Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615130 | RHN79520.1 | 41.867 | 707 | 323 | 16 | 1 | 632 | 1 | 694 | 1.12e-161 | 490 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0615130 | Msa0792290 | 0.825782 | 3.884476e-54 | -8.615850e-47 |
| Msa0615130 | Msa0997080 | 0.800189 | 1.619412e-48 | -8.615850e-47 |
| Msa0615130 | Msa1079100 | 0.834789 | 2.445495e-56 | -8.615850e-47 |
| Msa0615130 | Msa1116990 | 0.803407 | 3.538703e-49 | -8.615850e-47 |
| Msa0615130 | Msa1124010 | 0.855872 | 4.713292e-62 | -8.615850e-47 |
| Msa0615130 | Msa1177160 | 0.813812 | 2.117924e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615130 | MtrunA17_Chr1g0178241 | 41.867 | 707 | 323 | 16 | 1 | 632 | 1 | 694 | 1.03e-165 | 490 |
| Msa0615130 | MtrunA17_Chr7g0229881 | 42.857 | 413 | 188 | 10 | 1 | 395 | 1 | 383 | 1.47e-108 | 332 |
| Msa0615130 | MtrunA17_Chr7g0271301 | 49.624 | 266 | 120 | 3 | 3 | 267 | 6 | 258 | 1.95e-94 | 293 |
| Msa0615130 | MtrunA17_Chr5g0441151 | 51.741 | 201 | 91 | 3 | 72 | 266 | 12 | 212 | 2.21e-67 | 224 |
| Msa0615130 | MtrunA17_Chr7g0229821 | 53.165 | 158 | 66 | 3 | 1 | 158 | 1 | 150 | 5.28e-55 | 184 |
| Msa0615130 | MtrunA17_Chr5g0439091 | 68.421 | 114 | 36 | 0 | 132 | 245 | 1 | 114 | 1.18e-54 | 181 |
| Msa0615130 | MtrunA17_Chr7g0243381 | 39.571 | 326 | 149 | 8 | 256 | 574 | 2 | 286 | 2.15e-52 | 182 |
| Msa0615130 | MtrunA17_Chr7g0235231 | 40.969 | 227 | 124 | 4 | 112 | 334 | 43 | 263 | 4.34e-52 | 183 |
| Msa0615130 | MtrunA17_Chr3g0081461 | 58.824 | 119 | 49 | 0 | 56 | 174 | 1 | 119 | 1.08e-41 | 147 |
| Msa0615130 | MtrunA17_Chr1g0171991 | 48.905 | 137 | 70 | 0 | 129 | 265 | 27 | 163 | 1.57e-38 | 148 |
| Msa0615130 | MtrunA17_Chr6g0448801 | 52.239 | 67 | 32 | 0 | 117 | 183 | 22 | 88 | 9.98e-20 | 84.3 |
| Msa0615130 | MtrunA17_Chr3g0108131 | 33.333 | 186 | 100 | 4 | 432 | 594 | 38 | 222 | 1.15e-17 | 82.8 |
| Msa0615130 | MtrunA17_Chr4g0045501 | 39.888 | 178 | 84 | 5 | 473 | 628 | 15 | 191 | 1.62e-17 | 81.3 |
| Msa0615130 | MtrunA17_Chr4g0053771 | 29.968 | 317 | 175 | 9 | 340 | 628 | 28 | 325 | 8.05e-17 | 82.0 |
| Msa0615130 | MtrunA17_Chr4g0055681 | 32.127 | 221 | 127 | 4 | 361 | 570 | 33 | 241 | 3.79e-13 | 69.7 |
| Msa0615130 | MtrunA17_Chr6g0467481 | 26.121 | 379 | 205 | 18 | 230 | 576 | 1 | 336 | 6.26e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615130 | AT2G01050.1 | 31.884 | 207 | 130 | 3 | 91 | 297 | 88 | 283 | 6.97e-22 | 100 |
Find 191 sgRNAs with CRISPR-Local
Find 420 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAAGCTTACCCAAGATTT+TGG | 0.174399 | 4_2:-64524674 | None:intergenic |
| TCATTGAGAAACTATATTAT+TGG | 0.197592 | 4_2:-64524935 | None:intergenic |
| TGTTTCAATTGGTTTGGTTT+TGG | 0.198332 | 4_2:+64524510 | Msa0615130:CDS |
| TTTGAGATTGCTTCTGGTTT+GGG | 0.214809 | 4_2:+64523605 | Msa0615130:CDS |
| TTTGATAGCCACATTCAATT+TGG | 0.221011 | 4_2:-64523837 | None:intergenic |
| GCGAAGGATTTGGTGGATTC+TGG | 0.227203 | 4_2:-64523125 | None:intergenic |
| ACTTCATCAGTGGTTGTTAT+TGG | 0.235706 | 4_2:-64524577 | None:intergenic |
| CTCAAACTCATGCTCAAGTA+TGG | 0.249584 | 4_2:+64523534 | Msa0615130:CDS |
| GACTGCTTCGCTTCTATTGC+TGG | 0.253512 | 4_2:+64523483 | Msa0615130:CDS |
| ACAACTCAAAATAGGAAGTT+TGG | 0.262791 | 4_2:+64523650 | Msa0615130:CDS |
| CTTCATCAGTGGTTGTTATT+GGG | 0.263501 | 4_2:-64524576 | None:intergenic |
| TAGATTTGCTCATGTCCTTT+TGG | 0.266915 | 4_2:-64524090 | None:intergenic |
| TATCCAATCATCCTTCTCTA+TGG | 0.279406 | 4_2:-64524305 | None:intergenic |
| CAAAATCTTGGGTAAGCTTT+GGG | 0.286723 | 4_2:+64524675 | Msa0615130:CDS |
| TGTGCTCATTGCAAGTCTTT+AGG | 0.296937 | 4_2:+64523794 | Msa0615130:CDS |
| TACATTTGTTTCAATTGGTT+TGG | 0.299266 | 4_2:+64524504 | Msa0615130:CDS |
| GTTGTTTCATCAATAGTTAA+TGG | 0.318307 | 4_2:-64523632 | None:intergenic |
| ATCCCTTTCCAAGAGGAATT+AGG | 0.327148 | 4_2:-64523385 | None:intergenic |
| TTGATGAAACAACTCAAAAT+AGG | 0.331187 | 4_2:+64523642 | Msa0615130:CDS |
| GGCGTGTCCATGGCCGTTTA+TGG | 0.331835 | 4_2:+64523049 | Msa0615130:CDS |
| AGGGCTACATTTGTTTCAAT+TGG | 0.336651 | 4_2:+64524499 | Msa0615130:CDS |
| AACAAAGGCATGACCAGAAC+TGG | 0.340366 | 4_2:+64523905 | Msa0615130:CDS |
| AGTTCTGCAAAGTTAAATTT+AGG | 0.341206 | 4_2:-64524159 | None:intergenic |
| TTTACCACTCATCCCAGTTC+TGG | 0.341771 | 4_2:-64523918 | None:intergenic |
| ATGGCCGTTTATGGCGGCTT+TGG | 0.343387 | 4_2:+64523058 | Msa0615130:CDS |
| ATCTGCACTTTGCCTTTGTC+AGG | 0.345891 | 4_2:-64524607 | None:intergenic |
| ACAACCACTGATGAAGTTCT+AGG | 0.347097 | 4_2:+64524583 | Msa0615130:CDS |
| TGAACCTACCTCAAGAATAC+TGG | 0.347704 | 4_2:+64523567 | Msa0615130:CDS |
| CAACTCAAAATAGGAAGTTT+GGG | 0.350716 | 4_2:+64523651 | Msa0615130:CDS |
| CATCAAAAGCACCAAAATCT+TGG | 0.350960 | 4_2:+64524663 | Msa0615130:CDS |
| CCAAAATCTTGGGTAAGCTT+TGG | 0.350968 | 4_2:+64524674 | Msa0615130:CDS |
| TTGAAGAAATGCGACAAGTC+TGG | 0.354547 | 4_2:+64523432 | Msa0615130:CDS |
| CTCACTTGCACAGGCCCATT+AGG | 0.358178 | 4_2:-64523860 | None:intergenic |
| CCTGGGGCCTCAGAGATTGT+GGG | 0.361577 | 4_2:-64524331 | None:intergenic |
| GCTTGCAGAACTCATCTTCA+TGG | 0.365661 | 4_2:+64523269 | Msa0615130:CDS |
| GAGAGCTTGAGCGAAGGATT+TGG | 0.366606 | 4_2:-64523135 | None:intergenic |
| ACCCGTTTCATATGCAGCTT+TGG | 0.367121 | 4_2:-64523240 | None:intergenic |
| AGAGATATAGTGTCAGCAAT+AGG | 0.370508 | 4_2:-64524439 | None:intergenic |
| CTATTCATGTGTCTGATAAT+AGG | 0.370550 | 4_2:+64524404 | Msa0615130:CDS |
| AATGGCCACACTTGAAGAAT+TGG | 0.376069 | 4_2:+64523360 | Msa0615130:CDS |
| TGCATCAGTGTTGTTGCCTT+GGG | 0.384234 | 4_2:-64524875 | None:intergenic |
| CTGCATCAGTGTTGTTGCCT+TGG | 0.384525 | 4_2:-64524876 | None:intergenic |
| CAAATCTACTCTGATTAATC+AGG | 0.387107 | 4_2:+64524105 | Msa0615130:CDS |
| TTCAAAGCTTGCGTTGTAAC+CGG | 0.393641 | 4_2:-64523320 | None:intergenic |
| TAGTAACACCAATAGACTTT+TGG | 0.395881 | 4_2:-64523883 | None:intergenic |
| CTGGGAGGGTGCCATTCCCC+AGG | 0.399430 | 4_2:+64524479 | Msa0615130:CDS |
| AGTTAATACCTGGTCAAAAC+TGG | 0.401258 | 4_2:+64524897 | Msa0615130:CDS |
| AACTGGGATGAGTGGTAAAC+AGG | 0.404541 | 4_2:+64523922 | Msa0615130:CDS |
| GCTTGCAGCAGTGGCCTGTT+TGG | 0.404841 | 4_2:-64524641 | None:intergenic |
| TGTCTGATTACCAGTCAAAC+TGG | 0.406841 | 4_2:-64523966 | None:intergenic |
| TCCTGGGGCCTCAGAGATTG+TGG | 0.409155 | 4_2:-64524332 | None:intergenic |
| AATGTGGCTATCAAACCTAA+TGG | 0.419647 | 4_2:+64523845 | Msa0615130:CDS |
| ATGCGACAAGTCTGGGCTCT+TGG | 0.422951 | 4_2:+64523440 | Msa0615130:CDS |
| TAAGCTTTGGGGAGATATAC+AGG | 0.423677 | 4_2:+64524687 | Msa0615130:CDS |
| TGGGAGATTCTGTTCGAATC+AGG | 0.424889 | 4_2:+64523213 | Msa0615130:CDS |
| AGCGAAGCAGTCCAGGTTTG+AGG | 0.431778 | 4_2:-64523472 | None:intergenic |
| TGCCTATACGCAGAGGCATC+AGG | 0.435398 | 4_2:-64524844 | None:intergenic |
| GGTTACAACGCAAGCTTTGA+AGG | 0.437405 | 4_2:+64523322 | Msa0615130:CDS |
