Msa0609880 MtrunA17_Chr8g0383351 51.471 68 32 1 133 200 150 216 9.05e-16 76.3
Msa0609880 MtrunA17_Chr7g0224801 55.556 81 36 0 267 347 83 163 2.38e-26 103
Msa0609880 MtrunA17_Chr7g0224801 57.895 57 24 0 144 200 93 149 1.30e-15 74.3
Msa0609880 MtrunA17_Chr2g0294231 59.740 77 31 0 262 338 188 264 3.48e-26 108
Msa0609880 MtrunA17_Chr2g0294231 54.688 64 29 0 144 207 203 266 6.91e-17 81.6
Msa0609880 MtrunA17_Chr5g0418781 57.895 76 32 0 258 333 105 180 1.87e-25 104
Msa0609880 MtrunA17_Chr5g0418781 44.872 78 40 1 144 218 124 201 3.10e-15 75.5
Msa0609880 MtrunA17_Chr8g0386241 47.253 91 48 0 258 348 84 174 4.84e-25 100
Msa0609880 MtrunA17_Chr8g0386241 54.386 57 26 0 144 200 103 159 2.78e-15 73.6
Msa0609880 MtrunA17_Chr8g0383251 45.098 102 43 1 235 336 79 167 1.02e-24 99.8
Msa0609880 MtrunA17_Chr8g0383251 49.206 63 32 0 144 206 108 170 6.30e-12 63.9
Msa0609880 MtrunA17_Chr7g0248721 43.333 120 67 1 214 333 78 196 2.66e-23 97.1
Msa0609880 MtrunA17_Chr7g0248721 51.613 62 29 1 139 200 136 196 1.30e-13 69.7
Msa0609880 MtrunA17_Chr4g0068541 56.757 74 32 0 264 337 195 268 3.07e-23 100
Msa0609880 MtrunA17_Chr4g0068541 55.000 60 27 0 144 203 208 267 1.65e-16 80.5
Msa0609880 MtrunA17_Chr6g0485431 56.000 75 32 1 263 336 140 214 1.04e-22 98.2
Msa0609880 MtrunA17_Chr6g0485431 45.833 72 37 2 137 207 148 218 5.61e-13 69.7
Msa0609880 MtrunA17_Chr1g0147881 50.505 99 37 3 241 338 237 324 1.06e-22 97.8
Msa0609880 MtrunA17_Chr1g0150801 52.778 72 34 0 262 333 87 158 1.24e-22 93.6
Msa0609880 MtrunA17_Chr1g0150801 50.877 57 28 0 144 200 102 158 2.99e-13 67.4
Msa0609880 MtrunA17_Chr3g0129321 52.000 75 36 0 263 337 104 178 1.27e-22 94.7
Msa0609880 MtrunA17_Chr3g0129321 36.364 143 68 3 106 225 62 204 3.60e-15 73.9
Msa0609880 MtrunA17_Chr1g0189391 49.462 93 46 1 264 355 84 176 1.50e-22 97.4
Msa0609880 MtrunA17_Chr1g0189391 42.857 77 38 2 144 214 97 173 1.83e-11 64.7
Msa0609880 MtrunA17_Chr7g0270831 39.552 134 67 3 208 340 160 280 1.89e-22 98.2
Msa0609880 MtrunA17_Chr4g0025061 49.383 81 40 1 259 338 342 422 8.51e-22 97.4
Msa0609880 MtrunA17_Chr4g0025061 33.588 131 65 4 120 229 318 447 5.70e-11 64.3
Msa0609880 MtrunA17_Chr3g0099641 47.561 82 42 1 256 336 230 311 1.12e-21 96.3
Msa0609880 MtrunA17_Chr3g0099641 42.500 80 43 2 145 221 252 331 3.32e-11 64.7
Msa0609880 MtrunA17_Chr2g0288871 50.633 79 38 1 259 336 287 365 1.30e-21 96.7
Msa0609880 MtrunA17_Chr4g0075201 49.383 81 40 1 259 338 249 329 3.35e-21 95.1
Msa0609880 MtrunA17_Chr2g0322391 49.383 81 40 1 259 338 331 411 4.78e-21 95.1
Msa0609880 MtrunA17_Chr2g0322391 40.741 81 45 2 144 221 349 429 3.32e-11 64.7
Msa0609880 MtrunA17_Chr4g0060271 51.316 76 36 1 262 336 240 315 7.93e-21 94.4
Msa0609880 MtrunA17_Chr4g0060271 49.180 61 30 1 144 203 255 315 6.30e-11 63.9
Msa0609880 MtrunA17_Chr4g0051181 50.649 77 37 1 262 337 228 304 1.90e-20 92.8
Msa0609880 MtrunA17_Chr2g0302391 43.617 94 52 1 262 354 196 289 4.72e-20 91.3
Msa0609880 MtrunA17_Chr7g0216891 41.228 114 63 3 224 333 163 276 6.37e-20 91.7
Msa0609880 MtrunA17_Chr4g0071521 47.312 93 37 3 242 333 221 302 1.21e-19 88.6
Msa0609880 MtrunA17_Chr2g0333851 43.689 103 42 3 262 348 139 241 1.72e-19 88.2
Msa0609880 MtrunA17_Chr2g0333851 50.000 68 33 1 145 211 170 237 1.42e-13 70.9
Msa0609880 MtrunA17_Chr5g0401821 52.000 75 35 1 274 347 196 270 2.75e-19 87.0
Msa0609880 MtrunA17_Chr3g0136961 54.795 73 30 3 264 333 123 195 3.74e-19 87.0
Msa0609880 MtrunA17_Chr3g0136961 47.222 72 36 2 145 214 139 210 4.71e-12 66.2
Msa0609880 MtrunA17_Chr4g0025051 46.914 81 42 1 259 338 317 397 4.85e-19 89.0
Msa0609880 MtrunA17_Chr4g0053281 46.739 92 45 2 258 348 250 338 5.07e-19 87.4
Msa0609880 MtrunA17_Chr5g0432071 45.098 102 49 3 144 239 104 204 5.24e-19 84.7
Msa0609880 MtrunA17_Chr5g0432071 46.914 81 41 2 277 357 104 182 7.17e-15 73.2
Msa0609880 MtrunA17_Chr7g0270051 52.857 70 32 1 278 346 54 123 6.49e-19 85.9
Msa0609880 MtrunA17_Chr7g0270051 39.535 86 44 3 138 217 42 125 1.61e-11 64.3
Msa0609880 MtrunA17_Chr7g0238921 59.322 59 24 0 275 333 122 180 8.80e-19 86.3
Msa0609880 MtrunA17_Chr7g0238921 54.386 57 26 0 144 200 124 180 2.10e-14 73.6
Msa0609880 MtrunA17_Chr1g0184691 46.591 88 45 2 257 342 273 360 1.56e-18 86.3
Msa0609880 MtrunA17_Chr2g0284321 47.059 85 42 2 278 361 36 118 5.42e-18 82.0
Msa0609880 MtrunA17_Chr2g0284321 35.294 119 62 4 124 231 7 121 5.44e-12 64.7
Msa0609880 MtrunA17_Chr1g0150281 46.341 82 38 3 258 333 116 197 5.50e-18 83.6
Msa0609880 MtrunA17_Chr8g0379461 51.515 66 31 1 278 342 77 142 6.37e-18 82.4
Msa0609880 MtrunA17_Chr2g0293481 41.584 101 52 2 240 339 236 330 9.84e-18 84.7
Msa0609880 MtrunA17_Chr1g0188961 61.111 54 21 0 297 350 3 56 1.04e-17 77.0
Msa0609880 MtrunA17_Chr8g0387501 40.385 104 53 3 276 370 128 231 5.02e-17 80.5
Msa0609880 MtrunA17_Chr8g0387501 45.455 66 35 1 139 203 124 189 4.16e-12 66.2
Msa0609880 MtrunA17_Chr2g0319961 51.389 72 32 2 278 348 81 150 5.96e-17 80.1
Msa0609880 MtrunA17_Chr4g0024391 37.363 91 56 1 249 338 201 291 8.97e-17 81.6
Msa0609880 MtrunA17_Chr4g0001361 52.381 63 29 1 275 336 160 222 1.20e-16 80.1
Msa0609880 MtrunA17_Chr4g0001361 50.000 60 29 1 145 203 163 222 1.09e-11 65.5
Msa0609880 MtrunA17_Chr7g0248691 46.154 91 46 3 250 339 129 217 1.46e-16 80.1
Msa0609880 MtrunA17_Chr7g0248691 39.506 81 48 1 124 203 134 214 8.80e-12 65.9
Msa0609880 MtrunA17_Chr1g0202461 46.753 77 39 2 264 339 249 324 2.12e-16 80.1
Msa0609880 MtrunA17_Chr1g0202461 41.176 68 39 1 137 203 254 321 9.96e-12 65.9
Msa0609880 MtrunA17_Chr7g0228941 44.156 77 40 2 258 333 35 109 3.57e-16 74.3
Msa0609880 MtrunA17_Chr7g0228941 44.828 58 31 1 145 201 53 110 6.46e-11 59.7
Msa0609880 MtrunA17_Chr2g0289181 49.275 69 34 1 274 341 11 79 6.35e-16 76.6
Msa0609880 MtrunA17_Chr2g0289181 39.796 98 47 3 140 234 10 98 2.46e-11 63.2
Msa0609880 MtrunA17_Chr8g0348311 44.706 85 43 2 275 358 153 234 7.09e-16 78.2
Msa0609880 MtrunA17_Chr8g0348311 43.056 72 40 1 133 203 144 215 2.48e-12 67.4
