AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0177320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0177320 MtrunA17_Chr1g0200341 99.634 547 2 0 1 547 1 547 0.0 1135
Msa0177320 MtrunA17_Chr1g0200341 98.625 291 2 1 540 830 267 555 0.0 602
Msa0177320 MtrunA17_Chr1g0200331 86.055 545 56 2 1 545 19 543 0.0 959
Msa0177320 MtrunA17_Chr1g0200331 89.347 291 29 1 540 830 265 553 0.0 542
Msa0177320 MtrunA17_Chr3g0145461 73.166 559 132 5 2 547 12 565 0.0 861
Msa0177320 MtrunA17_Chr3g0145461 78.694 291 58 3 540 829 286 573 1.39e-169 503
Msa0177320 MtrunA17_Chr4g0038561 70.200 500 143 4 47 545 9 503 0.0 738
Msa0177320 MtrunA17_Chr4g0038561 74.306 288 71 2 540 827 226 510 2.15e-159 474
Msa0177320 MtrunA17_Chr8g0383361 58.952 458 182 2 91 543 165 621 0.0 586
Msa0177320 MtrunA17_Chr8g0383361 58.065 279 114 2 540 818 346 621 6.02e-114 361
Msa0177320 MtrunA17_Chr7g0271621 59.062 469 186 4 79 543 153 619 0.0 576
Msa0177320 MtrunA17_Chr7g0271621 56.631 279 118 2 540 818 344 619 8.66e-110 350
Msa0177320 MtrunA17_Chr1g0192991 59.823 453 176 3 92 540 114 564 0.0 573
Msa0177320 MtrunA17_Chr1g0192991 57.762 277 112 3 540 815 292 564 1.58e-111 353
Msa0177320 MtrunA17_Chr4g0068901 53.714 525 226 6 34 543 118 640 0.0 571
Msa0177320 MtrunA17_Chr4g0068901 56.429 280 117 3 540 818 365 640 7.60e-109 348
Msa0177320 MtrunA17_Chr3g0082721 58.084 167 67 2 281 446 2 166 4.69e-63 209
Msa0177320 MtrunA17_Chr3g0082721 58.084 167 67 2 556 721 2 166 4.69e-63 209
Msa0177320 MtrunA17_Chr3g0086781 60.345 58 23 0 141 198 1 58 3.06e-14 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0177320 AT4G09510.1 83.273 550 86 4 2 547 3 550 0.0 952
Msa0177320 AT4G09510.1 87.629 291 33 2 540 830 271 558 0.0 543
Msa0177320 AT1G35580.2 82.482 548 89 4 1 547 1 542 0.0 947
Msa0177320 AT1G35580.2 85.813 289 38 2 540 828 263 548 1.10e-179 528
Msa0177320 AT1G35580.1 82.482 548 89 4 1 547 1 542 0.0 947
Msa0177320 AT1G35580.1 85.813 289 38 2 540 828 263 548 1.10e-179 528
Msa0177320 AT1G22650.1 82.528 538 80 5 10 547 4 527 0.0 929
Msa0177320 AT1G22650.1 89.655 290 27 2 540 829 248 534 0.0 550
Msa0177320 AT4G34860.2 77.798 554 102 6 6 545 15 561 0.0 889
Msa0177320 AT4G34860.2 85.567 291 39 2 540 830 284 571 0.0 536
Msa0177320 AT4G34860.1 77.798 554 102 6 6 545 15 561 0.0 889
Msa0177320 AT4G34860.1 85.567 291 39 2 540 830 284 571 0.0 536
Msa0177320 AT4G34860.3 77.798 554 102 6 6 545 15 561 0.0 889
Msa0177320 AT4G34860.3 85.567 291 39 2 540 830 284 571 0.0 536
Msa0177320 AT1G72000.1 82.618 489 83 2 58 545 3 490 0.0 860
Msa0177320 AT1G72000.1 86.552 290 36 2 540 829 213 499 0.0 539
Msa0177320 AT4G09510.2 82.391 460 75 4 2 457 3 460 0.0 789
Msa0177320 AT4G09510.2 86.528 193 23 2 540 732 271 460 2.39e-116 361
Msa0177320 AT1G35580.3 81.562 461 78 4 1 460 1 455 0.0 787
Msa0177320 AT1G35580.3 84.184 196 28 2 540 735 263 455 6.37e-114 355
Msa0177320 AT1G22650.2 81.473 448 69 5 10 457 4 437 0.0 763
Msa0177320 AT1G22650.2 89.637 193 17 2 540 732 248 437 3.75e-119 369
Msa0177320 AT5G22510.2 59.477 459 180 2 91 544 134 591 0.0 586
Msa0177320 AT5G22510.2 58.929 280 112 2 540 819 315 591 7.71e-115 362
Msa0177320 AT5G22510.1 59.477 459 180 2 91 544 134 591 0.0 586
Msa0177320 AT5G22510.1 58.929 280 112 2 540 819 315 591 7.71e-115 362
Msa0177320 AT1G56560.1 58.114 456 187 2 91 543 134 588 0.0 575
Msa0177320 AT1G56560.1 54.480 279 124 2 540 818 313 588 1.01e-109 349
Msa0177320 AT3G06500.1 59.041 459 180 3 91 543 182 638 0.0 565
Msa0177320 AT3G06500.1 57.143 280 115 3 540 818 363 638 4.60e-108 346
Msa0177320 AT3G05820.2 56.987 458 191 3 91 543 150 606 0.0 556
Msa0177320 AT3G05820.2 53.737 281 125 3 540 818 329 606 1.48e-104 336
Msa0177320 AT3G06500.2 58.376 394 156 3 156 543 48 439 4.09e-162 479
Msa0177320 AT3G06500.2 57.143 280 115 3 540 818 164 439 5.28e-110 345
Msa0177320 AT3G05820.1 57.341 361 148 3 91 446 150 509 3.18e-143 432
Msa0177320 AT3G05820.1 52.717 184 82 3 540 721 329 509 4.95e-60 213

Find 236 sgRNAs with CRISPR-Local

Find 515 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCCTTGCAGGGTGTTTA+TGG 0.100926 1_4:+64240809 Msa0177320:intron
TTCTCCTTGCAGGGTGTTTA+TGG 0.100926 1_4:+64243629 Msa0177320:intron
GATACTCTTATTGCAGATTT+TGG 0.135753 1_4:+64239945 Msa0177320:CDS
CTCCTGTTGACTCTGGATTC+TGG 0.209312 1_4:+64239991 Msa0177320:CDS
CGGTTCACCATTCATCAAAA+AGG 0.261228 1_4:-64239790 None:intergenic
TGATTAAAAGATCATCTTCT+TGG 0.264825 1_4:+64244818 Msa0177320:CDS
GGTGGGAAGGTTATATTTAT+AGG 0.278565 1_4:-64237498 None:intergenic
ATGGTCTATTGCGGGTTATT+TGG 0.279758 1_4:+64241900 Msa0177320:CDS
ATGGTCTATTGCGGGTTATT+TGG 0.279758 1_4:+64244720 Msa0177320:CDS
AGCAACTAAATGACATTTAT+CGG 0.283643 1_4:+64240993 Msa0177320:CDS
AGCAACTAAATGACATTTAT+CGG 0.283643 1_4:+64243813 Msa0177320:CDS
TGGATGGGCATATGGGAATT+AGG 0.284454 1_4:+64238173 Msa0177320:CDS
CACTCGTGACTTTCTATTGC+AGG 0.287232 1_4:-64241292 None:intergenic
CACTCGTGACTTTCTATTGC+AGG 0.287232 1_4:-64244112 None:intergenic
CACGAGTGGCGAATTGTTAC+TGG 0.296374 1_4:+64241307 Msa0177320:CDS
CACGAGTGGCGAATTGTTAC+TGG 0.296374 1_4:+64244127 Msa0177320:CDS
GTTAAAGACACTACATCTTC+AGG 0.309497 1_4:+64239833 Msa0177320:CDS
TAAATTGATTATCGGAGAAT+TGG 0.313025 1_4:+64238144 Msa0177320:five_prime_UTR
TTCACATGAGAAGCTACTTT+TGG 0.315196 1_4:+64240960 Msa0177320:CDS
TTCACATGAGAAGCTACTTT+TGG 0.315196 1_4:+64243780 Msa0177320:CDS
ATCCAATGGTTGCCGATGCC+TGG 0.318785 1_4:+64238428 Msa0177320:CDS
AGTTTACCATCGTAATATTC+AGG 0.320203 1_4:-64241838 None:intergenic
AGTTTACCATCGTAATATTC+AGG 0.320203 1_4:-64244658 None:intergenic
CCAACTCTGCTTTGTGCTGA+TGG 0.324554 1_4:+64240140 Msa0177320:CDS
AACCGTTCCATTCCTCCTTC+AGG 0.327319 1_4:+64237636 Msa0177320:five_prime_UTR
TGATAAAGTAAATTGATTAT+CGG 0.335473 1_4:+64238136 Msa0177320:five_prime_UTR
TCATCTGCTTGTCTTCTTCA+AGG 0.335576 1_4:-64241969 None:intergenic
TCATCTGCTTGTCTTCTTCA+AGG 0.335576 1_4:-64244789 None:intergenic
ATCTCACTCGTTTGCTTGAC+AGG 0.343739 1_4:+64238239 Msa0177320:CDS
GGAGAGAATGGATGGGCATA+TGG 0.343886 1_4:+64238165 Msa0177320:exon
AAATAAGTTTAATGTTATTC+CGG 0.344511 1_4:+64241048 Msa0177320:CDS
AAATAAGTTTAATGTTATTC+CGG 0.344511 1_4:+64243868 Msa0177320:CDS
