AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0001800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0001800 MtrunA17_Chr8g0391891 95.062 648 0 1 1 648 1 616 0.0 1254
Msa0001800 MtrunA17_Chr8g0337041 72.564 667 131 6 1 647 1 635 0.0 965
Msa0001800 MtrunA17_Chr7g0233071 74.312 654 122 6 1 647 1 615 0.0 962
Msa0001800 MtrunA17_Chr4g0055051 68.161 647 161 5 4 647 1 605 0.0 915
Msa0001800 MtrunA17_Chr8g0388271 63.231 650 191 5 4 647 1 608 0.0 873
Msa0001800 MtrunA17_Chr5g0396561 62.826 651 193 5 4 647 1 609 0.0 866
Msa0001800 MtrunA17_Chr8g0346971 62.137 655 198 5 4 647 1 616 0.0 845
Msa0001800 MtrunA17_Chr1g0161401 91.640 311 26 0 167 477 6 316 0.0 602
Msa0001800 MtrunA17_Chr2g0279671 36.381 525 282 8 5 519 22 504 1.27e-90 299
Msa0001800 MtrunA17_Chr1g0161411 77.326 172 37 1 477 648 2 171 4.49e-88 271
Msa0001800 MtrunA17_Chr4g0049731 35.810 525 285 7 5 519 13 495 8.55e-87 287
Msa0001800 MtrunA17_Chr4g0013611 29.596 544 317 10 1 524 1 498 1.74e-60 218
Msa0001800 MtrunA17_Chr4g0076951 28.333 540 326 10 1 524 1 495 2.31e-58 211
Msa0001800 MtrunA17_Chr1g0161391 63.057 157 24 3 1 155 1 125 3.78e-54 181
Msa0001800 MtrunA17_Chr8g0379961 32.484 314 161 7 35 342 68 336 3.83e-29 123
Msa0001800 MtrunA17_Chr8g0379941 32.515 326 165 9 35 352 71 349 7.60e-29 122
Msa0001800 MtrunA17_Chr8g0360401 24.615 390 218 12 12 373 31 372 6.31e-13 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0001800 AT1G14830.1 83.385 650 70 4 1 648 1 614 0.0 1112
Msa0001800 AT3G60190.1 73.476 656 131 5 1 647 1 622 0.0 996
Msa0001800 AT2G44590.3 70.679 648 148 4 4 647 1 610 0.0 947
Msa0001800 AT2G44590.2 68.056 648 148 5 4 647 1 593 0.0 904
Msa0001800 AT2G44590.1 67.951 649 148 6 4 647 1 594 0.0 900
Msa0001800 AT3G61760.1 63.524 647 194 6 4 647 1 608 0.0 862
Msa0001800 AT5G42080.4 63.524 647 194 5 4 647 1 608 0.0 861
Msa0001800 AT5G42080.1 63.524 647 194 5 4 647 1 608 0.0 861
Msa0001800 AT5G42080.3 62.906 647 192 6 4 647 1 602 0.0 846
Msa0001800 AT3G61760.2 64.086 607 176 6 4 607 1 568 0.0 813
Msa0001800 AT3G61760.3 67.437 476 120 4 4 476 1 444 0.0 678
Msa0001800 AT5G42080.2 68.547 461 110 3 4 461 1 429 0.0 663
Msa0001800 AT2G14120.4 36.158 531 281 9 5 519 19 507 2.94e-90 296
Msa0001800 AT2G14120.2 36.158 531 281 9 5 519 19 507 1.35e-89 295
Msa0001800 AT2G14120.1 36.158 531 281 9 5 519 19 507 1.41e-89 295
Msa0001800 AT4G33650.1 35.917 529 284 9 5 519 35 522 5.39e-86 286
Msa0001800 AT4G33650.2 35.917 529 284 9 5 519 35 522 5.85e-86 286
Msa0001800 AT2G14120.3 34.643 560 279 10 5 519 19 536 6.83e-86 286
Msa0001800 AT1G10290.1 29.282 543 317 11 1 524 1 495 1.05e-59 216
Msa0001800 AT1G59610.1 30.258 542 313 13 1 524 1 495 2.47e-58 212
Msa0001800 AT1G60500.1 23.349 651 408 16 35 645 65 664 2.42e-35 142
Msa0001800 AT1G60530.1 36.866 217 104 2 35 251 62 245 5.52e-34 132

Find 179 sgRNAs with CRISPR-Local

Find 535 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGACATTTGGCGCATAAAA+TGG 0.173187 1_1:+3524284 Msa0001800:CDS
CGACTCTGTGGCTTGGAAAT+AGG 0.183632 1_1:+3528002 Msa0001800:CDS
ATCTATAATTTGATTTGATT+TGG 0.190720 1_1:-3519834 None:intergenic
ATCAATTGTCTTGTTTATTA+AGG 0.199022 1_1:-3524513 None:intergenic
GGAGCATTCCGGTTTGAATT+TGG 0.210028 1_1:-3526377 None:intergenic
TGCACTTGCATATATTCTTT+TGG 0.236366 1_1:+3528141 Msa0001800:three_prime_UTR
TGATACACAGAAGGAGAAAT+TGG 0.249728 1_1:+3527888 Msa0001800:intron
GTGGCGAAGGTTTATCTCTT+TGG 0.255931 1_1:+3519981 Msa0001800:CDS
GGTTACAAAACTTGATCTTA+TGG 0.260054 1_1:+3523973 Msa0001800:CDS
ATTTGATTTGATTTGGGTTT+AGG 0.260511 1_1:-3519827 None:intergenic
TGCGCCAAATGTCCATATTC+TGG 0.263377 1_1:-3524276 None:intergenic
CAACTTCATAAGACCGAAAA+TGG 0.274604 1_1:+3520817 Msa0001800:CDS
TGCACGACACATTTCTAAAA+TGG 0.282163 1_1:-3524702 None:intergenic
GATGAAACAGATCGAATAAC+TGG 0.291503 1_1:+3521347 Msa0001800:CDS
ATTCGAATTCAAATTCAAAA+TGG 0.303106 1_1:+3519889 Msa0001800:exon
TTTGAATTTGGTGGTCCATT+TGG 0.308876 1_1:-3526365 None:intergenic
GACTCTGTGGCTTGGAAATA+GGG 0.314338 1_1:+3528003 Msa0001800:CDS
TGACAATGGACTACGGCTTT+TGG 0.316072 1_1:-3527188 None:intergenic
TTTGAGACAAGTCCAGAATA+TGG 0.316914 1_1:+3524264 Msa0001800:CDS
AGGCCGATTGCAGTGGATTC+CGG 0.317259 1_1:+3524566 Msa0001800:CDS
GGCCGATTGCAGTGGATTCC+GGG 0.320029 1_1:+3524567 Msa0001800:CDS
TTGAATTTGGTGGTCCATTT+GGG 0.329073 1_1:-3526364 None:intergenic
TCAGTAAAATTATCATTGTT+GGG 0.334634 1_1:-3526401 None:intergenic
AGTTACGCGGCTGGTTGATA+TGG 0.336032 1_1:+3526283 Msa0001800:CDS
ATCTAACAGCAGAATTCTTT+AGG 0.338181 1_1:+3526315 Msa0001800:CDS
TTTCTAAAATGGTGTATAGT+TGG 0.343193 1_1:-3524691 None:intergenic
TCTATAATTTGATTTGATTT+GGG 0.344762 1_1:-3519833 None:intergenic
CAAGTTCCTTCAAAACAAAA+TGG 0.346063 1_1:-3525783 None:intergenic
GCATCCACGGAGGCTTCTGC+TGG 0.348132 1_1:-3525097 None:intergenic
GTCAGTAAAATTATCATTGT+TGG 0.352098 1_1:-3526402 None:intergenic
TTCTTGAAGGGCGGCAATAC+AGG 0.352799 1_1:+3524145 Msa0001800:CDS
AAGTCGGTGAATCTCTTTCT+TGG 0.356235 1_1:-3520868 None:intergenic
AGCATTTGGAGCAAGTTATC+AGG 0.360469 1_1:+3524468 Msa0001800:intron
AAACTTGATCTTATGGATAA+AGG 0.363059 1_1:+3523980 Msa0001800:CDS
ATTTCAGGTGAAAGAACATT+TGG 0.368040 1_1:+3523947 Msa0001800:intron
TGGCGAAGGTTTATCTCTTT+GGG 0.372210 1_1:+3519982 Msa0001800:CDS
TTCTAAAATGGTGTATAGTT+GGG 0.382131 1_1:-3524690 None:intergenic
CCTGGTGGGGACCGGATATA+CGG 0.382856 1_1:+3524899 Msa0001800:CDS
GACTTTCTTCCTCGTGGATC+TGG 0.386806 1_1:+3520082 Msa0001800:CDS
GAATAAATGCTGAGTTGAAT+AGG 0.388151 1_1:-3521395 None:intergenic
GTAGTTTAGCAATGATCTCT+TGG 0.401450 1_1:-3527222 None:intergenic
GCAAAAGAAGTCGATCCTTC+AGG 0.402730 1_1:+3523800 Msa0001800:CDS
GAAGAAACTCAGCATATTCC+TGG 0.407055 1_1:-3520840 None:intergenic
GTCGTCGGTGGACAGAGTTC+AGG 0.407717 1_1:+3520025 Msa0001800:CDS
TGTTCAAGATATTGAACAAA+TGG 0.409474 1_1:+3522366 Msa0001800:CDS
AACTCGAACAGAAAAGTCTA+AGG 0.413813 1_1:+3528102 Msa0001800:three_prime_UTR
TTTGTATTTGCTGTTAATGT+TGG 0.414879 1_1:+3519683 Msa0001800:five_prime_UTR
TGTAAGTGCTTATATCAATA+TGG 0.415690 1_1:+3527139 Msa0001800:CDS
TTTATTAAGGCAATGATACT+AGG 0.426555 1_1:-3524500 None:intergenic
GACAATCACCTCCGCAAGAT+TGG 0.428586 1_1:+3526422 Msa0001800:CDS
TCTTGCTAGGCTTCTATCTC+AGG 0.429303 1_1:+3524317 Msa0001800:CDS
GGATGAAGACCCATCCCTAA+TGG 0.431010 1_1:+3527921 Msa0001800:CDS
CTCAGCATTTATTCTCCAAA+TGG 0.434296 1_1:+3521404 Msa0001800:CDS
CTTGTACAATTCAAGCCTCT+TGG 0.436298 1_1:-3527962 None:intergenic
TTAACCCTCATAGATCTTCC+TGG 0.442577 1_1:+3522192 Msa0001800:CDS
TTCAGGAAAATCCTCTGTCT+TGG 0.443738 1_1:+3520042 Msa0001800:CDS
GGACATTTGGCGCATAAAAT+GGG 0.448357 1_1:+3524285 Msa0001800:CDS
TCATCTGATTGCTCCAGAGC+AGG 0.454372 1_1:+3525030 Msa0001800:CDS
TCTGTCTTGGAAAGTGTTGT+TGG 0.456396 1_1:+3520055 Msa0001800:CDS
ATCTTGATTGGCGGGAGAGA+TGG 0.457501 1_1:-3523750 None:intergenic
TTATGTTCAAGTTGGAAAGA+AGG 0.468501 1_1:+3527247 Msa0001800:CDS
AAGTCCAGAATATGGACATT+TGG 0.470149 1_1:+3524272 Msa0001800:CDS
ACAGTATCTGTTGTAAAATG+TGG 0.472665 1_1:-3528032 None:intergenic
ACCCCGGAATCCACTGCAAT+CGG 0.472822 1_1:-3524569 None:intergenic
TGAAGTGGCAATATCTTGAT+TGG 0.475261 1_1:-3523762 None:intergenic
CTGTCTTCTTGCTTTCGTCT+CGG 0.478922 1_1:-3526262 None:intergenic
TTAGGTGATCACGGTGGCGA+AGG 0.483199 1_1:+3519968 Msa0001800:CDS
TGATTTGATTTGGGTTTAGG+AGG 0.489992 1_1:-3519824 None:intergenic
GCGAAAATGAAGGTTCTTGA+AGG 0.491969 1_1:+3524132 Msa0001800:intron
CTTCCTTCCGTCGCCGTCGT+CGG 0.492244 1_1:+3520010 Msa0001800:CDS
AAGGAAAGATGGCGATCAAA+GGG 0.493239 1_1:-3524962 None:intergenic
GCATTCCGGTTTGAATTTGG+TGG 0.498132 1_1:-3526374 None:intergenic