| CTATTATCAGACACATGAAT+AGG | 0.439563 | 4_2:-64524403 | None:intergenic |
| ATCCCATAGAGAAGGATGAT+TGG | 0.441085 | 4_2:+64524302 | Msa0615130:CDS |
| CTAGTGCAGAGTGGCAATGC+TGG | 0.442509 | 4_2:+64524460 | Msa0615130:CDS |
| CAATAGAAGCGAAGCAGTCC+AGG | 0.443430 | 4_2:-64523479 | None:intergenic |
| AATTGGAGCCTAATTCCTCT+TGG | 0.445416 | 4_2:+64523377 | Msa0615130:CDS |
| ATGCAGACCACGGTCTTTGA+GGG | 0.445883 | 4_2:-64524370 | None:intergenic |
| ATAGGTTGCTCCACCAGATC+AGG | 0.446357 | 4_2:-64524535 | None:intergenic |
| TCGCTTCTATTGCTGGACTA+AGG | 0.447180 | 4_2:+64523490 | Msa0615130:CDS |
| GAGTCCAAAGCCGCCATAAA+CGG | 0.449381 | 4_2:-64523062 | None:intergenic |
| AAGTGGAGCATTGTCAGAAT+TGG | 0.450377 | 4_2:-64524746 | None:intergenic |
| ATCAAAAGCACCAAAATCTT+GGG | 0.461766 | 4_2:+64524664 | Msa0615130:CDS |
| GTTGTTATTGGGGTGATGAT+AGG | 0.463842 | 4_2:-64524565 | None:intergenic |
| ATCCAAAGCTGCATATGAAA+CGG | 0.467230 | 4_2:+64523238 | Msa0615130:CDS |
| GACACATGAATAGGCTTGCT+TGG | 0.467428 | 4_2:-64524394 | None:intergenic |
| AATGCAGACCACGGTCTTTG+AGG | 0.468061 | 4_2:-64524371 | None:intergenic |
| CACCTGATGCCTCTGCGTAT+AGG | 0.468538 | 4_2:+64524842 | Msa0615130:CDS |
| TGATCATGCTCTGTCCATCT+TGG | 0.469332 | 4_2:+64523745 | Msa0615130:CDS |
| GCTACCTCCGAAGGTTATCA+TGG | 0.470441 | 4_2:+64523193 | Msa0615130:CDS |
| TAATCAAAGAAGACAAAGAA+TGG | 0.472675 | 4_2:+64524000 | Msa0615130:CDS |
| TTCATCAGTGGTTGTTATTG+GGG | 0.477450 | 4_2:-64524575 | None:intergenic |
| GAGGGAAGATCCCCATCAAT+TGG | 0.478848 | 4_2:-64524232 | None:intergenic |
| CAGGCTGAATTTCATACTGC+TGG | 0.478977 | 4_2:+64524124 | Msa0615130:CDS |
| ATGTGGCTATCAAACCTAAT+GGG | 0.479788 | 4_2:+64523846 | Msa0615130:CDS |
| CATGGCAATTCCAGTTTGAC+TGG | 0.480226 | 4_2:+64523956 | Msa0615130:CDS |
| TCTCCCAGTATTCTTGAGGT+AGG | 0.482402 | 4_2:-64523571 | None:intergenic |
| AGCCTAATTCCTCTTGGAAA+GGG | 0.482543 | 4_2:+64523383 | Msa0615130:CDS |
| GGGGAGACTAGACCAATTGA+TGG | 0.484771 | 4_2:+64524220 | Msa0615130:CDS |
| TCCAAAGCTGCATATGAAAC+GGG | 0.485466 | 4_2:+64523239 | Msa0615130:CDS |
| GATCTCTGATGGTACCAAAC+AGG | 0.488645 | 4_2:+64524627 | Msa0615130:CDS |
| TGAAGAAATGCGACAAGTCT+GGG | 0.491875 | 4_2:+64523433 | Msa0615130:CDS |
| GAGATATAGTGTCAGCAATA+GGG | 0.491999 | 4_2:-64524438 | None:intergenic |
| TTGGGGTGATGATAGGATGC+AGG | 0.492158 | 4_2:-64524558 | None:intergenic |
| GAAGATTAACCCTTCACAAA+GGG | 0.493027 | 4_2:+64523291 | Msa0615130:CDS |
| AGCTTGAGCGAAGGATTTGG+TGG | 0.494946 | 4_2:-64523132 | None:intergenic |
| AGAGGCATCAGGTGCTTTAG+TGG | 0.496427 | 4_2:-64524833 | None:intergenic |
| GAGGAAGAACAAGTTATGAC+AGG | 0.501652 | 4_2:+64524199 | Msa0615130:CDS |
| CTCATCTCATGGCGTGTCCA+TGG | 0.501949 | 4_2:+64523039 | None:intergenic |
| CCTTCACAAAGGGGATTCTC+CGG | 0.506571 | 4_2:+64523301 | Msa0615130:CDS |
| AATTGAAACAAATGTAGCCC+TGG | 0.508189 | 4_2:-64524497 | None:intergenic |
| AGATGAGCATATCAGTTGTA+AGG | 0.511828 | 4_2:+64524270 | Msa0615130:CDS |
| TCTGAGATTATCTTTGCCAC+TGG | 0.515763 | 4_2:+64524769 | Msa0615130:CDS |
| TCTTCCCTCCCTCACTGTTG+AGG | 0.519360 | 4_2:+64524246 | Msa0615130:CDS |
| CTCCTTTGATCTGCTGAATG+AGG | 0.519510 | 4_2:+64524180 | Msa0615130:CDS |
| GGAGTCAGTCATTGAGGTTG+AGG | 0.520144 | 4_2:+64524048 | Msa0615130:CDS |
| ACAAATGTAGCCCTGGGGAA+TGG | 0.523665 | 4_2:-64524490 | None:intergenic |
| CGGAGAATCCCCTTTGTGAA+GGG | 0.526579 | 4_2:-64523300 | None:intergenic |
| GAATCTCCCATGATAACCTT+CGG | 0.528433 | 4_2:-64523200 | None:intergenic |
| AATCAAAGAAGACAAAGAAT+GGG | 0.530326 | 4_2:+64524001 | Msa0615130:CDS |
| GCCCCAGGAAAATTGAATGA+TGG | 0.532899 | 4_2:+64524346 | Msa0615130:CDS |
| TGTTTCTCCCAGTATTCTTG+AGG | 0.534364 | 4_2:-64523575 | None:intergenic |
| TTCCTCATTCAGCAGATCAA+AGG | 0.534708 | 4_2:-64524182 | None:intergenic |
| AGTTTGACTGGTAATCAGAC+AGG | 0.537664 | 4_2:+64523968 | Msa0615130:CDS |
| CAAGTGAGCCAAAAGTCTAT+TGG | 0.538206 | 4_2:+64523875 | Msa0615130:CDS |
| TGAGATATTACTCTCCCAAA+AGG | 0.538607 | 4_2:+64524075 | Msa0615130:CDS |
| GAACTCTGATAAGCACCAGC+TGG | 0.540537 | 4_2:+64524027 | Msa0615130:CDS |
| CCTCAATGACTGACTCCAGC+TGG | 0.541238 | 4_2:-64524042 | None:intergenic |
| GGCACTGTGAACCTCAAACC+TGG | 0.542101 | 4_2:+64523461 | Msa0615130:CDS |
| AATTCTTCAAGTGTGGCCAT+TGG | 0.542956 | 4_2:-64523358 | None:intergenic |
| ATCCAATCATCCTTCTCTAT+GGG | 0.543164 | 4_2:-64524304 | None:intergenic |
| ATCTTCCTCAACAGTGAGGG+AGG | 0.545259 | 4_2:-64524251 | None:intergenic |
| CTGGGGCCTCAGAGATTGTG+GGG | 0.548095 | 4_2:-64524330 | None:intergenic |
| GAGCCTAATTCCTCTTGGAA+AGG | 0.548422 | 4_2:+64523382 | Msa0615130:CDS |
| TGCCTCTGATGAGCAACTCA+TGG | 0.548764 | 4_2:+64523166 | Msa0615130:CDS |
| GCAAAGATAATCTCAGAAAG+TGG | 0.548886 | 4_2:-64524763 | None:intergenic |
| CTCATCTTCCTCAACAGTGA+GGG | 0.551084 | 4_2:-64524254 | None:intergenic |
| GGCGGCTTTGGACTCATCGG+TGG | 0.551809 | 4_2:+64523070 | Msa0615130:CDS |
| CAGTCAAACTGGAATTGCCA+TGG | 0.553642 | 4_2:-64523955 | None:intergenic |
| TAGTGCAGAGTGGCAATGCT+GGG | 0.553645 | 4_2:+64524461 | Msa0615130:CDS |
| CCGGAGAATCCCCTTTGTGA+AGG | 0.555965 | 4_2:-64523301 | None:intergenic |
| GGGAGACTAGACCAATTGAT+GGG | 0.559865 | 4_2:+64524221 | Msa0615130:CDS |
| ATTGAAACAAATGTAGCCCT+GGG | 0.560395 | 4_2:-64524496 | None:intergenic |
| TGGGAGGGTGCCATTCCCCA+GGG | 0.561355 | 4_2:+64524480 | Msa0615130:CDS |
| GCAGAGTGGCAATGCTGGGA+GGG | 0.561380 | 4_2:+64524465 | Msa0615130:CDS |
| TATGGCGGCTTTGGACTCAT+CGG | 0.563340 | 4_2:+64523067 | Msa0615130:CDS |
| GTCAGTCATTGAGGTTGAGG+AGG | 0.565516 | 4_2:+64524051 | Msa0615130:CDS |
| TCTATTGGTGTTACTAACAA+AGG | 0.565780 | 4_2:+64523890 | Msa0615130:CDS |
| TCAAACTCATGCTCAAGTAT+GGG | 0.567137 | 4_2:+64523535 | Msa0615130:CDS |
| CCCACAATCTCTGAGGCCCC+AGG | 0.575207 | 4_2:+64524331 | Msa0615130:CDS |
| TCCTTCGCTCAAGCTCTCTC+CGG | 0.576067 | 4_2:+64523140 | Msa0615130:CDS |
| ATCTTGTTCCAAATTGAATG+TGG | 0.576218 | 4_2:+64523829 | Msa0615130:CDS |
| GGCAAAGTGCAGATCTCTGA+TGG | 0.576640 | 4_2:+64524616 | Msa0615130:CDS |
| CCAGCTGGAGTCAGTCATTG+AGG | 0.578250 | 4_2:+64524042 | Msa0615130:CDS |
| AAAATCTTGGGTAAGCTTTG+GGG | 0.578420 | 4_2:+64524676 | Msa0615130:CDS |
| GAACCTACCTCAAGAATACT+GGG | 0.582637 | 4_2:+64523568 | Msa0615130:CDS |
| GTGTCCATGGCCGTTTATGG+CGG | 0.587017 | 4_2:+64523052 | Msa0615130:CDS |
| GCCGGAGAGAGCTTGAGCGA+AGG | 0.587809 | 4_2:-64523141 | None:intergenic |
| GAGGACAGATCCCATAGAGA+AGG | 0.589090 | 4_2:+64524294 | Msa0615130:CDS |
| TGAGAAAATGTTTGAGTCAG+TGG | 0.589756 | 4_2:+64523709 | Msa0615130:CDS |
| GAGGCATCAGGTGCTTTAGT+GGG | 0.594612 | 4_2:-64524832 | None:intergenic |
| TTGCTCATCAGAGGCAACGC+CGG | 0.595025 | 4_2:-64523159 | None:intergenic |
| GACTTCGCCACCATCGAGGT+TGG | 0.596208 | 4_2:-64523101 | None:intergenic |
| AAAGCCGCCATAAACGGCCA+TGG | 0.596696 | 4_2:-64523056 | None:intergenic |
