Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079100 | AES81817.2 | 75.789 | 475 | 72 | 7 | 39 | 495 | 3 | 452 | 0.0 | 690 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079100 | sp|Q05D44|IF2P_MOUSE | 45.887 | 231 | 119 | 3 | 264 | 491 | 953 | 1180 | 7.45e-49 | 184 |
| Msa1079100 | sp|Q05D44|IF2P_MOUSE | 33.891 | 239 | 111 | 8 | 51 | 255 | 626 | 851 | 4.80e-29 | 125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079100 | G7L1S6 | 75.789 | 475 | 72 | 7 | 39 | 495 | 3 | 452 | 0.0 | 690 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0615130 | Msa1079100 | 0.834789 | 2.445495e-56 | -8.615850e-47 |
| Msa0680100 | Msa1079100 | 0.839054 | 1.993398e-57 | -8.615850e-47 |
| Msa0730610 | Msa1079100 | 0.804989 | 1.657741e-49 | -8.615850e-47 |
| Msa0792290 | Msa1079100 | 0.835452 | 1.664405e-56 | -8.615850e-47 |
| Msa0473270 | Msa1079100 | 0.805755 | 1.145496e-49 | -8.615850e-47 |
| Msa1069220 | Msa1079100 | 0.803784 | 2.954616e-49 | -8.615850e-47 |
| Msa1077320 | Msa1079100 | 0.852538 | 4.323763e-61 | -8.615850e-47 |
| Msa1079100 | Msa1116990 | 0.823059 | 1.698075e-53 | -8.615850e-47 |
| Msa1079100 | Msa1124010 | 0.907436 | 5.079402e-81 | -8.615850e-47 |
| Msa1079100 | Msa1169290 | 0.836033 | 1.185703e-56 | -8.615850e-47 |
| Msa1079100 | Msa1173470 | 0.831154 | 1.960803e-55 | -8.615850e-47 |
| Msa1079100 | Msa1177130 | 0.808644 | 2.798370e-50 | -8.615850e-47 |
| Msa1079100 | Msa1177160 | 0.832075 | 1.162595e-55 | -8.615850e-47 |
| Msa1079100 | Msa1316930 | 0.811114 | 8.229472e-51 | -8.615850e-47 |
| Msa0354800 | Msa1079100 | -0.811192 | 7.915200e-51 | -8.615850e-47 |
| Msa0877250 | Msa1079100 | 0.805037 | 1.619707e-49 | -8.615850e-47 |
| Msa0968290 | Msa1079100 | 0.853896 | 1.763992e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079100 | MtrunA17_Chr4g0004141 | 71.519 | 474 | 77 | 11 | 39 | 494 | 3 | 436 | 0.0 | 635 |
| Msa1079100 | MtrunA17_Chr1g0202021 | 69.167 | 240 | 62 | 2 | 265 | 492 | 1067 | 1306 | 8.88e-100 | 327 |
| Msa1079100 | MtrunA17_Chr1g0202021 | 50.820 | 244 | 75 | 8 | 44 | 255 | 743 | 973 | 1.14e-61 | 218 |
| Msa1079100 | MtrunA17_Chr1g0201991 | 66.250 | 240 | 69 | 2 | 265 | 492 | 552 | 791 | 1.35e-97 | 312 |
| Msa1079100 | MtrunA17_Chr1g0201991 | 49.805 | 257 | 78 | 9 | 37 | 255 | 215 | 458 | 4.26e-61 | 214 |
| Msa1079100 | MtrunA17_Chr7g0263861 | 85.926 | 135 | 19 | 0 | 292 | 426 | 139 | 273 | 5.88e-76 | 239 |
| Msa1079100 | MtrunA17_Chr7g0263861 | 85.075 | 67 | 7 | 2 | 9 | 73 | 22 | 87 | 1.75e-28 | 114 |
| Msa1079100 | MtrunA17_Chr4g0000991 | 53.881 | 219 | 81 | 6 | 44 | 254 | 56 | 262 | 4.66e-64 | 213 |
| Msa1079100 | MtrunA17_Chr4g0000221 | 46.610 | 236 | 96 | 8 | 16 | 234 | 1 | 223 | 4.24e-49 | 175 |
| Msa1079100 | MtrunA17_Chr7g0264901 | 36.207 | 290 | 132 | 9 | 51 | 304 | 36 | 308 | 6.80e-41 | 151 |
| Msa1079100 | MtrunA17_Chr7g0264471 | 40.969 | 227 | 102 | 9 | 51 | 255 | 55 | 271 | 1.02e-37 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079100 | AT1G76810.1 | 61.250 | 240 | 80 | 3 | 265 | 492 | 1021 | 1259 | 1.75e-81 | 276 |
| Msa1079100 | AT1G76810.1 | 42.963 | 270 | 109 | 8 | 15 | 252 | 668 | 924 | 2.16e-52 | 191 |
| Msa1079100 | AT1G21160.1 | 51.220 | 246 | 101 | 6 | 265 | 492 | 813 | 1057 | 5.84e-65 | 228 |
| Msa1079100 | AT1G21160.1 | 39.114 | 271 | 104 | 8 | 31 | 252 | 458 | 716 | 1.93e-45 | 171 |
| Msa1079100 | AT1G76720.1 | 53.112 | 241 | 89 | 5 | 265 | 492 | 944 | 1173 | 7.72e-63 | 222 |
| Msa1079100 | AT1G76720.1 | 43.802 | 242 | 91 | 8 | 43 | 252 | 619 | 847 | 1.24e-50 | 186 |
| Msa1079100 | AT1G76720.2 | 53.112 | 241 | 89 | 5 | 265 | 492 | 977 | 1206 | 1.17e-62 | 221 |
| Msa1079100 | AT1G76720.2 | 43.802 | 242 | 91 | 8 | 43 | 252 | 652 | 880 | 1.48e-50 | 186 |
| Msa1079100 | AT2G27700.2 | 40.167 | 239 | 101 | 7 | 51 | 259 | 35 | 261 | 3.37e-39 | 149 |
| Msa1079100 | AT2G27700.2 | 49.606 | 127 | 55 | 1 | 265 | 382 | 353 | 479 | 8.89e-30 | 122 |
| Msa1079100 | AT2G27700.1 | 40.336 | 238 | 100 | 7 | 51 | 258 | 35 | 260 | 5.30e-39 | 148 |
| Msa1079100 | AT2G27700.1 | 49.606 | 127 | 55 | 1 | 265 | 382 | 352 | 478 | 9.23e-30 | 122 |
Find 119 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCTTTATCAACCGGTTTA+AGG | 0.103803 | 7_2:+78124446 | None:intergenic |
| TCTATGTGATATTGCTATTT+TGG | 0.172010 | 7_2:-78125933 | Msa1079100:CDS |
| AACAATAGAAATAACATATC+TGG | 0.212837 | 7_2:+78125566 | None:intergenic |
| TTATTGTTGAAGACAAAATT+TGG | 0.225479 | 7_2:+78124931 | None:intergenic |
| TTGGCAACTTGCACACAAAT+TGG | 0.226218 | 7_2:-78125079 | Msa1079100:CDS |
| TGTTGATAACGCACCAATTA+GGG | 0.236097 | 7_2:-78125963 | Msa1079100:CDS |
| TAATGACTTACCCGGTATTA+TGG | 0.245198 | 7_2:+78123987 | None:intergenic |
| CAATAAGGATCCCATTGTTT+TGG | 0.249255 | 7_2:-78124914 | Msa1079100:CDS |
| TTGTTGATAACGCACCAATT+AGG | 0.258555 | 7_2:-78125964 | Msa1079100:CDS |
| TTTAATAGATTGAGTGAGTC+TGG | 0.266163 | 7_2:+78125872 | None:intergenic |
| TCTTCTTCTTCGATGCGATT+AGG | 0.267102 | 7_2:+78126260 | None:intergenic |
| TTTCATTGTTGCCTTGAATA+AGG | 0.305733 | 7_2:-78125834 | Msa1079100:CDS |
| CATAGATATGAACCCCTAAT+TGG | 0.307692 | 7_2:+78125950 | None:intergenic |
| CTTCTTCTTCGATGCGATTA+GGG | 0.314767 | 7_2:+78126261 | None:intergenic |
| AGCATTGATGCAGCAGTCTA+AGG | 0.316795 | 7_2:-78125762 | Msa1079100:CDS |
| TCACAAAAGAACATTGATAT+TGG | 0.325612 | 7_2:-78124493 | Msa1079100:CDS |
| GAGGAACGGCAGAAAATGTT+TGG | 0.326899 | 7_2:-78124043 | Msa1079100:CDS |
| AGGGCAGCAAGTAGTCATTA+AGG | 0.347605 | 7_2:-78124419 | Msa1079100:intron |
| AACAACAAAACTATTGGAAT+TGG | 0.349319 | 7_2:-78125653 | Msa1079100:CDS |
| CCTTTCTCCGCTTTATCAAC+CGG | 0.361422 | 7_2:+78124439 | None:intergenic |
| TGTTATTTCTATTGTTTAAG+TGG | 0.372478 | 7_2:-78125559 | Msa1079100:CDS |