Msa0609880 MtrunA17_Chr1g0188971 50.633 79 35 2 223 297 4 82 8.84e-16 72.0
Msa0609880 MtrunA17_Chr1g0150271 40.698 86 47 3 255 336 76 161 3.18e-15 75.1
Msa0609880 MtrunA17_Chr3g0139021 47.619 63 32 1 273 334 310 372 7.67e-14 72.4
Msa0609880 MtrunA17_Chr3g0126391 51.724 58 25 1 144 198 133 190 2.07e-13 70.9
Msa0609880 MtrunA17_Chr3g0126391 49.153 59 27 1 276 331 132 190 2.05e-11 64.7
Msa0609880 MtrunA17_Chr8g0347251 50.000 58 26 1 144 198 136 193 2.30e-13 70.5
Msa0609880 MtrunA17_Chr7g0275531 44.928 69 33 2 144 207 118 186 3.86e-13 69.7
Msa0609880 MtrunA17_Chr8g0387981 43.056 72 38 1 130 198 118 189 5.17e-13 69.7
Msa0609880 MtrunA17_Chr8g0387981 53.448 58 24 1 277 331 132 189 3.95e-12 67.0
Msa0609880 MtrunA17_Chr2g0315361 38.462 104 58 3 231 331 105 205 1.69e-12 67.8
Msa0609880 MtrunA17_Chr5g0419241 51.111 45 22 0 259 303 59 103 5.42e-12 62.0
Msa0609880 MtrunA17_Chr7g0244981 48.276 58 27 1 277 331 122 179 4.62e-11 63.2
Msa0609880 MtrunA17_Chr2g0315381 38.542 96 44 3 275 360 142 232 8.30e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0609880 AT1G13960.1 43.878 490 143 13 12 383 37 512 2.34e-105 320
Msa0609880 AT2G03340.1 51.047 382 116 13 59 384 146 512 5.50e-104 317
Msa0609880 AT1G13960.2 49.189 370 116 10 72 383 4 359 3.06e-94 286
Msa0609880 AT3G01080.2 41.913 439 183 15 1 384 38 459 4.09e-84 264
Msa0609880 AT3G01080.1 41.487 417 178 14 1 384 38 421 2.81e-78 247
Msa0609880 AT5G07100.2 53.589 209 81 2 131 339 11 203 1.06e-72 226
Msa0609880 AT5G07100.2 56.250 64 28 0 144 207 141 204 2.76e-15 74.7
Msa0609880 AT5G07100.2 47.143 70 37 0 277 346 24 93 9.43e-14 70.5
Msa0609880 AT5G07100.4 53.589 209 81 2 131 339 11 203 1.06e-72 226
Msa0609880 AT5G07100.4 56.250 64 28 0 144 207 141 204 2.76e-15 74.7
Msa0609880 AT5G07100.4 47.143 70 37 0 277 346 24 93 9.43e-14 70.5
Msa0609880 AT5G07100.5 53.589 209 81 2 131 339 11 203 1.06e-72 226
Msa0609880 AT5G07100.5 56.250 64 28 0 144 207 141 204 2.76e-15 74.7
Msa0609880 AT5G07100.5 47.143 70 37 0 277 346 24 93 9.43e-14 70.5
Msa0609880 AT5G07100.3 53.589 209 81 2 131 339 11 203 1.06e-72 226
Msa0609880 AT5G07100.3 56.250 64 28 0 144 207 141 204 2.76e-15 74.7
Msa0609880 AT5G07100.3 47.143 70 37 0 277 346 24 93 9.43e-14 70.5
Msa0609880 AT5G07100.1 53.589 209 81 2 131 339 104 296 2.18e-72 228
Msa0609880 AT5G07100.1 48.750 80 40 1 128 207 219 297 2.72e-15 76.3
Msa0609880 AT5G07100.1 38.947 95 47 1 263 346 92 186 5.33e-14 72.4
Msa0609880 AT4G26640.1 44.891 274 102 6 115 342 104 374 1.78e-69 226
Msa0609880 AT4G26640.1 51.351 74 34 2 275 347 137 209 1.39e-14 75.5
Msa0609880 AT4G26640.5 44.689 273 102 6 116 342 1 270 1.89e-69 223
Msa0609880 AT4G26640.5 51.351 74 34 2 275 347 33 105 1.14e-14 75.1
Msa0609880 AT4G26640.6 44.689 273 102 6 116 342 1 270 1.89e-69 223
Msa0609880 AT4G26640.6 51.351 74 34 2 275 347 33 105 1.14e-14 75.1
Msa0609880 AT4G26640.4 44.689 273 102 6 116 342 1 270 1.89e-69 223
Msa0609880 AT4G26640.4 51.351 74 34 2 275 347 33 105 1.14e-14 75.1
Msa0609880 AT4G26640.3 44.689 273 102 6 116 342 1 270 1.89e-69 223
Msa0609880 AT4G26640.3 51.351 74 34 2 275 347 33 105 1.14e-14 75.1
Msa0609880 AT4G26640.7 44.891 274 102 6 115 342 136 406 2.41e-69 227
Msa0609880 AT4G26640.7 51.351 74 34 2 275 347 169 241 1.37e-14 75.5
Msa0609880 AT4G26640.2 44.891 274 102 6 115 342 176 446 5.42e-69 227
Msa0609880 AT4G26640.2 51.351 74 34 2 275 347 209 281 1.41e-14 75.5
Msa0609880 AT2G38470.1 49.225 258 82 7 144 353 184 440 5.13e-67 221
Msa0609880 AT2G30250.1 41.176 289 133 7 86 338 102 389 4.81e-60 199
Msa0609880 AT2G04880.2 41.700 247 99 6 140 344 107 350 5.77e-55 188
Msa0609880 AT2G04880.2 45.652 92 48 2 121 212 262 351 1.48e-15 78.6
Msa0609880 AT4G30935.1 37.338 308 141 9 75 339 95 393 1.36e-46 166
Msa0609880 AT4G30935.1 50.794 63 31 0 145 207 332 394 2.84e-12 68.2
Msa0609880 AT5G56270.1 72.449 98 27 0 242 339 452 549 5.98e-43 159
Msa0609880 AT5G56270.1 67.188 64 20 1 144 207 273 335 3.95e-22 99.0
Msa0609880 AT5G56270.1 61.667 60 22 1 277 336 273 331 3.23e-16 80.9
Msa0609880 AT5G56270.1 51.316 76 36 1 128 203 472 546 2.24e-14 75.1
Msa0609880 AT4G12020.11 39.405 269 113 7 72 297 400 661 1.55e-41 156
Msa0609880 AT4G12020.11 50.820 61 29 1 276 336 467 526 3.74e-12 68.6
Msa0609880 AT4G12020.6 39.405 269 113 7 72 297 400 661 1.96e-41 156
Msa0609880 AT4G12020.6 50.820 61 29 1 276 336 467 526 2.92e-12 68.9
Msa0609880 AT4G12020.8 39.405 269 113 7 72 297 400 661 1.96e-41 156
Msa0609880 AT4G12020.8 50.820 61 29 1 276 336 467 526 2.92e-12 68.9
Msa0609880 AT4G12020.3 39.405 269 113 7 72 297 400 661 2.06e-41 156
Msa0609880 AT4G12020.3 50.820 61 29 1 276 336 467 526 3.13e-12 68.9
Msa0609880 AT4G12020.2 39.405 269 113 7 72 297 400 661 2.21e-41 156
Msa0609880 AT4G12020.2 50.820 61 29 1 276 336 467 526 3.46e-12 68.9
Msa0609880 AT4G12020.1 39.405 269 113 7 72 297 400 661 2.31e-41 156
Msa0609880 AT4G12020.1 50.820 61 29 1 276 336 467 526 3.25e-12 68.9
Msa0609880 AT4G12020.9 39.405 269 113 7 72 297 400 661 2.31e-41 156
Msa0609880 AT4G12020.9 50.820 61 29 1 276 336 467 526 3.25e-12 68.9
Msa0609880 AT4G12020.7 39.405 269 113 7 72 297 400 661 2.33e-41 156
Msa0609880 AT4G12020.7 50.820 61 29 1 276 336 467 526 3.28e-12 68.9
Msa0609880 AT4G12020.4 39.405 269 113 7 72 297 400 661 2.33e-41 156
Msa0609880 AT4G12020.4 50.820 61 29 1 276 336 467 526 3.46e-12 68.9
Msa0609880 AT4G12020.10 39.405 269 113 7 72 297 400 661 2.35e-41 156
Msa0609880 AT4G12020.10 50.820 61 29 1 276 336 467 526 3.22e-12 68.9
Msa0609880 AT4G12020.5 39.405 269 113 7 72 297 333 594 2.75e-41 155
Msa0609880 AT4G12020.5 50.820 61 29 1 276 336 400 459 3.53e-12 68.9
Msa0609880 AT4G26440.1 66.667 102 34 0 242 343 337 438 4.33e-39 147
Msa0609880 AT4G26440.1 63.380 71 25 1 144 214 178 247 1.84e-23 102
Msa0609880 AT4G26440.1 56.667 60 25 1 277 336 178 236 9.78e-15 76.3
Msa0609880 AT4G26440.1 50.000 76 37 1 128 203 357 431 1.22e-13 72.8
Msa0609880 AT2G04880.1 53.509 114 49 3 233 344 263 374 2.19e-32 127