CAGAGTTAGACCGCATTGGC+AGG 0.501137 1_1:+3524546 Msa0001800:CDS
AATACAGGCTGCAGCATCCA+TGG 0.504183 1_1:+3524160 Msa0001800:CDS
TACGAGTGTTGGTCTGCTGT+TGG 0.504855 1_1:+3519646 Msa0001800:five_prime_UTR
GAACCAGAAAAGAACCCAAA+TGG 0.505929 1_1:+3526350 Msa0001800:CDS
GTTGTCTTTCATTATTTACA+AGG 0.506113 1_1:+3520766 Msa0001800:CDS
TCAGACGTCCTGGTGGGGAC+CGG 0.509636 1_1:+3524891 Msa0001800:intron
AACTCAGTGGCTTTATACAC+TGG 0.514413 1_1:-3528165 None:intergenic
CAGTAAAATTATCATTGTTG+GGG 0.514716 1_1:-3526400 None:intergenic
AGTCTTCTATAACCCTGCTC+TGG 0.517134 1_1:-3525043 None:intergenic
ATTAACAGCAAATACAAAAG+TGG 0.517559 1_1:-3519678 None:intergenic
AACTTCTATTTCAGACGTCC+TGG 0.519751 1_1:+3524881 Msa0001800:intron
CAAGAAGACAGTTACGCGGC+TGG 0.521076 1_1:+3526274 Msa0001800:CDS
CCGTATATCCGGTCCCCACC+AGG 0.521654 1_1:-3524899 None:intergenic
TAAGGAAAGATGGCGATCAA+AGG 0.525558 1_1:-3524963 None:intergenic
CATCCACGGAGGCTTCTGCT+GGG 0.526525 1_1:-3525096 None:intergenic
GGAAGAGACTTTCTTCCTCG+TGG 0.528185 1_1:+3520076 Msa0001800:CDS
ATGGACCACCAAATTCAAAC+CGG 0.530820 1_1:+3526369 Msa0001800:CDS
GATACACAGAAGGAGAAATT+GGG 0.530963 1_1:+3527889 Msa0001800:intron
AAAGTTGTCACTGAAGCTGA+TGG 0.531731 1_1:+3524998 Msa0001800:CDS
GTGGCAATATCTTGATTGGC+GGG 0.532340 1_1:-3523758 None:intergenic
CATTGGCAGGCCGATTGCAG+TGG 0.533531 1_1:+3524559 Msa0001800:CDS
GATTTGATTTGGGTTTAGGA+GGG 0.535120 1_1:-3519823 None:intergenic
CTGCAATCGGCCTGCCAATG+CGG 0.540716 1_1:-3524556 None:intergenic
AGAAAGAGATTCACCGACTT+CGG 0.540723 1_1:+3520871 Msa0001800:CDS
TCAGCCCAGGAAGATCTATG+AGG 0.540894 1_1:-3522197 None:intergenic
GCGACGATGACGAGCTTGAT+CGG 0.541831 1_1:+3519911 Msa0001800:CDS
ACCAACACTCGTATATCAAA+CGG 0.542027 1_1:-3519636 None:intergenic
ACGATATCGACTCTGTGGCT+TGG 0.542824 1_1:+3527995 Msa0001800:CDS
AGGCTGCAGCATCCATGGGT+TGG 0.551004 1_1:+3524165 Msa0001800:CDS
TGGGATCAGAATATCTTGCT+AGG 0.551156 1_1:+3524304 Msa0001800:CDS
GGAGAAATTGGGTGCCATGT+TGG 0.551512 1_1:+3527900 Msa0001800:CDS
TGTGTTTGTCTGTCTTTGAA+AGG 0.551523 1_1:-3519710 None:intergenic
CCTTCCGTCGCCGTCGTCGG+TGG 0.552612 1_1:+3520013 Msa0001800:CDS
GAAACTTCAGTTACCGAAGT+CGG 0.553424 1_1:-3520884 None:intergenic
CAGTATCTGTTGTAAAATGT+GGG 0.553517 1_1:-3528031 None:intergenic
TGTTCAAGTTGGAAAGAAGG+AGG 0.554198 1_1:+3527250 Msa0001800:CDS
ACCGTTTGATATACGAGTGT+TGG 0.554247 1_1:+3519635 Msa0001800:five_prime_UTR
ACCGCACTTACCCTCCATCC+AGG 0.555227 1_1:-3524748 None:intergenic
TCATAAGACCGAAAATGGCC+AGG 0.558470 1_1:+3520822 Msa0001800:CDS
GCCACCGTGATCACCTAAAA+CGG 0.560290 1_1:-3519963 None:intergenic
GGTTATAGAAGACTCATTGA+AGG 0.563512 1_1:+3525052 Msa0001800:CDS
TATTGTTACGCGGAGGCCGC+TGG 0.566066 1_1:+3520789 Msa0001800:CDS
TTTAAAGAGCACCTGGATGG+AGG 0.566959 1_1:+3524737 Msa0001800:CDS
TATTAATATCAGCTTGTGAA+CGG 0.567091 1_1:-3524197 None:intergenic
TAAAGTATTTAAAGAGCACC+TGG 0.567215 1_1:+3524730 Msa0001800:CDS
CGAAAATGAAGGTTCTTGAA+GGG 0.572722 1_1:+3524133 Msa0001800:intron
CATGATTGTTGCTCGAAGGA+AGG 0.574494 1_1:+3524230 Msa0001800:CDS
TCTAACTTGACAATGGACTA+CGG 0.575000 1_1:-3527195 None:intergenic
CTAAAACGGTACAAGCTCGT+TGG 0.575495 1_1:-3519949 None:intergenic
GGTCCGTTCGTATGTTGAGA+AGG 0.575952 1_1:+3522387 Msa0001800:CDS
TAACCCTCATAGATCTTCCT+GGG 0.576713 1_1:+3522193 Msa0001800:CDS
GCAATGTCATTTGAAAGCGT+TGG 0.577613 1_1:-3526209 None:intergenic
TGGCTTCTCTAACTTGACAA+TGG 0.578361 1_1:-3527202 None:intergenic
AATGCAGAGTTAGACCGCAT+TGG 0.578744 1_1:+3524542 Msa0001800:CDS
CGGTTCACAATTCCAACCCA+TGG 0.581424 1_1:-3524177 None:intergenic
CCACCGACGACGGCGACGGA+AGG 0.582483 1_1:-3520013 None:intergenic
CCATGCAGCTGCTGTGAGGA+AGG 0.584586 1_1:+3521316 Msa0001800:intron
ATCCAGTGCTTCATTTGCAG+CGG 0.584720 1_1:-3526234 None:intergenic
ATGGCTAAGATAATGCAGTT+CGG 0.585285 1_1:-3523731 None:intergenic
AGTGGCAATATCTTGATTGG+CGG 0.585927 1_1:-3523759 None:intergenic
CTATTTCAGACGTCCTGGTG+GGG 0.587055 1_1:+3524886 Msa0001800:intron
CTGTCCACCGACGACGGCGA+CGG 0.587559 1_1:-3520017 None:intergenic
TTCTATTTCAGACGTCCTGG+TGG 0.588961 1_1:+3524884 Msa0001800:intron
CATCTGATTGCTCCAGAGCA+GGG 0.591556 1_1:+3525031 Msa0001800:CDS
AGATCTTCCTGGGCTGACAA+AGG 0.592661 1_1:+3522203 Msa0001800:CDS
TTAAAGAGCACCTGGATGGA+GGG 0.592992 1_1:+3524738 Msa0001800:CDS
CAAGAAGATTACAGCATCCA+CGG 0.593135 1_1:-3525110 None:intergenic
AACCGCTGCAAATGAAGCAC+TGG 0.596471 1_1:+3526232 Msa0001800:CDS
AGTAAAATTATCATTGTTGG+GGG 0.597465 1_1:-3526399 None:intergenic
GCCGATTGCAGTGGATTCCG+GGG 0.599749 1_1:+3524568 Msa0001800:CDS
ACTGCAACCTTTGTCAGCCC+AGG 0.602242 1_1:-3522210 None:intergenic
GTTTAGGAGGGAATGAACAA+AGG 0.602500 1_1:-3519811 None:intergenic
GTATTTAAAGAGCACCTGGA+TGG 0.604835 1_1:+3524734 Msa0001800:CDS
TCTATTTCAGACGTCCTGGT+GGG 0.606106 1_1:+3524885 Msa0001800:intron
GGGCTGACAAAGGTTGCAGT+AGG 0.607376 1_1:+3522213 Msa0001800:CDS
AACAACACTTTCCAAGACAG+AGG 0.607579 1_1:-3520053 None:intergenic
TGCTCTGGAGCAATCAGATG+AGG 0.607841 1_1:-3525028 None:intergenic
GTTATAGAAGACTCATTGAA+GGG 0.609274 1_1:+3525053 Msa0001800:CDS
ATACAGGCTGCAGCATCCAT+GGG 0.610950 1_1:+3524161 Msa0001800:CDS
GGGTCTATCAGCTATTTCAA+AGG 0.611791 1_1:+3525073 Msa0001800:CDS
AAGTTGTCACTGAAGCTGAT+GGG 0.616414 1_1:+3524999 Msa0001800:CDS
CAGCCCAGGAAGATCTATGA+GGG 0.621732 1_1:-3522196 None:intergenic
AAAATTACGTACCAATCTTG+CGG 0.622307 1_1:-3526433 None:intergenic
ACTCAGTGGCTTTATACACT+GGG 0.623710 1_1:-3528164 None:intergenic
AGGTGAAAGAACATTTGGAG+TGG 0.629893 1_1:+3523952 Msa0001800:intron
TCGACATGATTGTTGCTCGA+AGG 0.630142 1_1:+3524226 Msa0001800:CDS
AGGCCCAGCAGAAGCCTCCG+TGG 0.632406 1_1:+3525093 Msa0001800:CDS
GTGTTGTGCATTGTATTGAT+CGG 0.634154 1_1:+3520694 Msa0001800:CDS
TTACCTTCTCAACATACGAA+CGG 0.640976 1_1:-3522390 None:intergenic
GGATGGGTCTTCATCCAACA+TGG 0.649372 1_1:-3527914 None:intergenic
AGAGAAATCAAATAGCCAAG+AGG 0.661464 1_1:+3527947 Msa0001800:CDS
TTATGAAGTTGCAGTACCAG+CGG 0.662429 1_1:-3520805 None:intergenic
ATGAAACAGATCGAATAACT+GGG 0.663724 1_1:+3521348 Msa0001800:CDS
TAAGTCAATTGCAGAAACAG+AGG 0.664329 1_1:+3525810 Msa0001800:CDS
ATTTACAAGGTATTGTTACG+CGG 0.666912 1_1:+3520779 Msa0001800:CDS
GTAAAATTATCATTGTTGGG+GGG 0.668430 1_1:-3526398 None:intergenic
AAATGAAGGTTCTTGAAGGG+CGG 0.668784 1_1:+3524136 Msa0001800:intron
TACAAGGTATTGTTACGCGG+AGG 0.681922 1_1:+3520782 Msa0001800:CDS
TGAACTCTGTCCACCGACGA+CGG 0.684385 1_1:-3520023 None:intergenic
ATTACGTACCAATCTTGCGG+AGG 0.697717 1_1:-3526430 None:intergenic
TAGAGACGATATCGACTCTG+TGG 0.698748 1_1:+3527990 Msa0001800:CDS
GTGCATTGTATTGATCGGAG+TGG 0.716098 1_1:+3520699 Msa0001800:CDS
ATGCCCATGCAGCTGCTGTG+AGG 0.716543 1_1:+3521312 Msa0001800:intron
AATCACAACGTAGAACTCAG+TGG 0.732174 1_1:-3528178 None:intergenic
GAAGATTACAGCATCCACGG+AGG 0.775671 1_1:-3525107 None:intergenic
AAAGCAAGAAGACAGTTACG+CGG 0.786445 1_1:+3526270 Msa0001800:CDS
AAATGAATACCAGATCCACG+AGG 0.806447 1_1:-3520091 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTATGATTTGTTTTATT+AGG + chr1_1:3521715-3521734 Msa0001800:intron 10.0%
!! ATAACAAAATAAAATAACTT+TGG - chr1_1:3522553-3522572 None:intergenic 10.0%
!!! TCTATAATTTGATTTGATTT+GGG - chr1_1:3519836-3519855 None:intergenic 15.0%
!!! ATCTATAATTTGATTTGATT+TGG - chr1_1:3519837-3519856 None:intergenic 15.0%
!!! TTTCTTTTATCTTTTGTTAT+AGG + chr1_1:3520374-3520393 Msa0001800:intron 15.0%
!!! ATGTAATTGTTTCATTTTTA+TGG + chr1_1:3520997-3521016 Msa0001800:intron 15.0%
!! TTGATATTATTAAGACTTAA+TGG + chr1_1:3521037-3521056 Msa0001800:intron 15.0%
!!! TCAGATATATGATTATTTTT+TGG + chr1_1:3522147-3522166 Msa0001800:intron 15.0%
!!! CAGATATATGATTATTTTTT+GGG + chr1_1:3522148-3522167 Msa0001800:intron 15.0%