| AAACCTGTTTCCTGCATCAT+AGG | 0.383280 | 7_2:-78126106 | Msa1079100:CDS |
| TGCATGTAACTTTCACTCAT+TGG | 0.386009 | 7_2:-78125268 | Msa1079100:CDS |
| CGGTTTAAGGTTATTCTCAA+TGG | 0.393167 | 7_2:+78124459 | None:intergenic |
| GGTCAAGCCTAATGATGATT+TGG | 0.405047 | 7_2:-78125346 | Msa1079100:CDS |
| ATACCTTCAAAATGCCTTGA+AGG | 0.406082 | 7_2:+78124881 | None:intergenic |
| CCTATGTTTACAGCACTAAC+AGG | 0.412018 | 7_2:+78125204 | None:intergenic |
| GTAGGTAAAATTGTGAATAA+TGG | 0.421445 | 7_2:+78125526 | None:intergenic |
| GATCGGACCCTTCTTGTGTT+TGG | 0.424209 | 7_2:+78126292 | None:intergenic |
| GGCAACAATGAAATGTTTGT+TGG | 0.425660 | 7_2:+78125844 | None:intergenic |
| CAACTTGGTTTGCAGATTGT+TGG | 0.426486 | 7_2:-78124076 | Msa1079100:intron |
| TTCACCACTTATTGCACTTG+TGG | 0.428594 | 7_2:+78125595 | None:intergenic |
| GCTTTACGAAATGGAGCATT+GGG | 0.433943 | 7_2:+78125782 | None:intergenic |
| TCACCACTTATTGCACTTGT+GGG | 0.436527 | 7_2:+78125596 | None:intergenic |
| AAAACTATTGGAATTGGAGT+TGG | 0.440021 | 7_2:-78125647 | Msa1079100:CDS |
| TTGGAATCCAAATCATCATT+AGG | 0.446871 | 7_2:+78125339 | None:intergenic |
| ATGCTTCTCGGTTGTATTCG+AGG | 0.448156 | 7_2:-78126061 | Msa1079100:CDS |
| TCACCTATGATGCAGGAAAC+AGG | 0.449664 | 7_2:+78126103 | None:intergenic |
| TGCATCAATGCTTTACGAAA+TGG | 0.450689 | 7_2:+78125773 | None:intergenic |
| TCCACATCCTTCTTATGTAC+AGG | 0.452205 | 7_2:+78125180 | None:intergenic |
| AATTGTGAATAATGGTGTAT+TGG | 0.455721 | 7_2:+78125534 | None:intergenic |
| TGGCAACTTGCACACAAATT+GGG | 0.455869 | 7_2:-78125078 | Msa1079100:CDS |
| CATTGAGAATAACCTTAAAC+CGG | 0.464349 | 7_2:-78124458 | Msa1079100:CDS |
| ACTGGCAAAACCATGCTTCT+CGG | 0.473552 | 7_2:-78126073 | Msa1079100:CDS |
| GCTTCAGAGGTGACCATGAC+AGG | 0.474789 | 7_2:+78125102 | None:intergenic |
| GGAAAATGTGTTGTTGATGA+TGG | 0.476973 | 7_2:+78126016 | None:intergenic |
| GACTTACATGAAAAGACTTA+AGG | 0.477581 | 7_2:-78125004 | Msa1079100:CDS |
| TTCCGATAACTAGGCGGCGG+CGG | 0.480520 | 7_2:+78126127 | None:intergenic |
| TGCTTTACGAAATGGAGCAT+TGG | 0.484108 | 7_2:+78125781 | None:intergenic |
| CATAGGTCCTGTACATAAGA+AGG | 0.490399 | 7_2:-78125187 | Msa1079100:CDS |
| ACTATTGGAATTGGAGTTGG+AGG | 0.492297 | 7_2:-78125644 | Msa1079100:CDS |
| TGTGTTTGCGTTTCCTGTCA+TGG | 0.492509 | 7_2:-78125115 | Msa1079100:CDS |
| ACATCTACTCCCAAAACAAT+GGG | 0.494191 | 7_2:+78124904 | None:intergenic |
| CCGGTTGATAAAGCGGAGAA+AGG | 0.494425 | 7_2:-78124439 | Msa1079100:CDS |
| AATCATGTCGACCTTATTCA+AGG | 0.495710 | 7_2:+78125823 | None:intergenic |
| TTGGGAGTAGATGTCCTTCA+AGG | 0.497575 | 7_2:-78124895 | Msa1079100:CDS |
| AGGAACGGCAGAAAATGTTT+GGG | 0.497795 | 7_2:-78124042 | Msa1079100:CDS |
| ACAATAGAAATAACATATCT+GGG | 0.502360 | 7_2:+78125567 | None:intergenic |
| TGGCATGATCTTGAGAATGC+AGG | 0.505991 | 7_2:+78124951 | None:intergenic |
| AAGAAGAAGATGAATGAAGA+AGG | 0.510009 | 7_2:-78126247 | Msa1079100:intron |
| GAACTTGTAAGCCATAATAC+CGG | 0.511420 | 7_2:-78123998 | Msa1079100:CDS |
| ATTCCAAGTCAATCTTGAGC+AGG | 0.514170 | 7_2:-78125323 | Msa1079100:CDS |
| GCATTGATGCAGCAGTCTAA+GGG | 0.516752 | 7_2:-78125761 | Msa1079100:CDS |
| AATTATCACCAAACACAAGA+AGG | 0.519504 | 7_2:-78126300 | Msa1079100:CDS |
| GAAACAGGTTTCCGATAACT+AGG | 0.520468 | 7_2:+78126118 | None:intergenic |
| TGATGCTGAAAGACGTCTGC+TGG | 0.528325 | 7_2:-78125987 | Msa1079100:CDS |
| TTAATAGATTGAGTGAGTCT+GGG | 0.528397 | 7_2:+78125873 | None:intergenic |
| TCATGGTCACCTCTGAAGCT+TGG | 0.529642 | 7_2:-78125098 | Msa1079100:CDS |
| ATTGGAATTGGAGTTGGAGG+AGG | 0.530031 | 7_2:-78125641 | Msa1079100:CDS |
| CTACAGTCAACAAGCTGTGC+AGG | 0.530196 | 7_2:-78125507 | Msa1079100:intron |
| CCTGTTAGTGCTGTAAACAT+AGG | 0.535265 | 7_2:-78125204 | Msa1079100:CDS |
| CGGTTGATAAAGCGGAGAAA+GGG | 0.545541 | 7_2:-78124438 | Msa1079100:CDS |
| GACATCTACTCCCAAAACAA+TGG | 0.548436 | 7_2:+78124903 | None:intergenic |
| CGTCTTTCAGCATCACCAGC+AGG | 0.548747 | 7_2:+78125995 | None:intergenic |
| TCCTGTACATAAGAAGGATG+TGG | 0.551184 | 7_2:-78125181 | Msa1079100:CDS |
| TTGGTGATAATTGAATGTTA+TGG | 0.551332 | 7_2:+78126311 | None:intergenic |
| GTACGCATCACCTATGATGC+AGG | 0.551576 | 7_2:+78126096 | None:intergenic |
| AATCCTGCTCAAGATTGACT+TGG | 0.559695 | 7_2:+78125320 | None:intergenic |
| AAAGAAAGATTCTGCTGATG+AGG | 0.561211 | 7_2:-78124974 | Msa1079100:CDS |
| AGGTCGACATGATTCATGAC+TGG | 0.563144 | 7_2:-78125814 | Msa1079100:CDS |
| CCTTAAACCGGTTGATAAAG+CGG | 0.563826 | 7_2:-78124446 | Msa1079100:CDS |
| TATGGCATAGTGTTTGATCC+TGG | 0.566014 | 7_2:+78126329 | None:intergenic |
| ATTATGCATGATCATGATGA+TGG | 0.566083 | 7_2:-78125902 | Msa1079100:CDS |
| GATTGTTGGCAGCAATTCTG+AGG | 0.566245 | 7_2:-78124062 | Msa1079100:CDS |
| GTTTCTCAGTTCAAGACACA+CGG | 0.570872 | 7_2:-78125701 | Msa1079100:CDS |
| TTTAAGGTTATTCTCAATGG+AGG | 0.578938 | 7_2:+78124462 | None:intergenic |
| ACAAGTGCAATAAGTGGTGA+AGG | 0.579962 | 7_2:-78125593 | Msa1079100:CDS |
| TTCAAGATGACTTTCATACC+AGG | 0.585670 | 7_2:-78125736 | Msa1079100:CDS |
| ACATAAGAAGGATGTGGAGA+AGG | 0.587750 | 7_2:-78125175 | Msa1079100:CDS |
| TTGGCAGCAATTCTGAGGAA+CGG | 0.593050 | 7_2:-78124057 | Msa1079100:CDS |
| AGGATTGACACGACTCCTGA+GGG | 0.593387 | 7_2:-78125303 | Msa1079100:CDS |
| TCATTAGGCTTGACCACAGG+TGG | 0.596499 | 7_2:+78125354 | None:intergenic |
| GAGATTTATTCGTCCACCTG+TGG | 0.603555 | 7_2:-78125367 | Msa1079100:CDS |
| TGCAAGTTGCCAAGCTTCAG+AGG | 0.608001 | 7_2:+78125089 | None:intergenic |
| GCAAACACAACAGCATACTC+TGG | 0.609863 | 7_2:+78125129 | None:intergenic |
| ATCATAGGTGATGCGTACAC+TGG | 0.610292 | 7_2:-78126091 | Msa1079100:CDS |
| TTTATTATTAATGACTTACC+CGG | 0.612503 | 7_2:+78123979 | None:intergenic |