Msa0609880 AT2G04880.1 46.154 91 48 1 140 230 107 196 3.31e-18 86.7
Msa0609880 AT2G04880.1 54.688 64 28 1 275 338 109 171 1.08e-15 79.0
Msa0609880 AT2G04880.1 45.652 92 48 2 121 212 286 375 1.61e-15 78.2
Msa0609880 AT3G01080.3 38.983 236 103 10 1 204 38 264 1.21e-31 122
Msa0609880 AT3G01080.3 56.667 60 25 1 277 336 205 263 1.08e-14 74.7
Msa0609880 AT4G18170.1 64.474 76 27 0 262 337 157 232 1.83e-29 116
Msa0609880 AT4G18170.1 52.308 65 29 1 144 208 172 234 6.83e-14 72.4
Msa0609880 AT1G29860.1 64.000 75 27 0 264 338 123 197 2.39e-29 115
Msa0609880 AT1G29860.1 52.308 65 29 1 144 208 136 198 5.50e-14 72.0
Msa0609880 AT5G46350.1 61.039 77 30 0 263 339 169 245 2.17e-28 113
Msa0609880 AT5G46350.1 44.578 83 38 2 144 226 183 257 4.17e-13 70.1
Msa0609880 AT2G37260.3 48.092 131 55 2 221 349 222 341 2.97e-28 114
Msa0609880 AT2G37260.3 68.750 64 19 1 140 203 81 143 2.88e-23 100
Msa0609880 AT2G37260.3 57.377 61 25 1 278 338 86 145 1.24e-14 74.7
Msa0609880 AT2G37260.3 49.123 57 29 0 144 200 269 325 2.95e-11 64.7
Msa0609880 AT2G37260.2 48.092 131 55 2 221 349 220 339 3.02e-28 114
Msa0609880 AT2G37260.2 68.750 64 19 1 140 203 79 141 2.78e-23 100
Msa0609880 AT2G37260.2 57.377 61 25 1 278 338 84 143 1.28e-14 74.7
Msa0609880 AT2G37260.2 49.123 57 29 0 144 200 267 323 2.94e-11 64.7
Msa0609880 AT2G44745.1 52.688 93 43 1 250 342 118 209 3.71e-28 110
Msa0609880 AT2G44745.1 56.140 57 25 0 144 200 145 201 1.83e-14 72.4
Msa0609880 AT2G37260.1 48.092 131 55 2 221 349 302 421 7.01e-28 114
Msa0609880 AT2G37260.1 68.750 64 19 1 140 203 161 223 4.93e-23 100
Msa0609880 AT2G37260.1 57.377 61 25 1 278 338 166 225 1.48e-14 75.1
Msa0609880 AT2G37260.1 49.123 57 29 0 144 200 349 405 3.45e-11 64.7
Msa0609880 AT5G13080.1 52.381 84 40 0 264 347 54 137 2.44e-27 105
Msa0609880 AT5G13080.1 57.895 57 24 0 144 200 67 123 7.54e-16 74.3
Msa0609880 AT1G64000.1 60.526 76 30 0 258 333 95 170 3.28e-27 107
Msa0609880 AT1G64000.1 52.459 61 29 0 140 200 110 170 6.64e-14 70.5
Msa0609880 AT5G49520.1 64.384 73 26 0 264 336 208 280 3.91e-27 111
Msa0609880 AT5G49520.1 46.053 76 40 1 128 203 206 280 6.23e-15 76.3
Msa0609880 AT1G69310.4 58.974 78 32 0 256 333 126 203 4.81e-27 109
Msa0609880 AT1G69310.4 55.172 58 26 0 144 201 147 204 4.18e-16 78.6
Msa0609880 AT1G69310.2 58.974 78 32 0 256 333 126 203 4.81e-27 109
Msa0609880 AT1G69310.2 55.172 58 26 0 144 201 147 204 4.18e-16 78.6
Msa0609880 AT1G69310.1 58.974 78 32 0 256 333 126 203 4.81e-27 109
Msa0609880 AT1G69310.1 55.172 58 26 0 144 201 147 204 4.18e-16 78.6
Msa0609880 AT4G39410.1 59.211 76 31 0 258 333 204 279 6.72e-27 109
Msa0609880 AT4G39410.1 54.386 57 26 0 144 200 223 279 3.15e-14 73.2
Msa0609880 AT2G47260.1 63.014 73 27 0 264 336 161 233 7.29e-27 109
Msa0609880 AT2G47260.1 53.125 64 30 0 144 207 174 237 2.50e-15 77.0
Msa0609880 AT5G41570.1 60.526 76 30 0 258 333 79 154 2.00e-26 104
Msa0609880 AT5G41570.1 52.459 61 29 0 140 200 94 154 1.59e-13 68.9
Msa0609880 AT3G01970.1 54.762 84 38 0 264 347 52 135 4.76e-26 102
Msa0609880 AT3G01970.1 55.556 63 28 0 144 206 65 127 3.60e-15 72.8
Msa0609880 AT2G46130.1 56.579 76 33 0 258 333 11 86 2.19e-25 99.8
Msa0609880 AT2G46130.1 50.877 57 28 0 144 200 30 86 3.01e-13 66.2
Msa0609880 AT4G04450.2 44.915 118 59 3 248 362 169 283 4.55e-25 106
Msa0609880 AT4G04450.2 38.202 89 50 3 145 229 199 286 5.78e-11 64.3
Msa0609880 AT1G55600.1 61.728 81 31 0 258 338 288 368 5.02e-25 106
Msa0609880 AT1G55600.1 46.667 75 39 1 129 203 293 366 7.17e-12 67.0
Msa0609880 AT4G04450.1 44.915 118 59 3 248 362 263 377 1.22e-24 105
Msa0609880 AT5G26170.1 55.714 70 31 0 264 333 100 169 1.65e-24 99.4
Msa0609880 AT5G26170.1 50.877 57 28 0 144 200 113 169 1.22e-12 66.2
Msa0609880 AT3G62340.1 42.857 119 62 1 263 375 104 222 4.16e-24 100
Msa0609880 AT3G62340.1 55.000 60 27 0 144 203 118 177 1.14e-14 73.9
Msa0609880 AT2G21900.1 50.000 76 35 1 266 338 95 170 1.17e-22 95.1
Msa0609880 AT2G21900.1 47.826 69 36 0 135 203 100 168 1.03e-14 72.8
Msa0609880 AT5G15130.2 46.809 94 46 2 260 352 168 258 3.43e-22 98.6
Msa0609880 AT5G15130.1 46.809 94 46 2 260 352 210 300 3.63e-22 98.6
Msa0609880 AT1G69310.3 55.128 78 31 1 256 333 126 199 3.74e-22 95.5
Msa0609880 AT1G69310.3 50.000 58 25 1 144 201 147 200 1.65e-11 64.7
Msa0609880 AT1G68150.1 45.000 100 54 1 262 360 220 319 7.35e-22 96.3
Msa0609880 AT4G22070.4 45.455 88 47 1 250 336 270 357 1.27e-21 97.1
Msa0609880 AT4G22070.3 45.455 88 47 1 250 336 270 357 1.27e-21 97.1
Msa0609880 AT4G22070.2 45.455 88 47 1 250 336 270 357 1.27e-21 97.1
Msa0609880 AT4G22070.1 45.455 88 47 1 250 336 270 357 1.27e-21 97.1
Msa0609880 AT5G64810.1 50.704 71 35 0 264 334 97 167 3.13e-21 90.9
Msa0609880 AT5G64810.1 48.276 58 30 0 144 201 110 167 8.65e-12 64.3
Msa0609880 AT1G62300.1 50.633 79 38 1 259 336 294 372 3.16e-21 95.9
Msa0609880 AT2G46130.2 52.632 76 32 1 258 333 11 82 1.30e-20 86.7
Msa0609880 AT4G31550.2 46.535 101 42 3 242 341 221 310 7.00e-20 90.1
Msa0609880 AT4G31550.1 50.588 85 38 2 258 341 230 311 8.20e-20 89.7
Msa0609880 AT4G01720.1 52.632 76 35 1 262 336 224 299 8.44e-20 91.3
Msa0609880 AT1G18860.1 41.837 98 56 1 240 336 202 299 2.33e-19 90.1
Msa0609880 AT2G34830.1 41.584 101 52 2 240 339 184 278 9.38e-19 87.8
Msa0609880 AT2G34830.2 41.584 101 52 2 240 339 193 287 9.85e-19 87.8
Msa0609880 AT4G23550.1 44.944 89 45 2 264 351 127 212 1.05e-18 86.3
Msa0609880 AT4G23550.1 48.333 60 30 1 145 203 141 200 2.43e-12 67.8
Msa0609880 AT4G31800.2 52.113 71 32 2 270 338 103 173 1.34e-18 84.7
Msa0609880 AT2G25000.2 51.429 70 32 2 271 338 96 165 1.39e-18 84.3
Msa0609880 AT2G25000.2 47.619 63 32 1 145 206 104 166 1.07e-11 64.7
Msa0609880 AT2G25000.4 51.429 70 32 2 271 338 96 165 1.39e-18 84.3
Msa0609880 AT2G25000.4 47.619 63 32 1 145 206 104 166 1.07e-11 64.7
Msa0609880 AT2G30590.1 48.718 78 39 1 257 333 293 370 1.43e-18 87.0
Msa0609880 AT4G31800.1 52.113 71 32 2 270 338 168 238 2.43e-18 85.1
Msa0609880 AT1G30650.1 41.584 101 52 2 240 339 186 280 2.47e-18 86.7
