Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1051850 | sp|Q8VZ20|ASR3_ARATH | 48.159 | 353 | 136 | 9 | 1 | 345 | 1 | 314 | 1.60e-95 | 289 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1051850 | G7KSV7 | 97.391 | 345 | 5 | 1 | 1 | 345 | 1 | 341 | 0.0 | 682 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1051850 | TF | Trihelix |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa1051850 | 0.815179 | 1.055747e-51 | -8.615850e-47 |
| Msa0032470 | Msa1051850 | 0.803380 | 3.583963e-49 | -8.615850e-47 |
| Msa0604290 | Msa1051850 | 0.833446 | 5.309009e-56 | -8.615850e-47 |
| Msa0616860 | Msa1051850 | -0.806832 | 6.791716e-50 | -8.615850e-47 |
| Msa0641130 | Msa1051850 | 0.802211 | 6.248124e-49 | -8.615850e-47 |
| Msa0732050 | Msa1051850 | 0.806672 | 7.341273e-50 | -8.615850e-47 |
| Msa0750850 | Msa1051850 | 0.810176 | 1.312883e-50 | -8.615850e-47 |
| Msa0769970 | Msa1051850 | 0.800418 | 1.455036e-48 | -8.615850e-47 |
| Msa0138020 | Msa1051850 | 0.810667 | 1.028462e-50 | -8.615850e-47 |
| Msa0189030 | Msa1051850 | 0.805163 | 1.524007e-49 | -8.615850e-47 |
| Msa0196670 | Msa1051850 | 0.803010 | 4.275565e-49 | -8.615850e-47 |
| Msa0388730 | Msa1051850 | 0.831319 | 1.786070e-55 | -8.615850e-47 |
| Msa0431900 | Msa1051850 | 0.800447 | 1.435019e-48 | -8.615850e-47 |
| Msa1023310 | Msa1051850 | 0.812967 | 3.247658e-51 | -8.615850e-47 |
| Msa1029050 | Msa1051850 | 0.803326 | 3.677744e-49 | -8.615850e-47 |
| Msa1051850 | Msa1062040 | 0.830117 | 3.517153e-55 | -8.615850e-47 |
| Msa1051850 | Msa1071320 | 0.801840 | 7.448444e-49 | -8.615850e-47 |
| Msa1051850 | Msa1081790 | -0.833543 | 5.021298e-56 | -8.615850e-47 |
| Msa1051850 | Msa1096950 | 0.924174 | 1.001368e-89 | -8.615850e-47 |
| Msa1051850 | Msa1107200 | 0.837326 | 5.554287e-57 | -8.615850e-47 |
| Msa1051850 | Msa1127080 | -0.803345 | 3.644758e-49 | -8.615850e-47 |
| Msa1051850 | Msa1140230 | 0.846120 | 2.650972e-59 | -8.615850e-47 |
| Msa1051850 | Msa1150780 | 0.830868 | 2.305040e-55 | -8.615850e-47 |
| Msa1051850 | Msa1166090 | -0.846078 | 2.721736e-59 | -8.615850e-47 |
| Msa1051850 | Msa1176720 | 0.804956 | 1.683872e-49 | -8.615850e-47 |
| Msa1051850 | Msa1207310 | 0.806866 | 6.680229e-50 | -8.615850e-47 |
| Msa1051850 | Msa1208380 | 0.821200 | 4.581486e-53 | -8.615850e-47 |
| Msa1051850 | Msa1231840 | 0.811250 | 7.689522e-51 | -8.615850e-47 |
| Msa1051850 | Msa1280340 | 0.811535 | 6.670328e-51 | -8.615850e-47 |
| Msa1051850 | Msa1316360 | 0.807309 | 5.382052e-50 | -8.615850e-47 |
| Msa1051850 | Msa1329200 | 0.807193 | 5.697511e-50 | -8.615850e-47 |
| Msa1051850 | Msa1346840 | 0.805188 | 1.505615e-49 | -8.615850e-47 |
| Msa1051850 | Msa1396400 | -0.846315 | 2.346238e-59 | -8.615850e-47 |
| Msa1051850 | Msa1401990 | 0.808603 | 2.855949e-50 | -8.615850e-47 |
| Msa1051850 | Msa1437730 | 0.808724 | 2.690963e-50 | -8.615850e-47 |
| Msa0305410 | Msa1051850 | 0.801789 | 7.627973e-49 | -8.615850e-47 |
| Msa0542560 | Msa1051850 | 0.834457 | 2.964141e-56 | -8.615850e-47 |
| Msa0545050 | Msa1051850 | 0.821398 | 4.124766e-53 | -8.615850e-47 |
| Msa0562750 | Msa1051850 | -0.802701 | 4.951392e-49 | -8.615850e-47 |
| Msa0600590 | Msa1051850 | 0.811270 | 7.614477e-51 | -8.615850e-47 |
| Msa0861570 | Msa1051850 | 0.800173 | 1.631578e-48 | -8.615850e-47 |
| Msa0878220 | Msa1051850 | 0.801821 | 7.513015e-49 | -8.615850e-47 |
| Msa0943970 | Msa1051850 | 0.805275 | 1.443808e-49 | -8.615850e-47 |
| Msa0944020 | Msa1051850 | 0.829452 | 5.107180e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1051850 | MtrunA17_Chr7g0221451 | 97.110 | 346 | 5 | 2 | 1 | 345 | 1 | 342 | 0.0 | 679 |
| Msa1051850 | MtrunA17_Chr1g0211061 | 66.667 | 351 | 76 | 10 | 1 | 345 | 1 | 316 | 1.44e-137 | 393 |
| Msa1051850 | MtrunA17_Chr8g0385751 | 35.484 | 341 | 167 | 10 | 36 | 345 | 43 | 361 | 5.29e-54 | 181 |
| Msa1051850 | MtrunA17_Chr1g0199044 | 29.730 | 148 | 64 | 5 | 41 | 148 | 56 | 203 | 1.36e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1051850 | AT2G33550.1 | 48.159 | 353 | 136 | 9 | 1 | 345 | 1 | 314 | 1.63e-96 | 289 |
| Msa1051850 | AT4G31270.1 | 33.913 | 115 | 70 | 1 | 39 | 153 | 17 | 125 | 1.39e-16 | 79.3 |
| Msa1051850 | AT2G35640.1 | 34.711 | 121 | 62 | 5 | 41 | 148 | 22 | 138 | 3.12e-12 | 67.4 |
Find 113 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGATGTAGAGCCCGTTTC+TGG | 0.174990 | 7_2:+19519351 | None:intergenic |
| ACAGTTCCATCATCGGAATT+AGG | 0.210777 | 7_2:+19522791 | None:intergenic |
| TTGGACTAGGCAGGAGATTT+TGG | 0.244674 | 7_2:-19522693 | Msa1051850:CDS |
| GATAAAGGAGTGGGAGAGTC+AGG | 0.272993 | 7_2:-19522489 | Msa1051850:CDS |
| AAACCGGGTCGGAATGGGTC+TGG | 0.281955 | 7_2:-19522632 | Msa1051850:CDS |
| CAGTTCCATCATCGGAATTA+GGG | 0.288650 | 7_2:+19522792 | None:intergenic |
| TTCATATTTATGATAGTAAT+AGG | 0.301580 | 7_2:-19522259 | Msa1051850:CDS |
| GGCTGGTTGTTTCTCATTGT+TGG | 0.301660 | 7_2:+19519380 | None:intergenic |