| AGAAACAAGCTTAGAGACCC+TGG | 0.621910 | 7_2:+78125718 | None:intergenic |
| TCATCATTAGGCTTGACCAC+AGG | 0.622043 | 7_2:+78125351 | None:intergenic |
| ATTATCACCAAACACAAGAA+GGG | 0.624373 | 7_2:-78126299 | Msa1079100:CDS |
| CAGGATTGACACGACTCCTG+AGG | 0.624798 | 7_2:-78125304 | Msa1079100:CDS |
| GGCATAGTGTTTGATCCTGG+TGG | 0.628523 | 7_2:+78126332 | None:intergenic |
| GGTTTCCGATAACTAGGCGG+CGG | 0.628612 | 7_2:+78126124 | None:intergenic |
| TTACATGAAAAGACTTAAGG+AGG | 0.633295 | 7_2:-78125001 | Msa1079100:CDS |
| AACGGCAGAAAATGTTTGGG+AGG | 0.637423 | 7_2:-78124039 | Msa1079100:CDS |
| GTGCCCACAAGTGCAATAAG+TGG | 0.639388 | 7_2:-78125599 | Msa1079100:CDS |
| AACTTGTAAGCCATAATACC+GGG | 0.643572 | 7_2:-78123997 | Msa1079100:CDS |
| TCGAATACAACCGAGAAGCA+TGG | 0.646439 | 7_2:+78126063 | None:intergenic |
| ATATTTGATATCTAGCCACC+AGG | 0.646564 | 7_2:-78126347 | None:intergenic |
| TTTCTCAGTTCAAGACACAC+GGG | 0.651312 | 7_2:-78125700 | Msa1079100:CDS |
| GTTGATAACGCACCAATTAG+GGG | 0.652792 | 7_2:-78125962 | Msa1079100:CDS |
| GATTGACACGACTCCTGAGG+GGG | 0.654054 | 7_2:-78125301 | Msa1079100:CDS |
| CTGCACAGCTTGTTGACTGT+AGG | 0.660778 | 7_2:+78125508 | None:intergenic |
| CTAACAGGAATATTGACTTG+TGG | 0.661965 | 7_2:+78125219 | None:intergenic |
| TCAAGATGACTTTCATACCA+GGG | 0.669658 | 7_2:-78125735 | Msa1079100:CDS |
| TATTCTCAATGGAGGCAATG+CGG | 0.721051 | 7_2:+78124470 | None:intergenic |
| GTTGTTGATGATGGAATATG+CGG | 0.722612 | 7_2:+78126025 | None:intergenic |
| GGATTGACACGACTCCTGAG+GGG | 0.733825 | 7_2:-78125302 | Msa1079100:CDS |
| ACAGGTTTCCGATAACTAGG+CGG | 0.768874 | 7_2:+78126121 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGATTGATTATTATTATTA+TGG | - | chr7_2:78124136-78124155 | Msa1079100:intron | 10.0% |
| !! | TTGATTGATTATTATTATTA+TGG | - | chr7_2:78124136-78124155 | Msa1079100:intron | 10.0% |
| !! | TATAAAAACAACAAAACTAT+TGG | - | chr7_2:78124678-78124697 | Msa1079100:intron | 15.0% |
| !!! | AATTAGCAATTCTATATTTT+CGG | - | chr7_2:78125606-78125625 | Msa1079100:CDS | 15.0% |
| !! | TATAAAAACAACAAAACTAT+TGG | - | chr7_2:78124678-78124697 | Msa1079100:intron | 15.0% |
| !!! | AATTAGCAATTCTATATTTT+CGG | - | chr7_2:78125606-78125625 | Msa1079100:CDS | 15.0% |
| !! | ACAATAGAAATAACATATCT+GGG | + | chr7_2:78124773-78124792 | None:intergenic | 20.0% |
| !! | AACAATAGAAATAACATATC+TGG | + | chr7_2:78124774-78124793 | None:intergenic | 20.0% |
| !!! | TGTTATTTCTATTGTTTAAG+TGG | - | chr7_2:78124778-78124797 | Msa1079100:intron | 20.0% |
| !! | ATAATAATAAGTGGGAAAAA+AGG | + | chr7_2:78124861-78124880 | None:intergenic | 20.0% |
| !!! | AAATAGATGATGCATTTTAA+CGG | + | chr7_2:78125302-78125321 | None:intergenic | 20.0% |
| !! | TTATTGTTGAAGACAAAATT+TGG | + | chr7_2:78125409-78125428 | None:intergenic | 20.0% |
| !!! | AAATTTTGTCTTCAACAATA+AGG | - | chr7_2:78125408-78125427 | Msa1079100:intron | 20.0% |
| !!! | ATTAGCAATTCTATATTTTC+GGG | - | chr7_2:78125607-78125626 | Msa1079100:CDS | 20.0% |
| !!! | ACTAGTTTATGATAAAACAA+CGG | + | chr7_2:78126109-78126128 | None:intergenic | 20.0% |
| !! | ACAATAGAAATAACATATCT+GGG | + | chr7_2:78124773-78124792 | None:intergenic | 20.0% |
| !! | AACAATAGAAATAACATATC+TGG | + | chr7_2:78124774-78124793 | None:intergenic | 20.0% |
| !!! | TGTTATTTCTATTGTTTAAG+TGG | - | chr7_2:78124778-78124797 | Msa1079100:intron | 20.0% |
| !! | ATAATAATAAGTGGGAAAAA+AGG | + | chr7_2:78124861-78124880 | None:intergenic | 20.0% |
| !!! | AAATAGATGATGCATTTTAA+CGG | + | chr7_2:78125302-78125321 | None:intergenic | 20.0% |
| !! | TTATTGTTGAAGACAAAATT+TGG | + | chr7_2:78125409-78125428 | None:intergenic | 20.0% |
| !!! | AAATTTTGTCTTCAACAATA+AGG | - | chr7_2:78125408-78125427 | Msa1079100:intron | 20.0% |
| !!! | ATTAGCAATTCTATATTTTC+GGG | - | chr7_2:78125607-78125626 | Msa1079100:CDS | 20.0% |
| !!! | ACTAGTTTATGATAAAACAA+CGG | + | chr7_2:78126109-78126128 | None:intergenic | 20.0% |
| !! | TTGGTGATAATTGAATGTTA+TGG | + | chr7_2:78124029-78124048 | None:intergenic | 25.0% |
| !!! | TCTATGTGATATTGCTATTT+TGG | - | chr7_2:78124404-78124423 | Msa1079100:intron | 25.0% |
| ! | AACAACAAAACTATTGGAAT+TGG | - | chr7_2:78124684-78124703 | Msa1079100:intron | 25.0% |
| ! | AATTGTGAATAATGGTGTAT+TGG | + | chr7_2:78124806-78124825 | None:intergenic | 25.0% |
| ! | GTAGGTAAAATTGTGAATAA+TGG | + | chr7_2:78124814-78124833 | None:intergenic | 25.0% |
| !! | TTTTGTGAAGGAATACAAAT+TGG | + | chr7_2:78125832-78125851 | None:intergenic | 25.0% |
| !! | ATATCAATGTTCTTTTGTGA+AGG | + | chr7_2:78125844-78125863 | None:intergenic | 25.0% |
| ! | TCACAAAAGAACATTGATAT+TGG | - | chr7_2:78125844-78125863 | Msa1079100:CDS | 25.0% |
| ! | ACAAAATTATTCCCCAATAA+AGG | - | chr7_2:78125983-78126002 | Msa1079100:CDS | 25.0% |
| ! | CAAAATTATTCCCCAATAAA+GGG | - | chr7_2:78125984-78126003 | Msa1079100:CDS | 25.0% |
| ! | TATCTCAAATTCCCTTTATT+GGG | + | chr7_2:78125998-78126017 | None:intergenic | 25.0% |
| ! | ATATCTCAAATTCCCTTTAT+TGG | + | chr7_2:78125999-78126018 | None:intergenic | 25.0% |
| !! | AATAAAGGGAATTTGAGATA+TGG | - | chr7_2:78125998-78126017 | Msa1079100:CDS | 25.0% |
| !!! | TTTTTCAACATCACAATCAT+AGG | + | chr7_2:78126043-78126062 | None:intergenic | 25.0% |
| !! | TTGGTGATAATTGAATGTTA+TGG | + | chr7_2:78124029-78124048 | None:intergenic | 25.0% |
| !!! | TCTATGTGATATTGCTATTT+TGG | - | chr7_2:78124404-78124423 | Msa1079100:intron | 25.0% |
| ! | AACAACAAAACTATTGGAAT+TGG | - | chr7_2:78124684-78124703 | Msa1079100:intron | 25.0% |
| ! | AATTGTGAATAATGGTGTAT+TGG | + | chr7_2:78124806-78124825 | None:intergenic | 25.0% |
| ! | GTAGGTAAAATTGTGAATAA+TGG | + | chr7_2:78124814-78124833 | None:intergenic | 25.0% |
| !! | TTTTGTGAAGGAATACAAAT+TGG | + | chr7_2:78125832-78125851 | None:intergenic | 25.0% |