CTGGCCAAGATCCTCCATTA+TGG 0.347238 1_4:-64241360 None:intergenic
CTGGCCAAGATCCTCCATTA+TGG 0.347238 1_4:-64244180 None:intergenic
ACACGTGGTGGCTACTTCAT+TGG 0.356280 1_4:+64241106 Msa0177320:CDS
ACACGTGGTGGCTACTTCAT+TGG 0.356280 1_4:+64243926 Msa0177320:CDS
CAACAGGTGCACCTCTAAAA+TGG 0.356755 1_4:-64238474 None:intergenic
GATAAATGTCATTTAGTTGC+TGG 0.364423 1_4:-64240991 None:intergenic
GATAAATGTCATTTAGTTGC+TGG 0.364423 1_4:-64243811 None:intergenic
TGGAAGATATGTTGGGAAAC+AGG 0.366576 1_4:+64241861 Msa0177320:CDS
TGGAAGATATGTTGGGAAAC+AGG 0.366576 1_4:+64244681 Msa0177320:CDS
GAATCTGATAGTTGTCAAAA+AGG 0.369286 1_4:+64240068 Msa0177320:CDS
TTACTTGATATAGCCGGTTA+TGG 0.370143 1_4:-64237453 None:intergenic
ATTGCACGTCTTGCTATTTG+TGG 0.381527 1_4:-64241778 None:intergenic
ATTGCACGTCTTGCTATTTG+TGG 0.381527 1_4:-64244598 None:intergenic
TACTCGCCTGGAGGAAGATC+TGG 0.392572 1_4:+64238361 Msa0177320:CDS
TAGGCAATACGACGCCGTTT+TGG 0.398645 1_4:-64237412 None:intergenic
AAAAGTGCTTGAATCTCAAT+AGG 0.404944 1_4:-64240836 None:intergenic
AAAAGTGCTTGAATCTCAAT+AGG 0.404944 1_4:-64243656 None:intergenic
ATATAGCCGGTTATGGTTAC+CGG 0.404999 1_4:-64237446 None:intergenic
AACCCGCAATAGACCATGTT+TGG 0.407039 1_4:-64241894 None:intergenic
AACCCGCAATAGACCATGTT+TGG 0.407039 1_4:-64244714 None:intergenic
GGTAAACTTGGAAGATATGT+TGG 0.414179 1_4:+64241853 Msa0177320:CDS
GGTAAACTTGGAAGATATGT+TGG 0.414179 1_4:+64244673 Msa0177320:CDS
TACCAAACATGGTCTATTGC+GGG 0.414605 1_4:+64241892 Msa0177320:CDS
TACCAAACATGGTCTATTGC+GGG 0.414605 1_4:+64244712 Msa0177320:CDS
TCCGGATTCAATTCCAGAAT+GGG 0.421691 1_4:+64241066 Msa0177320:CDS
TCCGGATTCAATTCCAGAAT+GGG 0.421691 1_4:+64243886 Msa0177320:CDS
GGATCTTATTGAAGCTCGTT+GGG 0.432163 1_4:+64241231 Msa0177320:CDS
GGATCTTATTGAAGCTCGTT+GGG 0.432163 1_4:+64244051 Msa0177320:CDS
TATCGGAGAATTGGAGAGAA+TGG 0.438380 1_4:+64238153 Msa0177320:exon
GAATATTACGATGGTAAACT+TGG 0.442361 1_4:+64241841 Msa0177320:CDS
GAATATTACGATGGTAAACT+TGG 0.442361 1_4:+64244661 Msa0177320:CDS
GAGTAGATAGGTTTAAACTT+GGG 0.443964 1_4:+64239868 Msa0177320:CDS
TCCATTATGGTAACTCCATC+TGG 0.444012 1_4:-64241347 None:intergenic
TCCATTATGGTAACTCCATC+TGG 0.444012 1_4:-64244167 None:intergenic
AGAGCAGTCAATGGCAATCA+TGG 0.446518 1_4:+64241210 Msa0177320:CDS
AGAGCAGTCAATGGCAATCA+TGG 0.446518 1_4:+64244030 Msa0177320:CDS
ATGATTGCCATTGACTGCTC+TGG 0.446728 1_4:-64241208 None:intergenic
ATGATTGCCATTGACTGCTC+TGG 0.446728 1_4:-64244028 None:intergenic
CATCTGCTTGTCTTCTTCAA+GGG 0.447224 1_4:-64241968 None:intergenic
CATCTGCTTGTCTTCTTCAA+GGG 0.447224 1_4:-64244788 None:intergenic
CTGGAGGACCCCTCACACTT+GGG 0.450103 1_4:+64241937 Msa0177320:CDS
CTGGAGGACCCCTCACACTT+GGG 0.450103 1_4:+64244757 Msa0177320:CDS
ATAAAGTCAAACACCCATTC+TGG 0.451613 1_4:-64241079 None:intergenic
ATAAAGTCAAACACCCATTC+TGG 0.451613 1_4:-64243899 None:intergenic
GTCTATTGCGGGTTATTTGG+TGG 0.452343 1_4:+64241903 Msa0177320:CDS
GTCTATTGCGGGTTATTTGG+TGG 0.452343 1_4:+64244723 Msa0177320:CDS
CGTGCTTACACAAAATCTAC+AGG 0.455584 1_4:+64240029 Msa0177320:CDS
TCCCTTAGTGAATTGTCTGT+TGG 0.467466 1_4:+64238304 Msa0177320:CDS
AGAGTTGCTCCTGTTGACTC+TGG 0.469270 1_4:+64239984 Msa0177320:CDS
ACCAGATGGAGTTACCATAA+TGG 0.469371 1_4:+64241346 Msa0177320:CDS
ACCAGATGGAGTTACCATAA+TGG 0.469371 1_4:+64244166 Msa0177320:CDS
AGAGTAGATAGGTTTAAACT+TGG 0.471746 1_4:+64239867 Msa0177320:CDS
GGTGGGAGAAAAGAGTAGAT+AGG 0.473013 1_4:+64239856 Msa0177320:CDS
CACCAGAATCCAGAGTCAAC+AGG 0.475876 1_4:-64239993 None:intergenic
TCTCGGGTGCAGTGCTCCTA+TGG 0.481775 1_4:+64241722 Msa0177320:intron
TCTCGGGTGCAGTGCTCCTA+TGG 0.481775 1_4:+64244542 Msa0177320:intron
ACTCCGCCGGTAACCATAAC+CGG 0.481931 1_4:+64237440 Msa0177320:five_prime_UTR
CGCCGGAAAAGGAGAGAGAA+TGG 0.483782 1_4:-64237559 None:intergenic
GCCGGCGAATTCGCCGGAAA+AGG 0.485227 1_4:-64237570 None:intergenic
AAGTCCTTCATGATGCCGTT+AGG 0.485437 1_4:+64239916 Msa0177320:CDS
TTCCGGATTCAATTCCAGAA+TGG 0.486144 1_4:+64241065 Msa0177320:CDS
TTCCGGATTCAATTCCAGAA+TGG 0.486144 1_4:+64243885 Msa0177320:CDS
AACTATGACAATTACTCGCC+TGG 0.487484 1_4:+64238349 Msa0177320:CDS
TGGATCTTATTGAAGCTCGT+TGG 0.487509 1_4:+64241230 Msa0177320:CDS
TGGATCTTATTGAAGCTCGT+TGG 0.487509 1_4:+64244050 Msa0177320:CDS
ACCCATTCTGGAATTGAATC+CGG 0.488781 1_4:-64241067 None:intergenic
ACCCATTCTGGAATTGAATC+CGG 0.488781 1_4:-64243887 None:intergenic
TTAAAGACACTACATCTTCA+GGG 0.492030 1_4:+64239834 Msa0177320:CDS
GCCGGAAAAGGAGAGAGAAT+GGG 0.493173 1_4:-64237558 None:intergenic
ACAGCTGCTTGCATCAAGAC+AGG 0.494728 1_4:+64241751 Msa0177320:CDS
ACAGCTGCTTGCATCAAGAC+AGG 0.494728 1_4:+64244571 Msa0177320:CDS
ACAGCTGCAATTGTGCCAAC+AGG 0.495160 1_4:-64238490 None:intergenic
TCCCAGGCATCGGCAACCAT+TGG 0.497056 1_4:-64238430 None:intergenic
CCATCAGCACAAAGCAGAGT+TGG 0.497910 1_4:-64240140 None:intergenic
GAGAGAATGGATGGGCATAT+GGG 0.498231 1_4:+64238166 Msa0177320:exon
GCTGGAGGACCCCTCACACT+TGG 0.498361 1_4:+64241936 Msa0177320:CDS
GCTGGAGGACCCCTCACACT+TGG 0.498361 1_4:+64244756 Msa0177320:CDS
AGTAGATAGGTTTAAACTTG+GGG 0.499014 1_4:+64239869 Msa0177320:CDS
TTGACTTTATGCTTGTCAGA+GGG 0.502470 1_4:+64240104 Msa0177320:CDS
TCCAATGGTTGCCGATGCCT+GGG 0.503195 1_4:+64238429 Msa0177320:CDS
GTAAACTTGGAAGATATGTT+GGG 0.505556 1_4:+64241854 Msa0177320:CDS
GTAAACTTGGAAGATATGTT+GGG 0.505556 1_4:+64244674 Msa0177320:CDS
CTCGTTTGCTTGACAGGCCG+AGG 0.505998 1_4:+64238245 Msa0177320:CDS
CTAAAACGACGGTGGTTGGC+CGG 0.506692 1_4:-64237588 None:intergenic
GGAGAATTGGAGAGAATGGA+TGG 0.508246 1_4:+64238157 Msa0177320:exon
GGGGTCCTCCAGCATCATCT+TGG 0.509985 1_4:-64241926 None:intergenic
GGGGTCCTCCAGCATCATCT+TGG 0.509985 1_4:-64244746 None:intergenic
TCAGTGTTCGATGGCTGAGA+TGG 0.510749 1_4:+64238207 Msa0177320:CDS
TCTGAGAGATTCCCAGGCAT+CGG 0.511999 1_4:-64238440 None:intergenic
CCGGCTAAAACGACGGTGGT+TGG 0.512156 1_4:-64237592 None:intergenic
GGAAGTTCTAAATTACGATC+AGG 0.512441 1_4:+64238528 Msa0177320:CDS
AAATGTCAGTCCGGCTCGAA+TGG 0.512449 1_4:+64241129 Msa0177320:CDS
AAATGTCAGTCCGGCTCGAA+TGG 0.512449 1_4:+64243949 Msa0177320:CDS
GTTACCATAATGGAGGATCT+TGG 0.514487 1_4:+64241356 Msa0177320:CDS
GTTACCATAATGGAGGATCT+TGG 0.514487 1_4:+64244176 Msa0177320:CDS