Msa0609880 AT2G25000.3 51.429 70 32 2 271 338 118 187 2.79e-18 84.0
Msa0609880 AT2G25000.3 47.619 63 32 1 145 206 126 188 1.42e-11 64.7
Msa0609880 AT2G25000.1 51.429 70 32 2 271 338 139 208 3.96e-18 84.0
Msa0609880 AT2G25000.1 47.619 63 32 1 145 206 147 209 1.89e-11 64.7
Msa0609880 AT2G23320.1 48.101 79 37 2 258 335 224 299 5.37e-18 84.3
Msa0609880 AT1G29280.1 41.584 101 52 2 237 336 40 134 5.82e-18 83.2
Msa0609880 AT1G80840.1 51.562 64 30 1 275 337 144 207 6.25e-18 84.0
Msa0609880 AT1G80840.1 50.725 69 31 2 145 212 147 213 1.79e-13 70.9
Msa0609880 AT3G58710.2 41.284 109 55 3 242 347 41 143 2.02e-17 82.0
Msa0609880 AT2G24570.1 50.649 77 34 2 258 333 227 300 2.35e-17 82.4
Msa0609880 AT5G28650.1 40.777 103 49 3 242 343 238 329 3.41e-17 82.4
Msa0609880 AT4G01250.1 55.556 63 27 1 275 336 126 188 3.78e-17 81.6
Msa0609880 AT4G01250.1 44.118 68 37 1 137 203 121 188 5.29e-12 66.6
Msa0609880 AT3G58710.1 40.179 112 58 3 239 347 39 144 4.35e-17 80.9
Msa0609880 AT4G24240.1 42.105 95 43 3 242 335 257 340 4.62e-17 82.0
Msa0609880 AT3G04670.1 40.777 103 49 3 242 343 238 329 6.03e-17 81.6
Msa0609880 AT5G43290.1 55.932 59 26 0 275 333 112 170 1.09e-16 80.1
Msa0609880 AT5G43290.1 40.625 96 47 1 144 229 114 209 7.96e-14 71.6
Msa0609880 AT1G69810.2 40.000 95 53 3 260 352 128 220 2.31e-15 77.0
Msa0609880 AT5G52830.1 49.254 67 33 1 274 339 162 228 2.33e-15 77.0
Msa0609880 AT5G52830.1 44.118 68 37 1 137 203 158 225 6.74e-13 69.7
Msa0609880 AT1G69810.1 40.000 95 53 3 260 352 186 278 3.16e-15 77.0
Msa0609880 AT5G45050.1 52.381 63 29 1 278 339 1181 1243 3.46e-15 78.2
Msa0609880 AT5G45050.2 52.381 63 29 1 278 339 1153 1215 3.56e-15 78.2
Msa0609880 AT5G45050.4 52.381 63 29 1 278 339 1042 1104 3.65e-15 77.8
Msa0609880 AT3G56400.1 34.247 146 84 4 210 343 48 193 8.93e-15 74.7
Msa0609880 AT4G23810.1 37.634 93 48 2 109 198 130 215 3.05e-13 70.5
Msa0609880 AT1G66560.1 50.000 58 26 1 277 331 103 160 3.54e-13 69.3
Msa0609880 AT5G45260.1 43.529 85 40 4 127 207 1192 1272 1.52e-12 69.7
Msa0609880 AT5G24110.1 46.032 63 31 1 139 198 108 170 2.29e-12 67.8
Msa0609880 AT4G11070.2 33.684 95 53 2 107 198 79 166 9.63e-12 65.5
Msa0609880 AT4G11070.1 33.684 95 53 2 107 198 111 198 1.44e-11 65.5
Msa0609880 AT2G46400.1 37.634 93 52 2 255 341 82 174 1.82e-11 64.7
Msa0609880 AT2G46400.1 41.096 73 40 1 144 213 104 176 4.97e-11 63.5
Msa0609880 AT2G40740.1 43.750 64 33 1 138 198 167 230 3.32e-11 63.9
Msa0609880 AT2G40740.3 43.750 64 33 1 138 198 176 239 4.58e-11 63.5
Msa0609880 AT1G66550.2 45.614 57 28 1 278 331 104 160 8.25e-11 62.4
Msa0609880 AT1G66550.1 45.614 57 28 1 278 331 109 165 9.57e-11 62.4

Find 123 sgRNAs with CRISPR-Local

Find 205 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTCACAAGTAATCTTTA+AGG 0.175037 4_2:-57468296 Msa0609880:three_prime_UTR
ATACCAGAAATTGGACTTAT+AGG 0.211823 4_2:+57468225 None:intergenic
GGATATAGATGGCGCAAATA+TGG 0.214842 4_2:-57469124 Msa0609880:CDS
ATATGTAATCACCTTGGATA+TGG 0.279577 4_2:+57469079 None:intergenic
TATGTTGTCAATACAGCTTT+AGG 0.290861 4_2:+57468541 None:intergenic
ATACCACTTGTTGGGGAGTT+TGG 0.294288 4_2:+57468055 None:intergenic
GACATTTAATATGTAATTGA+TGG 0.297151 4_2:-57471635 Msa0609880:five_prime_UTR
AGGCCTATAAGTCCAATTTC+TGG 0.306456 4_2:-57468228 Msa0609880:three_prime_UTR
TGGTGGCATGTTTGGCTTCA+TGG 0.315986 4_2:-57467988 Msa0609880:three_prime_UTR
TATGTGAAAGGGCTGGATTC+AGG 0.322005 4_2:+57469209 None:intergenic
GTAACTGCAATTATTTATAA+AGG 0.324911 4_2:-57469698 Msa0609880:CDS
GGAGGAGGAGGAAGAGGTGG+TGG 0.331770 4_2:-57471143 Msa0609880:CDS
GTGGAGCATGGAGGAGGAGG+AGG 0.338095 4_2:-57471158 Msa0609880:CDS
GAAGAATACTCAACAGAGTT+TGG 0.345418 4_2:+57469911 None:intergenic
AGAAAATGTATTGATCTCTT+AGG 0.353852 4_2:-57468089 Msa0609880:three_prime_UTR
GGTACTAATGATGCAGAAAA+TGG 0.358891 4_2:+57469998 None:intergenic
GAGCATGGAGGAGGAGGAGG+AGG 0.360875 4_2:-57471155 Msa0609880:CDS
ACTTTGCTTTCCAACTTGTT+TGG 0.361900 4_2:-57471236 Msa0609880:CDS
CGATGATTGCAAGTCTTTCT+CGG 0.373114 4_2:-57471207 Msa0609880:CDS
AAGGGCTGGATTCAGGAGTT+TGG 0.376159 4_2:+57469216 None:intergenic
GGAAATGGAGAGTGGCCTTC+AGG 0.377893 4_2:-57471284 Msa0609880:CDS
AGCTAAGCATACCACTTGTT+GGG 0.385170 4_2:+57468047 None:intergenic
GGATACAACTGGAGGAAGTA+TGG 0.398456 4_2:-57469827 Msa0609880:CDS
TGAATGGTTGGAGGTGGAAA+TGG 0.401101 4_2:-57471299 Msa0609880:CDS
AACAAGTGATGTGGATCTCT+TGG 0.410616 4_2:-57469152 Msa0609880:CDS
ATGATGAATGGTGGCATGTT+TGG 0.417506 4_2:-57467996 Msa0609880:three_prime_UTR
AAGCTAAGCATACCACTTGT+TGG 0.420828 4_2:+57468046 None:intergenic
AAGTTATATACGTGAAAGAT+AGG 0.420840 4_2:-57471524 Msa0609880:five_prime_UTR
GATGTGGAGCATGGAGGAGG+AGG 0.427310 4_2:-57471161 Msa0609880:CDS
TCAATAAAGTTGTGAATGGT+TGG 0.429419 4_2:-57471311 Msa0609880:exon
ATGTTATTGAGTGTTATTGA+TGG 0.430666 4_2:+57469950 None:intergenic
GGAGGATTATGAGTGAATTC+AGG 0.431837 4_2:-57467967 Msa0609880:three_prime_UTR
ATAGGCCTTGGTCAAAACTT+TGG 0.438403 4_2:+57468243 None:intergenic
GATATAGATGGCGCAAATAT+GGG 0.438866 4_2:-57469123 Msa0609880:CDS
CAACTCCGGGTTGCAATGTT+CGG 0.442776 4_2:-57468591 Msa0609880:CDS
GAAAGATAGGAGAAGATTGC+AGG 0.443121 4_2:-57471511 Msa0609880:five_prime_UTR
TATTGATCTCTTAGGAGTAC+TGG 0.453258 4_2:-57468081 Msa0609880:three_prime_UTR
CGCCGGCGACACGTTGGATG+TGG 0.461301 4_2:-57471177 Msa0609880:CDS
CAGAAAATGGATGTTCAGAT+TGG 0.461752 4_2:+57470011 None:intergenic
GAAATTGGACTTATAGGCCT+TGG 0.463448 4_2:+57468231 None:intergenic
GGAGGAGGAAGAGGTGGTGG+TGG 0.463548 4_2:-57471140 Msa0609880:CDS
GGAGAGTGGCCTTCAGGTGG+GGG 0.472624 4_2:-57471278 Msa0609880:CDS
TGAACATGGCCAACGGAGAC+AGG 0.476956 4_2:+57471117 None:intergenic
GAAAGAGTGAGAGTGTATCT+AGG 0.486124 4_2:-57468020 Msa0609880:three_prime_UTR
TTGTTGTTTGTGAGCTTGCT+AGG 0.486292 4_2:+57469650 None:intergenic
CATGTTCACTTCTCCACCTC+AGG 0.493399 4_2:-57471102 Msa0609880:intron
TTGTGAGCTTGCTAGGACGT+GGG 0.495694 4_2:+57469657 None:intergenic
TATGTAATCACCTTGGATAT+GGG 0.509899 4_2:+57469080 None:intergenic