| GTGATGATAGGATGCAGGAT+AGG | 0.600432 | 4_2:-64524553 | None:intergenic |
| AGCCATGAGTTGCTCATCAG+AGG | 0.600547 | 4_2:-64523168 | None:intergenic |
| TGAGTTTGAGCTTGTGCTTG+AGG | 0.600898 | 4_2:-64523521 | None:intergenic |
| AGGCTCCAATTCTTCAAGTG+TGG | 0.603962 | 4_2:-64523365 | None:intergenic |
| CTACCTCCGAAGGTTATCAT+GGG | 0.604137 | 4_2:+64523194 | Msa0615130:CDS |
| AGCATATCAGTTGTAAGGTG+AGG | 0.608562 | 4_2:+64524275 | Msa0615130:CDS |
| ATGACCAGAACTGGGATGAG+TGG | 0.612344 | 4_2:+64523914 | Msa0615130:CDS |
| GGTAATCAGACAGGTACTGT+TGG | 0.614462 | 4_2:+64523977 | Msa0615130:CDS |
| GGAAGATTAACCCTTCACAA+AGG | 0.615847 | 4_2:+64523290 | Msa0615130:CDS |
| TTCATGTGTCTGATAATAGG+AGG | 0.616438 | 4_2:+64524407 | Msa0615130:CDS |
| TGCAGACCACGGTCTTTGAG+GGG | 0.618653 | 4_2:-64524369 | None:intergenic |
| TCTTCCTCAACAGTGAGGGA+GGG | 0.622385 | 4_2:-64524250 | None:intergenic |
| GGACAAACGACCAACCTCGA+TGG | 0.623116 | 4_2:+64523091 | Msa0615130:CDS |
| CATGGCTCAGCTACCTCCGA+AGG | 0.623997 | 4_2:+64523184 | Msa0615130:CDS |
| AGGAAGAACAAGTTATGACA+GGG | 0.624307 | 4_2:+64524200 | Msa0615130:CDS |
| ACAAAGGCATGACCAGAACT+GGG | 0.629779 | 4_2:+64523906 | Msa0615130:CDS |
| AATAATATAGTTTCTCAATG+AGG | 0.634286 | 4_2:+64524937 | Msa0615130:CDS |
| TCAAAGAATCCCTTTCCAAG+AGG | 0.637578 | 4_2:-64523392 | None:intergenic |
| AAACAGGATACGAATGCCCA+TGG | 0.637948 | 4_2:+64523938 | Msa0615130:CDS |
| CAAACGACCAACCTCGATGG+TGG | 0.638158 | 4_2:+64523094 | Msa0615130:CDS |
| ACACTGATGCAGTTAATACC+TGG | 0.639336 | 4_2:+64524887 | Msa0615130:CDS |
| GTCTGACAATGACTCACAGA+TGG | 0.639802 | 4_2:+64524723 | Msa0615130:CDS |
| TCAGTCATTGAGGTTGAGGA+GGG | 0.640526 | 4_2:+64524052 | Msa0615130:CDS |
| AGTCAAACTGGAATTGCCAT+GGG | 0.641378 | 4_2:-64523954 | None:intergenic |
| TATAGGCACAACAAATCCCA+AGG | 0.650986 | 4_2:+64524859 | Msa0615130:CDS |
| AAGATTAACCCTTCACAAAG+GGG | 0.652255 | 4_2:+64523292 | Msa0615130:CDS |
| TGCAGAGTGGCAATGCTGGG+AGG | 0.667822 | 4_2:+64524464 | Msa0615130:CDS |
| AGGTCCTAGAACTTCATCAG+TGG | 0.676793 | 4_2:-64524587 | None:intergenic |
| GCTCATCTTCCTCAACAGTG+AGG | 0.677580 | 4_2:-64524255 | None:intergenic |
| TTTGTTGTGCCTATACGCAG+AGG | 0.682390 | 4_2:-64524851 | None:intergenic |
| CTTGCTTGGAATGCAGACCA+CGG | 0.692086 | 4_2:-64524380 | None:intergenic |
| TGATGGCCCCTCAAAGACCG+TGG | 0.692425 | 4_2:+64524363 | Msa0615130:CDS |
| GGAGACTAGACCAATTGATG+GGG | 0.703422 | 4_2:+64524222 | Msa0615130:CDS |
| GAAGTTCTAGGACCTGACAA+AGG | 0.705870 | 4_2:+64524595 | Msa0615130:CDS |
| TCTCCCATGATAACCTTCGG+AGG | 0.707548 | 4_2:-64523197 | None:intergenic |
| TGGAGACTTCGCCACCATCG+AGG | 0.711756 | 4_2:-64523105 | None:intergenic |
| GGAAGAACAAGTTATGACAG+GGG | 0.715437 | 4_2:+64524201 | Msa0615130:CDS |
| TTGCAATGAGCACAATACAG+AGG | 0.720952 | 4_2:-64523785 | None:intergenic |
| ACTATATCTCTAGTGCAGAG+TGG | 0.724049 | 4_2:+64524451 | Msa0615130:CDS |
| GATACACCCCACAATCTCTG+AGG | 0.728179 | 4_2:+64524324 | Msa0615130:CDS |
| TTGAAACAAATGTAGCCCTG+GGG | 0.755478 | 4_2:-64524495 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATTGAGAAACTATATTAT+TGG | - | chr4_2:64524938-64524957 | None:intergenic | 20.0% |
| !! | TCATTGAGAAACTATATTAT+TGG | - | chr4_2:64524938-64524957 | None:intergenic | 20.0% |
| !! | GTTGTTTCATCAATAGTTAA+TGG | - | chr4_2:64523635-64523654 | None:intergenic | 25.0% |
| ! | TTGATGAAACAACTCAAAAT+AGG | + | chr4_2:64523642-64523661 | Msa0615130:CDS | 25.0% |
| ! | TAATCAAAGAAGACAAAGAA+TGG | + | chr4_2:64524000-64524019 | Msa0615130:CDS | 25.0% |
| ! | AATCAAAGAAGACAAAGAAT+GGG | + | chr4_2:64524001-64524020 | Msa0615130:CDS | 25.0% |
| ! | AGTTCTGCAAAGTTAAATTT+AGG | - | chr4_2:64524162-64524181 | None:intergenic | 25.0% |
| ! | TACATTTGTTTCAATTGGTT+TGG | + | chr4_2:64524504-64524523 | Msa0615130:CDS | 25.0% |
| !! | GTTGTTTCATCAATAGTTAA+TGG | - | chr4_2:64523635-64523654 | None:intergenic | 25.0% |
| ! | TTGATGAAACAACTCAAAAT+AGG | + | chr4_2:64523642-64523661 | Msa0615130:CDS | 25.0% |
| ! | TAATCAAAGAAGACAAAGAA+TGG | + | chr4_2:64524000-64524019 | Msa0615130:CDS | 25.0% |
| ! | AATCAAAGAAGACAAAGAAT+GGG | + | chr4_2:64524001-64524020 | Msa0615130:CDS | 25.0% |
| ! | AGTTCTGCAAAGTTAAATTT+AGG | - | chr4_2:64524162-64524181 | None:intergenic | 25.0% |
| ! | TACATTTGTTTCAATTGGTT+TGG | + | chr4_2:64524504-64524523 | Msa0615130:CDS | 25.0% |
| ACAACTCAAAATAGGAAGTT+TGG | + | chr4_2:64523650-64523669 | Msa0615130:CDS | 30.0% | |
| CAACTCAAAATAGGAAGTTT+GGG | + | chr4_2:64523651-64523670 | Msa0615130:CDS | 30.0% | |
| ! | ACTCAAACATTTTCTCAGAT+AGG | - | chr4_2:64523706-64523725 | None:intergenic | 30.0% |
| ! | CTTTTCATATTGAACCAAGA+TGG | - | chr4_2:64523762-64523781 | None:intergenic | 30.0% |
| ATCTTGTTCCAAATTGAATG+TGG | + | chr4_2:64523829-64523848 | Msa0615130:CDS | 30.0% | |
| ! | TTTGATAGCCACATTCAATT+TGG | - | chr4_2:64523840-64523859 | None:intergenic | 30.0% |
| ! | TAGTAACACCAATAGACTTT+TGG | - | chr4_2:64523886-64523905 | None:intergenic | 30.0% |
| !! | TCTATTGGTGTTACTAACAA+AGG | + | chr4_2:64523890-64523909 | Msa0615130:CDS | 30.0% |
| CAAATCTACTCTGATTAATC+AGG | + | chr4_2:64524105-64524124 | Msa0615130:CDS | 30.0% | |
| CTATTATCAGACACATGAAT+AGG | - | chr4_2:64524406-64524425 | None:intergenic | 30.0% | |
| CTATTCATGTGTCTGATAAT+AGG | + | chr4_2:64524404-64524423 | Msa0615130:CDS | 30.0% | |
| !!! | TGTTTCAATTGGTTTGGTTT+TGG | + | chr4_2:64524510-64524529 | Msa0615130:CDS | 30.0% |
| !! | ATCAAAAGCACCAAAATCTT+GGG | + | chr4_2:64524664-64524683 | Msa0615130:CDS | 30.0% |
| ACAACTCAAAATAGGAAGTT+TGG | + | chr4_2:64523650-64523669 | Msa0615130:CDS | 30.0% | |
| CAACTCAAAATAGGAAGTTT+GGG | + | chr4_2:64523651-64523670 | Msa0615130:CDS | 30.0% | |
| ! | ACTCAAACATTTTCTCAGAT+AGG | - | chr4_2:64523706-64523725 | None:intergenic | 30.0% |
| ! | CTTTTCATATTGAACCAAGA+TGG | - | chr4_2:64523762-64523781 | None:intergenic | 30.0% |
| ATCTTGTTCCAAATTGAATG+TGG | + | chr4_2:64523829-64523848 | Msa0615130:CDS | 30.0% | |
| ! | TTTGATAGCCACATTCAATT+TGG | - | chr4_2:64523840-64523859 | None:intergenic | 30.0% |
| ! | TAGTAACACCAATAGACTTT+TGG | - | chr4_2:64523886-64523905 | None:intergenic | 30.0% |
| !! | TCTATTGGTGTTACTAACAA+AGG | + | chr4_2:64523890-64523909 | Msa0615130:CDS | 30.0% |
| CAAATCTACTCTGATTAATC+AGG | + | chr4_2:64524105-64524124 | Msa0615130:CDS | 30.0% | |
| CTATTATCAGACACATGAAT+AGG | - | chr4_2:64524406-64524425 | None:intergenic | 30.0% | |
| CTATTCATGTGTCTGATAAT+AGG | + | chr4_2:64524404-64524423 | Msa0615130:CDS | 30.0% | |
| !!! | TGTTTCAATTGGTTTGGTTT+TGG | + | chr4_2:64524510-64524529 | Msa0615130:CDS | 30.0% |
| !! | ATCAAAAGCACCAAAATCTT+GGG | + | chr4_2:64524664-64524683 | Msa0615130:CDS | 30.0% |
| ATCCAAAGCTGCATATGAAA+CGG | + | chr4_2:64523238-64523257 | Msa0615130:CDS | 35.0% | |
| GAAGATTAACCCTTCACAAA+GGG | + | chr4_2:64523291-64523310 | Msa0615130:CDS | 35.0% | |