| TTTCATTCACTTTATGGCTT+TGG | 0.307015 | 7_2:-19522825 | None:intergenic |
| GGTCGGAATGGGTCTGGGTT+TGG | 0.340314 | 7_2:-19522626 | Msa1051850:CDS |
| TTCAATGTCACTAGCATTGA+TGG | 0.340534 | 7_2:-19521513 | Msa1051850:intron |
| GAATGTGTCGGTGTCGGTTT+CGG | 0.345627 | 7_2:-19522306 | Msa1051850:CDS |
| CTCTTCATTGCCGTCTCCAT+TGG | 0.349024 | 7_2:+19519299 | None:intergenic |
| TTCCTTCTCCTTGGCAGCCT+CGG | 0.354622 | 7_2:+19521316 | None:intergenic |
| GGCAGCATCGGTTGTTGTTC+CGG | 0.362479 | 7_2:-19522330 | Msa1051850:CDS |
| TCCATCCTCGCCACCGTTCA+CGG | 0.362719 | 7_2:+19522739 | None:intergenic |
| TCCGATGATGGAACTGTTAA+CGG | 0.379041 | 7_2:-19522785 | Msa1051850:CDS |
| GGCTGCAGCTGTGGCAGCAT+CGG | 0.381376 | 7_2:-19522342 | Msa1051850:CDS |
| CATTCCGACCCGGTTTGAAC+CGG | 0.381786 | 7_2:+19522639 | None:intergenic |
| GAAGAAACCAACGCCCATTT+CGG | 0.382737 | 7_2:+19522593 | None:intergenic |
| GAGATGAAACGGAGTCGTTT+TGG | 0.385379 | 7_2:-19522463 | Msa1051850:CDS |
| TTGCAGTTTCATTCTGCTGC+TGG | 0.394241 | 7_2:+19519175 | None:intergenic |
| CCCGTTTCTGGATTCGAGGC+TGG | 0.399420 | 7_2:+19519363 | None:intergenic |
| GTAAGAAACACGGTGTGAAC+CGG | 0.402207 | 7_2:-19522565 | Msa1051850:CDS |
| TAGTCAATTAATTGATGTAT+TGG | 0.403614 | 7_2:-19519262 | Msa1051850:CDS |
| AACCGGGTCGGAATGGGTCT+GGG | 0.403971 | 7_2:-19522631 | Msa1051850:CDS |
| TTGGTTCGAGTGAACCGAAA+TGG | 0.407548 | 7_2:-19522607 | Msa1051850:CDS |
| CCATCATCGGAATTAGGGTT+TGG | 0.414944 | 7_2:+19522797 | None:intergenic |
| TGCTGAAAGCCGGTTCAAAC+CGG | 0.422601 | 7_2:-19522648 | Msa1051850:CDS |
| GATGCTAAGTGAACAATTAG+AGG | 0.427523 | 7_2:-19519226 | Msa1051850:CDS |
| CGGAGATTATAAGAAGATAA+AGG | 0.430532 | 7_2:-19522504 | Msa1051850:CDS |
| CTTGAGCATTTCCTTCTCCT+TGG | 0.433995 | 7_2:+19521307 | None:intergenic |
| CTTTATCTTCTTATAATCTC+CGG | 0.440339 | 7_2:+19522505 | None:intergenic |
| GATAAGCTTGCAAATGCTCT+TGG | 0.446812 | 7_2:-19519132 | Msa1051850:CDS |
| GCCGTCGATGGCGGTGGCAG+CGG | 0.449844 | 7_2:-19522363 | Msa1051850:CDS |
| GTCGGTGTCGGTTTCGGAGA+CGG | 0.458922 | 7_2:-19522300 | Msa1051850:CDS |
| AGGAAAGTGAGTGGTGAGGA+TGG | 0.468097 | 7_2:-19522239 | Msa1051850:CDS |
| CATCTCAAGGGGAACGTAAG+AGG | 0.469277 | 7_2:-19519335 | Msa1051850:CDS |
| CGGTTCAAACCGGGTCGGAA+TGG | 0.469834 | 7_2:-19522638 | Msa1051850:CDS |
| TCGGTTTCGGAGACGGTTGG+AGG | 0.471862 | 7_2:-19522293 | Msa1051850:CDS |
| GGTTCAAACCGGGTCGGAAT+GGG | 0.472434 | 7_2:-19522637 | Msa1051850:CDS |
| GGAGACGGTTGGAGGGGATG+AGG | 0.473755 | 7_2:-19522285 | Msa1051850:CDS |
| GCCGCTGCCACCGCCATCGA+CGG | 0.475194 | 7_2:+19522362 | None:intergenic |
| CCAAACCCTAATTCCGATGA+TGG | 0.478565 | 7_2:-19522797 | Msa1051850:CDS |
| TGGTTCGAGTGAACCGAAAT+GGG | 0.480374 | 7_2:-19522606 | Msa1051850:CDS |
| ACCAGCCTCGAATCCAGAAA+CGG | 0.487810 | 7_2:-19519364 | Msa1051850:CDS |
| CACCGCTTCCTACACTGAAT+CGG | 0.488900 | 7_2:+19522539 | None:intergenic |
| GCCGTGAACGGTGGCGAGGA+TGG | 0.493423 | 7_2:-19522740 | Msa1051850:CDS |
| GGTGGCAGCGGCTGCAGCTG+TGG | 0.495633 | 7_2:-19522351 | Msa1051850:CDS |
| CTCGCCACCGTTCACGGCGG+AGG | 0.497849 | 7_2:+19522745 | None:intergenic |
| TCCGGTGAATGTGTCGGTGT+CGG | 0.501303 | 7_2:-19522312 | Msa1051850:CDS |
| CGAGGCTGCCACGTTGGACT+AGG | 0.508267 | 7_2:-19522706 | Msa1051850:CDS |
| GGAATGATTTGAGGAGAGAG+AGG | 0.508729 | 7_2:-19522433 | Msa1051850:CDS |
| GAGTCAGGTGAGAGATGAAA+CGG | 0.509162 | 7_2:-19522474 | Msa1051850:CDS |
| CCACTCCTCCGAGGCTGCCA+AGG | 0.511072 | 7_2:-19521324 | Msa1051850:CDS |
| GGTTGATGAGGAATGATTTG+AGG | 0.515241 | 7_2:-19522442 | Msa1051850:CDS |
| CCAGCCTCGAATCCAGAAAC+GGG | 0.515344 | 7_2:-19519363 | Msa1051850:CDS |
| TAAGAAACACGGTGTGAACC+GGG | 0.516907 | 7_2:-19522564 | Msa1051850:CDS |
| GTGTCGGTTTCGGAGACGGT+TGG | 0.520719 | 7_2:-19522296 | Msa1051850:CDS |
| CTCCGAGGCTGCCAAGGAGA+AGG | 0.523413 | 7_2:-19521318 | Msa1051850:CDS |
| CGGTTTCGGAGACGGTTGGA+GGG | 0.523976 | 7_2:-19522292 | Msa1051850:CDS |
| TGATTCGCCGTCGATGGCGG+TGG | 0.527873 | 7_2:-19522369 | Msa1051850:CDS |
| AGGAGAGAGAGGAAATTGCC+TGG | 0.529803 | 7_2:-19522422 | Msa1051850:CDS |
| AGAGCCCGTTTCTGGATTCG+AGG | 0.531658 | 7_2:+19519359 | None:intergenic |
| ACCGACACCGACACATTCAC+CGG | 0.534766 | 7_2:+19522311 | None:intergenic |
| ACCGTTAACAGTTCCATCAT+CGG | 0.535210 | 7_2:+19522784 | None:intergenic |
| GATACTTGATTCGCCGTCGA+TGG | 0.535395 | 7_2:-19522375 | Msa1051850:CDS |
| TTATAAGAAGATAAAGGAGT+GGG | 0.535976 | 7_2:-19522498 | Msa1051850:CDS |
| GAAACGGGCTCTACATCTCA+AGG | 0.544821 | 7_2:-19519348 | Msa1051850:CDS |
| CCACCGTTCACGGCGGAGGA+CGG | 0.551882 | 7_2:+19522749 | None:intergenic |
| CTTCTCCTTGGCAGCCTCGG+AGG | 0.552038 | 7_2:+19521319 | None:intergenic |
| ATTATAAGAAGATAAAGGAG+TGG | 0.554162 | 7_2:-19522499 | Msa1051850:CDS |
| AAGGGGAACGTAAGAGGAAG+CGG | 0.555390 | 7_2:-19519329 | Msa1051850:CDS |
| GGTTTCGGAGACGGTTGGAG+GGG | 0.562864 | 7_2:-19522291 | Msa1051850:CDS |