CAATCCTATTTCGAATATCT+CGG 0.514780 1_4:+64237356 None:intergenic
ATCCTTCAGTAAACGACTCT+CGG 0.516742 1_4:-64241809 None:intergenic
ATCCTTCAGTAAACGACTCT+CGG 0.516742 1_4:-64244629 None:intergenic
CTCGTTTGAGCCGCATCCAA+TGG 0.519347 1_4:+64238414 Msa0177320:CDS
TGAAGGACTTTGAAACTAGC+TGG 0.526537 1_4:-64239903 None:intergenic
CATAATGGAGGATCTTGGCC+AGG 0.526915 1_4:+64241361 Msa0177320:CDS
CATAATGGAGGATCTTGGCC+AGG 0.526915 1_4:+64244181 Msa0177320:CDS
TTAAAACCAGATCTTCCTCC+AGG 0.527021 1_4:-64238367 None:intergenic
AGCAGTATCTTGCTTGAGCA+TGG 0.533846 1_4:-64240885 None:intergenic
AGCAGTATCTTGCTTGAGCA+TGG 0.533846 1_4:-64243705 None:intergenic
TGAAGCTCGTTGGGATGAGT+TGG 0.534616 1_4:+64241240 Msa0177320:CDS
TGAAGCTCGTTGGGATGAGT+TGG 0.534616 1_4:+64244060 Msa0177320:CDS
GTTATATTTATAGGCGAAGA+CGG 0.536785 1_4:-64237489 None:intergenic
GAGTTGCGAGCAGATGAAGC+AGG 0.538724 1_4:-64238394 None:intergenic
TTTGGTGGCCAAGATGATGC+TGG 0.539521 1_4:+64241918 Msa0177320:CDS
TTTGGTGGCCAAGATGATGC+TGG 0.539521 1_4:+64244738 Msa0177320:CDS
CTTCATTGGAAATGTCAGTC+CGG 0.543913 1_4:+64241120 Msa0177320:CDS
CTTCATTGGAAATGTCAGTC+CGG 0.543913 1_4:+64243940 Msa0177320:CDS
TGTCTCTCTATGTTTAGCCT+CGG 0.549766 1_4:-64238262 None:intergenic
AACCAACAGACAATTCACTA+AGG 0.552273 1_4:-64238306 None:intergenic
GCAAGATACTGCTGACGGAA+AGG 0.557282 1_4:+64240895 Msa0177320:CDS
GCAAGATACTGCTGACGGAA+AGG 0.557282 1_4:+64243715 Msa0177320:CDS
GCATCGGCAACCATTGGATG+CGG 0.557385 1_4:-64238424 None:intergenic
AAGAGAACCTGAAGGAGGAA+TGG 0.558699 1_4:-64237643 None:intergenic
CTGTTGACTCTGGATTCTGG+TGG 0.560824 1_4:+64239994 Msa0177320:CDS
AGCAACTCCAGAGCAGTCAA+TGG 0.562784 1_4:+64241201 Msa0177320:CDS
AGCAACTCCAGAGCAGTCAA+TGG 0.562784 1_4:+64244021 Msa0177320:CDS
AGTCGGCTCTCAGTGTTCGA+TGG 0.565802 1_4:+64238198 Msa0177320:CDS
GGGAGAAAATAGTCGGGGAA+GGG 0.565881 1_4:-64237536 None:intergenic
GGGGAGAAAATAGTCGGGGA+AGG 0.566639 1_4:-64237537 None:intergenic
TATATACACCAAGACCAAAA+CGG 0.567511 1_4:+64237398 Msa0177320:five_prime_UTR
ATACCAAACATGGTCTATTG+CGG 0.570548 1_4:+64241891 Msa0177320:CDS
ATACCAAACATGGTCTATTG+CGG 0.570548 1_4:+64244711 Msa0177320:CDS
TGCCGAGAGTCGTTTACTGA+AGG 0.571524 1_4:+64241807 Msa0177320:CDS
TGCCGAGAGTCGTTTACTGA+AGG 0.571524 1_4:+64244627 Msa0177320:CDS
ATTGACTTTATGCTTGTCAG+AGG 0.572993 1_4:+64240103 Msa0177320:CDS
GAAATCATCCCCAAGTGTGA+GGG 0.573270 1_4:-64241946 None:intergenic
GAAATCATCCCCAAGTGTGA+GGG 0.573270 1_4:-64244766 None:intergenic
CCGGAAAAGGAGAGAGAATG+GGG 0.574833 1_4:-64237557 None:intergenic
GTCGTTTACTGAAGGATGGA+TGG 0.575163 1_4:+64241815 Msa0177320:CDS
GTCGTTTACTGAAGGATGGA+TGG 0.575163 1_4:+64244635 Msa0177320:CDS
GATAGGTTTAAACTTGGGGA+AGG 0.579136 1_4:+64239873 Msa0177320:CDS
CTGCATGATTGATAGAAGAA+TGG 0.580250 1_4:+64240166 Msa0177320:CDS
GACAGAGATCATTTGATGAG+AGG 0.581865 1_4:+64238281 Msa0177320:CDS
GACACTACATCTTCAGGGGT+GGG 0.583162 1_4:+64239839 Msa0177320:CDS
GACTTTATGCCAACACGTGG+TGG 0.583242 1_4:+64241094 Msa0177320:CDS
GACTTTATGCCAACACGTGG+TGG 0.583242 1_4:+64243914 Msa0177320:CDS
GATCTCTCCGGCTAAAACGA+CGG 0.584702 1_4:-64237599 None:intergenic
GAGAGTCGTTTACTGAAGGA+TGG 0.585747 1_4:+64241811 Msa0177320:CDS
GAGAGTCGTTTACTGAAGGA+TGG 0.585747 1_4:+64244631 Msa0177320:CDS
CATATGGGAATTAGGAAAGT+CGG 0.586182 1_4:+64238181 Msa0177320:CDS
AGTTGCGAGCAGATGAAGCA+GGG 0.592201 1_4:-64238393 None:intergenic
ACTCGTGACTTTCTATTGCA+GGG 0.593543 1_4:-64241291 None:intergenic
ACTCGTGACTTTCTATTGCA+GGG 0.593543 1_4:-64244111 None:intergenic
GCTCGTTGGGATGAGTTGGT+TGG 0.593613 1_4:+64241244 Msa0177320:CDS
GCTCGTTGGGATGAGTTGGT+TGG 0.593613 1_4:+64244064 Msa0177320:CDS
AAAATGAGAATGAGGTGGGA+AGG 0.598036 1_4:-64237511 None:intergenic
ACCAACAGACAATTCACTAA+GGG 0.600417 1_4:-64238305 None:intergenic
TGGAGGACCCCTCACACTTG+GGG 0.604221 1_4:+64241938 Msa0177320:CDS
TGGAGGACCCCTCACACTTG+GGG 0.604221 1_4:+64244758 Msa0177320:CDS
GGAGGAATGGAACGGTTCGT+CGG 0.604586 1_4:-64237630 None:intergenic
TGGTTGGCCGGCGAATTCGC+CGG 0.604675 1_4:-64237576 None:intergenic
CATCGAAAATCCATTCGAGC+CGG 0.607036 1_4:-64241139 None:intergenic
CATCGAAAATCCATTCGAGC+CGG 0.607036 1_4:-64243959 None:intergenic
GGAAATCATCCCCAAGTGTG+AGG 0.608698 1_4:-64241947 None:intergenic
GGAAATCATCCCCAAGTGTG+AGG 0.608698 1_4:-64244767 None:intergenic
TGACTTTATGCTTGTCAGAG+GGG 0.613950 1_4:+64240105 Msa0177320:CDS
GAGAATTGGAGAGAATGGAT+GGG 0.614047 1_4:+64238158 Msa0177320:exon
ATGAAGTAGCCACCACGTGT+TGG 0.617112 1_4:-64241103 None:intergenic
ATGAAGTAGCCACCACGTGT+TGG 0.617112 1_4:-64243923 None:intergenic
AGACACTACATCTTCAGGGG+TGG 0.617643 1_4:+64239838 Msa0177320:CDS
ATTGCCTACGTGGACTCCGC+CGG 0.618532 1_4:+64237427 Msa0177320:five_prime_UTR
CAGCTGCTTGCATCAAGACA+GGG 0.626845 1_4:+64241752 Msa0177320:CDS
CAGCTGCTTGCATCAAGACA+GGG 0.626845 1_4:+64244572 Msa0177320:CDS
AGGCAAGAAAATACCAAACA+TGG 0.630162 1_4:+64241881 Msa0177320:CDS
AGGCAAGAAAATACCAAACA+TGG 0.630162 1_4:+64244701 Msa0177320:CDS
CTCAAGCAAGATACTGCTGA+CGG 0.630483 1_4:+64240890 Msa0177320:CDS
CTCAAGCAAGATACTGCTGA+CGG 0.630483 1_4:+64243710 Msa0177320:CDS
ACGGCGTCGTATTGCCTACG+TGG 0.637107 1_4:+64237417 Msa0177320:five_prime_UTR
GTGCTTACACAAAATCTACA+GGG 0.638309 1_4:+64240030 Msa0177320:CDS
TAAAGACACTACATCTTCAG+GGG 0.641893 1_4:+64239835 Msa0177320:CDS
AAATCATCCCCAAGTGTGAG+GGG 0.644060 1_4:-64241945 None:intergenic
AAATCATCCCCAAGTGTGAG+GGG 0.644060 1_4:-64244765 None:intergenic
TCGGCGAAGTGAGATCTCTC+CGG 0.645925 1_4:-64237611 None:intergenic
AAGCAGCTGTTACAAGCCAT+AGG 0.647567 1_4:-64241738 None:intergenic
AAGCAGCTGTTACAAGCCAT+AGG 0.647567 1_4:-64244558 None:intergenic
AGATGGAGTTACCATAATGG+AGG 0.663691 1_4:+64241349 Msa0177320:CDS
AGATGGAGTTACCATAATGG+AGG 0.663691 1_4:+64244169 Msa0177320:CDS
AGCTGTTGATCATCAAGCAG+AGG 0.665755 1_4:+64238507 Msa0177320:CDS
GGATGGCCTGAATATTACGA+TGG 0.679721 1_4:+64241832 Msa0177320:CDS
GGATGGCCTGAATATTACGA+TGG 0.679721 1_4:+64244652 Msa0177320:CDS
TTTGACTTTATGCCAACACG+TGG 0.685176 1_4:+64241091 Msa0177320:CDS
TTTGACTTTATGCCAACACG+TGG 0.685176 1_4:+64243911 Msa0177320:CDS
AGAGAAAGAGAACCTGAAGG+AGG 0.687364 1_4:-64237648 None:intergenic
GTTGCGAGCAGATGAAGCAG+GGG 0.696052 1_4:-64238392 None:intergenic