| AAGATTAACCCTTCACAAAG+GGG | + | chr4_2:64523292-64523311 | Msa0615130:CDS | 35.0% | |
| AGGAAAAACTCAACTACCAA+TGG | + | chr4_2:64523342-64523361 | Msa0615130:CDS | 35.0% | |
| TCAAACTCATGCTCAAGTAT+GGG | + | chr4_2:64523535-64523554 | Msa0615130:CDS | 35.0% | |
| !!! | ACTCTTTTTGAGATTGCTTC+TGG | + | chr4_2:64523599-64523618 | Msa0615130:CDS | 35.0% |
| !!! | TTTTGAGATTGCTTCTGGTT+TGG | + | chr4_2:64523604-64523623 | Msa0615130:CDS | 35.0% |
| !! | TTTGAGATTGCTTCTGGTTT+GGG | + | chr4_2:64523605-64523624 | Msa0615130:CDS | 35.0% |
| TGAGAAAATGTTTGAGTCAG+TGG | + | chr4_2:64523709-64523728 | Msa0615130:CDS | 35.0% | |
| AATGTGGCTATCAAACCTAA+TGG | + | chr4_2:64523845-64523864 | Msa0615130:CDS | 35.0% | |
| ATGTGGCTATCAAACCTAAT+GGG | + | chr4_2:64523846-64523865 | Msa0615130:CDS | 35.0% | |
| TGAGATATTACTCTCCCAAA+AGG | + | chr4_2:64524075-64524094 | Msa0615130:CDS | 35.0% | |
| !! | AGATTTGCTCATGTCCTTTT+GGG | - | chr4_2:64524092-64524111 | None:intergenic | 35.0% |
| !! | TAGATTTGCTCATGTCCTTT+TGG | - | chr4_2:64524093-64524112 | None:intergenic | 35.0% |
| AGGAAGAACAAGTTATGACA+GGG | + | chr4_2:64524200-64524219 | Msa0615130:CDS | 35.0% | |
| AGATGAGCATATCAGTTGTA+AGG | + | chr4_2:64524270-64524289 | Msa0615130:CDS | 35.0% | |
| ATCCAATCATCCTTCTCTAT+GGG | - | chr4_2:64524307-64524326 | None:intergenic | 35.0% | |
| TATCCAATCATCCTTCTCTA+TGG | - | chr4_2:64524308-64524327 | None:intergenic | 35.0% | |
| TTCATGTGTCTGATAATAGG+AGG | + | chr4_2:64524407-64524426 | Msa0615130:CDS | 35.0% | |
| GAGATATAGTGTCAGCAATA+GGG | - | chr4_2:64524441-64524460 | None:intergenic | 35.0% | |
| AGAGATATAGTGTCAGCAAT+AGG | - | chr4_2:64524442-64524461 | None:intergenic | 35.0% | |
| ATTGAAACAAATGTAGCCCT+GGG | - | chr4_2:64524499-64524518 | None:intergenic | 35.0% | |
| AATTGAAACAAATGTAGCCC+TGG | - | chr4_2:64524500-64524519 | None:intergenic | 35.0% | |
| AGGGCTACATTTGTTTCAAT+TGG | + | chr4_2:64524499-64524518 | Msa0615130:CDS | 35.0% | |
| ! | TTCATCAGTGGTTGTTATTG+GGG | - | chr4_2:64524578-64524597 | None:intergenic | 35.0% |
| ! | CTTCATCAGTGGTTGTTATT+GGG | - | chr4_2:64524579-64524598 | None:intergenic | 35.0% |
| ACTTCATCAGTGGTTGTTAT+TGG | - | chr4_2:64524580-64524599 | None:intergenic | 35.0% | |
| !! | CATCAAAAGCACCAAAATCT+TGG | + | chr4_2:64524663-64524682 | Msa0615130:CDS | 35.0% |
| CAAAATCTTGGGTAAGCTTT+GGG | + | chr4_2:64524675-64524694 | Msa0615130:CDS | 35.0% | |
| AAAATCTTGGGTAAGCTTTG+GGG | + | chr4_2:64524676-64524695 | Msa0615130:CDS | 35.0% | |
| GCAAAGATAATCTCAGAAAG+TGG | - | chr4_2:64524766-64524785 | None:intergenic | 35.0% | |
| ATCTTTGCCACTGGAAAAAA+AGG | + | chr4_2:64524778-64524797 | Msa0615130:CDS | 35.0% | |
| TCTTTGCCACTGGAAAAAAA+GGG | + | chr4_2:64524779-64524798 | Msa0615130:CDS | 35.0% | |
| AGTTAATACCTGGTCAAAAC+TGG | + | chr4_2:64524897-64524916 | Msa0615130:CDS | 35.0% | |
| ATCCAAAGCTGCATATGAAA+CGG | + | chr4_2:64523238-64523257 | Msa0615130:CDS | 35.0% | |
| GAAGATTAACCCTTCACAAA+GGG | + | chr4_2:64523291-64523310 | Msa0615130:CDS | 35.0% | |
| AAGATTAACCCTTCACAAAG+GGG | + | chr4_2:64523292-64523311 | Msa0615130:CDS | 35.0% | |
| AGGAAAAACTCAACTACCAA+TGG | + | chr4_2:64523342-64523361 | Msa0615130:CDS | 35.0% | |
| TCAAACTCATGCTCAAGTAT+GGG | + | chr4_2:64523535-64523554 | Msa0615130:CDS | 35.0% | |
| !!! | ACTCTTTTTGAGATTGCTTC+TGG | + | chr4_2:64523599-64523618 | Msa0615130:CDS | 35.0% |
| !!! | TTTTGAGATTGCTTCTGGTT+TGG | + | chr4_2:64523604-64523623 | Msa0615130:CDS | 35.0% |
| !! | TTTGAGATTGCTTCTGGTTT+GGG | + | chr4_2:64523605-64523624 | Msa0615130:CDS | 35.0% |
| TGAGAAAATGTTTGAGTCAG+TGG | + | chr4_2:64523709-64523728 | Msa0615130:CDS | 35.0% | |
| AATGTGGCTATCAAACCTAA+TGG | + | chr4_2:64523845-64523864 | Msa0615130:CDS | 35.0% | |
| ATGTGGCTATCAAACCTAAT+GGG | + | chr4_2:64523846-64523865 | Msa0615130:CDS | 35.0% | |
| TGAGATATTACTCTCCCAAA+AGG | + | chr4_2:64524075-64524094 | Msa0615130:CDS | 35.0% | |
| !! | AGATTTGCTCATGTCCTTTT+GGG | - | chr4_2:64524092-64524111 | None:intergenic | 35.0% |
| !! | TAGATTTGCTCATGTCCTTT+TGG | - | chr4_2:64524093-64524112 | None:intergenic | 35.0% |
| AGGAAGAACAAGTTATGACA+GGG | + | chr4_2:64524200-64524219 | Msa0615130:CDS | 35.0% | |
| AGATGAGCATATCAGTTGTA+AGG | + | chr4_2:64524270-64524289 | Msa0615130:CDS | 35.0% | |
| ATCCAATCATCCTTCTCTAT+GGG | - | chr4_2:64524307-64524326 | None:intergenic | 35.0% | |
| TATCCAATCATCCTTCTCTA+TGG | - | chr4_2:64524308-64524327 | None:intergenic | 35.0% | |
| TTCATGTGTCTGATAATAGG+AGG | + | chr4_2:64524407-64524426 | Msa0615130:CDS | 35.0% | |
| GAGATATAGTGTCAGCAATA+GGG | - | chr4_2:64524441-64524460 | None:intergenic | 35.0% | |
| AGAGATATAGTGTCAGCAAT+AGG | - | chr4_2:64524442-64524461 | None:intergenic | 35.0% | |
| ATTGAAACAAATGTAGCCCT+GGG | - | chr4_2:64524499-64524518 | None:intergenic | 35.0% | |
| AATTGAAACAAATGTAGCCC+TGG | - | chr4_2:64524500-64524519 | None:intergenic | 35.0% | |
| AGGGCTACATTTGTTTCAAT+TGG | + | chr4_2:64524499-64524518 | Msa0615130:CDS | 35.0% | |
| ! | TTCATCAGTGGTTGTTATTG+GGG | - | chr4_2:64524578-64524597 | None:intergenic | 35.0% |
| ! | CTTCATCAGTGGTTGTTATT+GGG | - | chr4_2:64524579-64524598 | None:intergenic | 35.0% |
| ACTTCATCAGTGGTTGTTAT+TGG | - | chr4_2:64524580-64524599 | None:intergenic | 35.0% | |
| !! | CATCAAAAGCACCAAAATCT+TGG | + | chr4_2:64524663-64524682 | Msa0615130:CDS | 35.0% |
| CAAAATCTTGGGTAAGCTTT+GGG | + | chr4_2:64524675-64524694 | Msa0615130:CDS | 35.0% | |
| AAAATCTTGGGTAAGCTTTG+GGG | + | chr4_2:64524676-64524695 | Msa0615130:CDS | 35.0% | |
| GCAAAGATAATCTCAGAAAG+TGG | - | chr4_2:64524766-64524785 | None:intergenic | 35.0% | |
| ATCTTTGCCACTGGAAAAAA+AGG | + | chr4_2:64524778-64524797 | Msa0615130:CDS | 35.0% | |
| TCTTTGCCACTGGAAAAAAA+GGG | + | chr4_2:64524779-64524798 | Msa0615130:CDS | 35.0% | |
| AGTTAATACCTGGTCAAAAC+TGG | + | chr4_2:64524897-64524916 | Msa0615130:CDS | 35.0% | |
| GAATCTCCCATGATAACCTT+CGG | - | chr4_2:64523203-64523222 | None:intergenic | 40.0% | |
| TCCAAAGCTGCATATGAAAC+GGG | + | chr4_2:64523239-64523258 | Msa0615130:CDS | 40.0% | |
| GGAAGATTAACCCTTCACAA+AGG | + | chr4_2:64523290-64523309 | Msa0615130:CDS | 40.0% | |
| TTCAAAGCTTGCGTTGTAAC+CGG | - | chr4_2:64523323-64523342 | None:intergenic | 40.0% | |
| AATTCTTCAAGTGTGGCCAT+TGG | - | chr4_2:64523361-64523380 | None:intergenic | 40.0% | |
| AATGGCCACACTTGAAGAAT+TGG | + | chr4_2:64523360-64523379 | Msa0615130:CDS | 40.0% | |
| AATTGGAGCCTAATTCCTCT+TGG | + | chr4_2:64523377-64523396 | Msa0615130:CDS | 40.0% | |
| AGCCTAATTCCTCTTGGAAA+GGG | + | chr4_2:64523383-64523402 | Msa0615130:CDS | 40.0% | |
| ATCCCTTTCCAAGAGGAATT+AGG | - | chr4_2:64523388-64523407 | None:intergenic | 40.0% | |
| TCAAAGAATCCCTTTCCAAG+AGG | - | chr4_2:64523395-64523414 | None:intergenic | 40.0% | |
| TTGAAGAAATGCGACAAGTC+TGG | + | chr4_2:64523432-64523451 | Msa0615130:CDS | 40.0% | |