| GAAAGAGTGATGCTGAAAGC+CGG | 0.563160 | 7_2:-19522658 | Msa1051850:CDS |
| CCGTCCTCCGCCGTGAACGG+TGG | 0.563465 | 7_2:-19522749 | Msa1051850:CDS |
| AACCCAGACCCATTCCGACC+CGG | 0.563556 | 7_2:+19522629 | None:intergenic |
| TCCTACACTGAATCGGACCC+CGG | 0.566040 | 7_2:+19522546 | None:intergenic |
| GACGGTTGGAGGGGATGAGG+AGG | 0.566380 | 7_2:-19522282 | Msa1051850:CDS |
| AGGAAGCGGTTCGCAACCAA+TGG | 0.566583 | 7_2:-19519315 | Msa1051850:CDS |
| CCACCGTCCTCCGCCGTGAA+CGG | 0.574662 | 7_2:-19522752 | Msa1051850:CDS |
| CAACGGCGAGGCTGCCACGT+TGG | 0.578495 | 7_2:-19522712 | Msa1051850:CDS |
| CGATTCAGTGTAGGAAGCGG+TGG | 0.579523 | 7_2:-19522538 | Msa1051850:CDS |
| GCTGAAAGCCGGTTCAAACC+GGG | 0.579950 | 7_2:-19522647 | Msa1051850:CDS |
| GAGTGAACCGAAATGGGCGT+TGG | 0.586856 | 7_2:-19522600 | Msa1051850:CDS |
| CTCCGCCGTGAACGGTGGCG+AGG | 0.588326 | 7_2:-19522744 | Msa1051850:CDS |
| GTCCGATTCAGTGTAGGAAG+CGG | 0.593847 | 7_2:-19522541 | Msa1051850:CDS |
| AAGCGGTGGAGCAACCTCGC+CGG | 0.597218 | 7_2:-19522524 | Msa1051850:CDS |
| CAATGGAGACGGCAATGAAG+AGG | 0.604269 | 7_2:-19519298 | Msa1051850:CDS |
| GGAAAGTGAGTGGTGAGGAT+GGG | 0.605368 | 7_2:-19522238 | Msa1051850:CDS |
| TGTTGTTCCGGTGAATGTGT+CGG | 0.606938 | 7_2:-19522318 | Msa1051850:CDS |
| TAATAGGAAAGTGAGTGGTG+AGG | 0.611943 | 7_2:-19522243 | Msa1051850:CDS |
| GGAGAGAGAGGAAATTGCCT+GGG | 0.612198 | 7_2:-19522421 | Msa1051850:CDS |
| ACTTGATTCGCCGTCGATGG+CGG | 0.613112 | 7_2:-19522372 | Msa1051850:CDS |
| CGGTTCGCAACCAATGGAGA+CGG | 0.613454 | 7_2:-19519309 | Msa1051850:CDS |
| CCGTTCACGGCGGAGGACGG+TGG | 0.619410 | 7_2:+19522752 | None:intergenic |
| AAACGGGCTCTACATCTCAA+GGG | 0.623139 | 7_2:-19519347 | Msa1051850:CDS |
| CAAGGAGAAGGAAATGCTCA+AGG | 0.623679 | 7_2:-19521306 | Msa1051850:intron |
| GATGGAACTGTTAACGGTAA+CGG | 0.629880 | 7_2:-19522779 | Msa1051850:CDS |
| AACGGGCTCTACATCTCAAG+GGG | 0.641332 | 7_2:-19519346 | Msa1051850:CDS |
| TGGAGACGGCAATGAAGAGG+AGG | 0.641529 | 7_2:-19519295 | Msa1051850:CDS |
| TCTTCGTATTGTAAGAAACA+CGG | 0.643626 | 7_2:-19522575 | Msa1051850:CDS |
| GATAGTAATAGGAAAGTGAG+TGG | 0.654357 | 7_2:-19522248 | Msa1051850:CDS |
| ACCTCCTTATCAAAATACCC+AGG | 0.654771 | 7_2:+19522404 | None:intergenic |
| TGGCGAGGATGGAAAACCAA+CGG | 0.670801 | 7_2:-19522729 | Msa1051850:CDS |
| TCTTCTTATAATCTCCGGCG+AGG | 0.675112 | 7_2:+19522510 | None:intergenic |
| ACCGGGGTCCGATTCAGTGT+AGG | 0.687179 | 7_2:-19522547 | Msa1051850:CDS |
| AAGAAACACGGTGTGAACCG+GGG | 0.696776 | 7_2:-19522563 | Msa1051850:CDS |
| AAAGCCGGTTCAAACCGGGT+CGG | 0.703772 | 7_2:-19522643 | Msa1051850:CDS |
| AGGATGGAAAACCAACGGCG+AGG | 0.725001 | 7_2:-19522724 | Msa1051850:CDS |
| ATCTCCTGCCTAGTCCAACG+TGG | 0.727740 | 7_2:+19522698 | None:intergenic |
| CAGTTTCTACCACTCCTCCG+AGG | 0.732051 | 7_2:-19521333 | Msa1051850:CDS |
| ATCCTCGCCACCGTTCACGG+CGG | 0.733386 | 7_2:+19522742 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATATTTATGATAGTAAT+AGG | - | chr7_2:19519663-19519682 | Msa1051850:intron | 15.0% |
| !!! | TTTTAGATTGAAATTGTTTT+CGG | - | chr7_2:19519977-19519996 | Msa1051850:intron | 15.0% |
| !! | ATTTAAATAATTACAGCTAT+TGG | - | chr7_2:19520087-19520106 | Msa1051850:intron | 15.0% |
| !! | TTTAAATAATTACAGCTATT+GGG | - | chr7_2:19520088-19520107 | Msa1051850:intron | 15.0% |
| !! | TATATAATAGTGTTAATTAC+AGG | - | chr7_2:19520297-19520316 | Msa1051850:intron | 15.0% |
| !! | GATTTCAATCATTAAATTTA+TGG | + | chr7_2:19520988-19521007 | None:intergenic | 15.0% |
| !! | AAATTTAATGATTGAAATCA+TGG | - | chr7_2:19520989-19521008 | Msa1051850:intron | 15.0% |
| !! | GAATTAACAAAATTTCAAAA+TGG | - | chr7_2:19521962-19521981 | Msa1051850:intron | 15.0% |
| !! | ATAAGCTTATACAATCAAAA+AGG | + | chr7_2:19519921-19519940 | None:intergenic | 20.0% |
| !!! | TTTAGATTGAAATTGTTTTC+GGG | - | chr7_2:19519978-19519997 | Msa1051850:intron | 20.0% |
| !! | TTAAATAATTACAGCTATTG+GGG | - | chr7_2:19520089-19520108 | Msa1051850:intron | 20.0% |
| !!! | TCATTTTTTTGAATAATCAC+AGG | - | chr7_2:19520180-19520199 | Msa1051850:intron | 20.0% |
| !! | AATAAAAAAACAGTACAGTA+TGG | + | chr7_2:19520437-19520456 | None:intergenic | 20.0% |
| !!! | AGTGTTTTATGTTTTAAAGT+TGG | - | chr7_2:19520464-19520483 | Msa1051850:intron | 20.0% |
| !!! | TTTTATGTTTTAAAGTTGGA+GGG | - | chr7_2:19520468-19520487 | Msa1051850:intron | 20.0% |
| !!! | GTTTTAATACTAGAATGATA+TGG | - | chr7_2:19520687-19520706 | Msa1051850:intron | 20.0% |
| !! | GATAAATATATGATTTACCA+CGG | + | chr7_2:19521215-19521234 | None:intergenic | 20.0% |
| !! | AACAAACATAAAACAAATGA+TGG | + | chr7_2:19521503-19521522 | None:intergenic | 20.0% |
| !!! | ATATTATCACTTTTCATGAA+TGG | - | chr7_2:19522384-19522403 | Msa1051850:CDS | 20.0% |
| !!! | ATACATTCCTTTACTTTTAT+AGG | - | chr7_2:19522517-19522536 | Msa1051850:CDS | 20.0% |
| !! | TAGTCAATTAATTGATGTAT+TGG | - | chr7_2:19522660-19522679 | Msa1051850:CDS | 20.0% |
| ! | CTTTATCTTCTTATAATCTC+CGG | + | chr7_2:19519420-19519439 | None:intergenic | 25.0% |