!!! AGATATATGATTATTTTTTG+GGG + chr1_1:3522149-3522168 Msa0001800:intron 15.0%
!! ATACCAAAGTTATTTAAAAA+AGG + chr1_1:3522506-3522525 Msa0001800:intron 15.0%
!! TACCAAAGTTATTTAAAAAA+GGG + chr1_1:3522603-3522622 Msa0001800:intron 15.0%
!!! ATATGACAAAATTGATTTTA+AGG + chr1_1:3523102-3523121 Msa0001800:intron 15.0%
!! AATTATTAGAGACAAAATTA+GGG + chr1_1:3523243-3523262 Msa0001800:intron 15.0%
!!! AATATTTTTTGTTTATCTCT+GGG - chr1_1:3523539-3523558 None:intergenic 15.0%
!!! TAATATTTTTTGTTTATCTC+TGG - chr1_1:3523540-3523559 None:intergenic 15.0%
!!! TTATTTTTTTTCAGCATAAA+AGG - chr1_1:3525965-3525984 None:intergenic 15.0%
!!! TTATGAATCTTAATTTTACA+TGG + chr1_1:3526535-3526554 Msa0001800:intron 15.0%
!!! CATTTCATTTGATTTTGTTT+TGG + chr1_1:3519731-3519750 Msa0001800:five_prime_UTR 20.0%
!!! AACAAAGGTTTTATTTAGAT+CGG - chr1_1:3519799-3519818 None:intergenic 20.0%
!! ATTCGAATTCAAATTCAAAA+TGG + chr1_1:3519889-3519908 Msa0001800:exon 20.0%
!!! TTATCTTTTGTTATAGGATT+AGG + chr1_1:3520380-3520399 Msa0001800:intron 20.0%
!!! ACTTGGTTATACATAATTTT+GGG - chr1_1:3520913-3520932 None:intergenic 20.0%
!!! AACTTGGTTATACATAATTT+TGG - chr1_1:3520914-3520933 None:intergenic 20.0%
!! TTGAAACAAAATAAGAAACT+TGG - chr1_1:3520930-3520949 None:intergenic 20.0%
!! AAAAATGAAACAATTACATG+AGG - chr1_1:3520996-3521015 None:intergenic 20.0%
!!! ATTGTTCATGTATATCATTT+TGG + chr1_1:3521438-3521457 Msa0001800:intron 20.0%
!!! CAATTTTACACAATTCTAAA+AGG - chr1_1:3521492-3521511 None:intergenic 20.0%
!!! TAAAGAAATTTCAGTGTTTT+GGG - chr1_1:3522256-3522275 None:intergenic 20.0%
!!! TTAAAGAAATTTCAGTGTTT+TGG - chr1_1:3522257-3522276 None:intergenic 20.0%
!!! GAAATTTCTTTAAAATTGAG+TGG + chr1_1:3522264-3522283 Msa0001800:intron 20.0%
!!! AAAATTTTATCAAGCAATCT+TGG + chr1_1:3522522-3522541 Msa0001800:intron 20.0%
!!! TACCCTTTTTTAAATAACTT+TGG - chr1_1:3522608-3522627 None:intergenic 20.0%
!!! ATCATTTTTATCTTTAATGC+TGG + chr1_1:3522705-3522724 Msa0001800:intron 20.0%
!!! ATTTGTTTCTTCTCATTTAA+CGG + chr1_1:3522753-3522772 Msa0001800:intron 20.0%
!!! ATTAAAGGAAAATGTTTTCA+TGG - chr1_1:3522802-3522821 None:intergenic 20.0%
!! AGATACAGGAAAAATATTAA+AGG - chr1_1:3522817-3522836 None:intergenic 20.0%
!!! AAATTGATTTTAAGGTTGTA+CGG + chr1_1:3523110-3523129 Msa0001800:intron 20.0%
!! AACTAAGTTTACTTTCTTAT+TGG - chr1_1:3523158-3523177 None:intergenic 20.0%
!! CAATTATTAGAGACAAAATT+AGG + chr1_1:3523242-3523261 Msa0001800:intron 20.0%
!!! TTTAACCATCTTTTTTACAT+AGG - chr1_1:3523275-3523294 None:intergenic 20.0%
!!! ATCAATTGTCTTGTTTATTA+AGG - chr1_1:3524516-3524535 None:intergenic 20.0%
!! TTGCATATCAATCTATAAAA+AGG - chr1_1:3524811-3524830 None:intergenic 20.0%
!!! AACTTTTTGGACATTTTTTA+AGG - chr1_1:3524984-3525003 None:intergenic 20.0%
!! CTATATGTTATATTATTCCT+TGG + chr1_1:3525169-3525188 Msa0001800:intron 20.0%
!! AACTATTTCAAATTCAAATC+TGG - chr1_1:3525213-3525232 None:intergenic 20.0%
!! ATATTATTTATAGACCTGAA+AGG - chr1_1:3526053-3526072 None:intergenic 20.0%
!! TAAATCCTAAAGTAAATGTT+CGG - chr1_1:3526078-3526097 None:intergenic 20.0%
!! TCAGTAAAATTATCATTGTT+GGG - chr1_1:3526404-3526423 None:intergenic 20.0%
!! TTTAAGTGTATTACTATTAC+AGG + chr1_1:3526484-3526503 Msa0001800:intron 20.0%
!!! ACATTTTTCTTTTATCATAG+TGG - chr1_1:3526861-3526880 None:intergenic 20.0%
!!! AACGTAATGTATTTTTAACA+CGG - chr1_1:3527101-3527120 None:intergenic 20.0%
!! TGAATATATTGACAAAGATA+TGG + chr1_1:3527545-3527564 Msa0001800:intron 20.0%
!! TAAGCTACAATAAACTAATA+TGG - chr1_1:3527644-3527663 None:intergenic 20.0%
!!! ATTAGTTTATTGTAGCTTAT+AGG + chr1_1:3527645-3527664 Msa0001800:intron 20.0%
!! TTGTAATTATAACTGAAAAC+TGG + chr1_1:3527860-3527879 Msa0001800:intron 20.0%
! ATTAACAGCAAATACAAAAG+TGG - chr1_1:3519681-3519700 None:intergenic 25.0%
!!! TTTGTATTTGCTGTTAATGT+TGG + chr1_1:3519683-3519702 Msa0001800:five_prime_UTR 25.0%
!!! TTCATTTGATTTTGTTTTGG+TGG + chr1_1:3519734-3519753 Msa0001800:five_prime_UTR 25.0%
!!! TCATTTGATTTTGTTTTGGT+GGG + chr1_1:3519735-3519754 Msa0001800:five_prime_UTR 25.0%
!!! ATTTGATTTGATTTGGGTTT+AGG - chr1_1:3519830-3519849 None:intergenic 25.0%
! AAATAAATAGCTGTAGACTT+AGG + chr1_1:3520251-3520270 Msa0001800:intron 25.0%
! AACTTAACATCTTAATCAAG+CGG - chr1_1:3520454-3520473 None:intergenic 25.0%
! GTGGAAATAGAAAAAAGAAA+TGG - chr1_1:3520663-3520682 None:intergenic 25.0%
!! TTTTTGCATTTCTGAATGAA+TGG + chr1_1:3520734-3520753 Msa0001800:CDS 25.0%
! GTTGTCTTTCATTATTTACA+AGG + chr1_1:3520766-3520785 Msa0001800:CDS 25.0%
! TAAACTTTCCTATGACTTAA+TGG - chr1_1:3521125-3521144 None:intergenic 25.0%
! TTCTCTATTTCCTAACTAAT+TGG + chr1_1:3521271-3521290 Msa0001800:intron 25.0%
!!! AAATCATAAAGAATTTGCTG+TGG + chr1_1:3522002-3522021 Msa0001800:intron 25.0%
! TGTTCAAGATATTGAACAAA+TGG + chr1_1:3522366-3522385 Msa0001800:CDS 25.0%
! TAAAATTTATCAAGCAAGCT+TGG + chr1_1:3522467-3522486 Msa0001800:intron 25.0%
! TAAAAAAGGGTAATGTTAAC+TGG + chr1_1:3522616-3522635 Msa0001800:intron 25.0%
!!! ATTATTTTGAAGTTGATTCC+TGG - chr1_1:3522942-3522961 None:intergenic 25.0%
! AGGAATCAACTTCAAAATAA+TGG + chr1_1:3522941-3522960 Msa0001800:intron 25.0%
!!! CATCGTTTTTATACAACAAA+GGG + chr1_1:3523037-3523056 Msa0001800:intron 25.0%
!!! ATCGTTTTTATACAACAAAG+GGG + chr1_1:3523038-3523057 Msa0001800:intron 25.0%
! CAAAGATGAAAATGTTATGA+TGG + chr1_1:3523180-3523199 Msa0001800:intron 25.0%
!! GACTTCTTTTGCAATTTTTA+TGG - chr1_1:3523792-3523811 None:intergenic 25.0%
! TCACCTGAAATAATAATAAG+AGG - chr1_1:3523938-3523957 None:intergenic 25.0%
! AAACTTGATCTTATGGATAA+AGG + chr1_1:3523980-3523999 Msa0001800:CDS 25.0%
! TATTAATATCAGCTTGTGAA+CGG - chr1_1:3524200-3524219 None:intergenic 25.0%
! TACTGTCATTAAACTCATTA+TGG + chr1_1:3524391-3524410 Msa0001800:intron 25.0%
!! TTTTCTTTCCTTTCTTTCTT+TGG + chr1_1:3524441-3524460 Msa0001800:intron 25.0%
! TTTATTAAGGCAATGATACT+AGG - chr1_1:3524503-3524522 None:intergenic 25.0%
!!! TTCTAAAATGGTGTATAGTT+GGG - chr1_1:3524693-3524712 None:intergenic 25.0%
!!! TTTCTAAAATGGTGTATAGT+TGG - chr1_1:3524694-3524713 None:intergenic 25.0%
! ATCAATAGTGTTAACTTTCT+TGG + chr1_1:3524830-3524849 Msa0001800:intron 25.0%
! TGAAAATAAAGAAAGCAAGT+GGG - chr1_1:3525258-3525277 None:intergenic 25.0%
! TTGAAAATAAAGAAAGCAAG+TGG - chr1_1:3525259-3525278 None:intergenic 25.0%
! AAAAGACGAGGAAAATATAA+AGG - chr1_1:3525408-3525427 None:intergenic 25.0%
!!! AGGAAATTAGGTTTTAACAA+TGG - chr1_1:3525455-3525474 None:intergenic 25.0%
!!! ATGAGAATTACTGATTCTTT+TGG + chr1_1:3526098-3526117 Msa0001800:intron 25.0%
!!! TGAGAATTACTGATTCTTTT+GGG + chr1_1:3526099-3526118 Msa0001800:intron 25.0%
! AGTAAAATTATCATTGTTGG+GGG - chr1_1:3526402-3526421 None:intergenic 25.0%
! CAGTAAAATTATCATTGTTG+GGG - chr1_1:3526403-3526422 None:intergenic 25.0%
! GTCAGTAAAATTATCATTGT+TGG - chr1_1:3526405-3526424 None:intergenic 25.0%
! TCTTTACATGAGCATTAAAA+TGG - chr1_1:3526630-3526649 None:intergenic 25.0%
! TGTAAGTGCTTATATCAATA+TGG + chr1_1:3527139-3527158 Msa0001800:CDS 25.0%
!!! AACTACTTTTATGTTCAAGT+TGG + chr1_1:3527239-3527258 Msa0001800:CDS 25.0%
!! AGGTATGATTTTGTAACTTT+TGG + chr1_1:3527270-3527289 Msa0001800:intron 25.0%
! GAGAGAAATTATTCTTAGAT+AGG - chr1_1:3527307-3527326 None:intergenic 25.0%
! CCATAAAGATAACATCTTAA+AGG - chr1_1:3527333-3527352 None:intergenic 25.0%
!!! CCTTTAAGATGTTATCTTTA+TGG + chr1_1:3527330-3527349 Msa0001800:intron 25.0%
! GTACAATAATCTTCTACTTA+AGG - chr1_1:3527577-3527596 None:intergenic 25.0%
! ACTAATATGGTTACTATACA+CGG - chr1_1:3527631-3527650 None:intergenic 25.0%
!! TTGATTTCTCTTTTCCATTA+GGG - chr1_1:3527938-3527957 None:intergenic 25.0%
!!! TTTGATTTCTCTTTTCCATT+AGG - chr1_1:3527939-3527958 None:intergenic 25.0%