| TGAAGAAATGCGACAAGTCT+GGG | + | chr4_2:64523433-64523452 | Msa0615130:CDS | 40.0% | |
| CTCAAACTCATGCTCAAGTA+TGG | + | chr4_2:64523534-64523553 | Msa0615130:CDS | 40.0% | |
| TGAACCTACCTCAAGAATAC+TGG | + | chr4_2:64523567-64523586 | Msa0615130:CDS | 40.0% | |
| GAACCTACCTCAAGAATACT+GGG | + | chr4_2:64523568-64523587 | Msa0615130:CDS | 40.0% | |
| TGTTTCTCCCAGTATTCTTG+AGG | - | chr4_2:64523578-64523597 | None:intergenic | 40.0% | |
| TTGCAATGAGCACAATACAG+AGG | - | chr4_2:64523788-64523807 | None:intergenic | 40.0% | |
| TGTGCTCATTGCAAGTCTTT+AGG | + | chr4_2:64523794-64523813 | Msa0615130:CDS | 40.0% | |
| CAAGTGAGCCAAAAGTCTAT+TGG | + | chr4_2:64523875-64523894 | Msa0615130:CDS | 40.0% | |
| AGTCAAACTGGAATTGCCAT+GGG | - | chr4_2:64523957-64523976 | None:intergenic | 40.0% | |
| TGTCTGATTACCAGTCAAAC+TGG | - | chr4_2:64523969-64523988 | None:intergenic | 40.0% | |
| AGTTTGACTGGTAATCAGAC+AGG | + | chr4_2:64523968-64523987 | Msa0615130:CDS | 40.0% | |
| TTCCTCATTCAGCAGATCAA+AGG | - | chr4_2:64524185-64524204 | None:intergenic | 40.0% | |
| GAGGAAGAACAAGTTATGAC+AGG | + | chr4_2:64524199-64524218 | Msa0615130:CDS | 40.0% | |
| GGAAGAACAAGTTATGACAG+GGG | + | chr4_2:64524201-64524220 | Msa0615130:CDS | 40.0% | |
| AGCATATCAGTTGTAAGGTG+AGG | + | chr4_2:64524275-64524294 | Msa0615130:CDS | 40.0% | |
| ATCCCATAGAGAAGGATGAT+TGG | + | chr4_2:64524302-64524321 | Msa0615130:CDS | 40.0% | |
| ! | GCCATCATTCAATTTTCCTG+GGG | - | chr4_2:64524350-64524369 | None:intergenic | 40.0% |
| ! | GGCCATCATTCAATTTTCCT+GGG | - | chr4_2:64524351-64524370 | None:intergenic | 40.0% |
| ACTATATCTCTAGTGCAGAG+TGG | + | chr4_2:64524451-64524470 | Msa0615130:CDS | 40.0% | |
| TTGAAACAAATGTAGCCCTG+GGG | - | chr4_2:64524498-64524517 | None:intergenic | 40.0% | |
| !!! | TTTGGTTTTGGATCCTGATC+TGG | + | chr4_2:64524522-64524541 | Msa0615130:CDS | 40.0% |
| ! | GTTGTTATTGGGGTGATGAT+AGG | - | chr4_2:64524568-64524587 | None:intergenic | 40.0% |
| ACAACCACTGATGAAGTTCT+AGG | + | chr4_2:64524583-64524602 | Msa0615130:CDS | 40.0% | |
| ! | CCAAAGCTTACCCAAGATTT+TGG | - | chr4_2:64524677-64524696 | None:intergenic | 40.0% |
| CCAAAATCTTGGGTAAGCTT+TGG | + | chr4_2:64524674-64524693 | Msa0615130:CDS | 40.0% | |
| !! | TAAGCTTTGGGGAGATATAC+AGG | + | chr4_2:64524687-64524706 | Msa0615130:CDS | 40.0% |
| !! | AAGTGGAGCATTGTCAGAAT+TGG | - | chr4_2:64524749-64524768 | None:intergenic | 40.0% |
| ! | TCTGAGATTATCTTTGCCAC+TGG | + | chr4_2:64524769-64524788 | Msa0615130:CDS | 40.0% |
| CACTGGAAAAAAAGGGAAGA+GGG | + | chr4_2:64524786-64524805 | Msa0615130:CDS | 40.0% | |
| ACTGGAAAAAAAGGGAAGAG+GGG | + | chr4_2:64524787-64524806 | Msa0615130:CDS | 40.0% | |
| ! | GTGGGAGATTTCTGTTTTCT+AGG | - | chr4_2:64524817-64524836 | None:intergenic | 40.0% |
| TATAGGCACAACAAATCCCA+AGG | + | chr4_2:64524859-64524878 | Msa0615130:CDS | 40.0% | |
| ACACTGATGCAGTTAATACC+TGG | + | chr4_2:64524887-64524906 | Msa0615130:CDS | 40.0% | |
| !! | AATAACTGCCAGTTTTGACC+AGG | - | chr4_2:64524908-64524927 | None:intergenic | 40.0% |
| GAATCTCCCATGATAACCTT+CGG | - | chr4_2:64523203-64523222 | None:intergenic | 40.0% | |
| TCCAAAGCTGCATATGAAAC+GGG | + | chr4_2:64523239-64523258 | Msa0615130:CDS | 40.0% | |
| GGAAGATTAACCCTTCACAA+AGG | + | chr4_2:64523290-64523309 | Msa0615130:CDS | 40.0% | |
| TTCAAAGCTTGCGTTGTAAC+CGG | - | chr4_2:64523323-64523342 | None:intergenic | 40.0% | |
| AATTCTTCAAGTGTGGCCAT+TGG | - | chr4_2:64523361-64523380 | None:intergenic | 40.0% | |
| AATGGCCACACTTGAAGAAT+TGG | + | chr4_2:64523360-64523379 | Msa0615130:CDS | 40.0% | |
| AATTGGAGCCTAATTCCTCT+TGG | + | chr4_2:64523377-64523396 | Msa0615130:CDS | 40.0% | |
| AGCCTAATTCCTCTTGGAAA+GGG | + | chr4_2:64523383-64523402 | Msa0615130:CDS | 40.0% | |
| ATCCCTTTCCAAGAGGAATT+AGG | - | chr4_2:64523388-64523407 | None:intergenic | 40.0% | |
| TCAAAGAATCCCTTTCCAAG+AGG | - | chr4_2:64523395-64523414 | None:intergenic | 40.0% | |
| TTGAAGAAATGCGACAAGTC+TGG | + | chr4_2:64523432-64523451 | Msa0615130:CDS | 40.0% | |
| TGAAGAAATGCGACAAGTCT+GGG | + | chr4_2:64523433-64523452 | Msa0615130:CDS | 40.0% | |
| CTCAAACTCATGCTCAAGTA+TGG | + | chr4_2:64523534-64523553 | Msa0615130:CDS | 40.0% | |
| TGAACCTACCTCAAGAATAC+TGG | + | chr4_2:64523567-64523586 | Msa0615130:CDS | 40.0% | |
| GAACCTACCTCAAGAATACT+GGG | + | chr4_2:64523568-64523587 | Msa0615130:CDS | 40.0% | |
| TGTTTCTCCCAGTATTCTTG+AGG | - | chr4_2:64523578-64523597 | None:intergenic | 40.0% | |
| TTGCAATGAGCACAATACAG+AGG | - | chr4_2:64523788-64523807 | None:intergenic | 40.0% | |
| TGTGCTCATTGCAAGTCTTT+AGG | + | chr4_2:64523794-64523813 | Msa0615130:CDS | 40.0% | |
| CAAGTGAGCCAAAAGTCTAT+TGG | + | chr4_2:64523875-64523894 | Msa0615130:CDS | 40.0% | |
| AGTCAAACTGGAATTGCCAT+GGG | - | chr4_2:64523957-64523976 | None:intergenic | 40.0% | |
| TGTCTGATTACCAGTCAAAC+TGG | - | chr4_2:64523969-64523988 | None:intergenic | 40.0% | |
| AGTTTGACTGGTAATCAGAC+AGG | + | chr4_2:64523968-64523987 | Msa0615130:CDS | 40.0% | |
| TTCCTCATTCAGCAGATCAA+AGG | - | chr4_2:64524185-64524204 | None:intergenic | 40.0% | |
| GAGGAAGAACAAGTTATGAC+AGG | + | chr4_2:64524199-64524218 | Msa0615130:CDS | 40.0% | |
| GGAAGAACAAGTTATGACAG+GGG | + | chr4_2:64524201-64524220 | Msa0615130:CDS | 40.0% | |
| AGCATATCAGTTGTAAGGTG+AGG | + | chr4_2:64524275-64524294 | Msa0615130:CDS | 40.0% | |
| ATCCCATAGAGAAGGATGAT+TGG | + | chr4_2:64524302-64524321 | Msa0615130:CDS | 40.0% | |
| ! | GCCATCATTCAATTTTCCTG+GGG | - | chr4_2:64524350-64524369 | None:intergenic | 40.0% |
| ! | GGCCATCATTCAATTTTCCT+GGG | - | chr4_2:64524351-64524370 | None:intergenic | 40.0% |
| ACTATATCTCTAGTGCAGAG+TGG | + | chr4_2:64524451-64524470 | Msa0615130:CDS | 40.0% | |
| TTGAAACAAATGTAGCCCTG+GGG | - | chr4_2:64524498-64524517 | None:intergenic | 40.0% | |
| !!! | TTTGGTTTTGGATCCTGATC+TGG | + | chr4_2:64524522-64524541 | Msa0615130:CDS | 40.0% |
| ! | GTTGTTATTGGGGTGATGAT+AGG | - | chr4_2:64524568-64524587 | None:intergenic | 40.0% |
| ACAACCACTGATGAAGTTCT+AGG | + | chr4_2:64524583-64524602 | Msa0615130:CDS | 40.0% | |
| ! | CCAAAGCTTACCCAAGATTT+TGG | - | chr4_2:64524677-64524696 | None:intergenic | 40.0% |
| CCAAAATCTTGGGTAAGCTT+TGG | + | chr4_2:64524674-64524693 | Msa0615130:CDS | 40.0% | |
| !! | TAAGCTTTGGGGAGATATAC+AGG | + | chr4_2:64524687-64524706 | Msa0615130:CDS | 40.0% |
| !! | AAGTGGAGCATTGTCAGAAT+TGG | - | chr4_2:64524749-64524768 | None:intergenic | 40.0% |
| ! | TCTGAGATTATCTTTGCCAC+TGG | + | chr4_2:64524769-64524788 | Msa0615130:CDS | 40.0% |
| CACTGGAAAAAAAGGGAAGA+GGG | + | chr4_2:64524786-64524805 | Msa0615130:CDS | 40.0% | |
| ACTGGAAAAAAAGGGAAGAG+GGG | + | chr4_2:64524787-64524806 | Msa0615130:CDS | 40.0% | |
| ! | GTGGGAGATTTCTGTTTTCT+AGG | - | chr4_2:64524817-64524836 | None:intergenic | 40.0% |
| TATAGGCACAACAAATCCCA+AGG | + | chr4_2:64524859-64524878 | Msa0615130:CDS | 40.0% | |