| ! | ATTATAAGAAGATAAAGGAG+TGG | - | chr7_2:19519423-19519442 | Msa1051850:intron | 25.0% |
| ! | TTATAAGAAGATAAAGGAGT+GGG | - | chr7_2:19519424-19519443 | Msa1051850:intron | 25.0% |
| ! | NNNNNNNCTGATATAGGAAC+AGG | + | chr7_2:19519773-19519792 | None:intergenic | 25.0% |
| !!! | NNGTTGGTTATTTTGTTTCA+TGG | - | chr7_2:19519884-19519903 | Msa1051850:intron | 25.0% |
| !! | TTAGATTGAAATTGTTTTCG+GGG | - | chr7_2:19519979-19519998 | Msa1051850:intron | 25.0% |
| ! | TAAATAATTACAGCTATTGG+GGG | - | chr7_2:19520090-19520109 | Msa1051850:intron | 25.0% |
| ! | TAGTGTTAATTACAGGTATT+AGG | - | chr7_2:19520304-19520323 | Msa1051850:intron | 25.0% |
| ! | AGTGTTAATTACAGGTATTA+GGG | - | chr7_2:19520305-19520324 | Msa1051850:intron | 25.0% |
| ! | TTGAAACACTGCAATTTAAT+AGG | + | chr7_2:19520394-19520413 | None:intergenic | 25.0% |
| !!! | GTTTTATGTTTTAAAGTTGG+AGG | - | chr7_2:19520467-19520486 | Msa1051850:intron | 25.0% |
| ! | TTAATAATCAAGGACAACAA+CGG | + | chr7_2:19520538-19520557 | None:intergenic | 25.0% |
| ! | AAGGTAAATAGTGTTCTTAA+TGG | - | chr7_2:19520635-19520654 | Msa1051850:intron | 25.0% |
| ! | TCGTTCTTATGTGATATATT+TGG | - | chr7_2:19520736-19520755 | Msa1051850:intron | 25.0% |
| ! | CGTTCTTATGTGATATATTT+GGG | - | chr7_2:19520737-19520756 | Msa1051850:intron | 25.0% |
| !!! | AATCCAAAGGTTTTAAATCT+TGG | - | chr7_2:19521015-19521034 | Msa1051850:intron | 25.0% |
| ! | CTCTCAAATCATAATAATAC+TGG | + | chr7_2:19521239-19521258 | None:intergenic | 25.0% |
| ! | TGACCTTATATTTGTTTGTT+TGG | - | chr7_2:19521262-19521281 | Msa1051850:intron | 25.0% |
| ! | TGTCCAAACAAACAAATATA+AGG | + | chr7_2:19521268-19521287 | None:intergenic | 25.0% |
| ! | TATATTTGTTTGTTTGGACA+TGG | - | chr7_2:19521268-19521287 | Msa1051850:intron | 25.0% |
| ! | TATAATAGGTACTAAGTTTG+GGG | + | chr7_2:19521333-19521352 | None:intergenic | 25.0% |
| ! | CTATAATAGGTACTAAGTTT+GGG | + | chr7_2:19521334-19521353 | None:intergenic | 25.0% |
| ! | ACTATAATAGGTACTAAGTT+TGG | + | chr7_2:19521335-19521354 | None:intergenic | 25.0% |
| !! | AGAAGATAGCTTTCATATTT+TGG | + | chr7_2:19521386-19521405 | None:intergenic | 25.0% |
| ! | AATTAACCAAAATTCATCTG+CGG | + | chr7_2:19521559-19521578 | None:intergenic | 25.0% |
| !! | TTTTTCTGCTATTGCATTTT+TGG | - | chr7_2:19521619-19521638 | Msa1051850:intron | 25.0% |
| !! | TTTTCTGCTATTGCATTTTT+GGG | - | chr7_2:19521620-19521639 | Msa1051850:intron | 25.0% |
| ! | ATCAAATTAACTTAGAGTTG+AGG | + | chr7_2:19521938-19521957 | None:intergenic | 25.0% |
| !! | TCTCTAACAATAGTTTTCTT+TGG | - | chr7_2:19521985-19522004 | Msa1051850:intron | 25.0% |
| ! | AACTTCAGAAACGAAATTAA+CGG | + | chr7_2:19522013-19522032 | None:intergenic | 25.0% |
| ! | TGAACTTCCTTATGAATAAA+TGG | - | chr7_2:19522209-19522228 | Msa1051850:CDS | 25.0% |
| !! | AAGCTTTAATTATGCCATAA+AGG | - | chr7_2:19522427-19522446 | Msa1051850:CDS | 25.0% |
| ! | TTTAATTATGCCATAAAGGT+AGG | - | chr7_2:19522431-19522450 | Msa1051850:CDS | 25.0% |
| ! | ATTGATGTATTGGAGAAAAA+TGG | - | chr7_2:19522670-19522689 | Msa1051850:CDS | 25.0% |
| ! | TTGATGTATTGGAGAAAAAT+GGG | - | chr7_2:19522671-19522690 | Msa1051850:CDS | 25.0% |
| !!! | GAGATTTTGGTTTTGATACA+GGG | - | chr7_2:19519242-19519261 | Msa1051850:CDS | 30.0% |
| TCTTCGTATTGTAAGAAACA+CGG | - | chr7_2:19519347-19519366 | Msa1051850:CDS | 30.0% | |
| CGGAGATTATAAGAAGATAA+AGG | - | chr7_2:19519418-19519437 | Msa1051850:intron | 30.0% | |
| !! | GTTGTTTTCTGATTTTGAGA+AGG | - | chr7_2:19519706-19519725 | Msa1051850:intron | 30.0% |
| GTCATGTGATTACATTCAAT+CGG | - | chr7_2:19520057-19520076 | Msa1051850:intron | 30.0% | |
| AACACTGCAATTTAATAGGA+AGG | + | chr7_2:19520390-19520409 | None:intergenic | 30.0% | |
| ! | GACAACATTGGTTAAAACTA+TGG | + | chr7_2:19520775-19520794 | None:intergenic | 30.0% |
| ! | AAAACTATTGTTATCGACTG+CGG | + | chr7_2:19520934-19520953 | None:intergenic | 30.0% |
| GAAATCATGGATAAATCCAA+AGG | - | chr7_2:19521002-19521021 | Msa1051850:intron | 30.0% | |
| ! | AGACCAAGATTTAAAACCTT+TGG | + | chr7_2:19521021-19521040 | None:intergenic | 30.0% |
| TGTTGTGATTCTTAGTATTG+CGG | - | chr7_2:19521041-19521060 | Msa1051850:intron | 30.0% | |
| CATTGCACAAAGCTATTAAT+TGG | + | chr7_2:19521189-19521208 | None:intergenic | 30.0% | |
| ! | TGAAGCACTTTGACTATAAT+AGG | + | chr7_2:19521347-19521366 | None:intergenic | 30.0% |
| ! | GTAGCACAATTTACCATTTT+TGG | + | chr7_2:19521426-19521445 | None:intergenic | 30.0% |
| GTAGCATCGTAAACAATAAA+AGG | + | chr7_2:19521527-19521546 | None:intergenic | 30.0% | |
| ATTAACCAAAATTCATCTGC+GGG | + | chr7_2:19521558-19521577 | None:intergenic | 30.0% | |
| !!! | GCAGATGAATTTTGGTTAAT+TGG | - | chr7_2:19521558-19521577 | Msa1051850:intron | 30.0% |
| ! | TTTGGGATTTCAATAATGCT+AGG | - | chr7_2:19521637-19521656 | Msa1051850:intron | 30.0% |
| ! | CGTGATTGTTCATTTAAGAT+TGG | - | chr7_2:19521736-19521755 | Msa1051850:intron | 30.0% |