| !! | ATATCAATGTTCTTTTGTGA+AGG | + | chr7_2:78125844-78125863 | None:intergenic | 25.0% |
| ! | TCACAAAAGAACATTGATAT+TGG | - | chr7_2:78125844-78125863 | Msa1079100:CDS | 25.0% |
| ! | ACAAAATTATTCCCCAATAA+AGG | - | chr7_2:78125983-78126002 | Msa1079100:CDS | 25.0% |
| ! | CAAAATTATTCCCCAATAAA+GGG | - | chr7_2:78125984-78126003 | Msa1079100:CDS | 25.0% |
| ! | TATCTCAAATTCCCTTTATT+GGG | + | chr7_2:78125998-78126017 | None:intergenic | 25.0% |
| ! | ATATCTCAAATTCCCTTTAT+TGG | + | chr7_2:78125999-78126018 | None:intergenic | 25.0% |
| !! | AATAAAGGGAATTTGAGATA+TGG | - | chr7_2:78125998-78126017 | Msa1079100:CDS | 25.0% |
| !!! | TTTTTCAACATCACAATCAT+AGG | + | chr7_2:78126043-78126062 | None:intergenic | 25.0% |
| AATTATCACCAAACACAAGA+AGG | - | chr7_2:78124037-78124056 | Msa1079100:CDS | 30.0% | |
| ATTATCACCAAACACAAGAA+GGG | - | chr7_2:78124038-78124057 | Msa1079100:CDS | 30.0% | |
| AAGAAGAAGATGAATGAAGA+AGG | - | chr7_2:78124090-78124109 | Msa1079100:intron | 30.0% | |
| ATTATGCATGATCATGATGA+TGG | - | chr7_2:78124435-78124454 | Msa1079100:CDS | 30.0% | |
| TTAATAGATTGAGTGAGTCT+GGG | + | chr7_2:78124467-78124486 | None:intergenic | 30.0% | |
| TTTAATAGATTGAGTGAGTC+TGG | + | chr7_2:78124468-78124487 | None:intergenic | 30.0% | |
| TTTCATTGTTGCCTTGAATA+AGG | - | chr7_2:78124503-78124522 | Msa1079100:CDS | 30.0% | |
| AAAACTATTGGAATTGGAGT+TGG | - | chr7_2:78124690-78124709 | Msa1079100:intron | 30.0% | |
| TTGGAATCCAAATCATCATT+AGG | + | chr7_2:78125001-78125020 | None:intergenic | 30.0% | |
| GACTTACATGAAAAGACTTA+AGG | - | chr7_2:78125333-78125352 | Msa1079100:CDS | 30.0% | |
| TTACATGAAAAGACTTAAGG+AGG | - | chr7_2:78125336-78125355 | Msa1079100:CDS | 30.0% | |
| ! | AATAAGGATCCCATTGTTTT+GGG | - | chr7_2:78125424-78125443 | Msa1079100:intron | 30.0% |
| ! | CATAACATCTTTTCTCATTG+TGG | - | chr7_2:78125490-78125509 | Msa1079100:intron | 30.0% |
| ! | TTGTTTTCTCTGCATTAGAT+TGG | - | chr7_2:78125534-78125553 | Msa1079100:CDS | 30.0% |
| ! | TGTTTTCTCTGCATTAGATT+GGG | - | chr7_2:78125535-78125554 | Msa1079100:CDS | 30.0% |
| ACACAAAGCATAAAACAGAA+TGG | + | chr7_2:78125675-78125694 | None:intergenic | 30.0% | |
| ! | TGCAATGCACAAAATTTGTT+TGG | - | chr7_2:78125760-78125779 | Msa1079100:CDS | 30.0% |
| ! | TTTAAGGTTATTCTCAATGG+AGG | + | chr7_2:78125878-78125897 | None:intergenic | 30.0% |
| CATTGAGAATAACCTTAAAC+CGG | - | chr7_2:78125879-78125898 | Msa1079100:CDS | 30.0% | |
| ATCTCAAATTCCCTTTATTG+GGG | + | chr7_2:78125997-78126016 | None:intergenic | 30.0% | |
| CGGCTACAAATAACTTAAAA+CGG | + | chr7_2:78126089-78126108 | None:intergenic | 30.0% | |
| TCTTAATGTTCTGTTCAACT+TGG | - | chr7_2:78126246-78126265 | Msa1079100:intron | 30.0% | |
| AATTATCACCAAACACAAGA+AGG | - | chr7_2:78124037-78124056 | Msa1079100:CDS | 30.0% | |
| ATTATCACCAAACACAAGAA+GGG | - | chr7_2:78124038-78124057 | Msa1079100:CDS | 30.0% | |
| AAGAAGAAGATGAATGAAGA+AGG | - | chr7_2:78124090-78124109 | Msa1079100:intron | 30.0% | |
| ATTATGCATGATCATGATGA+TGG | - | chr7_2:78124435-78124454 | Msa1079100:CDS | 30.0% | |
| TTAATAGATTGAGTGAGTCT+GGG | + | chr7_2:78124467-78124486 | None:intergenic | 30.0% | |
| TTTAATAGATTGAGTGAGTC+TGG | + | chr7_2:78124468-78124487 | None:intergenic | 30.0% | |
| TTTCATTGTTGCCTTGAATA+AGG | - | chr7_2:78124503-78124522 | Msa1079100:CDS | 30.0% | |
| AAAACTATTGGAATTGGAGT+TGG | - | chr7_2:78124690-78124709 | Msa1079100:intron | 30.0% | |
| TTGGAATCCAAATCATCATT+AGG | + | chr7_2:78125001-78125020 | None:intergenic | 30.0% | |
| GACTTACATGAAAAGACTTA+AGG | - | chr7_2:78125333-78125352 | Msa1079100:CDS | 30.0% | |
| TTACATGAAAAGACTTAAGG+AGG | - | chr7_2:78125336-78125355 | Msa1079100:CDS | 30.0% | |
| ! | AATAAGGATCCCATTGTTTT+GGG | - | chr7_2:78125424-78125443 | Msa1079100:intron | 30.0% |
| ! | CATAACATCTTTTCTCATTG+TGG | - | chr7_2:78125490-78125509 | Msa1079100:intron | 30.0% |
| ! | TTGTTTTCTCTGCATTAGAT+TGG | - | chr7_2:78125534-78125553 | Msa1079100:CDS | 30.0% |
| ! | TGTTTTCTCTGCATTAGATT+GGG | - | chr7_2:78125535-78125554 | Msa1079100:CDS | 30.0% |
| ACACAAAGCATAAAACAGAA+TGG | + | chr7_2:78125675-78125694 | None:intergenic | 30.0% | |
| ! | TGCAATGCACAAAATTTGTT+TGG | - | chr7_2:78125760-78125779 | Msa1079100:CDS | 30.0% |
| ! | TTTAAGGTTATTCTCAATGG+AGG | + | chr7_2:78125878-78125897 | None:intergenic | 30.0% |
| CATTGAGAATAACCTTAAAC+CGG | - | chr7_2:78125879-78125898 | Msa1079100:CDS | 30.0% | |
| ATCTCAAATTCCCTTTATTG+GGG | + | chr7_2:78125997-78126016 | None:intergenic | 30.0% | |
| CGGCTACAAATAACTTAAAA+CGG | + | chr7_2:78126089-78126108 | None:intergenic | 30.0% | |
| TCTTAATGTTCTGTTCAACT+TGG | - | chr7_2:78126246-78126265 | Msa1079100:intron | 30.0% | |
| ! | CGATTAGGGTTTCTTTTGAT+CGG | + | chr7_2:78124065-78124084 | None:intergenic | 35.0% |
| ! | TGCTTTGAATGTTTCTTTCC+AGG | - | chr7_2:78124174-78124193 | Msa1079100:intron | 35.0% |
| !! | GTTGTTGATGATGGAATATG+CGG | + | chr7_2:78124315-78124334 | None:intergenic | 35.0% |
| ! | GGAAAATGTGTTGTTGATGA+TGG | + | chr7_2:78124324-78124343 | None:intergenic | 35.0% |
| !! | TTGTTGATAACGCACCAATT+AGG | - | chr7_2:78124373-78124392 | Msa1079100:intron | 35.0% |
| !! | TGTTGATAACGCACCAATTA+GGG | - | chr7_2:78124374-78124393 | Msa1079100:intron | 35.0% |
| CATAGATATGAACCCCTAAT+TGG | + | chr7_2:78124390-78124409 | None:intergenic | 35.0% | |
| GGCAACAATGAAATGTTTGT+TGG | + | chr7_2:78124496-78124515 | None:intergenic | 35.0% | |
| AATCATGTCGACCTTATTCA+AGG | + | chr7_2:78124517-78124536 | None:intergenic | 35.0% | |
| TGCATCAATGCTTTACGAAA+TGG | + | chr7_2:78124567-78124586 | None:intergenic | 35.0% | |
| TTCAAGATGACTTTCATACC+AGG | - | chr7_2:78124601-78124620 | Msa1079100:intron | 35.0% | |