CGGAAAAGGAGAGAGAATGG+GGG 0.704625 1_4:-64237556 None:intergenic
CTGCAATAGAAAGTCACGAG+TGG 0.705027 1_4:+64241293 Msa0177320:CDS
CTGCAATAGAAAGTCACGAG+TGG 0.705027 1_4:+64244113 Msa0177320:CDS
TGCTTACACAAAATCTACAG+GGG 0.706001 1_4:+64240031 Msa0177320:CDS
CATTTATCGGTACAAGACTG+AGG 0.710749 1_4:+64241006 Msa0177320:CDS
CATTTATCGGTACAAGACTG+AGG 0.710749 1_4:+64243826 Msa0177320:CDS
AACCTGAAGGAGGAATGGAA+CGG 0.713052 1_4:-64237638 None:intergenic
CTCTCCGGCTAAAACGACGG+TGG 0.715618 1_4:-64237596 None:intergenic
TAGCCGGTTATGGTTACCGG+CGG 0.717297 1_4:-64237443 None:intergenic
TATGACAATTACTCGCCTGG+AGG 0.730881 1_4:+64238352 Msa0177320:CDS
ATATTTATAGGCGAAGACGG+AGG 0.739481 1_4:-64237486 None:intergenic
GTTACCGGCGGAGTCCACGT+AGG 0.746301 1_4:-64237431 None:intergenic
GGTGGCCAAGATGATGCTGG+AGG 0.759245 1_4:+64241921 Msa0177320:CDS
GGTGGCCAAGATGATGCTGG+AGG 0.759245 1_4:+64244741 Msa0177320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTATTTGTTTAATCAAA+AGG + chr1_4:64238852-64238871 Msa0177320:intron 10.0%
!!! TTTCTTTATATACATAATTT+TGG + chr1_4:64242397-64242416 Msa0177320:intron 10.0%
!! AAGATAAAATAAAATAGAAA+AGG + chr1_4:64242745-64242764 Msa0177320:intron 10.0%
!!! TTTTTTTTTTGTGATCTATT+AGG + chr1_4:64237786-64237805 Msa0177320:intron 15.0%
!!! ATTTGTTTTTTTTGCTATTT+TGG + chr1_4:64238027-64238046 Msa0177320:intron 15.0%
!! TGATAAAGTAAATTGATTAT+CGG + chr1_4:64238136-64238155 Msa0177320:five_prime_UTR 15.0%
!! TAAAATTCAATATTCTGATT+TGG + chr1_4:64238570-64238589 Msa0177320:intron 15.0%
!! ATAATCAGTTTAAAAATTTC+AGG + chr1_4:64238781-64238800 Msa0177320:intron 15.0%
!!! ATGATAAATTTTTCTCTTTT+AGG + chr1_4:64239734-64239753 Msa0177320:intron 15.0%
!!! AAGAAATTTTTTACTATTTC+CGG - chr1_4:64239813-64239832 None:intergenic 15.0%
!! AAATAAGTTTAATGTTATTC+CGG + chr1_4:64241048-64241067 Msa0177320:CDS 15.0%
!! AACTTTAATATAGTTTATTG+TGG + chr1_4:64241464-64241483 Msa0177320:intron 15.0%
!! ACTTTAATATAGTTTATTGT+GGG + chr1_4:64241465-64241484 Msa0177320:intron 15.0%
!!! ACCAAAATTATTTTTTTTGA+GGG - chr1_4:64242430-64242449 None:intergenic 15.0%
!! AAATAAGTTTAATGTTATTC+CGG + chr1_4:64241048-64241067 Msa0177320:CDS 15.0%
!! AACTTTAATATAGTTTATTG+TGG + chr1_4:64241464-64241483 Msa0177320:intron 15.0%
!! ACTTTAATATAGTTTATTGT+GGG + chr1_4:64241465-64241484 Msa0177320:intron 15.0%
!!! ATTTTTTTACTTGATATAGC+CGG - chr1_4:64237462-64237481 None:intergenic 20.0%
!!! TATTAGGATATTGTTTTGTA+TGG + chr1_4:64237802-64237821 Msa0177320:intron 20.0%
!!! TTTGTTCGTTTTAAAAAGTT+TGG + chr1_4:64237872-64237891 Msa0177320:intron 20.0%
!! TATAATGTTTGTTTCAGATT+TGG + chr1_4:64238057-64238076 Msa0177320:intron 20.0%
!!! ATAATTTTACTCCATATACT+TGG + chr1_4:64238595-64238614 Msa0177320:intron 20.0%
!! ACAAATAAATAGATGAGATT+TGG - chr1_4:64238843-64238862 None:intergenic 20.0%
!! AAATATTTAGCTATCATTCT+GGG - chr1_4:64239000-64239019 None:intergenic 20.0%
!! AAAATATTTAGCTATCATTC+TGG - chr1_4:64239001-64239020 None:intergenic 20.0%
!!! ATTATTTTTACCTATCAATC+TGG - chr1_4:64239174-64239193 None:intergenic 20.0%
!! ATGAATCATTATAACAGTTA+TGG - chr1_4:64239556-64239575 None:intergenic 20.0%
!!! ATTTTCCAATTTATTGTTCA+AGG + chr1_4:64240293-64240312 Msa0177320:intron 20.0%
!!! GTTTTAATCTCTTTAATATG+TGG + chr1_4:64240710-64240729 Msa0177320:intron 20.0%
!! TATTCAAAGTTCATTTAACT+TGG + chr1_4:64241411-64241430 Msa0177320:intron 20.0%
!!! ATTCAAAGTTCATTTAACTT+GGG + chr1_4:64241412-64241431 Msa0177320:intron 20.0%
!! TTGAAATGTCTTTGATTATT+AGG - chr1_4:64242209-64242228 None:intergenic 20.0%
!!! TCCCTCAAAAAAAATAATTT+TGG + chr1_4:64242426-64242445 Msa0177320:intron 20.0%
!!! GACCAAAATTATTTTTTTTG+AGG - chr1_4:64242431-64242450 None:intergenic 20.0%
!! AAATGTCTTGATTAACAAAT+AGG - chr1_4:64242549-64242568 None:intergenic 20.0%
!!! ATTTTCCAATTTATTGTTCA+AGG + chr1_4:64240293-64240312 Msa0177320:intron 20.0%
!!! GTTTTAATCTCTTTAATATG+TGG + chr1_4:64240710-64240729 Msa0177320:intron 20.0%
!! TATTCAAAGTTCATTTAACT+TGG + chr1_4:64241411-64241430 Msa0177320:intron 20.0%
!!! ATTCAAAGTTCATTTAACTT+GGG + chr1_4:64241412-64241431 Msa0177320:intron 20.0%
! AACGAACAAAAATAACGAAA+TGG - chr1_4:64237862-64237881 None:intergenic 25.0%
! GTAGAGCTTAATCAATTATA+AGG + chr1_4:64237954-64237973 Msa0177320:intron 25.0%
! TAAATTGATTATCGGAGAAT+TGG + chr1_4:64238144-64238163 Msa0177320:five_prime_UTR 25.0%
! ATAACTCATATCCAAGTATA+TGG - chr1_4:64238609-64238628 None:intergenic 25.0%
! TTTGATATATGTGATATTGC+AGG - chr1_4:64238684-64238703 None:intergenic 25.0%
! TGCAATATCACATATATCAA+AGG + chr1_4:64238683-64238702 Msa0177320:intron 25.0%
! CCTAAAAAGAACAACATTAA+TGG - chr1_4:64238897-64238916 None:intergenic 25.0%
!! CCATTAATGTTGTTCTTTTT+AGG + chr1_4:64238894-64238913 Msa0177320:intron 25.0%
!! AGGAAAAGCATATAATTTAC+TGG + chr1_4:64238914-64238933 Msa0177320:intron 25.0%
! AATATTTAGCTATCATTCTG+GGG - chr1_4:64238999-64239018 None:intergenic 25.0%
!!! AAGAAAGAGATCATTTTTCT+TGG + chr1_4:64239211-64239230 Msa0177320:intron 25.0%
! TATCAATCCATAAGAATGAA+GGG - chr1_4:64239284-64239303 None:intergenic 25.0%
! CTGTGTAAAGGTAAAAAAAT+TGG - chr1_4:64239682-64239701 None:intergenic 25.0%
! TCCAAATAACTAGATAATGT+TGG - chr1_4:64240240-64240259 None:intergenic 25.0%
! ACATTATCTAGTTATTTGGA+TGG + chr1_4:64240240-64240259 Msa0177320:intron 25.0%
! CATAACCTTGAACAATAAAT+TGG - chr1_4:64240301-64240320 None:intergenic 25.0%
! TTCTTACTCTTATTCAACTA+TGG + chr1_4:64240352-64240371 Msa0177320:intron 25.0%
! TCTTACTCTTATTCAACTAT+GGG + chr1_4:64240353-64240372 Msa0177320:intron 25.0%
!! AACAATTTGTTTATCCAAAC+AGG - chr1_4:64240379-64240398 None:intergenic 25.0%
! GTTTGGATAAACAAATTGTT+TGG + chr1_4:64240379-64240398 Msa0177320:intron 25.0%
! ATGCTATAAGTTGTTCTTAT+AGG + chr1_4:64240477-64240496 Msa0177320:intron 25.0%
! CATTAGATGAATTTGACATA+TGG - chr1_4:64240638-64240657 None:intergenic 25.0%
! AGCAACTAAATGACATTTAT+CGG + chr1_4:64240993-64241012 Msa0177320:CDS 25.0%
!!! TTCAAAGTTCATTTAACTTG+GGG + chr1_4:64241413-64241432 Msa0177320:intron 25.0%
!!! ACTAAATACAGAGTCATTTT+TGG + chr1_4:64241495-64241514 Msa0177320:intron 25.0%
! GTAAGTATTATCAATCTGTT+TGG - chr1_4:64241526-64241545 None:intergenic 25.0%