| AGTCCTGAAATTGTAAATGT+TGG | - | chr7_2:19521775-19521794 | Msa1051850:intron | 30.0% | |
| GTCCTGAAATTGTAAATGTT+GGG | - | chr7_2:19521776-19521795 | Msa1051850:intron | 30.0% | |
| TACCCAACATTTACAATTTC+AGG | + | chr7_2:19521781-19521800 | None:intergenic | 30.0% | |
| TAAAGGAGTTGAGGAATTAA+AGG | + | chr7_2:19521889-19521908 | None:intergenic | 30.0% | |
| CAATTTAACCCTAAGATTGA+AGG | + | chr7_2:19522122-19522141 | None:intergenic | 30.0% | |
| CTTCAATCTTAGGGTTAAAT+TGG | - | chr7_2:19522120-19522139 | Msa1051850:intron | 30.0% | |
| CTACACACCATTTATTCATA+AGG | + | chr7_2:19522219-19522238 | None:intergenic | 30.0% | |
| ATGTATAAGTAGCACTTCTA+GGG | + | chr7_2:19522261-19522280 | None:intergenic | 30.0% | |
| TATGTATAAGTAGCACTTCT+AGG | + | chr7_2:19522262-19522281 | None:intergenic | 30.0% | |
| GTTGCTCATATTATTTGAGT+AGG | + | chr7_2:19522351-19522370 | None:intergenic | 30.0% | |
| AACCTTAAATCCTACCTTTA+TGG | + | chr7_2:19522444-19522463 | None:intergenic | 30.0% | |
| GTTGGTACCTATAAAAGTAA+AGG | + | chr7_2:19522527-19522546 | None:intergenic | 30.0% | |
| ! | TCAGAACATCAATTTTCAGT+TGG | - | chr7_2:19522720-19522739 | Msa1051850:CDS | 30.0% |
| !!! | GGAGATTTTGGTTTTGATAC+AGG | - | chr7_2:19519241-19519260 | Msa1051850:CDS | 35.0% |
| !!! | ATTGCCTGGGTATTTTGATA+AGG | - | chr7_2:19519514-19519533 | Msa1051850:intron | 35.0% |
| GATAGTAATAGGAAAGTGAG+TGG | - | chr7_2:19519674-19519693 | Msa1051850:intron | 35.0% | |
| !! | TTCTGATTTTGAGAAGGATG+AGG | - | chr7_2:19519712-19519731 | Msa1051850:intron | 35.0% |
| !! | TTTTGAGAAGGATGAGGTTT+TGG | - | chr7_2:19519718-19519737 | Msa1051850:intron | 35.0% |
| GAATGTAATCACATGACATG+TGG | + | chr7_2:19520054-19520073 | None:intergenic | 35.0% | |
| ACATGTTTGATGTTTGACGT+CGG | + | chr7_2:19520140-19520159 | None:intergenic | 35.0% | |
| TTGAATAATCACAGGTTTCG+AGG | - | chr7_2:19520188-19520207 | Msa1051850:intron | 35.0% | |
| ! | TTCAATGTCACTAGCATTGA+TGG | - | chr7_2:19520409-19520428 | Msa1051850:intron | 35.0% |
| !!! | TGTTTTAAAGTTGGAGGGTT+TGG | - | chr7_2:19520473-19520492 | Msa1051850:intron | 35.0% |
| !!! | GTTTTAAAGTTGGAGGGTTT+GGG | - | chr7_2:19520474-19520493 | Msa1051850:intron | 35.0% |
| TGGCAGATATTTGACAACAT+TGG | + | chr7_2:19520787-19520806 | None:intergenic | 35.0% | |
| ATGTTGTCAAATATCTGCCA+TGG | - | chr7_2:19520787-19520806 | Msa1051850:intron | 35.0% | |
| CATCCTTCACAAATTGATCA+TGG | + | chr7_2:19520844-19520863 | None:intergenic | 35.0% | |
| CATGATCAATTTGTGAAGGA+TGG | - | chr7_2:19520842-19520861 | Msa1051850:intron | 35.0% | |
| TGAGTCATCATAAAACACCA+TGG | + | chr7_2:19520873-19520892 | None:intergenic | 35.0% | |
| GACTCATAATCGCAGATTTA+TGG | - | chr7_2:19520887-19520906 | Msa1051850:intron | 35.0% | |
| AATCGCAGTTGAATTTGATG+TGG | - | chr7_2:19521066-19521085 | Msa1051850:intron | 35.0% | |
| TGCACTAGTGTGTCAAAAAA+AGG | + | chr7_2:19521166-19521185 | None:intergenic | 35.0% | |
| TCATCTTGGTCAGATGAATA+GGG | + | chr7_2:19521301-19521320 | None:intergenic | 35.0% | |
| ATCATCTTGGTCAGATGAAT+AGG | + | chr7_2:19521302-19521321 | None:intergenic | 35.0% | |
| !! | CCATTTTTGGAGACAAAGAA+AGG | + | chr7_2:19521413-19521432 | None:intergenic | 35.0% |
| CCTTTCTTTGTCTCCAAAAA+TGG | - | chr7_2:19521410-19521429 | Msa1051850:intron | 35.0% | |
| !!! | AGGGTTTTAGCTTATTTGAG+AGG | + | chr7_2:19521456-19521475 | None:intergenic | 35.0% |
| AAAGCAAGCTGTCTCATAAA+GGG | + | chr7_2:19521475-19521494 | None:intergenic | 35.0% | |
| TGTAGAGTAGAATAAGCAAC+TGG | + | chr7_2:19521596-19521615 | None:intergenic | 35.0% | |
| AATAATGCTAGGACACACAT+AGG | - | chr7_2:19521648-19521667 | Msa1051850:intron | 35.0% | |
| TTAAATGAACAATCACGCCT+TGG | + | chr7_2:19521733-19521752 | None:intergenic | 35.0% | |
| TCATGATTCAAGTCATGAGA+AGG | + | chr7_2:19521865-19521884 | None:intergenic | 35.0% | |
| TTAAGGGATTAAAGGAGTTG+AGG | + | chr7_2:19521898-19521917 | None:intergenic | 35.0% | |
| ! | GGTTTGAGTTAAGGGATTAA+AGG | + | chr7_2:19521906-19521925 | None:intergenic | 35.0% |
| !! | GCTCAATTGGTTTGAGTTAA+GGG | + | chr7_2:19521914-19521933 | None:intergenic | 35.0% |
| !! | AGCTCAATTGGTTTGAGTTA+AGG | + | chr7_2:19521915-19521934 | None:intergenic | 35.0% |
| !! | TTTCGTTTCTGAAGTTGTCT+CGG | - | chr7_2:19522017-19522036 | Msa1051850:intron | 35.0% |
| TGTTAATCCGAGACAATTTC+AGG | + | chr7_2:19522061-19522080 | None:intergenic | 35.0% | |
| AGCCTAAATCCTTCAATCTT+AGG | - | chr7_2:19522110-19522129 | Msa1051850:intron | 35.0% | |
| GCCTAAATCCTTCAATCTTA+GGG | - | chr7_2:19522111-19522130 | Msa1051850:intron | 35.0% | |
| ACCCTAAGATTGAAGGATTT+AGG | + | chr7_2:19522115-19522134 | None:intergenic | 35.0% | |
| ! | TCTCCTTGTGACTTTTCTTT+AGG | - | chr7_2:19522310-19522329 | Msa1051850:CDS | 35.0% |
| ! | CTCCTTGTGACTTTTCTTTA+GGG | - | chr7_2:19522311-19522330 | Msa1051850:CDS | 35.0% |
| ! | TCCTTGTGACTTTTCTTTAG+GGG | - | chr7_2:19522312-19522331 | Msa1051850:CDS | 35.0% |
| ATTTGAGTAGGCTTAGATTG+TGG | + | chr7_2:19522339-19522358 | None:intergenic | 35.0% | |