CTCCACATCCAACGTGTCGC+CGG 0.513155 4_2:+57471175 None:intergenic
CCTTACCTTCTCTTGAGACC+AGG 0.513180 4_2:+57469548 None:intergenic
ATAATCAATAAAGTTGTGAA+TGG 0.514219 4_2:-57471315 Msa0609880:exon
GTTGAACGCGATCCTGTAGA+TGG 0.515499 4_2:-57469725 Msa0609880:CDS
GATGTGCCACTGCTGAAGGC+TGG 0.517301 4_2:+57468392 None:intergenic
ATGGAGAGTGGCCTTCAGGT+GGG 0.518947 4_2:-57471280 Msa0609880:CDS
CTTAGATGTGCCACTGCTGA+AGG 0.520698 4_2:+57468388 None:intergenic
GTGCACTTGTAATAACTTCG+AGG 0.523109 4_2:+57469776 None:intergenic
TCTTGGAGGATGGATATAGA+TGG 0.523927 4_2:-57469135 Msa0609880:CDS
ATGCACTATTATTGCTAGCA+AGG 0.524276 4_2:+57468467 None:intergenic
GCTGTATTGACAACATATGA+AGG 0.524886 4_2:-57468535 Msa0609880:CDS
ACAAGTGACAGTGAGGAAGA+AGG 0.529857 4_2:-57469599 Msa0609880:CDS
GAAGATTGCAGGCATAGCAT+AGG 0.533234 4_2:-57471500 Msa0609880:five_prime_UTR
CTATTACAAATGCACAACTC+CGG 0.535365 4_2:-57468605 Msa0609880:CDS
TGACTGTTAGTCTTAGCTGC+TGG 0.535682 4_2:+57468493 None:intergenic
TTGAGACAGTCCTATGTGAA+AGG 0.535910 4_2:+57469197 None:intergenic
ATCGTTGTCACCAAACAAGT+TGG 0.536702 4_2:+57471226 None:intergenic
GAGAGTGGCCTTCAGGTGGG+GGG 0.537568 4_2:-57471277 Msa0609880:CDS
TATTACAAATGCACAACTCC+GGG 0.539125 4_2:-57468604 Msa0609880:CDS
GAAAGCAAAGTCATGGGACC+TGG 0.539402 4_2:+57471248 None:intergenic
CAAGTTGGAAAGCAAAGTCA+TGG 0.540093 4_2:+57471241 None:intergenic
CTAATGACGACGGATACAAC+TGG 0.541447 4_2:-57469838 Msa0609880:CDS
AATGGAGAGTGGCCTTCAGG+TGG 0.546609 4_2:-57471281 Msa0609880:CDS
TTTGTGAGCTTGCTAGGACG+TGG 0.549051 4_2:+57469656 None:intergenic
GCAGTTACATGACCATCTAC+AGG 0.555080 4_2:+57469713 None:intergenic
TGGAGAGTGGCCTTCAGGTG+GGG 0.556179 4_2:-57471279 Msa0609880:CDS
GCTCCTCGCCGGCGACACGT+TGG 0.556619 4_2:-57471183 Msa0609880:CDS
TGAGACAGTCCTATGTGAAA+GGG 0.556933 4_2:+57469198 None:intergenic
TTGGATGTGGAGCATGGAGG+AGG 0.558763 4_2:-57471164 Msa0609880:CDS
ACAGTCCTATGTGAAAGGGC+TGG 0.559923 4_2:+57469202 None:intergenic
TTGAAGTATATTACCTGAGG+TGG 0.561057 4_2:+57471089 None:intergenic
TCTTTCTCGGAGCTCCTCGC+CGG 0.563489 4_2:-57471194 Msa0609880:CDS
TTGTGTCAATGAGGTACTGT+TGG 0.566128 4_2:+57469976 None:intergenic
AGATGCAGAATTTCAACAGA+AGG 0.567059 4_2:-57468423 Msa0609880:CDS
GATGCAGAATTTCAACAGAA+GGG 0.571983 4_2:-57468422 Msa0609880:CDS
AGTGGCACATCTAAGATTGA+AGG 0.580831 4_2:-57468380 Msa0609880:CDS
GCATGTTGAGAGGGTTTCAA+CGG 0.585716 4_2:-57468566 Msa0609880:CDS
ATGAACCTGGTCTCAAGAGA+AGG 0.587168 4_2:-57469553 Msa0609880:intron
GACACGTTGGATGTGGAGCA+TGG 0.587276 4_2:-57471170 Msa0609880:CDS
TGGTGGTGGCCTGTCTCCGT+TGG 0.588670 4_2:-57471126 Msa0609880:CDS
TTCTTCTGTGAATGTTGACA+AGG 0.592690 4_2:-57469861 Msa0609880:CDS
TGTTCGGAAGCATGTTGAGA+GGG 0.594276 4_2:-57468575 Msa0609880:CDS
AAGTTGTGAATGGTTGGAGG+TGG 0.597067 4_2:-57471305 Msa0609880:exon
AAGTGATGTGGATCTCTTGG+AGG 0.597649 4_2:-57469149 Msa0609880:CDS
GTGTATCTAGGTATGATGAA+TGG 0.599996 4_2:-57468008 Msa0609880:three_prime_UTR
TTGGACTTGAGCATTTGAGT+AGG 0.606080 4_2:+57470030 None:intergenic
TCAACACCAGCCTTCAGCAG+TGG 0.608907 4_2:-57468398 Msa0609880:CDS
TCTTTCATCTATCTAAAGCG+TGG 0.612176 4_2:-57471463 Msa0609880:five_prime_UTR
TGAATCCAGCCCTTTCACAT+AGG 0.612428 4_2:-57469207 Msa0609880:CDS
ACTGAAGTAGATTATGAACC+TGG 0.614019 4_2:-57469566 Msa0609880:CDS
ATGTTCGGAAGCATGTTGAG+AGG 0.614164 4_2:-57468576 Msa0609880:CDS
CTGAGGTGGAGAAGTGAACA+TGG 0.615388 4_2:+57471103 None:intergenic
GCTAAGCATACCACTTGTTG+GGG 0.618480 4_2:+57468048 None:intergenic
CATCCAACGTGTCGCCGGCG+AGG 0.621069 4_2:+57471180 None:intergenic
TCAAAGGCAACCCATATCCA+AGG 0.626448 4_2:-57469090 Msa0609880:intron
TATGGACAGAAACAAGTGAA+AGG 0.627695 4_2:-57469809 Msa0609880:CDS
GATGTGGATCTCTTGGAGGA+TGG 0.628338 4_2:-57469145 Msa0609880:CDS
AAGTTGGAAAGCAAAGTCAT+GGG 0.630381 4_2:+57471242 None:intergenic
ATGCAGAATTTCAACAGAAG+GGG 0.631709 4_2:-57468421 Msa0609880:CDS
TGCTTCCGAACATTGCAACC+CGG 0.632799 4_2:+57468586 None:intergenic
ATAAAGTTGTGAATGGTTGG+AGG 0.633267 4_2:-57471308 Msa0609880:exon
TATGGGCAGAAAGTTGTCAA+AGG 0.640343 4_2:-57469106 Msa0609880:CDS
TGTGTCAATGAGGTACTGTT+GGG 0.640910 4_2:+57469977 None:intergenic
TTATAGATCATATGTGTGAG+TGG 0.642184 4_2:-57468189 Msa0609880:three_prime_UTR
GTCAGGAACAAGTGACAGTG+AGG 0.650399 4_2:-57469606 Msa0609880:CDS
GGAGAAGTGAACATGGCCAA+CGG 0.651441 4_2:+57471110 None:intergenic
TGATGGAACTTGTGTCAATG+AGG 0.653592 4_2:+57469967 None:intergenic
TCACCAAACTCCCCAACAAG+TGG 0.656522 4_2:-57468058 Msa0609880:three_prime_UTR
TGTGCAAACAACAAGTGATG+TGG 0.666996 4_2:-57469161 Msa0609880:CDS
TTGGAGGTGGAAATGGAGAG+TGG 0.686540 4_2:-57471292 Msa0609880:CDS
TGGCATGTTTGGCTTCATGG+AGG 0.697539 4_2:-57467985 Msa0609880:three_prime_UTR
GTTGACAAGGCTAATGACGA+CGG 0.705023 4_2:-57469848 Msa0609880:CDS
TATCTAGGTATGATGAATGG+TGG 0.712518 4_2:-57468005 Msa0609880:three_prime_UTR
ATGACGACGGATACAACTGG+AGG 0.731932 4_2:-57469835 Msa0609880:CDS
ACGTTGGATGTGGAGCATGG+AGG 0.754990 4_2:-57471167 Msa0609880:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTGTAAAAAAAAACATA+TGG - chr4_2:57469079-57469098 Msa0609880:intron 10.0%
!!! AATACTTAAGTAATTTTTTT+TGG + chr4_2:57469217-57469236 None:intergenic 10.0%
!!! TTTTAAAAAAATTACACTAA+CGG + chr4_2:57470203-57470222 None:intergenic 10.0%
!!! ATCTTTATAGTTTTATTTTT+TGG - chr4_2:57471547-57471566 Msa0609880:five_prime_UTR 10.0%
!!! TAATTAAAAAGTATATTGGT+TGG - chr4_2:57468822-57468841 Msa0609880:intron 15.0%
!!! ATATGTTTATTCCTTTTTTT+AGG + chr4_2:57469055-57469074 None:intergenic 15.0%
!!! AAAAAACATATGGATTTTAA+TGG - chr4_2:57469089-57469108 Msa0609880:intron 15.0%
!!! AAATTTTGTCTATAAAGTAT+CGG - chr4_2:57469148-57469167 Msa0609880:CDS 15.0%
!!! TTTCATATTTTATACAAGAT+TGG - chr4_2:57471328-57471347 Msa0609880:five_prime_UTR 15.0%
!! GACATTTAATATGTAATTGA+TGG - chr4_2:57468024-57468043 Msa0609880:three_prime_UTR 20.0%
!!! GACTTTTTTTTGTACAAATT+AGG - chr4_2:57468066-57468085 Msa0609880:three_prime_UTR 20.0%
!!! ACTTTTAAGACTTATAGATA+AGG - chr4_2:57468091-57468110 Msa0609880:three_prime_UTR 20.0%