!! GATTGGTTTCTTAGATTAGT+TGG + chr1_1:3520196-3520215 Msa0001800:intron 30.0%
ACTAATTTCATAACCTACGT+TGG - chr1_1:3520327-3520346 None:intergenic 30.0%
!! ATTTACAAGGTATTGTTACG+CGG + chr1_1:3520779-3520798 Msa0001800:CDS 30.0%
TGGATAATTTATCTTCTCAC+AGG + chr1_1:3521057-3521076 Msa0001800:intron 30.0%
!! TAGTAAATTTTAGCCACAAG+TGG - chr1_1:3521098-3521117 None:intergenic 30.0%
ACTAGTTACCATTAAGTCAT+AGG + chr1_1:3521114-3521133 Msa0001800:intron 30.0%
CAGAATAGAACCAATTAGTT+AGG - chr1_1:3521284-3521303 None:intergenic 30.0%
ATGAAACAGATCGAATAACT+GGG + chr1_1:3521348-3521367 Msa0001800:CDS 30.0%
! GAATAAATGCTGAGTTGAAT+AGG - chr1_1:3521398-3521417 None:intergenic 30.0%
AAGCTTGAAAGCAAATTGAT+TGG + chr1_1:3521464-3521483 Msa0001800:intron 30.0%
AGCTTGAAAGCAAATTGATT+GGG + chr1_1:3521465-3521484 Msa0001800:intron 30.0%
AACGATAACAAGGACATAAA+AGG - chr1_1:3521515-3521534 None:intergenic 30.0%
! ATACTCTTTTCCAGACAATT+GGG + chr1_1:3521547-3521566 Msa0001800:intron 30.0%
! TTTAACTTCAGAATAGTGAG+TGG - chr1_1:3521610-3521629 None:intergenic 30.0%
! ATTAGGTAGTTATTTCAACC+AGG + chr1_1:3521732-3521751 Msa0001800:intron 30.0%
!! CACTTTAAAGCAATTTCTGT+TGG - chr1_1:3521892-3521911 None:intergenic 30.0%
AATGGGAATATGAAAACACA+TGG + chr1_1:3522073-3522092 Msa0001800:intron 30.0%
AATTGAGTGGTATTCTAACA+AGG + chr1_1:3522277-3522296 Msa0001800:intron 30.0%
TCTGACTTACACTGAAATTT+CGG + chr1_1:3522312-3522331 Msa0001800:intron 30.0%
!! ATTTTGTTATCAAGCAAGCT+TGG + chr1_1:3522563-3522582 Msa0001800:intron 30.0%
AGTGTATAGATTCAATCTTG+GGG - chr1_1:3522645-3522664 None:intergenic 30.0%
CAGTGTATAGATTCAATCTT+GGG - chr1_1:3522646-3522665 None:intergenic 30.0%
ACAGTGTATAGATTCAATCT+TGG - chr1_1:3522647-3522666 None:intergenic 30.0%
! TGTGAGAACATTCTTCTTTT+TGG + chr1_1:3522838-3522857 Msa0001800:intron 30.0%
! AATTCCAATTTTCCAAGAAC+TGG - chr1_1:3523004-3523023 None:intergenic 30.0%
!! GCATCGTTTTTATACAACAA+AGG + chr1_1:3523036-3523055 Msa0001800:intron 30.0%
AACCTCCTATGTAAAAAAGA+TGG + chr1_1:3523267-3523286 Msa0001800:intron 30.0%
!!! AACCATCTTTTTTACATAGG+AGG - chr1_1:3523272-3523291 None:intergenic 30.0%
AAGATGGTTAAATCTAGTCT+TGG + chr1_1:3523283-3523302 Msa0001800:intron 30.0%
! TTTCTATCGTTACTGGTTAA+GGG - chr1_1:3523603-3523622 None:intergenic 30.0%
! TATTGTGTTTCTATCGTTAC+TGG - chr1_1:3523610-3523629 None:intergenic 30.0%
ACTCAATTAGACACTGAATT+TGG - chr1_1:3523696-3523715 None:intergenic 30.0%
! AATTTTTATGGCATCTGAAG+TGG - chr1_1:3523780-3523799 None:intergenic 30.0%
GCACCTCTTATTATTATTTC+AGG + chr1_1:3523932-3523951 Msa0001800:intron 30.0%
! ATTTCAGGTGAAAGAACATT+TGG + chr1_1:3523947-3523966 Msa0001800:intron 30.0%
GGTTACAAAACTTGATCTTA+TGG + chr1_1:3523973-3523992 Msa0001800:CDS 30.0%
!! TGCATGCTTATCTTTTGTTT+TGG + chr1_1:3524038-3524057 Msa0001800:intron 30.0%
TGAAATTGAGTGCTAAATGT+TGG + chr1_1:3524098-3524117 Msa0001800:intron 30.0%
TGTTCTTTATGCGAAAATGA+AGG + chr1_1:3524122-3524141 Msa0001800:intron 30.0%
!!! ATTGTGCTACTTATTTTTGC+AGG + chr1_1:3524667-3524686 Msa0001800:intron 30.0%
!! TAAAGTATTTAAAGAGCACC+TGG + chr1_1:3524730-3524749 Msa0001800:CDS 30.0%
! AGTTTTTGATCACCAATTAC+CGG + chr1_1:3524922-3524941 Msa0001800:CDS 30.0%
!!! GGACATTTTTTAAGGAAAGA+TGG - chr1_1:3524976-3524995 None:intergenic 30.0%
GTTATAGAAGACTCATTGAA+GGG + chr1_1:3525053-3525072 Msa0001800:CDS 30.0%
!!! TGCTTTTTTCTCTTTTCAAC+TGG + chr1_1:3525284-3525303 Msa0001800:intron 30.0%
! ATAAAGGCATGTTTAACAGA+TGG - chr1_1:3525392-3525411 None:intergenic 30.0%
! GCTTGTTGCATAAAGAAAAA+GGG - chr1_1:3525684-3525703 None:intergenic 30.0%
GATAGCATGTAACTTATATG+TGG - chr1_1:3525748-3525767 None:intergenic 30.0%
! CATGCTATCTTTTATTCTTC+AGG + chr1_1:3525759-3525778 Msa0001800:intron 30.0%
CAAGTTCCTTCAAAACAAAA+TGG - chr1_1:3525786-3525805 None:intergenic 30.0%
TATCTCCGAACATTTACTTT+AGG + chr1_1:3526070-3526089 Msa0001800:intron 30.0%
!!! GAGAATTACTGATTCTTTTG+GGG + chr1_1:3526100-3526119 Msa0001800:intron 30.0%
!! TAAGATTCAATTTCTGGTTC+TGG - chr1_1:3526148-3526167 None:intergenic 30.0%
CACATGTAAGATTCAATTTC+TGG - chr1_1:3526154-3526173 None:intergenic 30.0%
ATCTAACAGCAGAATTCTTT+AGG + chr1_1:3526315-3526334 Msa0001800:CDS 30.0%
GTAAAATTATCATTGTTGGG+GGG - chr1_1:3526401-3526420 None:intergenic 30.0%
AAAATTACGTACCAATCTTG+CGG - chr1_1:3526436-3526455 None:intergenic 30.0%
! ATTGGTACGTAATTTTCTAC+TGG + chr1_1:3526440-3526459 Msa0001800:intron 30.0%
! TTACTATTACAGGACTTGTT+TGG + chr1_1:3526494-3526513 Msa0001800:intron 30.0%
ACCCATAACAAAACTATTGT+CGG + chr1_1:3526717-3526736 Msa0001800:intron 30.0%
AAAAGAACTTACACAAGACA+TGG - chr1_1:3526924-3526943 None:intergenic 30.0%
TTACATTTGATCCTGAAACA+AGG - chr1_1:3527124-3527143 None:intergenic 30.0%
!! TTATGTTCAAGTTGGAAAGA+AGG + chr1_1:3527247-3527266 Msa0001800:CDS 30.0%
TAGATAAGTTACAATCGTGT+TGG + chr1_1:3527355-3527374 Msa0001800:intron 30.0%
AGATAAGTTACAATCGTGTT+GGG + chr1_1:3527356-3527375 Msa0001800:intron 30.0%
! TATATTTGTTGCGCATATCA+TGG + chr1_1:3527470-3527489 Msa0001800:intron 30.0%
ATAATTACACATCTCCATGT+GGG - chr1_1:3527599-3527618 None:intergenic 30.0%
TATAATTACACATCTCCATG+TGG - chr1_1:3527600-3527619 None:intergenic 30.0%
TACATAACATATGCTCAACT+AGG - chr1_1:3527675-3527694 None:intergenic 30.0%
! GCAAATTCACAAAGATTTTC+TGG + chr1_1:3527696-3527715 Msa0001800:intron 30.0%
ATCTTGATTGTACAATCTTC+AGG - chr1_1:3527749-3527768 None:intergenic 30.0%
ATTGTACAATCAAGATAGTC+AGG + chr1_1:3527753-3527772 Msa0001800:intron 30.0%
TATCTATTCTACAGCAACTA+TGG - chr1_1:3527830-3527849 None:intergenic 30.0%
CAGTATCTGTTGTAAAATGT+GGG - chr1_1:3528034-3528053 None:intergenic 30.0%
ACAGTATCTGTTGTAAAATG+TGG - chr1_1:3528035-3528054 None:intergenic 30.0%
! ATTTTACAACAGATACTGTG+AGG + chr1_1:3528036-3528055 Msa0001800:three_prime_UTR 30.0%
! TGCACTTGCATATATTCTTT+TGG + chr1_1:3528141-3528160 Msa0001800:three_prime_UTR 30.0%
ACCAACACTCGTATATCAAA+CGG - chr1_1:3519639-3519658 None:intergenic 35.0%
TGTGTTTGTCTGTCTTTGAA+AGG - chr1_1:3519713-3519732 None:intergenic 35.0%
!! GATTTGATTTGGGTTTAGGA+GGG - chr1_1:3519826-3519845 None:intergenic 35.0%
!! TGATTTGATTTGGGTTTAGG+AGG - chr1_1:3519827-3519846 None:intergenic 35.0%
! TTCTTAGATTAGTTGGTCCT+TGG + chr1_1:3520203-3520222 Msa0001800:intron 35.0%
TCTTCATAACTTTCCAACGT+AGG + chr1_1:3520311-3520330 Msa0001800:intron 35.0%
TTTCTATTTCCACTCCATGA+AGG + chr1_1:3520670-3520689 Msa0001800:intron 35.0%
TTCTATTTCCACTCCATGAA+GGG + chr1_1:3520671-3520690 Msa0001800:intron 35.0%
! GTGTTGTGCATTGTATTGAT+CGG + chr1_1:3520694-3520713 Msa0001800:CDS 35.0%
CAACTTCATAAGACCGAAAA+TGG + chr1_1:3520817-3520836 Msa0001800:CDS 35.0%
ATTTATCTTCTCACAGGTAG+TGG + chr1_1:3521063-3521082 Msa0001800:intron 35.0%
AGCGAACTTAAGTTTCAAAC+TGG + chr1_1:3521155-3521174 Msa0001800:intron 35.0%
GATGAAACAGATCGAATAAC+TGG + chr1_1:3521347-3521366 Msa0001800:CDS 35.0%
CTCAGCATTTATTCTCCAAA+TGG + chr1_1:3521404-3521423 Msa0001800:CDS 35.0%
GCTTGAAAGCAAATTGATTG+GGG + chr1_1:3521466-3521485 Msa0001800:intron 35.0%
! CATACTCTTTTCCAGACAAT+TGG + chr1_1:3521546-3521565 Msa0001800:intron 35.0%
! TACTCTTTTCCAGACAATTG+GGG + chr1_1:3521548-3521567 Msa0001800:intron 35.0%
TGAAATTTACCCCAATTGTC+TGG - chr1_1:3521560-3521579 None:intergenic 35.0%
TAGATCGAACTATTTCACGT+GGG + chr1_1:3521582-3521601 Msa0001800:intron 35.0%
! CAGGACAAAATCGTCAATTT+TGG - chr1_1:3521766-3521785 None:intergenic 35.0%
! TTGACGATTTTGTCCTGTTT+AGG + chr1_1:3521769-3521788 Msa0001800:intron 35.0%
TCTATATCAGCAACCTAAAC+AGG - chr1_1:3521785-3521804 None:intergenic 35.0%
! TGGTGCTAAAGAAAATTCAC+AGG + chr1_1:3521843-3521862 Msa0001800:intron 35.0%
GGTGCTAAAGAAAATTCACA+GGG + chr1_1:3521844-3521863 Msa0001800:intron 35.0%