| TGCCATAAAGGTAGGATTTA+AGG | - | chr7_2:19522439-19522458 | Msa1051850:CDS | 35.0% | |
| ! | AAAGGTAGGATTTAAGGTTC+TGG | - | chr7_2:19522445-19522464 | Msa1051850:CDS | 35.0% |
| GATGCTAAGTGAACAATTAG+AGG | - | chr7_2:19522696-19522715 | Msa1051850:CDS | 35.0% | |
| CAGTTCCATCATCGGAATTA+GGG | + | chr7_2:19519133-19519152 | None:intergenic | 40.0% | |
| ACAGTTCCATCATCGGAATT+AGG | + | chr7_2:19519134-19519153 | None:intergenic | 40.0% | |
| !! | TCCGATGATGGAACTGTTAA+CGG | - | chr7_2:19519137-19519156 | Msa1051850:CDS | 40.0% |
| ACCGTTAACAGTTCCATCAT+CGG | + | chr7_2:19519141-19519160 | None:intergenic | 40.0% | |
| GATGGAACTGTTAACGGTAA+CGG | - | chr7_2:19519143-19519162 | Msa1051850:CDS | 40.0% | |
| !! | GGTTGATGAGGAATGATTTG+AGG | - | chr7_2:19519480-19519499 | Msa1051850:intron | 40.0% |
| ACCTCCTTATCAAAATACCC+AGG | + | chr7_2:19519521-19519540 | None:intergenic | 40.0% | |
| TAATAGGAAAGTGAGTGGTG+AGG | - | chr7_2:19519679-19519698 | Msa1051850:intron | 40.0% | |
| ! | ATTAGGGTTAGTGTCGAATC+TGG | - | chr7_2:19520321-19520340 | Msa1051850:intron | 40.0% |
| ! | TTAGTGTCGAATCTGGTGTT+AGG | - | chr7_2:19520328-19520347 | Msa1051850:intron | 40.0% |
| TTGTCAAATATCTGCCATGG+CGG | - | chr7_2:19520790-19520809 | Msa1051850:intron | 40.0% | |
| CTGCCATGATCAATTTGTGA+AGG | - | chr7_2:19520838-19520857 | Msa1051850:intron | 40.0% | |
| AGATTTATGGCTTTCTGCCA+TGG | - | chr7_2:19520900-19520919 | Msa1051850:intron | 40.0% | |
| TGTTTGTTTGGACATGGCTT+AGG | - | chr7_2:19521274-19521293 | Msa1051850:intron | 40.0% | |
| TCTGACCAAGATGATGTGAT+AGG | - | chr7_2:19521307-19521326 | Msa1051850:CDS | 40.0% | |
| GAAAGCAAGCTGTCTCATAA+AGG | + | chr7_2:19521476-19521495 | None:intergenic | 40.0% | |
| ! | TTCTTCCCGCAGATGAATTT+TGG | - | chr7_2:19521550-19521569 | Msa1051850:intron | 40.0% |
| TCGCACAAAGGTTGTAAACA+GGG | + | chr7_2:19521687-19521706 | None:intergenic | 40.0% | |
| TTCGCACAAAGGTTGTAAAC+AGG | + | chr7_2:19521688-19521707 | None:intergenic | 40.0% | |
| TTTACAACCTTTGTGCGAAC+AGG | - | chr7_2:19521689-19521708 | Msa1051850:intron | 40.0% | |
| CTCTATAGGATACACATCCA+AGG | - | chr7_2:19521713-19521732 | Msa1051850:intron | 40.0% | |
| TTAGAGTTGAGGAGCTCAAT+TGG | + | chr7_2:19521927-19521946 | None:intergenic | 40.0% | |
| ACCCCTAAAGAAAAGTCACA+AGG | + | chr7_2:19522316-19522335 | None:intergenic | 40.0% | |
| GATAAGCTTGCAAATGCTCT+TGG | - | chr7_2:19522790-19522809 | Msa1051850:CDS | 40.0% | |
| CCATCATCGGAATTAGGGTT+TGG | + | chr7_2:19519128-19519147 | None:intergenic | 45.0% | |
| CCAAACCCTAATTCCGATGA+TGG | - | chr7_2:19519125-19519144 | Msa1051850:CDS | 45.0% | |
| !! | TTGGACTAGGCAGGAGATTT+TGG | - | chr7_2:19519229-19519248 | Msa1051850:CDS | 45.0% |
| GAAAGAGTGATGCTGAAAGC+CGG | - | chr7_2:19519264-19519283 | Msa1051850:CDS | 45.0% | |
| ! | TTGGTTCGAGTGAACCGAAA+TGG | - | chr7_2:19519315-19519334 | Msa1051850:CDS | 45.0% |
| TGGTTCGAGTGAACCGAAAT+GGG | - | chr7_2:19519316-19519335 | Msa1051850:CDS | 45.0% | |
| GAAGAAACCAACGCCCATTT+CGG | + | chr7_2:19519332-19519351 | None:intergenic | 45.0% | |
| GTAAGAAACACGGTGTGAAC+CGG | - | chr7_2:19519357-19519376 | Msa1051850:CDS | 45.0% | |
| TAAGAAACACGGTGTGAACC+GGG | - | chr7_2:19519358-19519377 | Msa1051850:CDS | 45.0% | |
| TCTTCTTATAATCTCCGGCG+AGG | + | chr7_2:19519415-19519434 | None:intergenic | 45.0% | |
| GAGTCAGGTGAGAGATGAAA+CGG | - | chr7_2:19519448-19519467 | Msa1051850:intron | 45.0% | |
| ! | GAGATGAAACGGAGTCGTTT+TGG | - | chr7_2:19519459-19519478 | Msa1051850:intron | 45.0% |
| GGAATGATTTGAGGAGAGAG+AGG | - | chr7_2:19519489-19519508 | Msa1051850:intron | 45.0% | |
| !!! | GCCTGGGTATTTTGATAAGG+AGG | - | chr7_2:19519517-19519536 | Msa1051850:intron | 45.0% |
| TGTTGTTCCGGTGAATGTGT+CGG | - | chr7_2:19519604-19519623 | Msa1051850:intron | 45.0% | |
| !! | TGAGAAGGATGAGGTTTTGG+TGG | - | chr7_2:19519721-19519740 | Msa1051850:intron | 45.0% |
| CTTGAGCATTTCCTTCTCCT+TGG | + | chr7_2:19520618-19520637 | None:intergenic | 45.0% | |
| CAAGGAGAAGGAAATGCTCA+AGG | - | chr7_2:19520616-19520635 | Msa1051850:intron | 45.0% | |
| ! | CTATTGTTATCGACTGCGGA+TGG | + | chr7_2:19520930-19520949 | None:intergenic | 45.0% |
| ! | AGCTTTGTGCAATGTTACCG+TGG | - | chr7_2:19521195-19521214 | Msa1051850:intron | 45.0% |
| CGCACAAAGGTTGTAAACAG+GGG | + | chr7_2:19521686-19521705 | None:intergenic | 45.0% | |
| ATAGAGTCCTGTTCGCACAA+AGG | + | chr7_2:19521699-19521718 | None:intergenic | 45.0% | |
| TTGTGCGAACAGGACTCTAT+AGG | - | chr7_2:19521699-19521718 | Msa1051850:intron | 45.0% | |
| CGTGGATCCTGAAATTGTCT+CGG | - | chr7_2:19522051-19522070 | Msa1051850:intron | 45.0% | |
| !! | GGCTGGTTGTTTCTCATTGT+TGG | + | chr7_2:19522545-19522564 | None:intergenic | 45.0% |
| ! | AAACGGGCTCTACATCTCAA+GGG | - | chr7_2:19522575-19522594 | Msa1051850:CDS | 45.0% |
| TTGCAGTTTCATTCTGCTGC+TGG | + | chr7_2:19522750-19522769 | None:intergenic | 45.0% | |