!!! CTTTTAAGACTTATAGATAA+GGG - chr4_2:57468092-57468111 Msa0609880:three_prime_UTR 20.0%
!!! TTTTAAGACTTATAGATAAG+GGG - chr4_2:57468093-57468112 Msa0609880:three_prime_UTR 20.0%
!! ATAATCAATAAAGTTGTGAA+TGG - chr4_2:57468344-57468363 Msa0609880:three_prime_UTR 20.0%
!! GGATAAATTCAAAAATTCTT+AGG + chr4_2:57469196-57469215 None:intergenic 20.0%
!! GTAACTGCAATTATTTATAA+AGG - chr4_2:57469961-57469980 Msa0609880:CDS 20.0%
!! ATACATCTACTTAATTATGT+AGG - chr4_2:57470603-57470622 Msa0609880:intron 20.0%
!! TACATCTACTTAATTATGTA+GGG - chr4_2:57470604-57470623 Msa0609880:intron 20.0%
! AAGTTATATACGTGAAAGAT+AGG - chr4_2:57468135-57468154 Msa0609880:three_prime_UTR 25.0%
!! TTTAATTTCATCGAGCTTAA+GGG + chr4_2:57468674-57468693 None:intergenic 25.0%
!!! TTTTAATTTCATCGAGCTTA+AGG + chr4_2:57468675-57468694 None:intergenic 25.0%
! CTATATTTAGAGAATGAGAT+AGG + chr4_2:57468705-57468724 None:intergenic 25.0%
! CTATCTCATTCTCTAAATAT+AGG - chr4_2:57468703-57468722 Msa0609880:intron 25.0%
!!! TACAACTACGAATTTTTTTC+AGG + chr4_2:57468789-57468808 None:intergenic 25.0%
! AAAATGAGTGATATCTTTCT+TGG + chr4_2:57468867-57468886 None:intergenic 25.0%
! ATAAACGTTCTCCTAAAAAA+AGG - chr4_2:57469041-57469060 Msa0609880:intron 25.0%
! TTCAATCTTCTTACAAAAGA+AGG - chr4_2:57469283-57469302 Msa0609880:intron 25.0%
! CTACTATATATGCTTCAATT+AGG - chr4_2:57469360-57469379 Msa0609880:intron 25.0%
! TATATGCTTCAATTAGGATA+AGG - chr4_2:57469366-57469385 Msa0609880:intron 25.0%
! TGGAATTGGAATATTAAACA+AGG - chr4_2:57469434-57469453 Msa0609880:intron 25.0%
! TAATTTAATCCAAACTTCCA+AGG + chr4_2:57469489-57469508 None:intergenic 25.0%
! AAATTCAACCGCTATTTATT+TGG - chr4_2:57469526-57469545 Msa0609880:intron 25.0%
!! ATGTTATTGAGTGTTATTGA+TGG + chr4_2:57469712-57469731 None:intergenic 25.0%
! AATCATAATTCATAGCTGTT+TGG + chr4_2:57470314-57470333 None:intergenic 25.0%
!!! TAGTTTTATGTGATGATGTT+AGG - chr4_2:57470391-57470410 Msa0609880:intron 25.0%
! ATGTATATATGTAATCACCT+TGG + chr4_2:57470589-57470608 None:intergenic 25.0%
! AAATTAGTGATACACCTTTA+GGG + chr4_2:57470644-57470663 None:intergenic 25.0%
! TAAATTAGTGATACACCTTT+AGG + chr4_2:57470645-57470664 None:intergenic 25.0%
!!! AAATTTTGTGTCTGAAATTG+CGG - chr4_2:57470688-57470707 Msa0609880:intron 25.0%
! GACTAAACTCTATAATTTCA+AGG - chr4_2:57470819-57470838 Msa0609880:intron 25.0%
!!! CTTTTTTGTTTTTGAATGTG+AGG - chr4_2:57471393-57471412 Msa0609880:five_prime_UTR 25.0%
!! AGAAAATGTATTGATCTCTT+AGG - chr4_2:57471570-57471589 Msa0609880:five_prime_UTR 25.0%
TCAATAAAGTTGTGAATGGT+TGG - chr4_2:57468348-57468367 Msa0609880:exon 30.0%
TTAATTTCATCGAGCTTAAG+GGG + chr4_2:57468673-57468692 None:intergenic 30.0%
AGTATTTATTGCTCACGAAA+AGG - chr4_2:57468900-57468919 Msa0609880:intron 30.0%
! TTCTTAGGTATCTTTGAGTT+TGG + chr4_2:57469181-57469200 None:intergenic 30.0%
! CTTGATCTCAAGTTTCATTT+TGG - chr4_2:57469308-57469327 Msa0609880:intron 30.0%
! CACATTTGATTAGCTAAGTT+AGG - chr4_2:57469393-57469412 Msa0609880:intron 30.0%
TTAACCAGCCAAATAAATAG+CGG + chr4_2:57469537-57469556 None:intergenic 30.0%
! GTTGTTTGCACAATGATTTT+AGG + chr4_2:57470490-57470509 None:intergenic 30.0%
TATGTAATCACCTTGGATAT+GGG + chr4_2:57470582-57470601 None:intergenic 30.0%
ATATGTAATCACCTTGGATA+TGG + chr4_2:57470583-57470602 None:intergenic 30.0%
!! AATTTTGTGTCTGAAATTGC+GGG - chr4_2:57470689-57470708 Msa0609880:intron 30.0%
AATTTCAAGGTCAAGAATGT+TGG - chr4_2:57470832-57470851 Msa0609880:intron 30.0%
!! TCTAATTGTTGATGACCATT+AGG - chr4_2:57470860-57470879 Msa0609880:intron 30.0%
ATGTAACTAAGCATTTCTGA+GGG + chr4_2:57470918-57470937 None:intergenic 30.0%
AATGTAACTAAGCATTTCTG+AGG + chr4_2:57470919-57470938 None:intergenic 30.0%
!!! TCACTATCTTTTCTAGAACA+TGG + chr4_2:57471006-57471025 None:intergenic 30.0%
GCATTCTTGTATCATAATGT+AGG - chr4_2:57471029-57471048 Msa0609880:intron 30.0%
TATGTTGTCAATACAGCTTT+AGG + chr4_2:57471121-57471140 None:intergenic 30.0%
CAACTCACAAGTAATCTTTA+AGG - chr4_2:57471363-57471382 Msa0609880:five_prime_UTR 30.0%
ATACCAGAAATTGGACTTAT+AGG + chr4_2:57471437-57471456 None:intergenic 30.0%
!! GCTTTTTCTATACCAGAAAT+TGG + chr4_2:57471446-57471465 None:intergenic 30.0%
TTATAGATCATATGTGTGAG+TGG - chr4_2:57471470-57471489 Msa0609880:five_prime_UTR 30.0%
! TCTTTCATCTATCTAAAGCG+TGG - chr4_2:57468196-57468215 Msa0609880:three_prime_UTR 35.0%
ATAAAGTTGTGAATGGTTGG+AGG - chr4_2:57468351-57468370 Msa0609880:exon 35.0%
AAGTTGGAAAGCAAAGTCAT+GGG + chr4_2:57468420-57468439 None:intergenic 35.0%
! ACTTTGCTTTCCAACTTGTT+TGG - chr4_2:57468423-57468442 Msa0609880:CDS 35.0%
TTGAAGTATATTACCTGAGG+TGG + chr4_2:57468573-57468592 None:intergenic 35.0%
GAGTTGAAGTATATTACCTG+AGG + chr4_2:57468576-57468595 None:intergenic 35.0%
ATTTATTGCTCACGAAAAGG+AGG - chr4_2:57468903-57468922 Msa0609880:intron 35.0%
! TAGGTATCTTTGAGTTTGGT+CGG + chr4_2:57469177-57469196 None:intergenic 35.0%
CTAAATGATCAAGTGCTTTC+TGG - chr4_2:57469334-57469353 Msa0609880:intron 35.0%
ACTTCACATCTGATTGGAAT+TGG - chr4_2:57469420-57469439 Msa0609880:intron 35.0%
CACGAAATCAAAAGATACCT+TGG - chr4_2:57469469-57469488 Msa0609880:intron 35.0%
CAAAAGATACCTTGGAAGTT+TGG - chr4_2:57469477-57469496 Msa0609880:intron 35.0%
CAGAAAATGGATGTTCAGAT+TGG + chr4_2:57469651-57469670 None:intergenic 35.0%
GGTACTAATGATGCAGAAAA+TGG + chr4_2:57469664-57469683 None:intergenic 35.0%
GAAGAATACTCAACAGAGTT+TGG + chr4_2:57469751-57469770 None:intergenic 35.0%
TTCTTCTGTGAATGTTGACA+AGG - chr4_2:57469798-57469817 Msa0609880:CDS 35.0%
TATGGACAGAAACAAGTGAA+AGG - chr4_2:57469850-57469869 Msa0609880:CDS 35.0%
ACTGAAGTAGATTATGAACC+TGG - chr4_2:57470093-57470112 Msa0609880:intron 35.0%
GATATAGATGGCGCAAATAT+GGG - chr4_2:57470536-57470555 Msa0609880:intron 35.0%
TCGAACAATTTAGTCCCTAA+AGG - chr4_2:57470627-57470646 Msa0609880:intron 35.0%
TAACATTAGTCCACACATTC+AGG - chr4_2:57470785-57470804 Msa0609880:intron 35.0%
CTAAAATTGTCCTGAATGTG+TGG + chr4_2:57470798-57470817 None:intergenic 35.0%
GATCTAGTAGACAATCCTAA+TGG + chr4_2:57470878-57470897 None:intergenic 35.0%