! AATAAGCAGAAAGTGCAACA+TGG - chr1_1:3521979-3521998 None:intergenic 35.0%
TATCTCAAAACAAAGAGTCG+CGG - chr1_1:3522127-3522146 None:intergenic 35.0%
TTACCTTCTCAACATACGAA+CGG - chr1_1:3522393-3522412 None:intergenic 35.0%
GTGTATAGATTCAATCTTGG+GGG - chr1_1:3522644-3522663 None:intergenic 35.0%
CTGTAAACTGCTTTCACATT+AGG + chr1_1:3522663-3522682 Msa0001800:intron 35.0%
! CTCATTTAACGGATAAAGTG+AGG + chr1_1:3522764-3522783 Msa0001800:intron 35.0%
GAATGTTCTCACAAAGATAC+AGG - chr1_1:3522831-3522850 None:intergenic 35.0%
! TTTGAAGTTGATTCCTGGTA+TGG - chr1_1:3522937-3522956 None:intergenic 35.0%
TTACTCAAATCTCCAGTTCT+TGG + chr1_1:3522989-3523008 Msa0001800:intron 35.0%
ATCTCCAGTTCTTGGAAAAT+TGG + chr1_1:3522997-3523016 Msa0001800:intron 35.0%
!! TGGTTAAATCTAGTCTTGGA+TGG + chr1_1:3523287-3523306 Msa0001800:intron 35.0%
GAGAGAGATTTAGATGCAAA+TGG + chr1_1:3523394-3523413 Msa0001800:intron 35.0%
CCTTCTTTACAACAACAATG+AGG - chr1_1:3523507-3523526 None:intergenic 35.0%
! CCTCATTGTTGTTGTAAAGA+AGG + chr1_1:3523504-3523523 Msa0001800:intron 35.0%
AATAACAGTCAAAATGAGCG+TGG + chr1_1:3523568-3523587 Msa0001800:intron 35.0%
ATAACAGTCAAAATGAGCGT+GGG + chr1_1:3523569-3523588 Msa0001800:intron 35.0%
! GTTTCTATCGTTACTGGTTA+AGG - chr1_1:3523604-3523623 None:intergenic 35.0%
ATGGCTAAGATAATGCAGTT+CGG - chr1_1:3523734-3523753 None:intergenic 35.0%
TGAAGTGGCAATATCTTGAT+TGG - chr1_1:3523765-3523784 None:intergenic 35.0%
ATATCCCTGAAATTCCTTAC+AGG - chr1_1:3523847-3523866 None:intergenic 35.0%
TGCTTTCTCTACATGAATGA+CGG - chr1_1:3523915-3523934 None:intergenic 35.0%
CGAAAATGAAGGTTCTTGAA+GGG + chr1_1:3524133-3524152 Msa0001800:intron 35.0%
! TTTGAGACAAGTCCAGAATA+TGG + chr1_1:3524264-3524283 Msa0001800:CDS 35.0%
AAGTCCAGAATATGGACATT+TGG + chr1_1:3524272-3524291 Msa0001800:CDS 35.0%
CTATCTCAGGTATTCTCATT+TGG + chr1_1:3524330-3524349 Msa0001800:intron 35.0%
TGCTGAAACCAAAGAAAGAA+AGG - chr1_1:3524452-3524471 None:intergenic 35.0%
! CTTTCTTTGGTTTCAGCATT+TGG + chr1_1:3524454-3524473 Msa0001800:intron 35.0%
! TGCACGACACATTTCTAAAA+TGG - chr1_1:3524705-3524724 None:intergenic 35.0%
GATCAAAAACTCCGTATATC+CGG - chr1_1:3524913-3524932 None:intergenic 35.0%
!!! TTTTTAAAGCAGCCGGTAAT+TGG - chr1_1:3524937-3524956 None:intergenic 35.0%
!!! GGAAGTTTTTTTAAAGCAGC+CGG - chr1_1:3524944-3524963 None:intergenic 35.0%
GGTTATAGAAGACTCATTGA+AGG + chr1_1:3525052-3525071 Msa0001800:CDS 35.0%
TTTAACAATGGCCCATATCT+GGG - chr1_1:3525443-3525462 None:intergenic 35.0%
! TTTTAACAATGGCCCATATC+TGG - chr1_1:3525444-3525463 None:intergenic 35.0%
TAAACAAAAAATCGAGCAGC+AGG - chr1_1:3525490-3525509 None:intergenic 35.0%
! GATATGTCATTTCCTGAAGT+TGG + chr1_1:3525511-3525530 Msa0001800:intron 35.0%
TTTCAAAGTTACAAGCCTAC+AGG - chr1_1:3525540-3525559 None:intergenic 35.0%
TTTCTTCGTATCCTACCTTA+TGG + chr1_1:3525565-3525584 Msa0001800:intron 35.0%
TAATAGATAGCAACCACCAT+GGG - chr1_1:3525613-3525632 None:intergenic 35.0%
ATAATAGATAGCAACCACCA+TGG - chr1_1:3525614-3525633 None:intergenic 35.0%
ACACAAGGTAAAAAGTCATC+AGG - chr1_1:3525639-3525658 None:intergenic 35.0%
! CGCTTGTTGCATAAAGAAAA+AGG - chr1_1:3525685-3525704 None:intergenic 35.0%
!!! TCAGGTCCATTTTGTTTTGA+AGG + chr1_1:3525777-3525796 Msa0001800:intron 35.0%
TAAGTCAATTGCAGAAACAG+AGG + chr1_1:3525810-3525829 Msa0001800:CDS 35.0%
TCAAATATAGACGTGCATGT+TGG + chr1_1:3525881-3525900 Msa0001800:intron 35.0%
!!! AATTACTGATTCTTTTGGGG+AGG + chr1_1:3526103-3526122 Msa0001800:intron 35.0%
!!! ATTACTGATTCTTTTGGGGA+GGG + chr1_1:3526104-3526123 Msa0001800:intron 35.0%
CTTACATGTGTGATACTTCT+TGG + chr1_1:3526164-3526183 Msa0001800:intron 35.0%
! TTGAATTTGGTGGTCCATTT+GGG - chr1_1:3526367-3526386 None:intergenic 35.0%
! TTTGAATTTGGTGGTCCATT+TGG - chr1_1:3526368-3526387 None:intergenic 35.0%
! TATTACAGGACTTGTTTGGT+TGG + chr1_1:3526498-3526517 Msa0001800:intron 35.0%
!!! GCCGACAATAGTTTTGTTAT+GGG - chr1_1:3526721-3526740 None:intergenic 35.0%
CATAACAAAACTATTGTCGG+CGG + chr1_1:3526720-3526739 Msa0001800:intron 35.0%
TAAACCCGTCATATAGTTCT+TGG + chr1_1:3526754-3526773 Msa0001800:intron 35.0%
AAACCCGTCATATAGTTCTT+GGG + chr1_1:3526755-3526774 Msa0001800:intron 35.0%
TGATCCCAAGAACTATATGA+CGG - chr1_1:3526762-3526781 None:intergenic 35.0%
TACACAAGACATGGAAGAAA+AGG - chr1_1:3526915-3526934 None:intergenic 35.0%
!! GCTTCCACTTGTTTTTCTAA+GGG + chr1_1:3526982-3527001 Msa0001800:intron 35.0%
! TACATTACGTTCCTTGTTTC+AGG + chr1_1:3527110-3527129 Msa0001800:intron 35.0%
!! TCTAACTTGACAATGGACTA+CGG - chr1_1:3527198-3527217 None:intergenic 35.0%
GTAGTTTAGCAATGATCTCT+TGG - chr1_1:3527225-3527244 None:intergenic 35.0%
!! TGAAACATGAAGCATTGCAA+TGG - chr1_1:3527414-3527433 None:intergenic 35.0%
TTGCAATGCTTCATGTTTCA+TGG + chr1_1:3527414-3527433 Msa0001800:intron 35.0%
ATTGCAACAAATGCGTAATG+TGG + chr1_1:3527497-3527516 Msa0001800:intron 35.0%
AGAAGATTATTGTACCCACA+TGG + chr1_1:3527582-3527601 Msa0001800:intron 35.0%
TAACATATGCTCAACTAGGT+AGG - chr1_1:3527671-3527690 None:intergenic 35.0%
TGATACACAGAAGGAGAAAT+TGG + chr1_1:3527888-3527907 Msa0001800:intron 35.0%
GATACACAGAAGGAGAAATT+GGG + chr1_1:3527889-3527908 Msa0001800:intron 35.0%
! TTCTCTTTTCCATTAGGGAT+GGG - chr1_1:3527933-3527952 None:intergenic 35.0%
! TTTCTCTTTTCCATTAGGGA+TGG - chr1_1:3527934-3527953 None:intergenic 35.0%
AGAGAAATCAAATAGCCAAG+AGG + chr1_1:3527947-3527966 Msa0001800:CDS 35.0%
AACTCGAACAGAAAAGTCTA+AGG + chr1_1:3528102-3528121 Msa0001800:three_prime_UTR 35.0%
ACCGTTTGATATACGAGTGT+TGG + chr1_1:3519635-3519654 Msa0001800:five_prime_UTR 40.0%
GTTTAGGAGGGAATGAACAA+AGG - chr1_1:3519814-3519833 None:intergenic 40.0%
!! TGTACCGTTTTAGGTGATCA+CGG + chr1_1:3519959-3519978 Msa0001800:CDS 40.0%
TGGCGAAGGTTTATCTCTTT+GGG + chr1_1:3519982-3520001 Msa0001800:CDS 40.0%
TTCAGGAAAATCCTCTGTCT+TGG + chr1_1:3520042-3520061 Msa0001800:CDS 40.0%
AACAACACTTTCCAAGACAG+AGG - chr1_1:3520056-3520075 None:intergenic 40.0%
!! TCTGTCTTGGAAAGTGTTGT+TGG + chr1_1:3520055-3520074 Msa0001800:CDS 40.0%
AAATGAATACCAGATCCACG+AGG - chr1_1:3520094-3520113 None:intergenic 40.0%
TTAGTCGTAGACGATGTGAT+TGG + chr1_1:3520179-3520198 Msa0001800:intron 40.0%
AAAACTCGGTATCTAGTCCA+AGG - chr1_1:3520223-3520242 None:intergenic 40.0%
ATGATATGCTGAGTAGCAGT+TGG + chr1_1:3520556-3520575 Msa0001800:intron 40.0%
TCTATTTCCACTCCATGAAG+GGG + chr1_1:3520672-3520691 Msa0001800:intron 40.0%
TTATGAAGTTGCAGTACCAG+CGG - chr1_1:3520808-3520827 None:intergenic 40.0%
!! AGCATATTCCTGGCCATTTT+CGG - chr1_1:3520833-3520852 None:intergenic 40.0%
GAAGAAACTCAGCATATTCC+TGG - chr1_1:3520843-3520862 None:intergenic 40.0%
AAGTCGGTGAATCTCTTTCT+TGG - chr1_1:3520871-3520890 None:intergenic 40.0%
!! AGAAAGAGATTCACCGACTT+CGG + chr1_1:3520871-3520890 Msa0001800:CDS 40.0%
GAAACTTCAGTTACCGAAGT+CGG - chr1_1:3520887-3520906 None:intergenic 40.0%
! GCTAGCTTAGCTACTCATTA+TGG - chr1_1:3520962-3520981 None:intergenic 40.0%
CAATGCAGCTACATACCATT+TGG - chr1_1:3521422-3521441 None:intergenic 40.0%
GTTGCTTCTCAACGATAACA+AGG - chr1_1:3521525-3521544 None:intergenic 40.0%
GTAGATCGAACTATTTCACG+TGG + chr1_1:3521581-3521600 Msa0001800:intron 40.0%
GCAAAACATTCACCAGTAGA+AGG - chr1_1:3521690-3521709 None:intergenic 40.0%
GTTGTTGTGTCCTTCAGATA+GGG + chr1_1:3521921-3521940 Msa0001800:intron 40.0%
TTGTTGTGTCCTTCAGATAG+GGG + chr1_1:3521922-3521941 Msa0001800:intron 40.0%
TGCTGTGGTTGAAGAACATT+AGG + chr1_1:3522017-3522036 Msa0001800:intron 40.0%
CATATTCCCATTTCCCAACA+AGG - chr1_1:3522065-3522084 None:intergenic 40.0%
TTAACCCTCATAGATCTTCC+TGG + chr1_1:3522192-3522211 Msa0001800:CDS 40.0%
TAACCCTCATAGATCTTCCT+GGG + chr1_1:3522193-3522212 Msa0001800:CDS 40.0%