! AAATCAGATTATCCATAGAA+AGG - chr1_4:64241604-64241623 None:intergenic 25.0%
! GAAAAGATTTGCAACATATT+TGG + chr1_4:64241653-64241672 Msa0177320:intron 25.0%
! ACAAAATGAAAAGTTAGAGA+AGG - chr1_4:64241695-64241714 None:intergenic 25.0%
!!! TTCATTTTGTTTAATGCTCT+CGG + chr1_4:64241705-64241724 Msa0177320:intron 25.0%
! TGATTAAAAGATCATCTTCT+TGG + chr1_4:64241998-64242017 Msa0177320:intron 25.0%
! AAGAATAGAGAAAACTTAGA+AGG + chr1_4:64242063-64242082 Msa0177320:intron 25.0%
! GGTTTCATGAAATAAAACTT+TGG + chr1_4:64242373-64242392 Msa0177320:intron 25.0%
! TTCACATTGCAAGAAAAAAA+AGG + chr1_4:64242456-64242475 Msa0177320:intron 25.0%
! TAATTCTTGGTTAGAATAAG+CGG - chr1_4:64242612-64242631 None:intergenic 25.0%
! GTTTACACGAGTTTAATTAT+GGG - chr1_4:64242647-64242666 None:intergenic 25.0%
! AGTTTACACGAGTTTAATTA+TGG - chr1_4:64242648-64242667 None:intergenic 25.0%
! TGTTTCCATTAGAAATAGAA+AGG + chr1_4:64242714-64242733 Msa0177320:intron 25.0%
!!! ACAATCCTTTCTATTTCTAA+TGG - chr1_4:64242722-64242741 None:intergenic 25.0%
!! TCAACTGAATAGTTCTATTT+CGG - chr1_4:64242798-64242817 None:intergenic 25.0%
! NNNNNNTTGGCATTTCAGTT+CGG - chr1_4:64242843-64242862 None:intergenic 25.0%
! TCCAAATAACTAGATAATGT+TGG - chr1_4:64240240-64240259 None:intergenic 25.0%
! ACATTATCTAGTTATTTGGA+TGG + chr1_4:64240240-64240259 Msa0177320:intron 25.0%
! CATAACCTTGAACAATAAAT+TGG - chr1_4:64240301-64240320 None:intergenic 25.0%
! TTCTTACTCTTATTCAACTA+TGG + chr1_4:64240352-64240371 Msa0177320:intron 25.0%
! TCTTACTCTTATTCAACTAT+GGG + chr1_4:64240353-64240372 Msa0177320:intron 25.0%
!! AACAATTTGTTTATCCAAAC+AGG - chr1_4:64240379-64240398 None:intergenic 25.0%
! GTTTGGATAAACAAATTGTT+TGG + chr1_4:64240379-64240398 Msa0177320:intron 25.0%
! ATGCTATAAGTTGTTCTTAT+AGG + chr1_4:64240477-64240496 Msa0177320:intron 25.0%
! CATTAGATGAATTTGACATA+TGG - chr1_4:64240638-64240657 None:intergenic 25.0%
! AGCAACTAAATGACATTTAT+CGG + chr1_4:64240993-64241012 Msa0177320:CDS 25.0%
!!! TTCAAAGTTCATTTAACTTG+GGG + chr1_4:64241413-64241432 Msa0177320:intron 25.0%
!!! ACTAAATACAGAGTCATTTT+TGG + chr1_4:64241495-64241514 Msa0177320:intron 25.0%
! GTAAGTATTATCAATCTGTT+TGG - chr1_4:64241526-64241545 None:intergenic 25.0%
! AAATCAGATTATCCATAGAA+AGG - chr1_4:64241604-64241623 None:intergenic 25.0%
! GAAAAGATTTGCAACATATT+TGG + chr1_4:64241653-64241672 Msa0177320:intron 25.0%
! ACAAAATGAAAAGTTAGAGA+AGG - chr1_4:64241695-64241714 None:intergenic 25.0%
!!! TTCATTTTGTTTAATGCTCT+CGG + chr1_4:64241705-64241724 Msa0177320:intron 25.0%
! TGATTAAAAGATCATCTTCT+TGG + chr1_4:64241998-64242017 Msa0177320:intron 25.0%
TATATACACCAAGACCAAAA+CGG + chr1_4:64237398-64237417 Msa0177320:five_prime_UTR 30.0%
GTTATATTTATAGGCGAAGA+CGG - chr1_4:64237492-64237511 None:intergenic 30.0%
ATACAGATCTAAGAATACGA+GGG - chr1_4:64237703-64237722 None:intergenic 30.0%
TATACAGATCTAAGAATACG+AGG - chr1_4:64237704-64237723 None:intergenic 30.0%
! AAATCTCTAGTCCATTTTAG+AGG + chr1_4:64238463-64238482 Msa0177320:CDS 30.0%
TCAAAGTTAACTTTGACATC+TGG - chr1_4:64238818-64238837 None:intergenic 30.0%
ATGGTTAAGTGAACAAAAAG+AGG - chr1_4:64238878-64238897 None:intergenic 30.0%
! AGAGATAGATAGCAATTTTC+GGG - chr1_4:64238955-64238974 None:intergenic 30.0%
! GAGAGATAGATAGCAATTTT+CGG - chr1_4:64238956-64238975 None:intergenic 30.0%
TAACACATAGGTTTCACATT+GGG - chr1_4:64239052-64239071 None:intergenic 30.0%
TAGATACTTGAGTAACACAT+AGG - chr1_4:64239064-64239083 None:intergenic 30.0%
! AAACCTGGTGTCAATATAAA+GGG + chr1_4:64239121-64239140 Msa0177320:intron 30.0%
TTAAATCCCCTTCATTCTTA+TGG + chr1_4:64239274-64239293 Msa0177320:intron 30.0%
ATCAATCCATAAGAATGAAG+GGG - chr1_4:64239283-64239302 None:intergenic 30.0%
CTATCAATCCATAAGAATGA+AGG - chr1_4:64239285-64239304 None:intergenic 30.0%
ATAGAATTGAAGATTGTAGC+TGG + chr1_4:64239301-64239320 Msa0177320:intron 30.0%
CTTTCCTTTAACAAACAACT+TGG + chr1_4:64239342-64239361 Msa0177320:intron 30.0%
ATCAATCCATAAATGTCAAG+AGG - chr1_4:64239368-64239387 None:intergenic 30.0%
ATAGAAATGAAGATTGTAGC+TGG + chr1_4:64239386-64239405 Msa0177320:intron 30.0%
CTTTCCTTTAACAAACAACT+TGG + chr1_4:64239342-64239361 Msa0177320:intron 30.0%
!! GTTATCTCTAAAATGTCAAG+AGG - chr1_4:64239453-64239472 None:intergenic 30.0%
TTAAAGACACTACATCTTCA+GGG + chr1_4:64239834-64239853 Msa0177320:CDS 30.0%
AGAGTAGATAGGTTTAAACT+TGG + chr1_4:64239867-64239886 Msa0177320:CDS 30.0%
GAGTAGATAGGTTTAAACTT+GGG + chr1_4:64239868-64239887 Msa0177320:CDS 30.0%
AGTAGATAGGTTTAAACTTG+GGG + chr1_4:64239869-64239888 Msa0177320:CDS 30.0%
!!! AAGAGTATCTGTTTTCCTAA+CGG - chr1_4:64239934-64239953 None:intergenic 30.0%
! GATACTCTTATTGCAGATTT+TGG + chr1_4:64239945-64239964 Msa0177320:CDS 30.0%
GAATCTGATAGTTGTCAAAA+AGG + chr1_4:64240068-64240087 Msa0177320:CDS 30.0%
TGATTGATAGAAGAATGGTA+AGG + chr1_4:64240171-64240190 Msa0177320:intron 30.0%
GCCAACATTATCTAGTTATT+TGG + chr1_4:64240236-64240255 Msa0177320:intron 30.0%
GTTGTTCTTATAGGCTATAT+TGG + chr1_4:64240486-64240505 Msa0177320:intron 30.0%
TAAGCTTTACGAGATTGTTT+AGG - chr1_4:64240577-64240596 None:intergenic 30.0%
GTCAAATTCATCTAATGATG+TGG + chr1_4:64240641-64240660 Msa0177320:intron 30.0%
TAATATGTGGTTTCAATTCG+AGG + chr1_4:64240723-64240742 Msa0177320:intron 30.0%
!! AAAAGTGCTTGAATCTCAAT+AGG - chr1_4:64240839-64240858 None:intergenic 30.0%
! GATAAATGTCATTTAGTTGC+TGG - chr1_4:64240994-64241013 None:intergenic 30.0%
! TAACTCCATCTGGTATTTTT+AGG - chr1_4:64241340-64241359 None:intergenic 30.0%
AAAAAGTTAAGGCATGAACT+CGG - chr1_4:64241567-64241586 None:intergenic 30.0%
ATTATCCATAGAAAGGATGA+GGG - chr1_4:64241597-64241616 None:intergenic 30.0%
GGATAATCTGATTTATACAG+TGG + chr1_4:64241610-64241629 Msa0177320:intron 30.0%
CTGATTTATACAGTGGTTAT+TGG + chr1_4:64241617-64241636 Msa0177320:intron 30.0%
!! TCATTTTGTTTAATGCTCTC+GGG + chr1_4:64241706-64241725 Msa0177320:intron 30.0%
AGTTTACCATCGTAATATTC+AGG - chr1_4:64241841-64241860 None:intergenic 30.0%
GAATATTACGATGGTAAACT+TGG + chr1_4:64241841-64241860 Msa0177320:CDS 30.0%
GTAAACTTGGAAGATATGTT+GGG + chr1_4:64241854-64241873 Msa0177320:CDS 30.0%
! GAAGATGATCTTTTAATCAC+TGG - chr1_4:64241997-64242016 None:intergenic 30.0%
!! TTGTTGTTTCTCTCAATACA+CGG + chr1_4:64242093-64242112 Msa0177320:intron 30.0%