| ACACTGATGCAGTTAATACC+TGG | + | chr4_2:64524887-64524906 | Msa0615130:CDS | 40.0% | |
| !! | AATAACTGCCAGTTTTGACC+AGG | - | chr4_2:64524908-64524927 | None:intergenic | 40.0% |
| CTACCTCCGAAGGTTATCAT+GGG | + | chr4_2:64523194-64523213 | Msa0615130:CDS | 45.0% | |
| TGGGAGATTCTGTTCGAATC+AGG | + | chr4_2:64523213-64523232 | Msa0615130:CDS | 45.0% | |
| ACCCGTTTCATATGCAGCTT+TGG | - | chr4_2:64523243-64523262 | None:intergenic | 45.0% | |
| GCTTGCAGAACTCATCTTCA+TGG | + | chr4_2:64523269-64523288 | Msa0615130:CDS | 45.0% | |
| ! | GGTTACAACGCAAGCTTTGA+AGG | + | chr4_2:64523322-64523341 | Msa0615130:CDS | 45.0% |
| AGGCTCCAATTCTTCAAGTG+TGG | - | chr4_2:64523368-64523387 | None:intergenic | 45.0% | |
| GAGCCTAATTCCTCTTGGAA+AGG | + | chr4_2:64523382-64523401 | Msa0615130:CDS | 45.0% | |
| TCGCTTCTATTGCTGGACTA+AGG | + | chr4_2:64523490-64523509 | Msa0615130:CDS | 45.0% | |
| TGAGTTTGAGCTTGTGCTTG+AGG | - | chr4_2:64523524-64523543 | None:intergenic | 45.0% | |
| TCTCCCAGTATTCTTGAGGT+AGG | - | chr4_2:64523574-64523593 | None:intergenic | 45.0% | |
| TGATCATGCTCTGTCCATCT+TGG | + | chr4_2:64523745-64523764 | Msa0615130:CDS | 45.0% | |
| ! | AACAAAGGCATGACCAGAAC+TGG | + | chr4_2:64523905-64523924 | Msa0615130:CDS | 45.0% |
| ! | ACAAAGGCATGACCAGAACT+GGG | + | chr4_2:64523906-64523925 | Msa0615130:CDS | 45.0% |
| TTTACCACTCATCCCAGTTC+TGG | - | chr4_2:64523921-64523940 | None:intergenic | 45.0% | |
| AACTGGGATGAGTGGTAAAC+AGG | + | chr4_2:64523922-64523941 | Msa0615130:CDS | 45.0% | |
| AAACAGGATACGAATGCCCA+TGG | + | chr4_2:64523938-64523957 | Msa0615130:CDS | 45.0% | |
| CAGTCAAACTGGAATTGCCA+TGG | - | chr4_2:64523958-64523977 | None:intergenic | 45.0% | |
| CATGGCAATTCCAGTTTGAC+TGG | + | chr4_2:64523956-64523975 | Msa0615130:CDS | 45.0% | |
| ! | GGTAATCAGACAGGTACTGT+TGG | + | chr4_2:64523977-64523996 | Msa0615130:CDS | 45.0% |
| TCAGTCATTGAGGTTGAGGA+GGG | + | chr4_2:64524052-64524071 | Msa0615130:CDS | 45.0% | |
| CAGGCTGAATTTCATACTGC+TGG | + | chr4_2:64524124-64524143 | Msa0615130:CDS | 45.0% | |
| CTCCTTTGATCTGCTGAATG+AGG | + | chr4_2:64524180-64524199 | Msa0615130:CDS | 45.0% | |
| GGGAGACTAGACCAATTGAT+GGG | + | chr4_2:64524221-64524240 | Msa0615130:CDS | 45.0% | |
| GGAGACTAGACCAATTGATG+GGG | + | chr4_2:64524222-64524241 | Msa0615130:CDS | 45.0% | |
| CTCATCTTCCTCAACAGTGA+GGG | - | chr4_2:64524257-64524276 | None:intergenic | 45.0% | |
| GCCCCAGGAAAATTGAATGA+TGG | + | chr4_2:64524346-64524365 | Msa0615130:CDS | 45.0% | |
| ! | GGGCCATCATTCAATTTTCC+TGG | - | chr4_2:64524352-64524371 | None:intergenic | 45.0% |
| ! | GACACATGAATAGGCTTGCT+TGG | - | chr4_2:64524397-64524416 | None:intergenic | 45.0% |
| GTGATGATAGGATGCAGGAT+AGG | - | chr4_2:64524556-64524575 | None:intergenic | 45.0% | |
| AGGTCCTAGAACTTCATCAG+TGG | - | chr4_2:64524590-64524609 | None:intergenic | 45.0% | |
| !! | GAAGTTCTAGGACCTGACAA+AGG | + | chr4_2:64524595-64524614 | Msa0615130:CDS | 45.0% |
| ATCTGCACTTTGCCTTTGTC+AGG | - | chr4_2:64524610-64524629 | None:intergenic | 45.0% | |
| GATCTCTGATGGTACCAAAC+AGG | + | chr4_2:64524627-64524646 | Msa0615130:CDS | 45.0% | |
| GTCTGACAATGACTCACAGA+TGG | + | chr4_2:64524723-64524742 | Msa0615130:CDS | 45.0% | |
| !!! | CCTCTTCCCTTTTTTTCCAG+TGG | - | chr4_2:64524788-64524807 | None:intergenic | 45.0% |
| CCACTGGAAAAAAAGGGAAG+AGG | + | chr4_2:64524785-64524804 | Msa0615130:CDS | 45.0% | |
| ! | TTTGTTGTGCCTATACGCAG+AGG | - | chr4_2:64524854-64524873 | None:intergenic | 45.0% |
| ! | TGCATCAGTGTTGTTGCCTT+GGG | - | chr4_2:64524878-64524897 | None:intergenic | 45.0% |
| CTACCTCCGAAGGTTATCAT+GGG | + | chr4_2:64523194-64523213 | Msa0615130:CDS | 45.0% | |
| TGGGAGATTCTGTTCGAATC+AGG | + | chr4_2:64523213-64523232 | Msa0615130:CDS | 45.0% | |
| ACCCGTTTCATATGCAGCTT+TGG | - | chr4_2:64523243-64523262 | None:intergenic | 45.0% | |
| GCTTGCAGAACTCATCTTCA+TGG | + | chr4_2:64523269-64523288 | Msa0615130:CDS | 45.0% | |
| ! | GGTTACAACGCAAGCTTTGA+AGG | + | chr4_2:64523322-64523341 | Msa0615130:CDS | 45.0% |
| AGGCTCCAATTCTTCAAGTG+TGG | - | chr4_2:64523368-64523387 | None:intergenic | 45.0% | |
| GAGCCTAATTCCTCTTGGAA+AGG | + | chr4_2:64523382-64523401 | Msa0615130:CDS | 45.0% | |
| TCGCTTCTATTGCTGGACTA+AGG | + | chr4_2:64523490-64523509 | Msa0615130:CDS | 45.0% | |
| TGAGTTTGAGCTTGTGCTTG+AGG | - | chr4_2:64523524-64523543 | None:intergenic | 45.0% | |
| TCTCCCAGTATTCTTGAGGT+AGG | - | chr4_2:64523574-64523593 | None:intergenic | 45.0% | |
| TGATCATGCTCTGTCCATCT+TGG | + | chr4_2:64523745-64523764 | Msa0615130:CDS | 45.0% | |
| ! | AACAAAGGCATGACCAGAAC+TGG | + | chr4_2:64523905-64523924 | Msa0615130:CDS | 45.0% |
| ! | ACAAAGGCATGACCAGAACT+GGG | + | chr4_2:64523906-64523925 | Msa0615130:CDS | 45.0% |
| TTTACCACTCATCCCAGTTC+TGG | - | chr4_2:64523921-64523940 | None:intergenic | 45.0% | |
| AACTGGGATGAGTGGTAAAC+AGG | + | chr4_2:64523922-64523941 | Msa0615130:CDS | 45.0% | |
| AAACAGGATACGAATGCCCA+TGG | + | chr4_2:64523938-64523957 | Msa0615130:CDS | 45.0% | |
| CAGTCAAACTGGAATTGCCA+TGG | - | chr4_2:64523958-64523977 | None:intergenic | 45.0% | |
| CATGGCAATTCCAGTTTGAC+TGG | + | chr4_2:64523956-64523975 | Msa0615130:CDS | 45.0% | |
| ! | GGTAATCAGACAGGTACTGT+TGG | + | chr4_2:64523977-64523996 | Msa0615130:CDS | 45.0% |
| TCAGTCATTGAGGTTGAGGA+GGG | + | chr4_2:64524052-64524071 | Msa0615130:CDS | 45.0% | |
| CAGGCTGAATTTCATACTGC+TGG | + | chr4_2:64524124-64524143 | Msa0615130:CDS | 45.0% | |
| CTCCTTTGATCTGCTGAATG+AGG | + | chr4_2:64524180-64524199 | Msa0615130:CDS | 45.0% | |
| GGGAGACTAGACCAATTGAT+GGG | + | chr4_2:64524221-64524240 | Msa0615130:CDS | 45.0% | |
| GGAGACTAGACCAATTGATG+GGG | + | chr4_2:64524222-64524241 | Msa0615130:CDS | 45.0% | |
| CTCATCTTCCTCAACAGTGA+GGG | - | chr4_2:64524257-64524276 | None:intergenic | 45.0% | |
| GCCCCAGGAAAATTGAATGA+TGG | + | chr4_2:64524346-64524365 | Msa0615130:CDS | 45.0% | |
| ! | GGGCCATCATTCAATTTTCC+TGG | - | chr4_2:64524352-64524371 | None:intergenic | 45.0% |
| ! | GACACATGAATAGGCTTGCT+TGG | - | chr4_2:64524397-64524416 | None:intergenic | 45.0% |
| GTGATGATAGGATGCAGGAT+AGG | - | chr4_2:64524556-64524575 | None:intergenic | 45.0% | |
| AGGTCCTAGAACTTCATCAG+TGG | - | chr4_2:64524590-64524609 | None:intergenic | 45.0% | |
| !! | GAAGTTCTAGGACCTGACAA+AGG | + | chr4_2:64524595-64524614 | Msa0615130:CDS | 45.0% |
| ATCTGCACTTTGCCTTTGTC+AGG | - | chr4_2:64524610-64524629 | None:intergenic | 45.0% | |
| GATCTCTGATGGTACCAAAC+AGG | + | chr4_2:64524627-64524646 | Msa0615130:CDS | 45.0% | |
| GTCTGACAATGACTCACAGA+TGG | + | chr4_2:64524723-64524742 | Msa0615130:CDS | 45.0% | |
| !!! | CCTCTTCCCTTTTTTTCCAG+TGG | - | chr4_2:64524788-64524807 | None:intergenic | 45.0% |
| CCACTGGAAAAAAAGGGAAG+AGG | + | chr4_2:64524785-64524804 | Msa0615130:CDS | 45.0% | |