! AATTTCGGCTACTTTCACAG+AGG + chr1_1:3522327-3522346 Msa0001800:intron 40.0%
! ATTTCGGCTACTTTCACAGA+GGG + chr1_1:3522328-3522347 Msa0001800:intron 40.0%
TCACATTAGGCACTACTTTC+AGG + chr1_1:3522676-3522695 Msa0001800:intron 40.0%
! CAGGTTGACAGTGAACTTAT+GGG - chr1_1:3522895-3522914 None:intergenic 40.0%
!! TCAGGTTGACAGTGAACTTA+TGG - chr1_1:3522896-3522915 None:intergenic 40.0%
TAGGCAGACAAATGCATATC+AGG - chr1_1:3522914-3522933 None:intergenic 40.0%
! AAGTTGATTCCTGGTATGGT+AGG - chr1_1:3522933-3522952 None:intergenic 40.0%
!! AAATCTAGTCTTGGATGGTG+TGG + chr1_1:3523292-3523311 Msa0001800:intron 40.0%
!! GAAGGCTTGTAAAAGCACTA+AGG + chr1_1:3523329-3523348 Msa0001800:intron 40.0%
!! GCTTGTAAAAGCACTAAGGA+GGG + chr1_1:3523333-3523352 Msa0001800:intron 40.0%
GGTTAACCAGATGGAGTATA+TGG + chr1_1:3523354-3523373 Msa0001800:intron 40.0%
GAGTATATGGTCCAAGGATT+AGG + chr1_1:3523367-3523386 Msa0001800:intron 40.0%
AGTGGCAATATCTTGATTGG+CGG - chr1_1:3523762-3523781 None:intergenic 40.0%
CAAGCCTGTAAGGAATTTCA+GGG + chr1_1:3523840-3523859 Msa0001800:intron 40.0%
AGGTGAAAGAACATTTGGAG+TGG + chr1_1:3523952-3523971 Msa0001800:intron 40.0%
GCGAAAATGAAGGTTCTTGA+AGG + chr1_1:3524132-3524151 Msa0001800:intron 40.0%
AAATGAAGGTTCTTGAAGGG+CGG + chr1_1:3524136-3524155 Msa0001800:intron 40.0%
TGGACATTTGGCGCATAAAA+TGG + chr1_1:3524284-3524303 Msa0001800:CDS 40.0%
GGACATTTGGCGCATAAAAT+GGG + chr1_1:3524285-3524304 Msa0001800:CDS 40.0%
TGGGATCAGAATATCTTGCT+AGG + chr1_1:3524304-3524323 Msa0001800:CDS 40.0%
! AGCATTTGGAGCAAGTTATC+AGG + chr1_1:3524468-3524487 Msa0001800:intron 40.0%
ATAGATCTCATTTCTGACCC+CGG - chr1_1:3524588-3524607 None:intergenic 40.0%
!! GTATTTAAAGAGCACCTGGA+TGG + chr1_1:3524734-3524753 Msa0001800:CDS 40.0%
! AGGACGTCTGAAATAGAAGT+TGG - chr1_1:3524882-3524901 None:intergenic 40.0%
AACTTCTATTTCAGACGTCC+TGG + chr1_1:3524881-3524900 Msa0001800:intron 40.0%
AAGGAAAGATGGCGATCAAA+GGG - chr1_1:3524965-3524984 None:intergenic 40.0%
TAAGGAAAGATGGCGATCAA+AGG - chr1_1:3524966-3524985 None:intergenic 40.0%
! CAGCTTCAGTGACAACTTTT+TGG - chr1_1:3524997-3525016 None:intergenic 40.0%
AAAGTTGTCACTGAAGCTGA+TGG + chr1_1:3524998-3525017 Msa0001800:CDS 40.0%
AAGTTGTCACTGAAGCTGAT+GGG + chr1_1:3524999-3525018 Msa0001800:CDS 40.0%
! GGGTCTATCAGCTATTTCAA+AGG + chr1_1:3525073-3525092 Msa0001800:CDS 40.0%
CAAGAAGATTACAGCATCCA+CGG - chr1_1:3525113-3525132 None:intergenic 40.0%
TATTCCTTGGTCTCATGTAG+TGG + chr1_1:3525182-3525201 Msa0001800:intron 40.0%
AATTCCACTACATGAGACCA+AGG - chr1_1:3525189-3525208 None:intergenic 40.0%
CAGTCTTTGTCATGATCAGA+TGG + chr1_1:3525317-3525336 Msa0001800:intron 40.0%
! ATTATGTGACGGAAAAGACG+AGG - chr1_1:3525420-3525439 None:intergenic 40.0%
! CCATATCTGGGATTATGTGA+CGG - chr1_1:3525431-3525450 None:intergenic 40.0%
CGTCACATAATCCCAGATAT+GGG + chr1_1:3525429-3525448 Msa0001800:intron 40.0%
!! ACTTCTGGAGCAAGGAAATT+AGG - chr1_1:3525467-3525486 None:intergenic 40.0%
! TTCTCCTACAAAGTGCCATA+AGG - chr1_1:3525583-3525602 None:intergenic 40.0%
! ACCTTGTGTTTTTCCTTCTC+TGG + chr1_1:3525650-3525669 Msa0001800:intron 40.0%
ACCAGAGAAGGAAAAACACA+AGG - chr1_1:3525654-3525673 None:intergenic 40.0%
AAGGGAAGAAAAACCAGAGA+AGG - chr1_1:3525666-3525685 None:intergenic 40.0%
CAATTGCAGAAACAGAGGTA+AGG + chr1_1:3525815-3525834 Msa0001800:intron 40.0%
! GGAACATTGATAACCAATGC+TGG - chr1_1:3525944-3525963 None:intergenic 40.0%
ACTGATGTTAGATGCCTTTC+AGG + chr1_1:3526036-3526055 Msa0001800:intron 40.0%
! GCAATGTCATTTGAAAGCGT+TGG - chr1_1:3526212-3526231 None:intergenic 40.0%
AAAGCAAGAAGACAGTTACG+CGG + chr1_1:3526270-3526289 Msa0001800:CDS 40.0%
GAACCAGAAAAGAACCCAAA+TGG + chr1_1:3526350-3526369 Msa0001800:CDS 40.0%
ATGGACCACCAAATTCAAAC+CGG + chr1_1:3526369-3526388 Msa0001800:CDS 40.0%
!!! CGCCGACAATAGTTTTGTTA+TGG - chr1_1:3526722-3526741 None:intergenic 40.0%
GATCCCAAGAACTATATGAC+GGG - chr1_1:3526761-3526780 None:intergenic 40.0%
!! CGCTTCCACTTGTTTTTCTA+AGG + chr1_1:3526981-3527000 Msa0001800:intron 40.0%
!! TCCACTTGTTTTTCTAAGGG+TGG + chr1_1:3526985-3527004 Msa0001800:intron 40.0%
!! CCACTTGTTTTTCTAAGGGT+GGG + chr1_1:3526986-3527005 Msa0001800:intron 40.0%
TGGCTTCTCTAACTTGACAA+TGG - chr1_1:3527205-3527224 None:intergenic 40.0%
!! TGTTCAAGTTGGAAAGAAGG+AGG + chr1_1:3527250-3527269 Msa0001800:CDS 40.0%
!! GAAGCATTGCAATGGTGATA+TGG - chr1_1:3527406-3527425 None:intergenic 40.0%
AGATAGTCAGGCACAACATT+AGG + chr1_1:3527765-3527784 Msa0001800:intron 40.0%
GATAGTCAGGCACAACATTA+GGG + chr1_1:3527766-3527785 Msa0001800:intron 40.0%
TTAGGGATTTCCTTGCTTGT+TGG + chr1_1:3527783-3527802 Msa0001800:intron 40.0%
CTGGTTGTATGATACACAGA+AGG + chr1_1:3527879-3527898 Msa0001800:intron 40.0%
CTTGTACAATTCAAGCCTCT+TGG - chr1_1:3527965-3527984 None:intergenic 40.0%
!! ACTCAGTGGCTTTATACACT+GGG - chr1_1:3528167-3528186 None:intergenic 40.0%
!! AACTCAGTGGCTTTATACAC+TGG - chr1_1:3528168-3528187 None:intergenic 40.0%
AATCACAACGTAGAACTCAG+TGG - chr1_1:3528181-3528200 None:intergenic 40.0%
CTAAAACGGTACAAGCTCGT+TGG - chr1_1:3519952-3519971 None:intergenic 45.0%
! CAACGAGCTTGTACCGTTTT+AGG + chr1_1:3519950-3519969 Msa0001800:CDS 45.0%
GTGGCGAAGGTTTATCTCTT+TGG + chr1_1:3519981-3520000 Msa0001800:CDS 45.0%
! CTGTAGACTTAGGTCTTGTG+TGG + chr1_1:3520261-3520280 Msa0001800:intron 45.0%
! GTGCATTGTATTGATCGGAG+TGG + chr1_1:3520699-3520718 Msa0001800:CDS 45.0%
!! TACAAGGTATTGTTACGCGG+AGG + chr1_1:3520782-3520801 Msa0001800:CDS 45.0%
TCATAAGACCGAAAATGGCC+AGG + chr1_1:3520822-3520841 Msa0001800:CDS 45.0%
GTGGCAGATTTAACCACTTG+TGG + chr1_1:3521082-3521101 Msa0001800:intron 45.0%
ATTGTGTCCATTGATCAGCG+TGG + chr1_1:3521224-3521243 Msa0001800:intron 45.0%
TTGTAAGCCACGCTGATCAA+TGG - chr1_1:3521234-3521253 None:intergenic 45.0%
ACGTTCTCTCATCCTTCTAC+TGG + chr1_1:3521675-3521694 Msa0001800:intron 45.0%
! GTTATTTCAACCAGGCTCTG+TGG + chr1_1:3521740-3521759 Msa0001800:intron 45.0%
TGCTTCGCAGTCTCAATGAT+TGG + chr1_1:3521816-3521835 Msa0001800:intron 45.0%
!! CAGTCTCAATGATTGGTCTC+TGG + chr1_1:3521823-3521842 Msa0001800:intron 45.0%
CGTTGTTGTGTCCTTCAGAT+AGG + chr1_1:3521920-3521939 Msa0001800:intron 45.0%
AATGCTAAGCCCCTATCTGA+AGG - chr1_1:3521934-3521953 None:intergenic 45.0%
AACAAAGAGTCGCGGAAAGA+GGG - chr1_1:3522119-3522138 None:intergenic 45.0%
AAACAAAGAGTCGCGGAAAG+AGG - chr1_1:3522120-3522139 None:intergenic 45.0%
! TTTCGGCTACTTTCACAGAG+GGG + chr1_1:3522329-3522348 Msa0001800:intron 45.0%
ATGGGTGACTGAGCAAATTG+TGG - chr1_1:3522877-3522896 None:intergenic 45.0%
ATTTGTCTGCCTACCATACC+AGG + chr1_1:3522921-3522940 Msa0001800:intron 45.0%
GGTTGTACGGAACTGAATGT+TGG + chr1_1:3523123-3523142 Msa0001800:intron 45.0%
!! GTGGTGGACATGATTAGAGA+AGG + chr1_1:3523311-3523330 Msa0001800:intron 45.0%
!! GGCTTGTAAAAGCACTAAGG+AGG + chr1_1:3523332-3523351 Msa0001800:intron 45.0%
ACTAAGGAGGGTTAACCAGA+TGG + chr1_1:3523345-3523364 Msa0001800:intron 45.0%
CTTGGACCATATACTCCATC+TGG - chr1_1:3523363-3523382 None:intergenic 45.0%
CAGATGGAGTATATGGTCCA+AGG + chr1_1:3523361-3523380 Msa0001800:intron 45.0%
CTCTCTCTACTCCTAATCCT+TGG - chr1_1:3523381-3523400 None:intergenic 45.0%
ATGTAACCGACCTTGCAAGT+GGG + chr1_1:3523475-3523494 Msa0001800:intron 45.0%
TACTTTCCCACTTGCAAGGT+CGG - chr1_1:3523484-3523503 None:intergenic 45.0%
GTGGCAATATCTTGATTGGC+GGG - chr1_1:3523761-3523780 None:intergenic 45.0%
GCAAAAGAAGTCGATCCTTC+AGG + chr1_1:3523800-3523819 Msa0001800:CDS 45.0%
GTGTAGACAGTCATACCTGA+AGG - chr1_1:3523818-3523837 None:intergenic 45.0%
GCAAGCCTGTAAGGAATTTC+AGG + chr1_1:3523839-3523858 Msa0001800:intron 45.0%
TGACGGCTCAAAAAGAAACG+TGG - chr1_1:3523898-3523917 None:intergenic 45.0%