| TCAAGATGACTTTCATACCA+GGG | - | chr7_2:78124602-78124621 | Msa1079100:intron | 35.0% | |
| TGCATGTAACTTTCACTCAT+TGG | - | chr7_2:78125069-78125088 | Msa1079100:CDS | 35.0% | |
| !! | CTAACAGGAATATTGACTTG+TGG | + | chr7_2:78125121-78125140 | None:intergenic | 35.0% |
| AAAGAAAGATTCTGCTGATG+AGG | - | chr7_2:78125363-78125382 | Msa1079100:CDS | 35.0% | |
| ! | CAATAAGGATCCCATTGTTT+TGG | - | chr7_2:78125423-78125442 | Msa1079100:intron | 35.0% |
| ACATCTACTCCCAAAACAAT+GGG | + | chr7_2:78125436-78125455 | None:intergenic | 35.0% | |
| ATACCTTCAAAATGCCTTGA+AGG | + | chr7_2:78125459-78125478 | None:intergenic | 35.0% | |
| ! | GTTTTCTCTGCATTAGATTG+GGG | - | chr7_2:78125536-78125555 | Msa1079100:CDS | 35.0% |
| !! | AATTCTATATTTTCGGGCCT+TGG | - | chr7_2:78125613-78125632 | Msa1079100:CDS | 35.0% |
| !! | ATTCTATATTTTCGGGCCTT+GGG | - | chr7_2:78125614-78125633 | Msa1079100:CDS | 35.0% |
| TGTGTTCTTATGTATCAGAC+TGG | - | chr7_2:78125690-78125709 | Msa1079100:CDS | 35.0% | |
| ATATTGTCTGCTTGACAGAT+TGG | - | chr7_2:78125802-78125821 | Msa1079100:CDS | 35.0% | |
| ! | CGGTTTAAGGTTATTCTCAA+TGG | + | chr7_2:78125881-78125900 | None:intergenic | 35.0% |
| TTTGTGAGTTCAGAGAAGTT+TGG | + | chr7_2:78125968-78125987 | None:intergenic | 35.0% | |
| CATCACAATCATAGGCATAA+AGG | + | chr7_2:78126035-78126054 | None:intergenic | 35.0% | |
| CACGTGTAAATCAGTGAAAT+TGG | + | chr7_2:78126163-78126182 | None:intergenic | 35.0% | |
| AGAGAAATAAAACTGTGCAG+AGG | - | chr7_2:78126211-78126230 | Msa1079100:intron | 35.0% | |
| !!! | AAATGTTTGGGAGGCATTTT+TGG | - | chr7_2:78126307-78126326 | Msa1079100:CDS | 35.0% |
| GAACTTGTAAGCCATAATAC+CGG | - | chr7_2:78126339-78126358 | Msa1079100:CDS | 35.0% | |
| AACTTGTAAGCCATAATACC+GGG | - | chr7_2:78126340-78126359 | Msa1079100:CDS | 35.0% | |
| ! | CGATTAGGGTTTCTTTTGAT+CGG | + | chr7_2:78124065-78124084 | None:intergenic | 35.0% |
| ! | TGCTTTGAATGTTTCTTTCC+AGG | - | chr7_2:78124174-78124193 | Msa1079100:intron | 35.0% |
| !! | GTTGTTGATGATGGAATATG+CGG | + | chr7_2:78124315-78124334 | None:intergenic | 35.0% |
| ! | GGAAAATGTGTTGTTGATGA+TGG | + | chr7_2:78124324-78124343 | None:intergenic | 35.0% |
| !! | TTGTTGATAACGCACCAATT+AGG | - | chr7_2:78124373-78124392 | Msa1079100:intron | 35.0% |
| !! | TGTTGATAACGCACCAATTA+GGG | - | chr7_2:78124374-78124393 | Msa1079100:intron | 35.0% |
| CATAGATATGAACCCCTAAT+TGG | + | chr7_2:78124390-78124409 | None:intergenic | 35.0% | |
| GGCAACAATGAAATGTTTGT+TGG | + | chr7_2:78124496-78124515 | None:intergenic | 35.0% | |
| AATCATGTCGACCTTATTCA+AGG | + | chr7_2:78124517-78124536 | None:intergenic | 35.0% | |
| TGCATCAATGCTTTACGAAA+TGG | + | chr7_2:78124567-78124586 | None:intergenic | 35.0% | |
| TTCAAGATGACTTTCATACC+AGG | - | chr7_2:78124601-78124620 | Msa1079100:intron | 35.0% | |
| TCAAGATGACTTTCATACCA+GGG | - | chr7_2:78124602-78124621 | Msa1079100:intron | 35.0% | |
| TGCATGTAACTTTCACTCAT+TGG | - | chr7_2:78125069-78125088 | Msa1079100:CDS | 35.0% | |
| !! | CTAACAGGAATATTGACTTG+TGG | + | chr7_2:78125121-78125140 | None:intergenic | 35.0% |
| AAAGAAAGATTCTGCTGATG+AGG | - | chr7_2:78125363-78125382 | Msa1079100:CDS | 35.0% | |
| ! | CAATAAGGATCCCATTGTTT+TGG | - | chr7_2:78125423-78125442 | Msa1079100:intron | 35.0% |
| ACATCTACTCCCAAAACAAT+GGG | + | chr7_2:78125436-78125455 | None:intergenic | 35.0% | |
| ATACCTTCAAAATGCCTTGA+AGG | + | chr7_2:78125459-78125478 | None:intergenic | 35.0% | |
| ! | GTTTTCTCTGCATTAGATTG+GGG | - | chr7_2:78125536-78125555 | Msa1079100:CDS | 35.0% |
| !! | AATTCTATATTTTCGGGCCT+TGG | - | chr7_2:78125613-78125632 | Msa1079100:CDS | 35.0% |
| !! | ATTCTATATTTTCGGGCCTT+GGG | - | chr7_2:78125614-78125633 | Msa1079100:CDS | 35.0% |
| TGTGTTCTTATGTATCAGAC+TGG | - | chr7_2:78125690-78125709 | Msa1079100:CDS | 35.0% | |
| ATATTGTCTGCTTGACAGAT+TGG | - | chr7_2:78125802-78125821 | Msa1079100:CDS | 35.0% | |
| ! | CGGTTTAAGGTTATTCTCAA+TGG | + | chr7_2:78125881-78125900 | None:intergenic | 35.0% |
| TTTGTGAGTTCAGAGAAGTT+TGG | + | chr7_2:78125968-78125987 | None:intergenic | 35.0% | |
| CATCACAATCATAGGCATAA+AGG | + | chr7_2:78126035-78126054 | None:intergenic | 35.0% | |
| CACGTGTAAATCAGTGAAAT+TGG | + | chr7_2:78126163-78126182 | None:intergenic | 35.0% | |
| AGAGAAATAAAACTGTGCAG+AGG | - | chr7_2:78126211-78126230 | Msa1079100:intron | 35.0% | |
| !!! | AAATGTTTGGGAGGCATTTT+TGG | - | chr7_2:78126307-78126326 | Msa1079100:CDS | 35.0% |
| GAACTTGTAAGCCATAATAC+CGG | - | chr7_2:78126339-78126358 | Msa1079100:CDS | 35.0% | |
| AACTTGTAAGCCATAATACC+GGG | - | chr7_2:78126340-78126359 | Msa1079100:CDS | 35.0% | |
| TATGGCATAGTGTTTGATCC+TGG | + | chr7_2:78124011-78124030 | None:intergenic | 40.0% | |
| CTTCTTCTTCGATGCGATTA+GGG | + | chr7_2:78124079-78124098 | None:intergenic | 40.0% | |
| TCTTCTTCTTCGATGCGATT+AGG | + | chr7_2:78124080-78124099 | None:intergenic | 40.0% | |
| GAAACAGGTTTCCGATAACT+AGG | + | chr7_2:78124222-78124241 | None:intergenic | 40.0% | |
| AAACCTGTTTCCTGCATCAT+AGG | - | chr7_2:78124231-78124250 | Msa1079100:intron | 40.0% | |
| ! | TCAACAACACATTTTCCTGC+TGG | - | chr7_2:78124327-78124346 | Msa1079100:intron | 40.0% |
| !! | GTTGATAACGCACCAATTAG+GGG | - | chr7_2:78124375-78124394 | Msa1079100:intron | 40.0% |
| ! | GCTTTACGAAATGGAGCATT+GGG | + | chr7_2:78124558-78124577 | None:intergenic | 40.0% |
| TGCTTTACGAAATGGAGCAT+TGG | + | chr7_2:78124559-78124578 | None:intergenic | 40.0% | |
| GTTTCTCAGTTCAAGACACA+CGG | - | chr7_2:78124636-78124655 | Msa1079100:intron | 40.0% | |
| TTTCTCAGTTCAAGACACAC+GGG | - | chr7_2:78124637-78124656 | Msa1079100:intron | 40.0% | |
| ACTATTGGAATTGGAGTTGG+AGG | - | chr7_2:78124693-78124712 | Msa1079100:intron | 40.0% | |
| TCACCACTTATTGCACTTGT+GGG | + | chr7_2:78124744-78124763 | None:intergenic | 40.0% | |