| !! | AAAATATAAATTAATAATCA+AGG | + | chr7_2:19520548-19520567 | None:intergenic | 5.0% |
| !!! | ATATATATTTTTTTTATGTT+AGG | - | chr7_2:19521120-19521139 | Msa1051850:intron | 5.0% |
| !!! | TATATATTTTTTTTATGTTA+GGG | - | chr7_2:19521121-19521140 | Msa1051850:intron | 5.0% |
| TGGCGAGGATGGAAAACCAA+CGG | - | chr7_2:19519193-19519212 | Msa1051850:CDS | 50.0% | |
| ! | TGCTGAAAGCCGGTTCAAAC+CGG | - | chr7_2:19519274-19519293 | Msa1051850:CDS | 50.0% |
| AAGAAACACGGTGTGAACCG+GGG | - | chr7_2:19519359-19519378 | Msa1051850:CDS | 50.0% | |
| GTCCGATTCAGTGTAGGAAG+CGG | - | chr7_2:19519381-19519400 | Msa1051850:CDS | 50.0% | |
| CACCGCTTCCTACACTGAAT+CGG | + | chr7_2:19519386-19519405 | None:intergenic | 50.0% | |
| GATAAAGGAGTGGGAGAGTC+AGG | - | chr7_2:19519433-19519452 | Msa1051850:intron | 50.0% | |
| !!! | CGGAGTCGTTTTGGTTGATG+AGG | - | chr7_2:19519468-19519487 | Msa1051850:intron | 50.0% |
| AGGAGAGAGAGGAAATTGCC+TGG | - | chr7_2:19519500-19519519 | Msa1051850:intron | 50.0% | |
| GGAGAGAGAGGAAATTGCCT+GGG | - | chr7_2:19519501-19519520 | Msa1051850:intron | 50.0% | |
| ! | GATACTTGATTCGCCGTCGA+TGG | - | chr7_2:19519547-19519566 | Msa1051850:intron | 50.0% |
| !! | GAATGTGTCGGTGTCGGTTT+CGG | - | chr7_2:19519616-19519635 | Msa1051850:intron | 50.0% |
| AGGAAAGTGAGTGGTGAGGA+TGG | - | chr7_2:19519683-19519702 | Msa1051850:intron | 50.0% | |
| GGAAAGTGAGTGGTGAGGAT+GGG | - | chr7_2:19519684-19519703 | Msa1051850:intron | 50.0% | |
| GGTTCCTATCGTGTGTGTGA+TGG | - | chr7_2:19520000-19520019 | Msa1051850:intron | 50.0% | |
| TTGGAGGGTTTGGGAGACAA+TGG | - | chr7_2:19520483-19520502 | Msa1051850:intron | 50.0% | |
| !! | ATATCTGCCATGGCGGATTG+CGG | - | chr7_2:19520797-19520816 | Msa1051850:intron | 50.0% |
| CCTCAACTGCAATCGCATTG+CGG | - | chr7_2:19521089-19521108 | Msa1051850:intron | 50.0% | |
| TGGGGCCTATCACATCATCT+TGG | + | chr7_2:19521315-19521334 | None:intergenic | 50.0% | |
| GTCTCGGAAAGACAAATGCG+TGG | - | chr7_2:19522033-19522052 | Msa1051850:intron | 50.0% | |
| ACCAGCCTCGAATCCAGAAA+CGG | - | chr7_2:19522558-19522577 | Msa1051850:CDS | 50.0% | |
| TGAGATGTAGAGCCCGTTTC+TGG | + | chr7_2:19522574-19522593 | None:intergenic | 50.0% | |
| ! | GAAACGGGCTCTACATCTCA+AGG | - | chr7_2:19522574-19522593 | Msa1051850:CDS | 50.0% |
| ! | AACGGGCTCTACATCTCAAG+GGG | - | chr7_2:19522576-19522595 | Msa1051850:CDS | 50.0% |
| CATCTCAAGGGGAACGTAAG+AGG | - | chr7_2:19522587-19522606 | Msa1051850:CDS | 50.0% | |
| AAGGGGAACGTAAGAGGAAG+CGG | - | chr7_2:19522593-19522612 | Msa1051850:CDS | 50.0% | |
| CTCTTCATTGCCGTCTCCAT+TGG | + | chr7_2:19522626-19522645 | None:intergenic | 50.0% | |
| CAATGGAGACGGCAATGAAG+AGG | - | chr7_2:19522624-19522643 | Msa1051850:CDS | 50.0% | |
| AGGATGGAAAACCAACGGCG+AGG | - | chr7_2:19519198-19519217 | Msa1051850:CDS | 55.0% | |
| ATCTCCTGCCTAGTCCAACG+TGG | + | chr7_2:19519227-19519246 | None:intergenic | 55.0% | |
| ! | GCTGAAAGCCGGTTCAAACC+GGG | - | chr7_2:19519275-19519294 | Msa1051850:CDS | 55.0% |
| ! | AAAGCCGGTTCAAACCGGGT+CGG | - | chr7_2:19519279-19519298 | Msa1051850:CDS | 55.0% |
| ! | CATTCCGACCCGGTTTGAAC+CGG | + | chr7_2:19519286-19519305 | None:intergenic | 55.0% |
| GGTTCAAACCGGGTCGGAAT+GGG | - | chr7_2:19519285-19519304 | Msa1051850:CDS | 55.0% | |
| GAGTGAACCGAAATGGGCGT+TGG | - | chr7_2:19519322-19519341 | Msa1051850:CDS | 55.0% | |
| TCCTACACTGAATCGGACCC+CGG | + | chr7_2:19519379-19519398 | None:intergenic | 55.0% | |
| CGATTCAGTGTAGGAAGCGG+TGG | - | chr7_2:19519384-19519403 | Msa1051850:CDS | 55.0% | |
| ! | ACTTGATTCGCCGTCGATGG+CGG | - | chr7_2:19519550-19519569 | Msa1051850:intron | 55.0% |
| !! | GGCAGCATCGGTTGTTGTTC+CGG | - | chr7_2:19519592-19519611 | Msa1051850:intron | 55.0% |
| ! | TCCGGTGAATGTGTCGGTGT+CGG | - | chr7_2:19519610-19519629 | Msa1051850:intron | 55.0% |
| ACCGACACCGACACATTCAC+CGG | + | chr7_2:19519614-19519633 | None:intergenic | 55.0% | |
| GACGCCATCACACACACGAT+AGG | + | chr7_2:19520007-19520026 | None:intergenic | 55.0% | |
| CAGTTTCTACCACTCCTCCG+AGG | - | chr7_2:19520589-19520608 | Msa1051850:intron | 55.0% | |
| TTCCTTCTCCTTGGCAGCCT+CGG | + | chr7_2:19520609-19520628 | None:intergenic | 55.0% | |
| CCGCAATGCGATTGCAGTTG+AGG | + | chr7_2:19521092-19521111 | None:intergenic | 55.0% | |
| CCAGCCTCGAATCCAGAAAC+GGG | - | chr7_2:19522559-19522578 | Msa1051850:CDS | 55.0% | |
| ! | AGAGCCCGTTTCTGGATTCG+AGG | + | chr7_2:19522566-19522585 | None:intergenic | 55.0% |
| AGGAAGCGGTTCGCAACCAA+TGG | - | chr7_2:19522607-19522626 | Msa1051850:CDS | 55.0% | |
| CGGTTCGCAACCAATGGAGA+CGG | - | chr7_2:19522613-19522632 | Msa1051850:CDS | 55.0% | |
| TGGAGACGGCAATGAAGAGG+AGG | - | chr7_2:19522627-19522646 | Msa1051850:CDS | 55.0% | |
| TCCATCCTCGCCACCGTTCA+CGG | + | chr7_2:19519186-19519205 | None:intergenic | 60.0% | |
| CGGTTCAAACCGGGTCGGAA+TGG | - | chr7_2:19519284-19519303 | Msa1051850:CDS | 60.0% | |
| AAACCGGGTCGGAATGGGTC+TGG | - | chr7_2:19519290-19519309 | Msa1051850:CDS | 60.0% | |