TATAATCCCAAGCAACAAAT+GGG - chr1_4:64242266-64242285 None:intergenic 30.0%
TTATAATCCCAAGCAACAAA+TGG - chr1_4:64242267-64242286 None:intergenic 30.0%
TATAATCCCAAGCAACAAAT+GGG - chr1_4:64242266-64242285 None:intergenic 30.0%
TTATAATCCCAAGCAACAAA+TGG - chr1_4:64242267-64242286 None:intergenic 30.0%
CAAATAGGTGATAAGATGTA+AGG - chr1_4:64242534-64242553 None:intergenic 30.0%
TGTAAACTTTCAAATGAACG+TGG + chr1_4:64242660-64242679 Msa0177320:intron 30.0%
!! CTATTTCTAATGGAAACAGA+AGG - chr1_4:64242712-64242731 None:intergenic 30.0%
TGATTGATAGAAGAATGGTA+AGG + chr1_4:64240171-64240190 Msa0177320:intron 30.0%
GCCAACATTATCTAGTTATT+TGG + chr1_4:64240236-64240255 Msa0177320:intron 30.0%
GTTGTTCTTATAGGCTATAT+TGG + chr1_4:64240486-64240505 Msa0177320:intron 30.0%
TAAGCTTTACGAGATTGTTT+AGG - chr1_4:64240577-64240596 None:intergenic 30.0%
GTCAAATTCATCTAATGATG+TGG + chr1_4:64240641-64240660 Msa0177320:intron 30.0%
TAATATGTGGTTTCAATTCG+AGG + chr1_4:64240723-64240742 Msa0177320:intron 30.0%
!! AAAAGTGCTTGAATCTCAAT+AGG - chr1_4:64240839-64240858 None:intergenic 30.0%
! GATAAATGTCATTTAGTTGC+TGG - chr1_4:64240994-64241013 None:intergenic 30.0%
! TAACTCCATCTGGTATTTTT+AGG - chr1_4:64241340-64241359 None:intergenic 30.0%
AAAAAGTTAAGGCATGAACT+CGG - chr1_4:64241567-64241586 None:intergenic 30.0%
ATTATCCATAGAAAGGATGA+GGG - chr1_4:64241597-64241616 None:intergenic 30.0%
GGATAATCTGATTTATACAG+TGG + chr1_4:64241610-64241629 Msa0177320:intron 30.0%
CTGATTTATACAGTGGTTAT+TGG + chr1_4:64241617-64241636 Msa0177320:intron 30.0%
!! TCATTTTGTTTAATGCTCTC+GGG + chr1_4:64241706-64241725 Msa0177320:intron 30.0%
AGTTTACCATCGTAATATTC+AGG - chr1_4:64241841-64241860 None:intergenic 30.0%
GAATATTACGATGGTAAACT+TGG + chr1_4:64241841-64241860 Msa0177320:CDS 30.0%
GTAAACTTGGAAGATATGTT+GGG + chr1_4:64241854-64241873 Msa0177320:CDS 30.0%
! GAAGATGATCTTTTAATCAC+TGG - chr1_4:64241997-64242016 None:intergenic 30.0%
TTACTTGATATAGCCGGTTA+TGG - chr1_4:64237456-64237475 None:intergenic 35.0%
GGTGGGAAGGTTATATTTAT+AGG - chr1_4:64237501-64237520 None:intergenic 35.0%
GGAAAAAATGAGAATGAGGT+GGG - chr1_4:64237518-64237537 None:intergenic 35.0%
GAAGGGAAAAAATGAGAATG+AGG - chr1_4:64237522-64237541 None:intergenic 35.0%
ATAACGAAATGGCGCATTAA+AGG - chr1_4:64237851-64237870 None:intergenic 35.0%
CATATGGGAATTAGGAAAGT+CGG + chr1_4:64238181-64238200 Msa0177320:CDS 35.0%
ACCAACAGACAATTCACTAA+GGG - chr1_4:64238308-64238327 None:intergenic 35.0%
AACCAACAGACAATTCACTA+AGG - chr1_4:64238309-64238328 None:intergenic 35.0%
!!! AATTGTCTGTTGGTTTTGCA+AGG + chr1_4:64238314-64238333 Msa0177320:CDS 35.0%
!!! ATTGTCTGTTGGTTTTGCAA+GGG + chr1_4:64238315-64238334 Msa0177320:CDS 35.0%
!! GGAAGTTCTAAATTACGATC+AGG + chr1_4:64238528-64238547 Msa0177320:CDS 35.0%
! TTATCTCTGCAAGTTTTCAC+TGG + chr1_4:64238649-64238668 Msa0177320:intron 35.0%
TCTACAAGACATACAATCTG+TGG + chr1_4:64238717-64238736 Msa0177320:intron 35.0%
GTAACACATAGGTTTCACAT+TGG - chr1_4:64239053-64239072 None:intergenic 35.0%
! GTATTGTTTTCCTAGCAATC+TGG - chr1_4:64239100-64239119 None:intergenic 35.0%
TAGGAAAACAATACGAAACC+TGG + chr1_4:64239106-64239125 Msa0177320:intron 35.0%
! GAAACCTGGTGTCAATATAA+AGG + chr1_4:64239120-64239139 Msa0177320:intron 35.0%
TAACCCTTTATATTGACACC+AGG - chr1_4:64239127-64239146 None:intergenic 35.0%
TTACCTATCAATCTGGTAAC+AGG - chr1_4:64239167-64239186 None:intergenic 35.0%
TTGTAGCTGGATGTTTAATC+AGG + chr1_4:64239314-64239333 Msa0177320:intron 35.0%
TTGTAGCTGGATGTTTAATC+AGG + chr1_4:64239314-64239333 Msa0177320:intron 35.0%
! TTTTTACCTTTACACAGTCG+TGG + chr1_4:64239685-64239704 Msa0177320:intron 35.0%
! CTTTTTGATGAATGGTGAAC+CGG + chr1_4:64239791-64239810 Msa0177320:CDS 35.0%
GTTAAAGACACTACATCTTC+AGG + chr1_4:64239833-64239852 Msa0177320:CDS 35.0%
TAAAGACACTACATCTTCAG+GGG + chr1_4:64239835-64239854 Msa0177320:CDS 35.0%
GTGCTTACACAAAATCTACA+GGG + chr1_4:64240030-64240049 Msa0177320:CDS 35.0%
TGCTTACACAAAATCTACAG+GGG + chr1_4:64240031-64240050 Msa0177320:CDS 35.0%
! ATTGACTTTATGCTTGTCAG+AGG + chr1_4:64240103-64240122 Msa0177320:CDS 35.0%
TTGACTTTATGCTTGTCAGA+GGG + chr1_4:64240104-64240123 Msa0177320:CDS 35.0%
CTGCATGATTGATAGAAGAA+TGG + chr1_4:64240166-64240185 Msa0177320:CDS 35.0%
TCAAATAAGCCAATCCAAAC+AGG + chr1_4:64240612-64240631 Msa0177320:intron 35.0%
AATTTGACATATGGCCTGTT+TGG - chr1_4:64240629-64240648 None:intergenic 35.0%
! GATTCAAGCACTTTTCTTCA+TGG + chr1_4:64240844-64240863 Msa0177320:CDS 35.0%
!! TTCACATGAGAAGCTACTTT+TGG + chr1_4:64240960-64240979 Msa0177320:CDS 35.0%
ATAAAGTCAAACACCCATTC+TGG - chr1_4:64241082-64241101 None:intergenic 35.0%
!!! GATTTTCGATGGTTTGCTTT+AGG + chr1_4:64241151-64241170 Msa0177320:CDS 35.0%
!! GCAGGGTAACTAATTTTTAG+CGG - chr1_4:64241277-64241296 None:intergenic 35.0%
GTGATCCTAAAAATACCAGA+TGG + chr1_4:64241332-64241351 Msa0177320:CDS 35.0%
ACTAAGCATGATGAGAGAAA+GGG - chr1_4:64241391-64241410 None:intergenic 35.0%
AACTAAGCATGATGAGAGAA+AGG - chr1_4:64241392-64241411 None:intergenic 35.0%
AGGGGGAAAAGAAAAAGTTA+AGG - chr1_4:64241578-64241597 None:intergenic 35.0%
TTATCCATAGAAAGGATGAG+GGG - chr1_4:64241596-64241615 None:intergenic 35.0%
GATTATCCATAGAAAGGATG+AGG - chr1_4:64241598-64241617 None:intergenic 35.0%
GGTAAACTTGGAAGATATGT+TGG + chr1_4:64241853-64241872 Msa0177320:CDS 35.0%
AGGCAAGAAAATACCAAACA+TGG + chr1_4:64241881-64241900 Msa0177320:CDS 35.0%
ATACCAAACATGGTCTATTG+CGG + chr1_4:64241891-64241910 Msa0177320:CDS 35.0%
!! TCTTGGACTTGCTGAAATAT+TGG + chr1_4:64242015-64242034 Msa0177320:intron 35.0%
TTTGTGATTTCCTTCTTCGT+AGG + chr1_4:64242124-64242143 Msa0177320:intron 35.0%
GAGTGAATGTGCATAATTCT+TGG - chr1_4:64242625-64242644 None:intergenic 35.0%
! TGAATAGTTCTATTTCGGCA+GGG - chr1_4:64242793-64242812 None:intergenic 35.0%
GGTTAATCTGTTCGTTAATG+GGG - chr1_4:64242822-64242841 None:intergenic 35.0%
CGGTTAATCTGTTCGTTAAT+GGG - chr1_4:64242823-64242842 None:intergenic 35.0%
TCGGTTAATCTGTTCGTTAA+TGG - chr1_4:64242824-64242843 None:intergenic 35.0%
CTGCATGATTGATAGAAGAA+TGG + chr1_4:64240166-64240185 Msa0177320:CDS 35.0%
TCAAATAAGCCAATCCAAAC+AGG + chr1_4:64240612-64240631 Msa0177320:intron 35.0%
AATTTGACATATGGCCTGTT+TGG - chr1_4:64240629-64240648 None:intergenic 35.0%