CTATTACAAATGCACAACTC+CGG - chr4_2:57471054-57471073 Msa0609880:intron 35.0%
TATTACAAATGCACAACTCC+GGG - chr4_2:57471055-57471074 Msa0609880:intron 35.0%
! GCTGTATTGACAACATATGA+AGG - chr4_2:57471124-57471143 Msa0609880:CDS 35.0%
ATGCACTATTATTGCTAGCA+AGG + chr4_2:57471195-57471214 None:intergenic 35.0%
AGATGCAGAATTTCAACAGA+AGG - chr4_2:57471236-57471255 Msa0609880:CDS 35.0%
GATGCAGAATTTCAACAGAA+GGG - chr4_2:57471237-57471256 Msa0609880:CDS 35.0%
ATGCAGAATTTCAACAGAAG+GGG - chr4_2:57471238-57471257 Msa0609880:CDS 35.0%
! TATTGATCTCTTAGGAGTAC+TGG - chr4_2:57471578-57471597 Msa0609880:five_prime_UTR 35.0%
GTGTATCTAGGTATGATGAA+TGG - chr4_2:57471651-57471670 Msa0609880:five_prime_UTR 35.0%
TATCTAGGTATGATGAATGG+TGG - chr4_2:57471654-57471673 Msa0609880:five_prime_UTR 35.0%
GAAAGATAGGAGAAGATTGC+AGG - chr4_2:57468148-57468167 Msa0609880:three_prime_UTR 40.0%
! CAAGTTGGAAAGCAAAGTCA+TGG + chr4_2:57468421-57468440 None:intergenic 40.0%
ATCGTTGTCACCAAACAAGT+TGG + chr4_2:57468436-57468455 None:intergenic 40.0%
CGATGATTGCAAGTCTTTCT+CGG - chr4_2:57468452-57468471 Msa0609880:CDS 40.0%
CTTCCATAGAGTCAAGTCAA+CGG - chr4_2:57468632-57468651 Msa0609880:intron 40.0%
!! TTACCGTTGACTTGACTCTA+TGG + chr4_2:57468638-57468657 None:intergenic 40.0%
GGAGTTACTTCACATCTGAT+TGG - chr4_2:57469414-57469433 Msa0609880:intron 40.0%
TCAACCGCTATTTATTTGGC+TGG - chr4_2:57469530-57469549 Msa0609880:intron 40.0%
TTGGACTTGAGCATTTGAGT+AGG + chr4_2:57469632-57469651 None:intergenic 40.0%
!! TGTGTCAATGAGGTACTGTT+GGG + chr4_2:57469685-57469704 None:intergenic 40.0%
!! TTGTGTCAATGAGGTACTGT+TGG + chr4_2:57469686-57469705 None:intergenic 40.0%
TGATGGAACTTGTGTCAATG+AGG + chr4_2:57469695-57469714 None:intergenic 40.0%
GTGCACTTGTAATAACTTCG+AGG + chr4_2:57469886-57469905 None:intergenic 40.0%
! TTTTTCGTCACAAGACAGCT+TGG + chr4_2:57469913-57469932 None:intergenic 40.0%
!! TTGTTGTTTGTGAGCTTGCT+AGG + chr4_2:57470012-57470031 None:intergenic 40.0%
TGAGACAGTCCTATGTGAAA+GGG + chr4_2:57470464-57470483 None:intergenic 40.0%
TTGAGACAGTCCTATGTGAA+AGG + chr4_2:57470465-57470484 None:intergenic 40.0%
TGTGCAAACAACAAGTGATG+TGG - chr4_2:57470498-57470517 Msa0609880:intron 40.0%
AACAAGTGATGTGGATCTCT+TGG - chr4_2:57470507-57470526 Msa0609880:intron 40.0%
TCTTGGAGGATGGATATAGA+TGG - chr4_2:57470524-57470543 Msa0609880:intron 40.0%
GGATATAGATGGCGCAAATA+TGG - chr4_2:57470535-57470554 Msa0609880:intron 40.0%
TATGGGCAGAAAGTTGTCAA+AGG - chr4_2:57470553-57470572 Msa0609880:intron 40.0%
! AGTGGCACATCTAAGATTGA+AGG - chr4_2:57471279-57471298 Msa0609880:CDS 40.0%
ATAGGCCTTGGTCAAAACTT+TGG + chr4_2:57471419-57471438 None:intergenic 40.0%
GAAATTGGACTTATAGGCCT+TGG + chr4_2:57471431-57471450 None:intergenic 40.0%
AGGCCTATAAGTCCAATTTC+TGG - chr4_2:57471431-57471450 Msa0609880:five_prime_UTR 40.0%
AGCTAAGCATACCACTTGTT+GGG + chr4_2:57471615-57471634 None:intergenic 40.0%
AAGCTAAGCATACCACTTGT+TGG + chr4_2:57471616-57471635 None:intergenic 40.0%
! GAAAGAGTGAGAGTGTATCT+AGG - chr4_2:57471639-57471658 Msa0609880:five_prime_UTR 40.0%
ATGATGAATGGTGGCATGTT+TGG - chr4_2:57471663-57471682 Msa0609880:five_prime_UTR 40.0%
GGAGGATTATGAGTGAATTC+AGG - chr4_2:57471692-57471711 Msa0609880:five_prime_UTR 40.0%
GAAGATTGCAGGCATAGCAT+AGG - chr4_2:57468159-57468178 Msa0609880:three_prime_UTR 45.0%
AAGTTGTGAATGGTTGGAGG+TGG - chr4_2:57468354-57468373 Msa0609880:exon 45.0%
TGAATGGTTGGAGGTGGAAA+TGG - chr4_2:57468360-57468379 Msa0609880:exon 45.0%
!! TGCTTGCTGTTGGGAGAATA+AGG + chr4_2:57469599-57469618 None:intergenic 45.0%
!! TTGTGCTAGTGCTTGCTGTT+GGG + chr4_2:57469608-57469627 None:intergenic 45.0%
GTTGACAAGGCTAATGACGA+CGG - chr4_2:57469811-57469830 Msa0609880:CDS 45.0%
CTAATGACGACGGATACAAC+TGG - chr4_2:57469821-57469840 Msa0609880:CDS 45.0%
GGATACAACTGGAGGAAGTA+TGG - chr4_2:57469832-57469851 Msa0609880:CDS 45.0%
GCAGTTACATGACCATCTAC+AGG + chr4_2:57469949-57469968 None:intergenic 45.0%
!! AGCGTGCAACAAGTTTTGTC+AGG - chr4_2:57470036-57470055 Msa0609880:CDS 45.0%
ACAAGTGACAGTGAGGAAGA+AGG - chr4_2:57470060-57470079 Msa0609880:intron 45.0%
ATGAACCTGGTCTCAAGAGA+AGG - chr4_2:57470106-57470125 Msa0609880:intron 45.0%
CTGGTCTCAAGAGAAGGTAA+GGG - chr4_2:57470112-57470131 Msa0609880:intron 45.0%
TATGTGAAAGGGCTGGATTC+AGG + chr4_2:57470453-57470472 None:intergenic 45.0%
TGAATCCAGCCCTTTCACAT+AGG - chr4_2:57470452-57470471 Msa0609880:intron 45.0%
AAGTGATGTGGATCTCTTGG+AGG - chr4_2:57470510-57470529 Msa0609880:intron 45.0%
TCAAAGGCAACCCATATCCA+AGG - chr4_2:57470569-57470588 Msa0609880:intron 45.0%
! ATGTTCGGAAGCATGTTGAG+AGG - chr4_2:57471083-57471102 Msa0609880:intron 45.0%
! TGTTCGGAAGCATGTTGAGA+GGG - chr4_2:57471084-57471103 Msa0609880:intron 45.0%
GCATGTTGAGAGGGTTTCAA+CGG - chr4_2:57471093-57471112 Msa0609880:intron 45.0%
!! TGACTGTTAGTCTTAGCTGC+TGG + chr4_2:57471169-57471188 None:intergenic 45.0%
!! TGAGGCCAAAGTTTTGACCA+AGG - chr4_2:57471411-57471430 Msa0609880:five_prime_UTR 45.0%
! ATACCACTTGTTGGGGAGTT+TGG + chr4_2:57471607-57471626 None:intergenic 45.0%
! GCTAAGCATACCACTTGTTG+GGG + chr4_2:57471614-57471633 None:intergenic 45.0%
!!! TTAATAATTAAAAAGTATAT+TGG - chr4_2:57468818-57468837 Msa0609880:intron 5.0%
TTGGAGGTGGAAATGGAGAG+TGG - chr4_2:57468367-57468386 Msa0609880:CDS 50.0%
GAAAGCAAAGTCATGGGACC+TGG + chr4_2:57468414-57468433 None:intergenic 50.0%
GGAGAAGTGAACATGGCCAA+CGG + chr4_2:57468552-57468571 None:intergenic 50.0%
CTGAGGTGGAGAAGTGAACA+TGG + chr4_2:57468559-57468578 None:intergenic 50.0%
CATGTTCACTTCTCCACCTC+AGG - chr4_2:57468557-57468576 Msa0609880:CDS 50.0%
ATCGAGCTTAAGGGGTCATG+TGG + chr4_2:57468665-57468684 None:intergenic 50.0%
!! CTTGTGCTAGTGCTTGCTGT+TGG + chr4_2:57469609-57469628 None:intergenic 50.0%
ATGACGACGGATACAACTGG+AGG - chr4_2:57469824-57469843 Msa0609880:CDS 50.0%
GTTGAACGCGATCCTGTAGA+TGG - chr4_2:57469934-57469953 Msa0609880:CDS 50.0%
!! TTGTGAGCTTGCTAGGACGT+GGG + chr4_2:57470005-57470024 None:intergenic 50.0%