| ! | TTTGTTGTGCCTATACGCAG+AGG | - | chr4_2:64524854-64524873 | None:intergenic | 45.0% |
| ! | TGCATCAGTGTTGTTGCCTT+GGG | - | chr4_2:64524878-64524897 | None:intergenic | 45.0% |
| GAGTCCAAAGCCGCCATAAA+CGG | - | chr4_2:64523065-64523084 | None:intergenic | 50.0% | |
| !! | TATGGCGGCTTTGGACTCAT+CGG | + | chr4_2:64523067-64523086 | Msa0615130:CDS | 50.0% |
| !! | GCGAAGGATTTGGTGGATTC+TGG | - | chr4_2:64523128-64523147 | None:intergenic | 50.0% |
| AGCTTGAGCGAAGGATTTGG+TGG | - | chr4_2:64523135-64523154 | None:intergenic | 50.0% | |
| GAGAGCTTGAGCGAAGGATT+TGG | - | chr4_2:64523138-64523157 | None:intergenic | 50.0% | |
| TGCCTCTGATGAGCAACTCA+TGG | + | chr4_2:64523166-64523185 | Msa0615130:CDS | 50.0% | |
| AGCCATGAGTTGCTCATCAG+AGG | - | chr4_2:64523171-64523190 | None:intergenic | 50.0% | |
| GCTACCTCCGAAGGTTATCA+TGG | + | chr4_2:64523193-64523212 | Msa0615130:CDS | 50.0% | |
| TCTCCCATGATAACCTTCGG+AGG | - | chr4_2:64523200-64523219 | None:intergenic | 50.0% | |
| CGGAGAATCCCCTTTGTGAA+GGG | - | chr4_2:64523303-64523322 | None:intergenic | 50.0% | |
| CCTTCACAAAGGGGATTCTC+CGG | + | chr4_2:64523301-64523320 | Msa0615130:CDS | 50.0% | |
| CAATAGAAGCGAAGCAGTCC+AGG | - | chr4_2:64523482-64523501 | None:intergenic | 50.0% | |
| GACTGCTTCGCTTCTATTGC+TGG | + | chr4_2:64523483-64523502 | Msa0615130:CDS | 50.0% | |
| !!! | GACTTTTGGCTCACTTGCAC+AGG | - | chr4_2:64523872-64523891 | None:intergenic | 50.0% |
| ATGACCAGAACTGGGATGAG+TGG | + | chr4_2:64523914-64523933 | Msa0615130:CDS | 50.0% | |
| GAACTCTGATAAGCACCAGC+TGG | + | chr4_2:64524027-64524046 | Msa0615130:CDS | 50.0% | |
| GGAGTCAGTCATTGAGGTTG+AGG | + | chr4_2:64524048-64524067 | Msa0615130:CDS | 50.0% | |
| GTCAGTCATTGAGGTTGAGG+AGG | + | chr4_2:64524051-64524070 | Msa0615130:CDS | 50.0% | |
| GGGGAGACTAGACCAATTGA+TGG | + | chr4_2:64524220-64524239 | Msa0615130:CDS | 50.0% | |
| GAGGGAAGATCCCCATCAAT+TGG | - | chr4_2:64524235-64524254 | None:intergenic | 50.0% | |
| TCTTCCTCAACAGTGAGGGA+GGG | - | chr4_2:64524253-64524272 | None:intergenic | 50.0% | |
| ATCTTCCTCAACAGTGAGGG+AGG | - | chr4_2:64524254-64524273 | None:intergenic | 50.0% | |
| GCTCATCTTCCTCAACAGTG+AGG | - | chr4_2:64524258-64524277 | None:intergenic | 50.0% | |
| GAGGACAGATCCCATAGAGA+AGG | + | chr4_2:64524294-64524313 | Msa0615130:CDS | 50.0% | |
| GATACACCCCACAATCTCTG+AGG | + | chr4_2:64524324-64524343 | Msa0615130:CDS | 50.0% | |
| ATGCAGACCACGGTCTTTGA+GGG | - | chr4_2:64524373-64524392 | None:intergenic | 50.0% | |
| AATGCAGACCACGGTCTTTG+AGG | - | chr4_2:64524374-64524393 | None:intergenic | 50.0% | |
| CTTGCTTGGAATGCAGACCA+CGG | - | chr4_2:64524383-64524402 | None:intergenic | 50.0% | |
| TAGTGCAGAGTGGCAATGCT+GGG | + | chr4_2:64524461-64524480 | Msa0615130:CDS | 50.0% | |
| ACAAATGTAGCCCTGGGGAA+TGG | - | chr4_2:64524493-64524512 | None:intergenic | 50.0% | |
| !!! | GGTTTTGGATCCTGATCTGG+TGG | + | chr4_2:64524525-64524544 | Msa0615130:CDS | 50.0% |
| ATAGGTTGCTCCACCAGATC+AGG | - | chr4_2:64524538-64524557 | None:intergenic | 50.0% | |
| TTGGGGTGATGATAGGATGC+AGG | - | chr4_2:64524561-64524580 | None:intergenic | 50.0% | |
| GGCAAAGTGCAGATCTCTGA+TGG | + | chr4_2:64524616-64524635 | Msa0615130:CDS | 50.0% | |
| ! | GCTTTTGATGCTTGCAGCAG+TGG | - | chr4_2:64524653-64524672 | None:intergenic | 50.0% |
| ! | GAGGCATCAGGTGCTTTAGT+GGG | - | chr4_2:64524835-64524854 | None:intergenic | 50.0% |
| !! | AGAGGCATCAGGTGCTTTAG+TGG | - | chr4_2:64524836-64524855 | None:intergenic | 50.0% |
| ! | CTGCATCAGTGTTGTTGCCT+TGG | - | chr4_2:64524879-64524898 | None:intergenic | 50.0% |
| GAGTCCAAAGCCGCCATAAA+CGG | - | chr4_2:64523065-64523084 | None:intergenic | 50.0% | |
| !! | TATGGCGGCTTTGGACTCAT+CGG | + | chr4_2:64523067-64523086 | Msa0615130:CDS | 50.0% |
| !! | GCGAAGGATTTGGTGGATTC+TGG | - | chr4_2:64523128-64523147 | None:intergenic | 50.0% |
| AGCTTGAGCGAAGGATTTGG+TGG | - | chr4_2:64523135-64523154 | None:intergenic | 50.0% | |
| GAGAGCTTGAGCGAAGGATT+TGG | - | chr4_2:64523138-64523157 | None:intergenic | 50.0% | |
| TGCCTCTGATGAGCAACTCA+TGG | + | chr4_2:64523166-64523185 | Msa0615130:CDS | 50.0% | |
| AGCCATGAGTTGCTCATCAG+AGG | - | chr4_2:64523171-64523190 | None:intergenic | 50.0% | |
| GCTACCTCCGAAGGTTATCA+TGG | + | chr4_2:64523193-64523212 | Msa0615130:CDS | 50.0% | |
| TCTCCCATGATAACCTTCGG+AGG | - | chr4_2:64523200-64523219 | None:intergenic | 50.0% | |
| CGGAGAATCCCCTTTGTGAA+GGG | - | chr4_2:64523303-64523322 | None:intergenic | 50.0% | |
| CCTTCACAAAGGGGATTCTC+CGG | + | chr4_2:64523301-64523320 | Msa0615130:CDS | 50.0% | |
| CAATAGAAGCGAAGCAGTCC+AGG | - | chr4_2:64523482-64523501 | None:intergenic | 50.0% | |
| GACTGCTTCGCTTCTATTGC+TGG | + | chr4_2:64523483-64523502 | Msa0615130:CDS | 50.0% | |
| !!! | GACTTTTGGCTCACTTGCAC+AGG | - | chr4_2:64523872-64523891 | None:intergenic | 50.0% |
| ATGACCAGAACTGGGATGAG+TGG | + | chr4_2:64523914-64523933 | Msa0615130:CDS | 50.0% | |
| GAACTCTGATAAGCACCAGC+TGG | + | chr4_2:64524027-64524046 | Msa0615130:CDS | 50.0% | |
| GGAGTCAGTCATTGAGGTTG+AGG | + | chr4_2:64524048-64524067 | Msa0615130:CDS | 50.0% | |
| GTCAGTCATTGAGGTTGAGG+AGG | + | chr4_2:64524051-64524070 | Msa0615130:CDS | 50.0% | |
| GGGGAGACTAGACCAATTGA+TGG | + | chr4_2:64524220-64524239 | Msa0615130:CDS | 50.0% | |
| GAGGGAAGATCCCCATCAAT+TGG | - | chr4_2:64524235-64524254 | None:intergenic | 50.0% | |
| TCTTCCTCAACAGTGAGGGA+GGG | - | chr4_2:64524253-64524272 | None:intergenic | 50.0% | |
| ATCTTCCTCAACAGTGAGGG+AGG | - | chr4_2:64524254-64524273 | None:intergenic | 50.0% | |
| GCTCATCTTCCTCAACAGTG+AGG | - | chr4_2:64524258-64524277 | None:intergenic | 50.0% | |
| GAGGACAGATCCCATAGAGA+AGG | + | chr4_2:64524294-64524313 | Msa0615130:CDS | 50.0% | |
| GATACACCCCACAATCTCTG+AGG | + | chr4_2:64524324-64524343 | Msa0615130:CDS | 50.0% | |
| ATGCAGACCACGGTCTTTGA+GGG | - | chr4_2:64524373-64524392 | None:intergenic | 50.0% | |
| AATGCAGACCACGGTCTTTG+AGG | - | chr4_2:64524374-64524393 | None:intergenic | 50.0% | |
| CTTGCTTGGAATGCAGACCA+CGG | - | chr4_2:64524383-64524402 | None:intergenic | 50.0% | |
| TAGTGCAGAGTGGCAATGCT+GGG | + | chr4_2:64524461-64524480 | Msa0615130:CDS | 50.0% | |
| ACAAATGTAGCCCTGGGGAA+TGG | - | chr4_2:64524493-64524512 | None:intergenic | 50.0% | |
| !!! | GGTTTTGGATCCTGATCTGG+TGG | + | chr4_2:64524525-64524544 | Msa0615130:CDS | 50.0% |
| ATAGGTTGCTCCACCAGATC+AGG | - | chr4_2:64524538-64524557 | None:intergenic | 50.0% | |
| TTGGGGTGATGATAGGATGC+AGG | - | chr4_2:64524561-64524580 | None:intergenic | 50.0% | |
| GGCAAAGTGCAGATCTCTGA+TGG | + | chr4_2:64524616-64524635 | Msa0615130:CDS | 50.0% | |
| ! | GCTTTTGATGCTTGCAGCAG+TGG | - | chr4_2:64524653-64524672 | None:intergenic | 50.0% |
| ! | GAGGCATCAGGTGCTTTAGT+GGG | - | chr4_2:64524835-64524854 | None:intergenic | 50.0% |
| !! | AGAGGCATCAGGTGCTTTAG+TGG | - | chr4_2:64524836-64524855 | None:intergenic | 50.0% |