! GATTCAAGCACTTTTCTTCA+TGG + chr1_4:64240844-64240863 Msa0177320:CDS 35.0%
!! TTCACATGAGAAGCTACTTT+TGG + chr1_4:64240960-64240979 Msa0177320:CDS 35.0%
ATAAAGTCAAACACCCATTC+TGG - chr1_4:64241082-64241101 None:intergenic 35.0%
!!! GATTTTCGATGGTTTGCTTT+AGG + chr1_4:64241151-64241170 Msa0177320:CDS 35.0%
!! GCAGGGTAACTAATTTTTAG+CGG - chr1_4:64241277-64241296 None:intergenic 35.0%
GTGATCCTAAAAATACCAGA+TGG + chr1_4:64241332-64241351 Msa0177320:CDS 35.0%
ACTAAGCATGATGAGAGAAA+GGG - chr1_4:64241391-64241410 None:intergenic 35.0%
AACTAAGCATGATGAGAGAA+AGG - chr1_4:64241392-64241411 None:intergenic 35.0%
AGGGGGAAAAGAAAAAGTTA+AGG - chr1_4:64241578-64241597 None:intergenic 35.0%
TTATCCATAGAAAGGATGAG+GGG - chr1_4:64241596-64241615 None:intergenic 35.0%
GATTATCCATAGAAAGGATG+AGG - chr1_4:64241598-64241617 None:intergenic 35.0%
GGTAAACTTGGAAGATATGT+TGG + chr1_4:64241853-64241872 Msa0177320:CDS 35.0%
AGGCAAGAAAATACCAAACA+TGG + chr1_4:64241881-64241900 Msa0177320:CDS 35.0%
ATACCAAACATGGTCTATTG+CGG + chr1_4:64241891-64241910 Msa0177320:CDS 35.0%
ATATAGCCGGTTATGGTTAC+CGG - chr1_4:64237449-64237468 None:intergenic 40.0%
ATATTTATAGGCGAAGACGG+AGG - chr1_4:64237489-64237508 None:intergenic 40.0%
AAAATGAGAATGAGGTGGGA+AGG - chr1_4:64237514-64237533 None:intergenic 40.0%
GGGAAAAAATGAGAATGAGG+TGG - chr1_4:64237519-64237538 None:intergenic 40.0%
AGAATGGGGGAGAAAATAGT+CGG - chr1_4:64237546-64237565 None:intergenic 40.0%
AGATCTAAGAATACGAGGGA+AGG - chr1_4:64237699-64237718 None:intergenic 40.0%
TTCAGATTTGGATTTGACGC+TGG + chr1_4:64238069-64238088 Msa0177320:intron 40.0%
TATCGGAGAATTGGAGAGAA+TGG + chr1_4:64238153-64238172 Msa0177320:exon 40.0%
GAGAATTGGAGAGAATGGAT+GGG + chr1_4:64238158-64238177 Msa0177320:exon 40.0%
TGTCTCTCTATGTTTAGCCT+CGG - chr1_4:64238265-64238284 None:intergenic 40.0%
GACAGAGATCATTTGATGAG+AGG + chr1_4:64238281-64238300 Msa0177320:CDS 40.0%
TCCCTTAGTGAATTGTCTGT+TGG + chr1_4:64238304-64238323 Msa0177320:CDS 40.0%
AACTATGACAATTACTCGCC+TGG + chr1_4:64238349-64238368 Msa0177320:CDS 40.0%
TTAAAACCAGATCTTCCTCC+AGG - chr1_4:64238370-64238389 None:intergenic 40.0%
!! AGATTTTCTGAGAGATTCCC+AGG - chr1_4:64238449-64238468 None:intergenic 40.0%
TGTGATATTGCAGGTTCATG+TGG - chr1_4:64238675-64238694 None:intergenic 40.0%
! ACTTTGACATCTGGTGTCAA+CGG - chr1_4:64238809-64238828 None:intergenic 40.0%
! ATTTAGCTATCATTCTGGGG+AGG - chr1_4:64238996-64239015 None:intergenic 40.0%
ATGCCTGTTACCAGATTGAT+AGG + chr1_4:64239161-64239180 Msa0177320:intron 40.0%
! GAGGCCAAGTTGTTTGTTAA+AGG - chr1_4:64239349-64239368 None:intergenic 40.0%
ACTTGGCCTCTTGACATTTA+TGG + chr1_4:64239359-64239378 Msa0177320:intron 40.0%
! GAGGCCAAGTTGTTTGTTAA+AGG - chr1_4:64239349-64239368 None:intergenic 40.0%
AACCCTGCAAAGAACAAAAC+AGG + chr1_4:64239496-64239515 Msa0177320:intron 40.0%
!! TGCCTGTTTTGTTCTTTGCA+GGG - chr1_4:64239501-64239520 None:intergenic 40.0%
!! TTGCCTGTTTTGTTCTTTGC+AGG - chr1_4:64239502-64239521 None:intergenic 40.0%
AATTGGTCCACTGTACTTTG+TGG - chr1_4:64239665-64239684 None:intergenic 40.0%
! TCAAAAAGGCTAGAGCACTT+GGG - chr1_4:64239779-64239798 None:intergenic 40.0%
! ATCAAAAAGGCTAGAGCACT+TGG - chr1_4:64239780-64239799 None:intergenic 40.0%
!! GCTCTAGCCTTTTTGATGAA+TGG + chr1_4:64239783-64239802 Msa0177320:CDS 40.0%
CGGTTCACCATTCATCAAAA+AGG - chr1_4:64239793-64239812 None:intergenic 40.0%
GATAGGTTTAAACTTGGGGA+AGG + chr1_4:64239873-64239892 Msa0177320:CDS 40.0%
!! TGAAGGACTTTGAAACTAGC+TGG - chr1_4:64239906-64239925 None:intergenic 40.0%
! TTTTCCTAACGGCATCATGA+AGG - chr1_4:64239923-64239942 None:intergenic 40.0%
!! GATTTTGGCGAAAGTGCAAT+CGG + chr1_4:64239960-64239979 Msa0177320:CDS 40.0%
CGTGCTTACACAAAATCTAC+AGG + chr1_4:64240029-64240048 Msa0177320:CDS 40.0%
TGACTTTATGCTTGTCAGAG+GGG + chr1_4:64240105-64240124 Msa0177320:CDS 40.0%
TATTCAACTATGGGCCTGTT+TGG + chr1_4:64240362-64240381 Msa0177320:intron 40.0%
GCACAAGTGCTTATCATGTT+TGG + chr1_4:64240410-64240429 Msa0177320:intron 40.0%
GCTTATTTGAGCTTCTCTAC+TGG - chr1_4:64240602-64240621 None:intergenic 40.0%
! CCGAAATACGAGTTGAACTT+CGG - chr1_4:64240751-64240770 None:intergenic 40.0%
CCGAAGTTCAACTCGTATTT+CGG + chr1_4:64240748-64240767 Msa0177320:intron 40.0%
ATTGTTTCCTTCTCCTTGCA+GGG + chr1_4:64240800-64240819 Msa0177320:intron 40.0%
ATATCCATAAACACCCTGCA+AGG - chr1_4:64240816-64240835 None:intergenic 40.0%
CATTTATCGGTACAAGACTG+AGG + chr1_4:64241006-64241025 Msa0177320:CDS 40.0%
TTCCGGATTCAATTCCAGAA+TGG + chr1_4:64241065-64241084 Msa0177320:CDS 40.0%
TCCGGATTCAATTCCAGAAT+GGG + chr1_4:64241066-64241085 Msa0177320:CDS 40.0%
!! ACCCATTCTGGAATTGAATC+CGG - chr1_4:64241070-64241089 None:intergenic 40.0%
! TTTGACTTTATGCCAACACG+TGG + chr1_4:64241091-64241110 Msa0177320:CDS 40.0%
CTTCATTGGAAATGTCAGTC+CGG + chr1_4:64241120-64241139 Msa0177320:CDS 40.0%
TGGATCTTATTGAAGCTCGT+TGG + chr1_4:64241230-64241249 Msa0177320:CDS 40.0%
GGATCTTATTGAAGCTCGTT+GGG + chr1_4:64241231-64241250 Msa0177320:CDS 40.0%
ACTCGTGACTTTCTATTGCA+GGG - chr1_4:64241294-64241313 None:intergenic 40.0%
ACCAGATGGAGTTACCATAA+TGG + chr1_4:64241346-64241365 Msa0177320:CDS 40.0%
TCCATTATGGTAACTCCATC+TGG - chr1_4:64241350-64241369 None:intergenic 40.0%
AGATGGAGTTACCATAATGG+AGG + chr1_4:64241349-64241368 Msa0177320:CDS 40.0%
! GTTACCATAATGGAGGATCT+TGG + chr1_4:64241356-64241375 Msa0177320:CDS 40.0%
TCGGATCAAAATCAGAGGTA+TGG - chr1_4:64241548-64241567 None:intergenic 40.0%
TGAACTCGGATCAAAATCAG+AGG - chr1_4:64241553-64241572 None:intergenic 40.0%
TATCCATAGAAAGGATGAGG+GGG - chr1_4:64241595-64241614 None:intergenic 40.0%
!! ATTGCACGTCTTGCTATTTG+TGG - chr1_4:64241781-64241800 None:intergenic 40.0%
ATCCTTCAGTAAACGACTCT+CGG - chr1_4:64241812-64241831 None:intergenic 40.0%
TGGAAGATATGTTGGGAAAC+AGG + chr1_4:64241861-64241880 Msa0177320:CDS 40.0%
TACCAAACATGGTCTATTGC+GGG + chr1_4:64241892-64241911 Msa0177320:CDS 40.0%
! ATGGTCTATTGCGGGTTATT+TGG + chr1_4:64241900-64241919 Msa0177320:CDS 40.0%
CATCTGCTTGTCTTCTTCAA+GGG - chr1_4:64241971-64241990 None:intergenic 40.0%
TCATCTGCTTGTCTTCTTCA+AGG - chr1_4:64241972-64241991 None:intergenic 40.0%
! GCCTGATTTGATTGGAAGTT+TGG + chr1_4:64242146-64242165 Msa0177320:intron 40.0%