!! TTTGTGAGCTTGCTAGGACG+TGG + chr4_2:57470006-57470025 None:intergenic 50.0%
GTCAGGAACAAGTGACAGTG+AGG - chr4_2:57470053-57470072 Msa0609880:intron 50.0%
CCTTACCTTCTCTTGAGACC+AGG + chr4_2:57470114-57470133 None:intergenic 50.0%
CCTGGTCTCAAGAGAAGGTA+AGG - chr4_2:57470111-57470130 Msa0609880:intron 50.0%
AAGGGCTGGATTCAGGAGTT+TGG + chr4_2:57470446-57470465 None:intergenic 50.0%
ACAGTCCTATGTGAAAGGGC+TGG + chr4_2:57470460-57470479 None:intergenic 50.0%
GATGTGGATCTCTTGGAGGA+TGG - chr4_2:57470514-57470533 Msa0609880:intron 50.0%
CAACTCCGGGTTGCAATGTT+CGG - chr4_2:57471068-57471087 Msa0609880:intron 50.0%
TGCTTCCGAACATTGCAACC+CGG + chr4_2:57471076-57471095 None:intergenic 50.0%
! CTTAGATGTGCCACTGCTGA+AGG + chr4_2:57471274-57471293 None:intergenic 50.0%
TCACCAAACTCCCCAACAAG+TGG - chr4_2:57471601-57471620 Msa0609880:five_prime_UTR 50.0%
! TGGTGGCATGTTTGGCTTCA+TGG - chr4_2:57471671-57471690 Msa0609880:five_prime_UTR 50.0%
! TGGCATGTTTGGCTTCATGG+AGG - chr4_2:57471674-57471693 Msa0609880:five_prime_UTR 50.0%
GGAAATGGAGAGTGGCCTTC+AGG - chr4_2:57468375-57468394 Msa0609880:CDS 55.0%
AATGGAGAGTGGCCTTCAGG+TGG - chr4_2:57468378-57468397 Msa0609880:CDS 55.0%
ATGGAGAGTGGCCTTCAGGT+GGG - chr4_2:57468379-57468398 Msa0609880:CDS 55.0%
GACACGTTGGATGTGGAGCA+TGG - chr4_2:57468489-57468508 Msa0609880:CDS 55.0%
ACGTTGGATGTGGAGCATGG+AGG - chr4_2:57468492-57468511 Msa0609880:CDS 55.0%
TTGGATGTGGAGCATGGAGG+AGG - chr4_2:57468495-57468514 Msa0609880:CDS 55.0%
TGAACATGGCCAACGGAGAC+AGG + chr4_2:57468545-57468564 None:intergenic 55.0%
GAGCTTAAGGGGTCATGTGG+TGG + chr4_2:57468662-57468681 None:intergenic 55.0%
TCAACACCAGCCTTCAGCAG+TGG - chr4_2:57471261-57471280 Msa0609880:CDS 55.0%
TGGAGAGTGGCCTTCAGGTG+GGG - chr4_2:57468380-57468399 Msa0609880:CDS 60.0%
GGACTAAACCCCCCACCTGA+AGG + chr4_2:57468393-57468412 None:intergenic 60.0%
TCAGGTGGGGGGTTTAGTCC+AGG - chr4_2:57468393-57468412 Msa0609880:CDS 60.0%
TCTTTCTCGGAGCTCCTCGC+CGG - chr4_2:57468465-57468484 Msa0609880:CDS 60.0%
CTCCACATCCAACGTGTCGC+CGG + chr4_2:57468487-57468506 None:intergenic 60.0%
GATGTGGAGCATGGAGGAGG+AGG - chr4_2:57468498-57468517 Msa0609880:CDS 60.0%
! GATGTGCCACTGCTGAAGGC+TGG + chr4_2:57471270-57471289 None:intergenic 60.0%
GGAGAGTGGCCTTCAGGTGG+GGG - chr4_2:57468381-57468400 Msa0609880:CDS 65.0%
GAGAGTGGCCTTCAGGTGGG+GGG - chr4_2:57468382-57468401 Msa0609880:CDS 65.0%
GTGGAGCATGGAGGAGGAGG+AGG - chr4_2:57468501-57468520 Msa0609880:CDS 65.0%
GAGCATGGAGGAGGAGGAGG+AGG - chr4_2:57468504-57468523 Msa0609880:CDS 65.0%
GGAGGAGGAGGAGGAGGAAG+AGG - chr4_2:57468510-57468529 Msa0609880:CDS 65.0%
GGAGGAGGAGGAGGAAGAGG+TGG - chr4_2:57468513-57468532 Msa0609880:CDS 65.0%
GGAGGAGGAGGAAGAGGTGG+TGG - chr4_2:57468516-57468535 Msa0609880:CDS 65.0%
! GGAGGAGGAAGAGGTGGTGG+TGG - chr4_2:57468519-57468538 Msa0609880:CDS 65.0%
!! TGGTGGTGGCCTGTCTCCGT+TGG - chr4_2:57468533-57468552 Msa0609880:CDS 65.0%
CATCCAACGTGTCGCCGGCG+AGG + chr4_2:57468482-57468501 None:intergenic 70.0%
CGCCGGCGACACGTTGGATG+TGG - chr4_2:57468482-57468501 Msa0609880:CDS 70.0%
GCTCCTCGCCGGCGACACGT+TGG - chr4_2:57468476-57468495 Msa0609880:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 57467950 57471731 57467950 ID=Msa0609880;Name=Msa0609880
chr4_2 mRNA 57467950 57471731 57467950 ID=Msa0609880-mRNA-1;Parent=Msa0609880;Name=Msa0609880-mRNA-1;_AED=0.03;_eAED=0.03;_QI=413|1|1|1|1|1|4|416|384
chr4_2 exon 57467950 57468630 57467950 ID=Msa0609880-mRNA-1:exon:14931;Parent=Msa0609880-mRNA-1
chr4_2 exon 57469091 57469249 57469091 ID=Msa0609880-mRNA-1:exon:14930;Parent=Msa0609880-mRNA-1
chr4_2 exon 57469554 57470068 57469554 ID=Msa0609880-mRNA-1:exon:14929;Parent=Msa0609880-mRNA-1
chr4_2 exon 57471103 57471731 57471103 ID=Msa0609880-mRNA-1:exon:14928;Parent=Msa0609880-mRNA-1
chr4_2 five_prime_UTR 57471319 57471731 57471319 ID=Msa0609880-mRNA-1:five_prime_utr;Parent=Msa0609880-mRNA-1
chr4_2 CDS 57471103 57471318 57471103 ID=Msa0609880-mRNA-1:cds;Parent=Msa0609880-mRNA-1
chr4_2 CDS 57469554 57470068 57469554 ID=Msa0609880-mRNA-1:cds;Parent=Msa0609880-mRNA-1
chr4_2 CDS 57469091 57469249 57469091 ID=Msa0609880-mRNA-1:cds;Parent=Msa0609880-mRNA-1
chr4_2 CDS 57468366 57468630 57468366 ID=Msa0609880-mRNA-1:cds;Parent=Msa0609880-mRNA-1
chr4_2 three_prime_UTR 57467950 57468365 57467950 ID=Msa0609880-mRNA-1:three_prime_utr;Parent=Msa0609880-mRNA-1
Gene Sequence

>Msa0609880

ATGGTTGGAGGTGGAAATGGAGAGTGGCCTTCAGGTGGGGGGTTTAGTCCAGGTCCCATGACTTTGCTTTCCAACTTGTTTGGTGACAACGATGATTGCAAGTCTTTCTCGGAGCTCCTCGCCGGCGACACGTTGGATGTGGAGCATGGAGGAGGAGGAGGAGGAAGAGGTGGTGGTGGCCTGTCTCCGTTGGCCATGTTCACTTCTCCACCTCAGCAAGCACTAGCACAAGCCTACTCAAATGCTCAAGTCCAATCTGAACATCCATTTTCTGCATCATTAGTACCCAACAGTACCTCATTGACACAAGTTCCATCAATAACACTCAATAACATTGCACAACAACTGATACCAAACTCTGTTGAGTATTCTTCTAACTCAGAACAAAGATTACACAAGTCTTCTTCTGTGAATGTTGACAAGGCTAATGACGACGGATACAACTGGAGGAAGTATGGACAGAAACAAGTGAAAGGTTGCGAGTTTCCTCGAAGTTATTACAAGTGCACACATCCAAGCTGTCTTGTGACGAAAAAAGTTGAACGCGATCCTGTAGATGGTCATGTAACTGCAATTATTTATAAAGGAGAGCACATTCATCAACGCCCACGTCCTAGCAAGCTCACAAACAACAATTCAAGCGTGCAACAAGTTTTGTCAGGAACAAGTGACAGTGAGGAAGAAGGAGATCATGAAACTGAAGTAGATTATGAACCTGGTCTCAAGAGAAGAAAAACAGAAGCCAAACTCCTGAATCCAGCCCTTTCACATAGGACTGTCTCAAAGCCTAAAATCATTGTGCAAACAACAAGTGATGTGGATCTCTTGGAGGATGGATATAGATGGCGCAAATATGGGCAGAAAGTTGTCAAAGGCAACCCATATCCAAGGAGCTATTACAAATGCACAACTCCGGGTTGCAATGTTCGGAAGCATGTTGAGAGGGTTTCAACGGATCCTAAAGCTGTATTGACAACATATGAAGGAAAACATAATCATGATGTACCAGCAGCTAAGACTAACAGTCATAACCTTGCTAGCAATAATAGTGCATCACTGCTAAAATCACAAAATGAGATGCAGAATTTCAACAGAAGGGGTCAACACCAGCCTTCAGCAGTGGCACATCTAAGATTGAAGGAAGAGCATATATAA
Protein sequence

>Msa0609880

MVGGGNGEWPSGGGFSPGPMTLLSNLFGDNDDCKSFSELLAGDTLDVEHGGGGGGRGGGGLSPLAMFTSPPQQALAQAYSNAQVQSEHPFSASLVPNSTSLTQVPSITLNNIAQQLIPNSVEYSSNSEQRLHKSSSVNVDKANDDGYNWRKYGQKQVKGCEFPRSYYKCTHPSCLVTKKVERDPVDGHVTAIIYKGEHIHQRPRPSKLTNNNSSVQQVLSGTSDSEEEGDHETEVDYEPGLKRRKTEAKLLNPALSHRTVSKPKIIVQTTSDVDLLEDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERVSTDPKAVLTTYEGKHNHDVPAAKTNSHNLASNNSASLLKSQNEMQNFNRRGQHQPSAVAHLRLKEEHI*