| ! | CTGCATCAGTGTTGTTGCCT+TGG | - | chr4_2:64524879-64524898 | None:intergenic | 50.0% |
| GTGTCCATGGCCGTTTATGG+CGG | + | chr4_2:64523052-64523071 | Msa0615130:CDS | 55.0% | |
| AAAGCCGCCATAAACGGCCA+TGG | - | chr4_2:64523059-64523078 | None:intergenic | 55.0% | |
| ATGGCCGTTTATGGCGGCTT+TGG | + | chr4_2:64523058-64523077 | Msa0615130:CDS | 55.0% | |
| GGACAAACGACCAACCTCGA+TGG | + | chr4_2:64523091-64523110 | Msa0615130:CDS | 55.0% | |
| CAAACGACCAACCTCGATGG+TGG | + | chr4_2:64523094-64523113 | Msa0615130:CDS | 55.0% | |
| TCCTTCGCTCAAGCTCTCTC+CGG | + | chr4_2:64523140-64523159 | Msa0615130:CDS | 55.0% | |
| TTGCTCATCAGAGGCAACGC+CGG | - | chr4_2:64523162-64523181 | None:intergenic | 55.0% | |
| CCGGAGAATCCCCTTTGTGA+AGG | - | chr4_2:64523304-64523323 | None:intergenic | 55.0% | |
| ATGCGACAAGTCTGGGCTCT+TGG | + | chr4_2:64523440-64523459 | Msa0615130:CDS | 55.0% | |
| GGCACTGTGAACCTCAAACC+TGG | + | chr4_2:64523461-64523480 | Msa0615130:CDS | 55.0% | |
| AGCGAAGCAGTCCAGGTTTG+AGG | - | chr4_2:64523475-64523494 | None:intergenic | 55.0% | |
| CTCACTTGCACAGGCCCATT+AGG | - | chr4_2:64523863-64523882 | None:intergenic | 55.0% | |
| ! | CCTCAATGACTGACTCCAGC+TGG | - | chr4_2:64524045-64524064 | None:intergenic | 55.0% |
| CCAGCTGGAGTCAGTCATTG+AGG | + | chr4_2:64524042-64524061 | Msa0615130:CDS | 55.0% | |
| TCTTCCCTCCCTCACTGTTG+AGG | + | chr4_2:64524246-64524265 | Msa0615130:CDS | 55.0% | |
| TGCAGACCACGGTCTTTGAG+GGG | - | chr4_2:64524372-64524391 | None:intergenic | 55.0% | |
| CTAGTGCAGAGTGGCAATGC+TGG | + | chr4_2:64524460-64524479 | Msa0615130:CDS | 55.0% | |
| CACCTGATGCCTCTGCGTAT+AGG | + | chr4_2:64524842-64524861 | Msa0615130:CDS | 55.0% | |
| !! | TGCCTATACGCAGAGGCATC+AGG | - | chr4_2:64524847-64524866 | None:intergenic | 55.0% |
| GTGTCCATGGCCGTTTATGG+CGG | + | chr4_2:64523052-64523071 | Msa0615130:CDS | 55.0% | |
| AAAGCCGCCATAAACGGCCA+TGG | - | chr4_2:64523059-64523078 | None:intergenic | 55.0% | |
| ATGGCCGTTTATGGCGGCTT+TGG | + | chr4_2:64523058-64523077 | Msa0615130:CDS | 55.0% | |
| GGACAAACGACCAACCTCGA+TGG | + | chr4_2:64523091-64523110 | Msa0615130:CDS | 55.0% | |
| CAAACGACCAACCTCGATGG+TGG | + | chr4_2:64523094-64523113 | Msa0615130:CDS | 55.0% | |
| TCCTTCGCTCAAGCTCTCTC+CGG | + | chr4_2:64523140-64523159 | Msa0615130:CDS | 55.0% | |
| TTGCTCATCAGAGGCAACGC+CGG | - | chr4_2:64523162-64523181 | None:intergenic | 55.0% | |
| CCGGAGAATCCCCTTTGTGA+AGG | - | chr4_2:64523304-64523323 | None:intergenic | 55.0% | |
| ATGCGACAAGTCTGGGCTCT+TGG | + | chr4_2:64523440-64523459 | Msa0615130:CDS | 55.0% | |
| GGCACTGTGAACCTCAAACC+TGG | + | chr4_2:64523461-64523480 | Msa0615130:CDS | 55.0% | |
| AGCGAAGCAGTCCAGGTTTG+AGG | - | chr4_2:64523475-64523494 | None:intergenic | 55.0% | |
| CTCACTTGCACAGGCCCATT+AGG | - | chr4_2:64523863-64523882 | None:intergenic | 55.0% | |
| ! | CCTCAATGACTGACTCCAGC+TGG | - | chr4_2:64524045-64524064 | None:intergenic | 55.0% |
| CCAGCTGGAGTCAGTCATTG+AGG | + | chr4_2:64524042-64524061 | Msa0615130:CDS | 55.0% | |
| TCTTCCCTCCCTCACTGTTG+AGG | + | chr4_2:64524246-64524265 | Msa0615130:CDS | 55.0% | |
| TGCAGACCACGGTCTTTGAG+GGG | - | chr4_2:64524372-64524391 | None:intergenic | 55.0% | |
| CTAGTGCAGAGTGGCAATGC+TGG | + | chr4_2:64524460-64524479 | Msa0615130:CDS | 55.0% | |
| CACCTGATGCCTCTGCGTAT+AGG | + | chr4_2:64524842-64524861 | Msa0615130:CDS | 55.0% | |
| !! | TGCCTATACGCAGAGGCATC+AGG | - | chr4_2:64524847-64524866 | None:intergenic | 55.0% |
| GGCGTGTCCATGGCCGTTTA+TGG | + | chr4_2:64523049-64523068 | Msa0615130:CDS | 60.0% | |
| GACTTCGCCACCATCGAGGT+TGG | - | chr4_2:64523104-64523123 | None:intergenic | 60.0% | |
| TGGAGACTTCGCCACCATCG+AGG | - | chr4_2:64523108-64523127 | None:intergenic | 60.0% | |
| CATGGCTCAGCTACCTCCGA+AGG | + | chr4_2:64523184-64523203 | Msa0615130:CDS | 60.0% | |
| CTGGGGCCTCAGAGATTGTG+GGG | - | chr4_2:64524333-64524352 | None:intergenic | 60.0% | |
| CCTGGGGCCTCAGAGATTGT+GGG | - | chr4_2:64524334-64524353 | None:intergenic | 60.0% | |
| TCCTGGGGCCTCAGAGATTG+TGG | - | chr4_2:64524335-64524354 | None:intergenic | 60.0% | |
| TGATGGCCCCTCAAAGACCG+TGG | + | chr4_2:64524363-64524382 | Msa0615130:CDS | 60.0% | |
| TGCAGAGTGGCAATGCTGGG+AGG | + | chr4_2:64524464-64524483 | Msa0615130:CDS | 60.0% | |
| GCAGAGTGGCAATGCTGGGA+GGG | + | chr4_2:64524465-64524484 | Msa0615130:CDS | 60.0% | |
| GCTTGCAGCAGTGGCCTGTT+TGG | - | chr4_2:64524644-64524663 | None:intergenic | 60.0% | |
| GGCGTGTCCATGGCCGTTTA+TGG | + | chr4_2:64523049-64523068 | Msa0615130:CDS | 60.0% | |
| GACTTCGCCACCATCGAGGT+TGG | - | chr4_2:64523104-64523123 | None:intergenic | 60.0% | |
| TGGAGACTTCGCCACCATCG+AGG | - | chr4_2:64523108-64523127 | None:intergenic | 60.0% | |
| CATGGCTCAGCTACCTCCGA+AGG | + | chr4_2:64523184-64523203 | Msa0615130:CDS | 60.0% | |
| CTGGGGCCTCAGAGATTGTG+GGG | - | chr4_2:64524333-64524352 | None:intergenic | 60.0% | |
| CCTGGGGCCTCAGAGATTGT+GGG | - | chr4_2:64524334-64524353 | None:intergenic | 60.0% | |
| TCCTGGGGCCTCAGAGATTG+TGG | - | chr4_2:64524335-64524354 | None:intergenic | 60.0% | |
| TGATGGCCCCTCAAAGACCG+TGG | + | chr4_2:64524363-64524382 | Msa0615130:CDS | 60.0% | |
| TGCAGAGTGGCAATGCTGGG+AGG | + | chr4_2:64524464-64524483 | Msa0615130:CDS | 60.0% | |
| GCAGAGTGGCAATGCTGGGA+GGG | + | chr4_2:64524465-64524484 | Msa0615130:CDS | 60.0% | |
| GCTTGCAGCAGTGGCCTGTT+TGG | - | chr4_2:64524644-64524663 | None:intergenic | 60.0% | |
| !! | GGCGGCTTTGGACTCATCGG+TGG | + | chr4_2:64523070-64523089 | Msa0615130:CDS | 65.0% |
| GCCGGAGAGAGCTTGAGCGA+AGG | - | chr4_2:64523144-64523163 | None:intergenic | 65.0% | |
| !! | CCCACAATCTCTGAGGCCCC+AGG | + | chr4_2:64524331-64524350 | Msa0615130:CDS | 65.0% |
| !! | TGGGAGGGTGCCATTCCCCA+GGG | + | chr4_2:64524480-64524499 | Msa0615130:CDS | 65.0% |
| !! | GGCGGCTTTGGACTCATCGG+TGG | + | chr4_2:64523070-64523089 | Msa0615130:CDS | 65.0% |
| GCCGGAGAGAGCTTGAGCGA+AGG | - | chr4_2:64523144-64523163 | None:intergenic | 65.0% | |
| !! | CCCACAATCTCTGAGGCCCC+AGG | + | chr4_2:64524331-64524350 | Msa0615130:CDS | 65.0% |
| !! | TGGGAGGGTGCCATTCCCCA+GGG | + | chr4_2:64524480-64524499 | Msa0615130:CDS | 65.0% |
| !! | CTGGGAGGGTGCCATTCCCC+AGG | + | chr4_2:64524479-64524498 | Msa0615130:CDS | 70.0% |
| !! | CTGGGAGGGTGCCATTCCCC+AGG | + | chr4_2:64524479-64524498 | Msa0615130:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 64523047 | 64524957 | 64523047 | ID=Msa0615130;Name=Msa0615130 |
| chr4_2 | mRNA | 64523047 | 64524957 | 64523047 | ID=Msa0615130-mRNA-1;Parent=Msa0615130;Name=Msa0615130-mRNA-1;_AED=0.57;_eAED=0.58;_QI=0|-1|0|1|-1|1|1|0|636 |
| chr4_2 | exon | 64523047 | 64524957 | 64523047 | ID=Msa0615130-mRNA-1:exon:18098;Parent=Msa0615130-mRNA-1 |
| chr4_2 | CDS | 64523047 | 64524957 | 64523047 | ID=Msa0615130-mRNA-1:cds;Parent=Msa0615130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