TCGACATGATTGTTGCTCGA+AGG + chr1_1:3524226-3524245 Msa0001800:CDS 45.0%
CATGATTGTTGCTCGAAGGA+AGG + chr1_1:3524230-3524249 Msa0001800:CDS 45.0%
TGCGCCAAATGTCCATATTC+TGG - chr1_1:3524279-3524298 None:intergenic 45.0%
TCTTGCTAGGCTTCTATCTC+AGG + chr1_1:3524317-3524336 Msa0001800:CDS 45.0%
AATGCAGAGTTAGACCGCAT+TGG + chr1_1:3524542-3524561 Msa0001800:CDS 45.0%
!! TTTAAAGAGCACCTGGATGG+AGG + chr1_1:3524737-3524756 Msa0001800:CDS 45.0%
!! TTAAAGAGCACCTGGATGGA+GGG + chr1_1:3524738-3524757 Msa0001800:CDS 45.0%
TTCTATTTCAGACGTCCTGG+TGG + chr1_1:3524884-3524903 Msa0001800:intron 45.0%
TCTATTTCAGACGTCCTGGT+GGG + chr1_1:3524885-3524904 Msa0001800:intron 45.0%
AGTCTTCTATAACCCTGCTC+TGG - chr1_1:3525046-3525065 None:intergenic 45.0%
AAGAAAGCAAGTGGGTGTGA+AGG - chr1_1:3525250-3525269 None:intergenic 45.0%
CCGTCACATAATCCCAGATA+TGG + chr1_1:3525428-3525447 Msa0001800:intron 45.0%
TCCTGAAGTTGGAATCCTGT+AGG + chr1_1:3525522-3525541 Msa0001800:intron 45.0%
! CCTACAAAGTGCCATAAGGT+AGG - chr1_1:3525579-3525598 None:intergenic 45.0%
CCTACCTTATGGCACTTTGT+AGG + chr1_1:3525576-3525595 Msa0001800:intron 45.0%
GTAGGAGAAGTTACTTCCCA+TGG + chr1_1:3525594-3525613 Msa0001800:intron 45.0%
ATAGACGTGCATGTTGGATG+AGG + chr1_1:3525887-3525906 Msa0001800:intron 45.0%
! ATTGATAACCAATGCTGGCG+CGG - chr1_1:3525939-3525958 None:intergenic 45.0%
! TGTGATACTTCTTGGTGTGC+AGG + chr1_1:3526172-3526191 Msa0001800:intron 45.0%
ATCCAGTGCTTCATTTGCAG+CGG - chr1_1:3526237-3526256 None:intergenic 45.0%
CTGTCTTCTTGCTTTCGTCT+CGG - chr1_1:3526265-3526284 None:intergenic 45.0%
!! GGTCCATTTGGGTTCTTTTC+TGG - chr1_1:3526356-3526375 None:intergenic 45.0%
! GCATTCCGGTTTGAATTTGG+TGG - chr1_1:3526377-3526396 None:intergenic 45.0%
! GGAGCATTCCGGTTTGAATT+TGG - chr1_1:3526380-3526399 None:intergenic 45.0%
ATTACGTACCAATCTTGCGG+AGG - chr1_1:3526433-3526452 None:intergenic 45.0%
! CAGGACTTGTTTGGTTGGAA+TGG + chr1_1:3526503-3526522 Msa0001800:intron 45.0%
AATCTATGAAGCTCCTGCTG+AGG + chr1_1:3526673-3526692 Msa0001800:intron 45.0%
CCCACCCTTAGAAAAACAAG+TGG - chr1_1:3526989-3527008 None:intergenic 45.0%
!!! TGACAATGGACTACGGCTTT+TGG - chr1_1:3527191-3527210 None:intergenic 45.0%
ATATCGCACACAAGTGCGTT+AGG - chr1_1:3527450-3527469 None:intergenic 45.0%
ACATTCTGCTCCAACAAGCA+AGG - chr1_1:3527796-3527815 None:intergenic 45.0%
!! TAGAGACGATATCGACTCTG+TGG + chr1_1:3527990-3528009 Msa0001800:CDS 45.0%
! GACTCTGTGGCTTGGAAATA+GGG + chr1_1:3528003-3528022 Msa0001800:CDS 45.0%
!!! TTATTTTTTTAAAAAAAACT+CGG - chr1_1:3520237-3520256 None:intergenic 5.0%
!! TTAATAATATCAATTAATAA+TGG - chr1_1:3521030-3521049 None:intergenic 5.0%
!!! ATAAAATTTTTAAATAACTT+TGG - chr1_1:3522512-3522531 None:intergenic 5.0%
!! CAATAAATATTATTATATTA+TGG + chr1_1:3526604-3526623 Msa0001800:intron 5.0%
!! TACGAGTGTTGGTCTGCTGT+TGG + chr1_1:3519646-3519665 Msa0001800:five_prime_UTR 50.0%
!! ACCGTTTTAGGTGATCACGG+TGG + chr1_1:3519962-3519981 Msa0001800:CDS 50.0%
GCCACCGTGATCACCTAAAA+CGG - chr1_1:3519966-3519985 None:intergenic 50.0%
GGAAGAGACTTTCTTCCTCG+TGG + chr1_1:3520076-3520095 Msa0001800:CDS 50.0%
GACTTTCTTCCTCGTGGATC+TGG + chr1_1:3520082-3520101 Msa0001800:CDS 50.0%
CAATGCACAACACCCCTTCA+TGG - chr1_1:3520687-3520706 None:intergenic 50.0%
AGCAGCTGCATGGGCATTAA+AGG - chr1_1:3521309-3521328 None:intergenic 50.0%
!! TCAATTTTGGCCACAGAGCC+TGG - chr1_1:3521753-3521772 None:intergenic 50.0%
TGAATCTGCGCTCTCCTTGT+TGG + chr1_1:3522048-3522067 Msa0001800:intron 50.0%
GAATCTGCGCTCTCCTTGTT+GGG + chr1_1:3522049-3522068 Msa0001800:intron 50.0%
CGCTCTCCTTGTTGGGAAAT+GGG + chr1_1:3522056-3522075 Msa0001800:intron 50.0%
CAGCCCAGGAAGATCTATGA+GGG - chr1_1:3522199-3522218 None:intergenic 50.0%
TCAGCCCAGGAAGATCTATG+AGG - chr1_1:3522200-3522219 None:intergenic 50.0%
AGATCTTCCTGGGCTGACAA+AGG + chr1_1:3522203-3522222 Msa0001800:CDS 50.0%
GGTCCGTTCGTATGTTGAGA+AGG + chr1_1:3522387-3522406 Msa0001800:CDS 50.0%
!! TCTAGTCTTGGATGGTGTGG+TGG + chr1_1:3523295-3523314 Msa0001800:intron 50.0%
CACTTGCAAGGTCGGTTACA+TGG - chr1_1:3523476-3523495 None:intergenic 50.0%
CATGTAACCGACCTTGCAAG+TGG + chr1_1:3523474-3523493 Msa0001800:intron 50.0%
! GAGGTACTTTCCCACTTGCA+AGG - chr1_1:3523488-3523507 None:intergenic 50.0%
ATCTTGATTGGCGGGAGAGA+TGG - chr1_1:3523753-3523772 None:intergenic 50.0%
GTCTACACTGCAAGCCTGTA+AGG + chr1_1:3523830-3523849 Msa0001800:intron 50.0%
TTCTTGAAGGGCGGCAATAC+AGG + chr1_1:3524145-3524164 Msa0001800:CDS 50.0%
AATACAGGCTGCAGCATCCA+TGG + chr1_1:3524160-3524179 Msa0001800:CDS 50.0%
ATACAGGCTGCAGCATCCAT+GGG + chr1_1:3524161-3524180 Msa0001800:CDS 50.0%
CGGTTCACAATTCCAACCCA+TGG - chr1_1:3524180-3524199 None:intergenic 50.0%
CTATTTCAGACGTCCTGGTG+GGG + chr1_1:3524886-3524905 Msa0001800:intron 50.0%
!! TGCTCTGGAGCAATCAGATG+AGG - chr1_1:3525031-3525050 None:intergenic 50.0%
TCATCTGATTGCTCCAGAGC+AGG + chr1_1:3525030-3525049 Msa0001800:CDS 50.0%
CATCTGATTGCTCCAGAGCA+GGG + chr1_1:3525031-3525050 Msa0001800:CDS 50.0%
GAAGATTACAGCATCCACGG+AGG - chr1_1:3525110-3525129 None:intergenic 50.0%
AAATCGAGCAGCAGGACTTC+TGG - chr1_1:3525482-3525501 None:intergenic 50.0%
GCCTACAGGATTCCAACTTC+AGG - chr1_1:3525526-3525545 None:intergenic 50.0%
GGAGAAGTTACTTCCCATGG+TGG + chr1_1:3525597-3525616 Msa0001800:intron 50.0%
TAATTCATCCGCGCCAGCAT+TGG + chr1_1:3525928-3525947 Msa0001800:intron 50.0%
!! CTGATTCTTTTGGGGAGGGA+TGG + chr1_1:3526108-3526127 Msa0001800:intron 50.0%
!! ATTCTTTTGGGGAGGGATGG+AGG + chr1_1:3526111-3526130 Msa0001800:intron 50.0%
AACCGCTGCAAATGAAGCAC+TGG + chr1_1:3526232-3526251 Msa0001800:CDS 50.0%
! AGTTACGCGGCTGGTTGATA+TGG + chr1_1:3526283-3526302 Msa0001800:CDS 50.0%
GACAATCACCTCCGCAAGAT+TGG + chr1_1:3526422-3526441 Msa0001800:CDS 50.0%
TTCTTGAACTCCACCTCAGC+AGG - chr1_1:3526689-3526708 None:intergenic 50.0%
! GGAGAAATTGGGTGCCATGT+TGG + chr1_1:3527900-3527919 Msa0001800:CDS 50.0%
GGATGGGTCTTCATCCAACA+TGG - chr1_1:3527917-3527936 None:intergenic 50.0%
GGATGAAGACCCATCCCTAA+TGG + chr1_1:3527921-3527940 Msa0001800:CDS 50.0%
!! ACGATATCGACTCTGTGGCT+TGG + chr1_1:3527995-3528014 Msa0001800:CDS 50.0%
! CGACTCTGTGGCTTGGAAAT+AGG + chr1_1:3528002-3528021 Msa0001800:CDS 50.0%
GCGACGATGACGAGCTTGAT+CGG + chr1_1:3519911-3519930 Msa0001800:CDS 55.0%
TTAGGTGATCACGGTGGCGA+AGG + chr1_1:3519968-3519987 Msa0001800:CDS 55.0%
TGAACTCTGTCCACCGACGA+CGG - chr1_1:3520026-3520045 None:intergenic 55.0%
CACAACACCCCTTCATGGAG+TGG - chr1_1:3520682-3520701 None:intergenic 55.0%
CTTCCTCACAGCAGCTGCAT+GGG - chr1_1:3521318-3521337 None:intergenic 55.0%
GCGCTCTCCTTGTTGGGAAA+TGG + chr1_1:3522055-3522074 Msa0001800:intron 55.0%
ACTGCAACCTTTGTCAGCCC+AGG - chr1_1:3522213-3522232 None:intergenic 55.0%
GGGCTGACAAAGGTTGCAGT+AGG + chr1_1:3522213-3522232 Msa0001800:CDS 55.0%
TGGACGAGTAGTTGCGCACA+AGG + chr1_1:3523200-3523219 Msa0001800:intron 55.0%
AGTTGCGCACAAGGCAATGC+AGG + chr1_1:3523209-3523228 Msa0001800:intron 55.0%
CGCACAAGGCAATGCAGGAT+GGG + chr1_1:3523214-3523233 Msa0001800:intron 55.0%
! CAGAGTTAGACCGCATTGGC+AGG + chr1_1:3524546-3524565 Msa0001800:CDS 55.0%
! AGGCCGATTGCAGTGGATTC+CGG + chr1_1:3524566-3524585 Msa0001800:CDS 55.0%
ACCCCGGAATCCACTGCAAT+CGG - chr1_1:3524572-3524591 None:intergenic 55.0%
ACCTGGATGGAGGGTAAGTG+CGG + chr1_1:3524747-3524766 Msa0001800:intron 55.0%
!! TTTTGGGGAGGGATGGAGGA+GGG + chr1_1:3526115-3526134 Msa0001800:intron 55.0%
CAAGAAGACAGTTACGCGGC+TGG + chr1_1:3526274-3526293 Msa0001800:CDS 55.0%
!! CATTGTTGGGGGGAGCATTC+CGG - chr1_1:3526391-3526410 None:intergenic 55.0%
CTATGAAGCTCCTGCTGAGG+TGG + chr1_1:3526676-3526695 Msa0001800:intron 55.0%
GTCGTCGGTGGACAGAGTTC+AGG + chr1_1:3520025-3520044 Msa0001800:CDS 60.0%