| TTCACCACTTATTGCACTTG+TGG | + | chr7_2:78124745-78124764 | None:intergenic | 40.0% | |
| ACAAGTGCAATAAGTGGTGA+AGG | - | chr7_2:78124744-78124763 | Msa1079100:intron | 40.0% | |
| GGTCAAGCCTAATGATGATT+TGG | - | chr7_2:78124991-78125010 | Msa1079100:CDS | 40.0% | |
| ATTCCAAGTCAATCTTGAGC+AGG | - | chr7_2:78125014-78125033 | Msa1079100:CDS | 40.0% | |
| AATCCTGCTCAAGATTGACT+TGG | + | chr7_2:78125020-78125039 | None:intergenic | 40.0% | |
| CCTATGTTTACAGCACTAAC+AGG | + | chr7_2:78125136-78125155 | None:intergenic | 40.0% | |
| CCTGTTAGTGCTGTAAACAT+AGG | - | chr7_2:78125133-78125152 | Msa1079100:CDS | 40.0% | |
| CATAGGTCCTGTACATAAGA+AGG | - | chr7_2:78125150-78125169 | Msa1079100:CDS | 40.0% | |
| TCCTGTACATAAGAAGGATG+TGG | - | chr7_2:78125156-78125175 | Msa1079100:CDS | 40.0% | |
| TCCACATCCTTCTTATGTAC+AGG | + | chr7_2:78125160-78125179 | None:intergenic | 40.0% | |
| ACATAAGAAGGATGTGGAGA+AGG | - | chr7_2:78125162-78125181 | Msa1079100:CDS | 40.0% | |
| TTGGCAACTTGCACACAAAT+TGG | - | chr7_2:78125258-78125277 | Msa1079100:CDS | 40.0% | |
| TGGCAACTTGCACACAAATT+GGG | - | chr7_2:78125259-78125278 | Msa1079100:CDS | 40.0% | |
| GACATCTACTCCCAAAACAA+TGG | + | chr7_2:78125437-78125456 | None:intergenic | 40.0% | |
| !! | TGTCCTTCAAGGCATTTTGA+AGG | - | chr7_2:78125453-78125472 | Msa1079100:intron | 40.0% |
| ! | GTTGCATCTGTATTTGAGAC+AGG | - | chr7_2:78125583-78125602 | Msa1079100:CDS | 40.0% |
| TAGGTTAGGTTAACAGTAGG+AGG | + | chr7_2:78125649-78125668 | None:intergenic | 40.0% | |
| TCCTACTGTTAACCTAACCT+AGG | - | chr7_2:78125648-78125667 | Msa1079100:CDS | 40.0% | |
| ACCTAGGTTAGGTTAACAGT+AGG | + | chr7_2:78125652-78125671 | None:intergenic | 40.0% | |
| AAACAGAATGGACCTAGGTT+AGG | + | chr7_2:78125663-78125682 | None:intergenic | 40.0% | |
| GCATAAAACAGAATGGACCT+AGG | + | chr7_2:78125668-78125687 | None:intergenic | 40.0% | |
| ACCAAAACAGACATCCAAGA+CGG | + | chr7_2:78125717-78125736 | None:intergenic | 40.0% | |
| !!! | TGTCTGTTTTGGTCGTAATG+AGG | - | chr7_2:78125724-78125743 | Msa1079100:CDS | 40.0% |
| !!! | GTCTGTTTTGGTCGTAATGA+GGG | - | chr7_2:78125725-78125744 | Msa1079100:CDS | 40.0% |
| TATTCTCAATGGAGGCAATG+CGG | + | chr7_2:78125870-78125889 | None:intergenic | 40.0% | |
| !! | CCTTAAACCGGTTGATAAAG+CGG | - | chr7_2:78125891-78125910 | Msa1079100:CDS | 40.0% |
| ACGTGCTCGATATTTAGATG+TGG | - | chr7_2:78126178-78126197 | Msa1079100:intron | 40.0% | |
| !! | CAACTTGGTTTGCAGATTGT+TGG | - | chr7_2:78126261-78126280 | Msa1079100:CDS | 40.0% |
| AGGAACGGCAGAAAATGTTT+GGG | - | chr7_2:78126295-78126314 | Msa1079100:CDS | 40.0% | |
| TATGGCATAGTGTTTGATCC+TGG | + | chr7_2:78124011-78124030 | None:intergenic | 40.0% | |
| CTTCTTCTTCGATGCGATTA+GGG | + | chr7_2:78124079-78124098 | None:intergenic | 40.0% | |
| TCTTCTTCTTCGATGCGATT+AGG | + | chr7_2:78124080-78124099 | None:intergenic | 40.0% | |
| GAAACAGGTTTCCGATAACT+AGG | + | chr7_2:78124222-78124241 | None:intergenic | 40.0% | |
| AAACCTGTTTCCTGCATCAT+AGG | - | chr7_2:78124231-78124250 | Msa1079100:intron | 40.0% | |
| ! | TCAACAACACATTTTCCTGC+TGG | - | chr7_2:78124327-78124346 | Msa1079100:intron | 40.0% |
| !! | GTTGATAACGCACCAATTAG+GGG | - | chr7_2:78124375-78124394 | Msa1079100:intron | 40.0% |
| ! | GCTTTACGAAATGGAGCATT+GGG | + | chr7_2:78124558-78124577 | None:intergenic | 40.0% |
| TGCTTTACGAAATGGAGCAT+TGG | + | chr7_2:78124559-78124578 | None:intergenic | 40.0% | |
| GTTTCTCAGTTCAAGACACA+CGG | - | chr7_2:78124636-78124655 | Msa1079100:intron | 40.0% | |
| TTTCTCAGTTCAAGACACAC+GGG | - | chr7_2:78124637-78124656 | Msa1079100:intron | 40.0% | |
| ACTATTGGAATTGGAGTTGG+AGG | - | chr7_2:78124693-78124712 | Msa1079100:intron | 40.0% | |
| TCACCACTTATTGCACTTGT+GGG | + | chr7_2:78124744-78124763 | None:intergenic | 40.0% | |
| TTCACCACTTATTGCACTTG+TGG | + | chr7_2:78124745-78124764 | None:intergenic | 40.0% | |
| ACAAGTGCAATAAGTGGTGA+AGG | - | chr7_2:78124744-78124763 | Msa1079100:intron | 40.0% | |
| GGTCAAGCCTAATGATGATT+TGG | - | chr7_2:78124991-78125010 | Msa1079100:CDS | 40.0% | |
| ATTCCAAGTCAATCTTGAGC+AGG | - | chr7_2:78125014-78125033 | Msa1079100:CDS | 40.0% | |
| AATCCTGCTCAAGATTGACT+TGG | + | chr7_2:78125020-78125039 | None:intergenic | 40.0% | |
| CCTATGTTTACAGCACTAAC+AGG | + | chr7_2:78125136-78125155 | None:intergenic | 40.0% | |
| CCTGTTAGTGCTGTAAACAT+AGG | - | chr7_2:78125133-78125152 | Msa1079100:CDS | 40.0% | |
| CATAGGTCCTGTACATAAGA+AGG | - | chr7_2:78125150-78125169 | Msa1079100:CDS | 40.0% | |
| TCCTGTACATAAGAAGGATG+TGG | - | chr7_2:78125156-78125175 | Msa1079100:CDS | 40.0% | |
| TCCACATCCTTCTTATGTAC+AGG | + | chr7_2:78125160-78125179 | None:intergenic | 40.0% | |
| ACATAAGAAGGATGTGGAGA+AGG | - | chr7_2:78125162-78125181 | Msa1079100:CDS | 40.0% | |
| TTGGCAACTTGCACACAAAT+TGG | - | chr7_2:78125258-78125277 | Msa1079100:CDS | 40.0% | |
| TGGCAACTTGCACACAAATT+GGG | - | chr7_2:78125259-78125278 | Msa1079100:CDS | 40.0% | |
| GACATCTACTCCCAAAACAA+TGG | + | chr7_2:78125437-78125456 | None:intergenic | 40.0% | |
| !! | TGTCCTTCAAGGCATTTTGA+AGG | - | chr7_2:78125453-78125472 | Msa1079100:intron | 40.0% |
| ! | GTTGCATCTGTATTTGAGAC+AGG | - | chr7_2:78125583-78125602 | Msa1079100:CDS | 40.0% |
| TAGGTTAGGTTAACAGTAGG+AGG | + | chr7_2:78125649-78125668 | None:intergenic | 40.0% | |
| TCCTACTGTTAACCTAACCT+AGG | - | chr7_2:78125648-78125667 | Msa1079100:CDS | 40.0% | |
| ACCTAGGTTAGGTTAACAGT+AGG | + | chr7_2:78125652-78125671 | None:intergenic | 40.0% | |
| AAACAGAATGGACCTAGGTT+AGG | + | chr7_2:78125663-78125682 | None:intergenic | 40.0% | |
| GCATAAAACAGAATGGACCT+AGG | + | chr7_2:78125668-78125687 | None:intergenic | 40.0% | |
| ACCAAAACAGACATCCAAGA+CGG | + | chr7_2:78125717-78125736 | None:intergenic | 40.0% | |