| AACCGGGTCGGAATGGGTCT+GGG | - | chr7_2:19519291-19519310 | Msa1051850:CDS | 60.0% | |
| AACCCAGACCCATTCCGACC+CGG | + | chr7_2:19519296-19519315 | None:intergenic | 60.0% | |
| GGTCGGAATGGGTCTGGGTT+TGG | - | chr7_2:19519296-19519315 | Msa1051850:CDS | 60.0% | |
| ACCGGGGTCCGATTCAGTGT+AGG | - | chr7_2:19519375-19519394 | Msa1051850:CDS | 60.0% | |
| !! | GTCGGTGTCGGTTTCGGAGA+CGG | - | chr7_2:19519622-19519641 | Msa1051850:intron | 60.0% |
| !! | GTGTCGGTTTCGGAGACGGT+TGG | - | chr7_2:19519626-19519645 | Msa1051850:intron | 60.0% |
| TCGGTTTCGGAGACGGTTGG+AGG | - | chr7_2:19519629-19519648 | Msa1051850:intron | 60.0% | |
| CGGTTTCGGAGACGGTTGGA+GGG | - | chr7_2:19519630-19519649 | Msa1051850:intron | 60.0% | |
| GGTTTCGGAGACGGTTGGAG+GGG | - | chr7_2:19519631-19519650 | Msa1051850:intron | 60.0% | |
| ! | ACAGCTATTGGGGGCACGTG+TGG | - | chr7_2:19520099-19520118 | Msa1051850:intron | 60.0% |
| ! | CAGCTATTGGGGGCACGTGT+GGG | - | chr7_2:19520100-19520119 | Msa1051850:intron | 60.0% |
| TGTGAAGGATGGCAGCGCCA+TGG | - | chr7_2:19520853-19520872 | Msa1051850:intron | 60.0% | |
| ! | CCCGTTTCTGGATTCGAGGC+TGG | + | chr7_2:19522562-19522581 | None:intergenic | 60.0% |
| ATCCTCGCCACCGTTCACGG+CGG | + | chr7_2:19519183-19519202 | None:intergenic | 65.0% | |
| CGAGGCTGCCACGTTGGACT+AGG | - | chr7_2:19519216-19519235 | Msa1051850:CDS | 65.0% | |
| ! | GCTGCCACGTTGGACTAGGC+AGG | - | chr7_2:19519220-19519239 | Msa1051850:CDS | 65.0% |
| AAGCGGTGGAGCAACCTCGC+CGG | - | chr7_2:19519398-19519417 | Msa1051850:intron | 65.0% | |
| ! | TGATTCGCCGTCGATGGCGG+TGG | - | chr7_2:19519553-19519572 | Msa1051850:intron | 65.0% |
| GGCTGCAGCTGTGGCAGCAT+CGG | - | chr7_2:19519580-19519599 | Msa1051850:intron | 65.0% | |
| GGAGACGGTTGGAGGGGATG+AGG | - | chr7_2:19519637-19519656 | Msa1051850:intron | 65.0% | |
| GACGGTTGGAGGGGATGAGG+AGG | - | chr7_2:19519640-19519659 | Msa1051850:intron | 65.0% | |
| CTTCTCCTTGGCAGCCTCGG+AGG | + | chr7_2:19520606-19520625 | None:intergenic | 65.0% | |
| CTCCGAGGCTGCCAAGGAGA+AGG | - | chr7_2:19520604-19520623 | Msa1051850:intron | 65.0% | |
| !! | TCTGCCATGGCGGATTGCGG+TGG | - | chr7_2:19520800-19520819 | Msa1051850:intron | 65.0% |
| !! | CTGCCATGGCGGATTGCGGT+GGG | - | chr7_2:19520801-19520820 | Msa1051850:intron | 65.0% |
| TCTCCCACCGCAATCCGCCA+TGG | + | chr7_2:19520807-19520826 | None:intergenic | 65.0% | |
| CGACTGCGGATGGCAGACCA+TGG | + | chr7_2:19520920-19520939 | None:intergenic | 65.0% | |
| CCACCGTCCTCCGCCGTGAA+CGG | - | chr7_2:19519170-19519189 | Msa1051850:CDS | 70.0% | |
| CCACCGTTCACGGCGGAGGA+CGG | + | chr7_2:19519176-19519195 | None:intergenic | 70.0% | |
| GCCGTGAACGGTGGCGAGGA+TGG | - | chr7_2:19519182-19519201 | Msa1051850:CDS | 70.0% | |
| CAACGTGGCAGCCTCGCCGT+TGG | + | chr7_2:19519212-19519231 | None:intergenic | 70.0% | |
| CAACGGCGAGGCTGCCACGT+TGG | - | chr7_2:19519210-19519229 | Msa1051850:CDS | 70.0% | |
| CCTTGGCAGCCTCGGAGGAG+TGG | + | chr7_2:19520601-19520620 | None:intergenic | 70.0% | |
| CCACTCCTCCGAGGCTGCCA+AGG | - | chr7_2:19520598-19520617 | Msa1051850:intron | 70.0% | |
| CCGTTCACGGCGGAGGACGG+TGG | + | chr7_2:19519173-19519192 | None:intergenic | 75.0% | |
| CCGTCCTCCGCCGTGAACGG+TGG | - | chr7_2:19519173-19519192 | Msa1051850:CDS | 75.0% | |
| CTCGCCACCGTTCACGGCGG+AGG | + | chr7_2:19519180-19519199 | None:intergenic | 75.0% | |
| CTCCGCCGTGAACGGTGGCG+AGG | - | chr7_2:19519178-19519197 | Msa1051850:CDS | 75.0% | |
| ! | GCCGTCGATGGCGGTGGCAG+CGG | - | chr7_2:19519559-19519578 | Msa1051850:intron | 75.0% |
| GCCGCTGCCACCGCCATCGA+CGG | + | chr7_2:19519563-19519582 | None:intergenic | 75.0% | |
| GGTGGCAGCGGCTGCAGCTG+TGG | - | chr7_2:19519571-19519590 | Msa1051850:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 19519110 | 19522834 | 19519110 | ID=Msa1051850;Name=Msa1051850 |
| chr7_2 | mRNA | 19519110 | 19522834 | 19519110 | ID=Msa1051850-mRNA-1;Parent=Msa1051850;Name=Msa1051850-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|0.75|1|1|4|0|345 |
| chr7_2 | exon | 19522172 | 19522834 | 19522172 | ID=Msa1051850-mRNA-1:exon:4301;Parent=Msa1051850-mRNA-1 |
| chr7_2 | exon | 19521514 | 19521538 | 19521514 | ID=Msa1051850-mRNA-1:exon:4300;Parent=Msa1051850-mRNA-1 |
| chr7_2 | exon | 19521307 | 19521360 | 19521307 | ID=Msa1051850-mRNA-1:exon:4299;Parent=Msa1051850-mRNA-1 |
| chr7_2 | exon | 19519110 | 19519405 | 19519110 | ID=Msa1051850-mRNA-1:exon:4298;Parent=Msa1051850-mRNA-1 |
| chr7_2 | CDS | 19522172 | 19522834 | 19522172 | ID=Msa1051850-mRNA-1:cds;Parent=Msa1051850-mRNA-1 |
| chr7_2 | CDS | 19521514 | 19521538 | 19521514 | ID=Msa1051850-mRNA-1:cds;Parent=Msa1051850-mRNA-1 |
| chr7_2 | CDS | 19521307 | 19521360 | 19521307 | ID=Msa1051850-mRNA-1:cds;Parent=Msa1051850-mRNA-1 |
| chr7_2 | CDS | 19519110 | 19519405 | 19519110 | ID=Msa1051850-mRNA-1:cds;Parent=Msa1051850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