TATTGTTACGCGGAGGCCGC+TGG + chr1_1:3520789-3520808 Msa0001800:CDS 60.0%
ATGCCCATGCAGCTGCTGTG+AGG + chr1_1:3521312-3521331 Msa0001800:intron 60.0%
CCTTCCTCACAGCAGCTGCA+TGG - chr1_1:3521319-3521338 None:intergenic 60.0%
CCATGCAGCTGCTGTGAGGA+AGG + chr1_1:3521316-3521335 Msa0001800:intron 60.0%
GCGCACAAGGCAATGCAGGA+TGG + chr1_1:3523213-3523232 Msa0001800:intron 60.0%
AGGCTGCAGCATCCATGGGT+TGG + chr1_1:3524165-3524184 Msa0001800:CDS 60.0%
CTGCAATCGGCCTGCCAATG+CGG - chr1_1:3524559-3524578 None:intergenic 60.0%
CATTGGCAGGCCGATTGCAG+TGG + chr1_1:3524559-3524578 Msa0001800:CDS 60.0%
! GGCCGATTGCAGTGGATTCC+GGG + chr1_1:3524567-3524586 Msa0001800:CDS 60.0%
! GCCGATTGCAGTGGATTCCG+GGG + chr1_1:3524568-3524587 Msa0001800:CDS 60.0%
ACCGCACTTACCCTCCATCC+AGG - chr1_1:3524751-3524770 None:intergenic 60.0%
CCTGGTGGGGACCGGATATA+CGG + chr1_1:3524899-3524918 Msa0001800:CDS 60.0%
CATCCACGGAGGCTTCTGCT+GGG - chr1_1:3525099-3525118 None:intergenic 60.0%
!! GCAGCAGGACTTCTGGAGCA+AGG - chr1_1:3525475-3525494 None:intergenic 60.0%
!! CTTTTGGGGAGGGATGGAGG+AGG + chr1_1:3526114-3526133 Msa0001800:intron 60.0%
CTTCCTTCCGTCGCCGTCGT+CGG + chr1_1:3520010-3520029 Msa0001800:CDS 65.0%
TCAGACGTCCTGGTGGGGAC+CGG + chr1_1:3524891-3524910 Msa0001800:intron 65.0%
CCGTATATCCGGTCCCCACC+AGG - chr1_1:3524902-3524921 None:intergenic 65.0%
GCATCCACGGAGGCTTCTGC+TGG - chr1_1:3525100-3525119 None:intergenic 65.0%
CTGTCCACCGACGACGGCGA+CGG - chr1_1:3520020-3520039 None:intergenic 70.0%
AGGCCCAGCAGAAGCCTCCG+TGG + chr1_1:3525093-3525112 Msa0001800:CDS 70.0%
CCACCGACGACGGCGACGGA+AGG - chr1_1:3520016-3520035 None:intergenic 75.0%
CCTTCCGTCGCCGTCGTCGG+TGG + chr1_1:3520013-3520032 Msa0001800:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 3519633 3528270 3519633 ID=Msa0001800;Name=Msa0001800
chr1_1 mRNA 3519633 3528270 3519633 ID=Msa0001800-mRNA-1;Parent=Msa0001800;Name=Msa0001800-mRNA-1;_AED=0.10;_eAED=0.10;_QI=275|0.92|0.93|1|1|1|15|247|648
chr1_1 exon 3519633 3520103 3519633 ID=Msa0001800-mRNA-1:exon:986;Parent=Msa0001800-mRNA-1
chr1_1 exon 3520692 3520892 3520692 ID=Msa0001800-mRNA-1:exon:987;Parent=Msa0001800-mRNA-1
chr1_1 exon 3521324 3521425 3521324 ID=Msa0001800-mRNA-1:exon:988;Parent=Msa0001800-mRNA-1
chr1_1 exon 3522184 3522234 3522184 ID=Msa0001800-mRNA-1:exon:989;Parent=Msa0001800-mRNA-1
chr1_1 exon 3522347 3522408 3522347 ID=Msa0001800-mRNA-1:exon:990;Parent=Msa0001800-mRNA-1
chr1_1 exon 3523731 3523821 3523731 ID=Msa0001800-mRNA-1:exon:991;Parent=Msa0001800-mRNA-1
chr1_1 exon 3523954 3524018 3523954 ID=Msa0001800-mRNA-1:exon:992;Parent=Msa0001800-mRNA-1
chr1_1 exon 3524144 3524338 3524144 ID=Msa0001800-mRNA-1:exon:993;Parent=Msa0001800-mRNA-1
chr1_1 exon 3524470 3524589 3524470 ID=Msa0001800-mRNA-1:exon:994;Parent=Msa0001800-mRNA-1
chr1_1 exon 3524689 3524759 3524689 ID=Msa0001800-mRNA-1:exon:995;Parent=Msa0001800-mRNA-1
chr1_1 exon 3524895 3525120 3524895 ID=Msa0001800-mRNA-1:exon:996;Parent=Msa0001800-mRNA-1
chr1_1 exon 3525781 3525831 3525781 ID=Msa0001800-mRNA-1:exon:997;Parent=Msa0001800-mRNA-1
chr1_1 exon 3526194 3526443 3526194 ID=Msa0001800-mRNA-1:exon:998;Parent=Msa0001800-mRNA-1
chr1_1 exon 3527132 3527271 3527132 ID=Msa0001800-mRNA-1:exon:999;Parent=Msa0001800-mRNA-1
chr1_1 exon 3527898 3528270 3527898 ID=Msa0001800-mRNA-1:exon:1000;Parent=Msa0001800-mRNA-1
chr1_1 five_prime_UTR 3519633 3519907 3519633 ID=Msa0001800-mRNA-1:five_prime_utr;Parent=Msa0001800-mRNA-1
chr1_1 CDS 3519908 3520103 3519908 ID=Msa0001800-mRNA-1:cds;Parent=Msa0001800-mRNA-1
chr1_1 CDS 3520692 3520892 3520692 ID=Msa0001800-mRNA-1:cds;Parent=Msa0001800-mRNA-1
chr1_1 CDS 3521324 3521425 3521324 ID=Msa0001800-mRNA-1:cds;Parent=Msa0001800-mRNA-1
chr1_1 CDS 3522184 3522234 3522184 ID=Msa0001800-mRNA-1:cds;Parent=Msa0001800-mRNA-1
chr1_1 CDS 3522347 3522408 3522347 ID=Msa0001800-mRNA-1:cds;Parent=Msa0001800-mRNA-1
chr1_1 CDS 3523731 3523821 3523731 ID=Msa0001800-mRNA-1:cds;Parent=Msa0001800-mRNA-1
chr1_1 CDS 3523954 3524018 3523954 ID=Msa0001800-mRNA-1:cds;Parent=Msa0001800-mRNA-1
chr1_1 CDS 3524144 3524338 3524144 ID=Msa0001800-mRNA-1:cds;Parent=Msa0001800-mRNA-1
chr1_1 CDS 3524470 3524589 3524470 ID=Msa0001800-mRNA-1:cds;Parent=Msa0001800-mRNA-1
chr1_1 CDS 3524689 3524759 3524689 ID=Msa0001800-mRNA-1:cds;Parent=Msa0001800-mRNA-1
chr1_1 CDS 3524895 3525120 3524895 ID=Msa0001800-mRNA-1:cds;Parent=Msa0001800-mRNA-1
chr1_1 CDS 3525781 3525831 3525781 ID=Msa0001800-mRNA-1:cds;Parent=Msa0001800-mRNA-1
chr1_1 CDS 3526194 3526443 3526194 ID=Msa0001800-mRNA-1:cds;Parent=Msa0001800-mRNA-1
chr1_1 CDS 3527132 3527271 3527132 ID=Msa0001800-mRNA-1:cds;Parent=Msa0001800-mRNA-1
chr1_1 CDS 3527898 3528023 3527898 ID=Msa0001800-mRNA-1:cds;Parent=Msa0001800-mRNA-1
chr1_1 three_prime_UTR 3528024 3528270 3528024 ID=Msa0001800-mRNA-1:three_prime_utr;Parent=Msa0001800-mRNA-1
Gene Sequence

>Msa0001800

ATGGCGACGATGACGAGCTTGATCGGTCTTATTAACAAGATCCAACGAGCTTGTACCGTTTTAGGTGATCACGGTGGCGAAGGTTTATCTCTTTGGGAAGCTCTTCCTTCCGTCGCCGTCGTCGGTGGACAGAGTTCAGGAAAATCCTCTGTCTTGGAAAGTGTTGTTGGAAGAGACTTTCTTCCTCGTGGATCTGGGGTGTTGTGCATTGTATTGATCGGAGTGGAAGATTCTATTGTTTTTGCATTTCTGAATGAATGGCTTTTTGATGTTGTCTTTCATTATTTACAAGGTATTGTTACGCGGAGGCCGCTGGTACTGCAACTTCATAAGACCGAAAATGGCCAGGAATATGCTGAGTTTCTTCACTTGCCAAGAAAGAGATTCACCGACTTCGCTGCTGTGAGGAAGGAAATAGCAGATGAAACAGATCGAATAACTGGGAAGTCAAAGCAAATTTCAAACATTCCTATTCAACTCAGCATTTATTCTCCAAATGTTGTAAACTTAACCCTCATAGATCTTCCTGGGCTGACAAAGGTTGCAGTAGAGGGGCAACAAGAGAGTATTGTTCAAGATATTGAACAAATGGTCCGTTCGTATGTTGAGAAGCCGAACTGCATTATCTTAGCCATCTCTCCCGCCAATCAAGATATTGCCACTTCAGATGCCATAAAAATTGCAAAAGAAGTCGATCCTTCAGGTGAAAGAACATTTGGAGTGGTTACAAAACTTGATCTTATGGATAAAGGAACTAATGCAGTTGATGTTCTTGAAGGGCGGCAATACAGGCTGCAGCATCCATGGGTTGGAATTGTGAACCGTTCACAAGCTGATATTAATAAAAATGTCGACATGATTGTTGCTCGAAGGAAGGAACGTGAATATTTTGAGACAAGTCCAGAATATGGACATTTGGCGCATAAAATGGGATCAGAATATCTTGCTAGGCTTCTATCTCAGCATTTGGAGCAAGTTATCAGGCAGAAGATACCTAGTATCATTGCCTTAATAAACAAGACAATTGATGAGCTTAATGCAGAGTTAGACCGCATTGGCAGGCCGATTGCAGTGGATTCCGGGGCCCAACTATACACCATTTTAGAAATGTGTCGTGCATTTGATAAAGTATTTAAAGAGCACCTGGATGGAGGACGTCCTGGTGGGGACCGGATATACGGAGTTTTTGATCACCAATTACCGGCTGCTTTAAAAAAACTTCCCTTTGATCGCCATCTTTCCTTAAAAAATGTCCAAAAAGTTGTCACTGAAGCTGATGGGTATCAACCTCATCTGATTGCTCCAGAGCAGGGTTATAGAAGACTCATTGAAGGGTCTATCAGCTATTTCAAAGGCCCAGCAGAAGCCTCCGTGGATGCTGTCCATTTTGTTTTGAAGGAACTTGTACGTAAGTCAATTGCAGAAACAGAGGAGTTAAGAAGATTTCCAACGCTTTCAAATGACATTGCAACCGCTGCAAATGAAGCACTGGATAAATTCCGAGACGAAAGCAAGAAGACAGTTACGCGGCTGGTTGATATGGAGTCTAGCTATCTAACAGCAGAATTCTTTAGGAAGATTCATCTTGAACCAGAAAAGAACCCAAATGGACCACCAAATTCAAACCGGAATGCTCCCCCCAACAATGATAATTTTACTGACAATCACCTCCGCAAGATTGGATCAAATGTAAGTGCTTATATCAATATGGTCTGTGATACACTCAAGAATACTATACCAAAAGCCGTAGTCCATTGTCAAGTTAGAGAAGCCAAGAGATCATTGCTAAACTACTTTTATGTTCAAGTTGGAAAGAAGGAGAAGGAGAAATTGGGTGCCATGTTGGATGAAGACCCATCCCTAATGGAAAAGAGAAATCAAATAGCCAAGAGGCTTGAATTGTACAAGCAAGCTAGAGACGATATCGACTCTGTGGCTTGGAAATAG
Protein sequence

>Msa0001800

MATMTSLIGLINKIQRACTVLGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGVLCIVLIGVEDSIVFAFLNEWLFDVVFHYLQGIVTRRPLVLQLHKTENGQEYAEFLHLPRKRFTDFAAVRKEIADETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQQESIVQDIEQMVRSYVEKPNCIILAISPANQDIATSDAIKIAKEVDPSGERTFGVVTKLDLMDKGTNAVDVLEGRQYRLQHPWVGIVNRSQADINKNVDMIVARRKEREYFETSPEYGHLAHKMGSEYLARLLSQHLEQVIRQKIPSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFKEHLDGGRPGGDRIYGVFDHQLPAALKKLPFDRHLSLKNVQKVVTEADGYQPHLIAPEQGYRRLIEGSISYFKGPAEASVDAVHFVLKELVRKSIAETEELRRFPTLSNDIATAANEALDKFRDESKKTVTRLVDMESSYLTAEFFRKIHLEPEKNPNGPPNSNRNAPPNNDNFTDNHLRKIGSNVSAYINMVCDTLKNTIPKAVVHCQVREAKRSLLNYFYVQVGKKEKEKLGAMLDEDPSLMEKRNQIAKRLELYKQARDDIDSVAWK*