| !!! | TGTCTGTTTTGGTCGTAATG+AGG | - | chr7_2:78125724-78125743 | Msa1079100:CDS | 40.0% |
| !!! | GTCTGTTTTGGTCGTAATGA+GGG | - | chr7_2:78125725-78125744 | Msa1079100:CDS | 40.0% |
| TATTCTCAATGGAGGCAATG+CGG | + | chr7_2:78125870-78125889 | None:intergenic | 40.0% | |
| !! | CCTTAAACCGGTTGATAAAG+CGG | - | chr7_2:78125891-78125910 | Msa1079100:CDS | 40.0% |
| ACGTGCTCGATATTTAGATG+TGG | - | chr7_2:78126178-78126197 | Msa1079100:intron | 40.0% | |
| !! | CAACTTGGTTTGCAGATTGT+TGG | - | chr7_2:78126261-78126280 | Msa1079100:CDS | 40.0% |
| AGGAACGGCAGAAAATGTTT+GGG | - | chr7_2:78126295-78126314 | Msa1079100:CDS | 40.0% | |
| ACAGGTTTCCGATAACTAGG+CGG | + | chr7_2:78124219-78124238 | None:intergenic | 45.0% | |
| TCACCTATGATGCAGGAAAC+AGG | + | chr7_2:78124237-78124256 | None:intergenic | 45.0% | |
| ATCATAGGTGATGCGTACAC+TGG | - | chr7_2:78124246-78124265 | Msa1079100:intron | 45.0% | |
| ACTGGCAAAACCATGCTTCT+CGG | - | chr7_2:78124264-78124283 | Msa1079100:intron | 45.0% | |
| TCGAATACAACCGAGAAGCA+TGG | + | chr7_2:78124277-78124296 | None:intergenic | 45.0% | |
| ATGCTTCTCGGTTGTATTCG+AGG | - | chr7_2:78124276-78124295 | Msa1079100:intron | 45.0% | |
| AGGTCGACATGATTCATGAC+TGG | - | chr7_2:78124523-78124542 | Msa1079100:intron | 45.0% | |
| !! | AGCATTGATGCAGCAGTCTA+AGG | - | chr7_2:78124575-78124594 | Msa1079100:intron | 45.0% |
| ! | GCATTGATGCAGCAGTCTAA+GGG | - | chr7_2:78124576-78124595 | Msa1079100:intron | 45.0% |
| AGAAACAAGCTTAGAGACCC+TGG | + | chr7_2:78124622-78124641 | None:intergenic | 45.0% | |
| ATTGGAATTGGAGTTGGAGG+AGG | - | chr7_2:78124696-78124715 | Msa1079100:intron | 45.0% | |
| GAGATTTATTCGTCCACCTG+TGG | - | chr7_2:78124970-78124989 | Msa1079100:CDS | 45.0% | |
| TCATCATTAGGCTTGACCAC+AGG | + | chr7_2:78124989-78125008 | None:intergenic | 45.0% | |
| GCAAACACAACAGCATACTC+TGG | + | chr7_2:78125211-78125230 | None:intergenic | 45.0% | |
| TGTGTTTGCGTTTCCTGTCA+TGG | - | chr7_2:78125222-78125241 | Msa1079100:CDS | 45.0% | |
| TGGCATGATCTTGAGAATGC+AGG | + | chr7_2:78125389-78125408 | None:intergenic | 45.0% | |
| TTGGGAGTAGATGTCCTTCA+AGG | - | chr7_2:78125442-78125461 | Msa1079100:intron | 45.0% | |
| TAGGAGGATAAACGTACCCA+AGG | + | chr7_2:78125633-78125652 | None:intergenic | 45.0% | |
| ! | TCCGTCTTGGATGTCTGTTT+TGG | - | chr7_2:78125713-78125732 | Msa1079100:CDS | 45.0% |
| ! | CCGCTTTATCAACCGGTTTA+AGG | + | chr7_2:78125894-78125913 | None:intergenic | 45.0% |
| CCTTTCTCCGCTTTATCAAC+CGG | + | chr7_2:78125901-78125920 | None:intergenic | 45.0% | |
| !! | CGGTTGATAAAGCGGAGAAA+GGG | - | chr7_2:78125899-78125918 | Msa1079100:CDS | 45.0% |
| AGGGCAGCAAGTAGTCATTA+AGG | - | chr7_2:78125918-78125937 | Msa1079100:CDS | 45.0% | |
| GATTGTTGGCAGCAATTCTG+AGG | - | chr7_2:78126275-78126294 | Msa1079100:CDS | 45.0% | |
| ! | TTGGCAGCAATTCTGAGGAA+CGG | - | chr7_2:78126280-78126299 | Msa1079100:CDS | 45.0% |
| GAGGAACGGCAGAAAATGTT+TGG | - | chr7_2:78126294-78126313 | Msa1079100:CDS | 45.0% | |
| AACGGCAGAAAATGTTTGGG+AGG | - | chr7_2:78126298-78126317 | Msa1079100:CDS | 45.0% | |
| ACAGGTTTCCGATAACTAGG+CGG | + | chr7_2:78124219-78124238 | None:intergenic | 45.0% | |
| TCACCTATGATGCAGGAAAC+AGG | + | chr7_2:78124237-78124256 | None:intergenic | 45.0% | |
| ATCATAGGTGATGCGTACAC+TGG | - | chr7_2:78124246-78124265 | Msa1079100:intron | 45.0% | |
| ACTGGCAAAACCATGCTTCT+CGG | - | chr7_2:78124264-78124283 | Msa1079100:intron | 45.0% | |
| TCGAATACAACCGAGAAGCA+TGG | + | chr7_2:78124277-78124296 | None:intergenic | 45.0% | |
| ATGCTTCTCGGTTGTATTCG+AGG | - | chr7_2:78124276-78124295 | Msa1079100:intron | 45.0% | |
| AGGTCGACATGATTCATGAC+TGG | - | chr7_2:78124523-78124542 | Msa1079100:intron | 45.0% | |
| !! | AGCATTGATGCAGCAGTCTA+AGG | - | chr7_2:78124575-78124594 | Msa1079100:intron | 45.0% |
| ! | GCATTGATGCAGCAGTCTAA+GGG | - | chr7_2:78124576-78124595 | Msa1079100:intron | 45.0% |
| AGAAACAAGCTTAGAGACCC+TGG | + | chr7_2:78124622-78124641 | None:intergenic | 45.0% | |
| ATTGGAATTGGAGTTGGAGG+AGG | - | chr7_2:78124696-78124715 | Msa1079100:intron | 45.0% | |
| GAGATTTATTCGTCCACCTG+TGG | - | chr7_2:78124970-78124989 | Msa1079100:CDS | 45.0% | |
| TCATCATTAGGCTTGACCAC+AGG | + | chr7_2:78124989-78125008 | None:intergenic | 45.0% | |
| GCAAACACAACAGCATACTC+TGG | + | chr7_2:78125211-78125230 | None:intergenic | 45.0% | |
| TGTGTTTGCGTTTCCTGTCA+TGG | - | chr7_2:78125222-78125241 | Msa1079100:CDS | 45.0% | |
| TGGCATGATCTTGAGAATGC+AGG | + | chr7_2:78125389-78125408 | None:intergenic | 45.0% | |
| TTGGGAGTAGATGTCCTTCA+AGG | - | chr7_2:78125442-78125461 | Msa1079100:intron | 45.0% | |
| TAGGAGGATAAACGTACCCA+AGG | + | chr7_2:78125633-78125652 | None:intergenic | 45.0% | |
| ! | TCCGTCTTGGATGTCTGTTT+TGG | - | chr7_2:78125713-78125732 | Msa1079100:CDS | 45.0% |
| ! | CCGCTTTATCAACCGGTTTA+AGG | + | chr7_2:78125894-78125913 | None:intergenic | 45.0% |
| CCTTTCTCCGCTTTATCAAC+CGG | + | chr7_2:78125901-78125920 | None:intergenic | 45.0% | |
| !! | CGGTTGATAAAGCGGAGAAA+GGG | - | chr7_2:78125899-78125918 | Msa1079100:CDS | 45.0% |
| AGGGCAGCAAGTAGTCATTA+AGG | - | chr7_2:78125918-78125937 | Msa1079100:CDS | 45.0% | |
| GATTGTTGGCAGCAATTCTG+AGG | - | chr7_2:78126275-78126294 | Msa1079100:CDS | 45.0% | |
| ! | TTGGCAGCAATTCTGAGGAA+CGG | - | chr7_2:78126280-78126299 | Msa1079100:CDS | 45.0% |
| GAGGAACGGCAGAAAATGTT+TGG | - | chr7_2:78126294-78126313 | Msa1079100:CDS | 45.0% | |
| AACGGCAGAAAATGTTTGGG+AGG | - | chr7_2:78126298-78126317 | Msa1079100:CDS | 45.0% | |
| !! | TAATAATAATAATAATAAGT+GGG | + | chr7_2:78124869-78124888 | None:intergenic | 5.0% |
| !! | ATAATAATAATAATAATAAG+TGG | + | chr7_2:78124870-78124889 | None:intergenic | 5.0% |
| !! | TAATAATAATAATAATAAGT+GGG | + | chr7_2:78124869-78124888 | None:intergenic | 5.0% |
| !! | ATAATAATAATAATAATAAG+TGG | + | chr7_2:78124870-78124889 | None:intergenic | 5.0% |
| GGCATAGTGTTTGATCCTGG+TGG | + | chr7_2:78124008-78124027 | None:intergenic | 50.0% | |
| GATCGGACCCTTCTTGTGTT+TGG | + | chr7_2:78124048-78124067 | None:intergenic | 50.0% | |
| GTACGCATCACCTATGATGC+AGG | + | chr7_2:78124244-78124263 | None:intergenic | 50.0% | |
| TGATGCTGAAAGACGTCTGC+TGG | - | chr7_2:78124350-78124369 | Msa1079100:intron | 50.0% | |
| GTGCCCACAAGTGCAATAAG+TGG | - | chr7_2:78124738-78124757 | Msa1079100:intron | 50.0% | |
| !! | CTGCACAGCTTGTTGACTGT+AGG | + | chr7_2:78124832-78124851 | None:intergenic | 50.0% |
| CTACAGTCAACAAGCTGTGC+AGG | - | chr7_2:78124830-78124849 | Msa1079100:intron | 50.0% | |
| TCATTAGGCTTGACCACAGG+TGG | + | chr7_2:78124986-78125005 | None:intergenic | 50.0% | |
| AGGATTGACACGACTCCTGA+GGG | - | chr7_2:78125034-78125053 | Msa1079100:CDS | 50.0% | |
| !! | TCATGGTCACCTCTGAAGCT+TGG | - | chr7_2:78125239-78125258 | Msa1079100:CDS | 50.0% |
| TGCAAGTTGCCAAGCTTCAG+AGG | + | chr7_2:78125251-78125270 | None:intergenic | 50.0% | |
| ! | TGTATCAGACTGGTCCGTCT+TGG | - | chr7_2:78125700-78125719 | Msa1079100:CDS | 50.0% |
| !! | CCGGTTGATAAAGCGGAGAA+AGG | - | chr7_2:78125898-78125917 | Msa1079100:CDS | 50.0% |
| GGCATAGTGTTTGATCCTGG+TGG | + | chr7_2:78124008-78124027 | None:intergenic | 50.0% | |
| GATCGGACCCTTCTTGTGTT+TGG | + | chr7_2:78124048-78124067 | None:intergenic | 50.0% | |
| GTACGCATCACCTATGATGC+AGG | + | chr7_2:78124244-78124263 | None:intergenic | 50.0% | |
| TGATGCTGAAAGACGTCTGC+TGG | - | chr7_2:78124350-78124369 | Msa1079100:intron | 50.0% | |
| GTGCCCACAAGTGCAATAAG+TGG | - | chr7_2:78124738-78124757 | Msa1079100:intron | 50.0% | |
| !! | CTGCACAGCTTGTTGACTGT+AGG | + | chr7_2:78124832-78124851 | None:intergenic | 50.0% |
| CTACAGTCAACAAGCTGTGC+AGG | - | chr7_2:78124830-78124849 | Msa1079100:intron | 50.0% | |
| TCATTAGGCTTGACCACAGG+TGG | + | chr7_2:78124986-78125005 | None:intergenic | 50.0% | |
| AGGATTGACACGACTCCTGA+GGG | - | chr7_2:78125034-78125053 | Msa1079100:CDS | 50.0% | |
| !! | TCATGGTCACCTCTGAAGCT+TGG | - | chr7_2:78125239-78125258 | Msa1079100:CDS | 50.0% |
| TGCAAGTTGCCAAGCTTCAG+AGG | + | chr7_2:78125251-78125270 | None:intergenic | 50.0% | |
| ! | TGTATCAGACTGGTCCGTCT+TGG | - | chr7_2:78125700-78125719 | Msa1079100:CDS | 50.0% |
| !! | CCGGTTGATAAAGCGGAGAA+AGG | - | chr7_2:78125898-78125917 | Msa1079100:CDS | 50.0% |
| GGCGGCTTAACAGTATCACC+TGG | + | chr7_2:78124195-78124214 | None:intergenic | 55.0% | |
| GGTTTCCGATAACTAGGCGG+CGG | + | chr7_2:78124216-78124235 | None:intergenic | 55.0% | |
| CGTCTTTCAGCATCACCAGC+AGG | + | chr7_2:78124345-78124364 | None:intergenic | 55.0% | |
| CAGGATTGACACGACTCCTG+AGG | - | chr7_2:78125033-78125052 | Msa1079100:CDS | 55.0% | |
| GGATTGACACGACTCCTGAG+GGG | - | chr7_2:78125035-78125054 | Msa1079100:CDS | 55.0% | |
| GATTGACACGACTCCTGAGG+GGG | - | chr7_2:78125036-78125055 | Msa1079100:CDS | 55.0% | |
| ! | GCATTGACACAAACCCCCTC+AGG | + | chr7_2:78125052-78125071 | None:intergenic | 55.0% |
| GCTTCAGAGGTGACCATGAC+AGG | + | chr7_2:78125238-78125257 | None:intergenic | 55.0% | |
| GGCGGCTTAACAGTATCACC+TGG | + | chr7_2:78124195-78124214 | None:intergenic | 55.0% | |
| GGTTTCCGATAACTAGGCGG+CGG | + | chr7_2:78124216-78124235 | None:intergenic | 55.0% | |
| CGTCTTTCAGCATCACCAGC+AGG | + | chr7_2:78124345-78124364 | None:intergenic | 55.0% | |
| CAGGATTGACACGACTCCTG+AGG | - | chr7_2:78125033-78125052 | Msa1079100:CDS | 55.0% | |
| GGATTGACACGACTCCTGAG+GGG | - | chr7_2:78125035-78125054 | Msa1079100:CDS | 55.0% | |
| GATTGACACGACTCCTGAGG+GGG | - | chr7_2:78125036-78125055 | Msa1079100:CDS | 55.0% | |
| ! | GCATTGACACAAACCCCCTC+AGG | + | chr7_2:78125052-78125071 | None:intergenic | 55.0% |
| GCTTCAGAGGTGACCATGAC+AGG | + | chr7_2:78125238-78125257 | None:intergenic | 55.0% | |
| TTCCGATAACTAGGCGGCGG+CGG | + | chr7_2:78124213-78124232 | None:intergenic | 60.0% | |
| TTCCGATAACTAGGCGGCGG+CGG | + | chr7_2:78124213-78124232 | None:intergenic | 60.0% | |
| AGCCGCCGCCGCCTAGTTAT+CGG | - | chr7_2:78124208-78124227 | Msa1079100:intron | 65.0% | |
| AGCCGCCGCCGCCTAGTTAT+CGG | - | chr7_2:78124208-78124227 | Msa1079100:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 78123994 | 78126365 | 78123994 | ID=Msa1079100;Name=Msa1079100 |
| chr7_2 | mRNA | 78123994 | 78126365 | 78123994 | ID=Msa1079100-mRNA-1;Parent=Msa1079100;Name=Msa1079100-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|1|0.2|1|1|1|5|0|495 |
| chr7_2 | exon | 78126248 | 78126365 | 78126248 | ID=Msa1079100-mRNA-1:exon:19431;Parent=Msa1079100-mRNA-1 |
| chr7_2 | exon | 78125508 | 78126163 | 78125508 | ID=Msa1079100-mRNA-1:exon:19430;Parent=Msa1079100-mRNA-1 |
| chr7_2 | exon | 78124885 | 78125388 | 78124885 | ID=Msa1079100-mRNA-1:exon:19429;Parent=Msa1079100-mRNA-1 |
| chr7_2 | exon | 78124420 | 78124539 | 78124420 | ID=Msa1079100-mRNA-1:exon:19428;Parent=Msa1079100-mRNA-1 |
| chr7_2 | exon | 78123994 | 78124083 | 78123994 | ID=Msa1079100-mRNA-1:exon:19427;Parent=Msa1079100-mRNA-1 |
| chr7_2 | CDS | 78126248 | 78126365 | 78126248 | ID=Msa1079100-mRNA-1:cds;Parent=Msa1079100-mRNA-1 |
| chr7_2 | CDS | 78125508 | 78126163 | 78125508 | ID=Msa1079100-mRNA-1:cds;Parent=Msa1079100-mRNA-1 |
| chr7_2 | CDS | 78124885 | 78125388 | 78124885 | ID=Msa1079100-mRNA-1:cds;Parent=Msa1079100-mRNA-1 |
| chr7_2 | CDS | 78124420 | 78124539 | 78124420 | ID=Msa1079100-mRNA-1:cds;Parent=Msa1079100-mRNA-1 |
| chr7_2 | CDS | 78123994 | 78124083 | 78123994 | ID=Msa1079100-mRNA-1:cds;Parent=Msa1079100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