GCCAAACTTCCAATCAAATC+AGG - chr1_4:64242150-64242169 None:intergenic 40.0%
TTGTGTAAAATAGCTGCTGC+TGG + chr1_4:64242170-64242189 Msa0177320:intron 40.0%
! TTACTCTCCCATTTGTTGCT+TGG + chr1_4:64242256-64242275 Msa0177320:intron 40.0%
! TACTCTCCCATTTGTTGCTT+GGG + chr1_4:64242257-64242276 Msa0177320:intron 40.0%
! AAACTCTCCCATTTGTTGCT+TGG + chr1_4:64242288-64242307 Msa0177320:intron 40.0%
! AACTCTCCCATTTGTTGCTT+GGG + chr1_4:64242289-64242308 Msa0177320:intron 40.0%
! GAATAGTTCTATTTCGGCAG+GGG - chr1_4:64242792-64242811 None:intergenic 40.0%
! CTGAATAGTTCTATTTCGGC+AGG - chr1_4:64242794-64242813 None:intergenic 40.0%
TATTCAACTATGGGCCTGTT+TGG + chr1_4:64240362-64240381 Msa0177320:intron 40.0%
GCACAAGTGCTTATCATGTT+TGG + chr1_4:64240410-64240429 Msa0177320:intron 40.0%
GCTTATTTGAGCTTCTCTAC+TGG - chr1_4:64240602-64240621 None:intergenic 40.0%
! CCGAAATACGAGTTGAACTT+CGG - chr1_4:64240751-64240770 None:intergenic 40.0%
CCGAAGTTCAACTCGTATTT+CGG + chr1_4:64240748-64240767 Msa0177320:intron 40.0%
ATTGTTTCCTTCTCCTTGCA+GGG + chr1_4:64240800-64240819 Msa0177320:intron 40.0%
ATATCCATAAACACCCTGCA+AGG - chr1_4:64240816-64240835 None:intergenic 40.0%
CATTTATCGGTACAAGACTG+AGG + chr1_4:64241006-64241025 Msa0177320:CDS 40.0%
TTCCGGATTCAATTCCAGAA+TGG + chr1_4:64241065-64241084 Msa0177320:CDS 40.0%
TCCGGATTCAATTCCAGAAT+GGG + chr1_4:64241066-64241085 Msa0177320:CDS 40.0%
!! ACCCATTCTGGAATTGAATC+CGG - chr1_4:64241070-64241089 None:intergenic 40.0%
! TTTGACTTTATGCCAACACG+TGG + chr1_4:64241091-64241110 Msa0177320:CDS 40.0%
CTTCATTGGAAATGTCAGTC+CGG + chr1_4:64241120-64241139 Msa0177320:CDS 40.0%
TGGATCTTATTGAAGCTCGT+TGG + chr1_4:64241230-64241249 Msa0177320:CDS 40.0%
GGATCTTATTGAAGCTCGTT+GGG + chr1_4:64241231-64241250 Msa0177320:CDS 40.0%
ACTCGTGACTTTCTATTGCA+GGG - chr1_4:64241294-64241313 None:intergenic 40.0%
ACCAGATGGAGTTACCATAA+TGG + chr1_4:64241346-64241365 Msa0177320:CDS 40.0%
TCCATTATGGTAACTCCATC+TGG - chr1_4:64241350-64241369 None:intergenic 40.0%
AGATGGAGTTACCATAATGG+AGG + chr1_4:64241349-64241368 Msa0177320:CDS 40.0%
! GTTACCATAATGGAGGATCT+TGG + chr1_4:64241356-64241375 Msa0177320:CDS 40.0%
TCGGATCAAAATCAGAGGTA+TGG - chr1_4:64241548-64241567 None:intergenic 40.0%
TGAACTCGGATCAAAATCAG+AGG - chr1_4:64241553-64241572 None:intergenic 40.0%
TATCCATAGAAAGGATGAGG+GGG - chr1_4:64241595-64241614 None:intergenic 40.0%
!! ATTGCACGTCTTGCTATTTG+TGG - chr1_4:64241781-64241800 None:intergenic 40.0%
ATCCTTCAGTAAACGACTCT+CGG - chr1_4:64241812-64241831 None:intergenic 40.0%
TGGAAGATATGTTGGGAAAC+AGG + chr1_4:64241861-64241880 Msa0177320:CDS 40.0%
TACCAAACATGGTCTATTGC+GGG + chr1_4:64241892-64241911 Msa0177320:CDS 40.0%
! ATGGTCTATTGCGGGTTATT+TGG + chr1_4:64241900-64241919 Msa0177320:CDS 40.0%
CATCTGCTTGTCTTCTTCAA+GGG - chr1_4:64241971-64241990 None:intergenic 40.0%
TCATCTGCTTGTCTTCTTCA+AGG - chr1_4:64241972-64241991 None:intergenic 40.0%
AATGGGGGAGAAAATAGTCG+GGG - chr1_4:64237544-64237563 None:intergenic 45.0%
GAATGGGGGAGAAAATAGTC+GGG - chr1_4:64237545-64237564 None:intergenic 45.0%
AACCTGAAGGAGGAATGGAA+CGG - chr1_4:64237641-64237660 None:intergenic 45.0%
AAGAGAACCTGAAGGAGGAA+TGG - chr1_4:64237646-64237665 None:intergenic 45.0%
AGAGAAAGAGAACCTGAAGG+AGG - chr1_4:64237651-64237670 None:intergenic 45.0%
GAGAGAGAAAGAGAACCTGA+AGG - chr1_4:64237654-64237673 None:intergenic 45.0%
ACGAGGGAAGGTAAATGATG+CGG - chr1_4:64237687-64237706 None:intergenic 45.0%
GGAGAATTGGAGAGAATGGA+TGG + chr1_4:64238157-64238176 Msa0177320:exon 45.0%
GAGAGAATGGATGGGCATAT+GGG + chr1_4:64238166-64238185 Msa0177320:exon 45.0%
TGGATGGGCATATGGGAATT+AGG + chr1_4:64238173-64238192 Msa0177320:CDS 45.0%
ATCTCACTCGTTTGCTTGAC+AGG + chr1_4:64238239-64238258 Msa0177320:CDS 45.0%
TATGACAATTACTCGCCTGG+AGG + chr1_4:64238352-64238371 Msa0177320:CDS 45.0%
! CAACAGGTGCACCTCTAAAA+TGG - chr1_4:64238477-64238496 None:intergenic 45.0%
!! CATTTTAGAGGTGCACCTGT+TGG + chr1_4:64238475-64238494 Msa0177320:CDS 45.0%
AGCTGTTGATCATCAAGCAG+AGG + chr1_4:64238507-64238526 Msa0177320:CDS 45.0%
CTTTACACAGTCGTGGACAT+CGG + chr1_4:64239692-64239711 Msa0177320:intron 45.0%
GGTGGGAGAAAAGAGTAGAT+AGG + chr1_4:64239856-64239875 Msa0177320:CDS 45.0%
AAGTCCTTCATGATGCCGTT+AGG + chr1_4:64239916-64239935 Msa0177320:CDS 45.0%
GACATATGGCCTGTTTGGAT+TGG - chr1_4:64240624-64240643 None:intergenic 45.0%
GATTGTTTCCTTCTCCTTGC+AGG + chr1_4:64240799-64240818 Msa0177320:intron 45.0%
ATAAACACCCTGCAAGGAGA+AGG - chr1_4:64240810-64240829 None:intergenic 45.0%
! TTCTCCTTGCAGGGTGTTTA+TGG + chr1_4:64240809-64240828 Msa0177320:intron 45.0%
AGCAGTATCTTGCTTGAGCA+TGG - chr1_4:64240888-64240907 None:intergenic 45.0%
CTCAAGCAAGATACTGCTGA+CGG + chr1_4:64240890-64240909 Msa0177320:CDS 45.0%
CATCGAAAATCCATTCGAGC+CGG - chr1_4:64241142-64241161 None:intergenic 45.0%
! ATGATTGCCATTGACTGCTC+TGG - chr1_4:64241211-64241230 None:intergenic 45.0%
AGAGCAGTCAATGGCAATCA+TGG + chr1_4:64241210-64241229 Msa0177320:CDS 45.0%
CACTCGTGACTTTCTATTGC+AGG - chr1_4:64241295-64241314 None:intergenic 45.0%
CTGCAATAGAAAGTCACGAG+TGG + chr1_4:64241293-64241312 Msa0177320:CDS 45.0%
GATGAGAGAAAGGGAAAACC+TGG - chr1_4:64241382-64241401 None:intergenic 45.0%
TTTCCCCCTCATCCTTTCTA+TGG + chr1_4:64241589-64241608 Msa0177320:intron 45.0%
AAGCAGCTGTTACAAGCCAT+AGG - chr1_4:64241741-64241760 None:intergenic 45.0%
GAGAGTCGTTTACTGAAGGA+TGG + chr1_4:64241811-64241830 Msa0177320:CDS 45.0%
GTCGTTTACTGAAGGATGGA+TGG + chr1_4:64241815-64241834 Msa0177320:CDS 45.0%
GGATGGCCTGAATATTACGA+TGG + chr1_4:64241832-64241851 Msa0177320:CDS 45.0%
AACCCGCAATAGACCATGTT+TGG - chr1_4:64241897-64241916 None:intergenic 45.0%
! GTCTATTGCGGGTTATTTGG+TGG + chr1_4:64241903-64241922 Msa0177320:CDS 45.0%
AAATCATCCCCAAGTGTGAG+GGG - chr1_4:64241948-64241967 None:intergenic 45.0%
GAAATCATCCCCAAGTGTGA+GGG - chr1_4:64241949-64241968 None:intergenic 45.0%
TCAAATCAGGCCTACGAAGA+AGG - chr1_4:64242137-64242156 None:intergenic 45.0%
! CTTCGTAGGCCTGATTTGAT+TGG + chr1_4:64242138-64242157 Msa0177320:intron 45.0%
GACATATGGCCTGTTTGGAT+TGG - chr1_4:64240624-64240643 None:intergenic 45.0%
GATTGTTTCCTTCTCCTTGC+AGG + chr1_4:64240799-64240818 Msa0177320:intron 45.0%
ATAAACACCCTGCAAGGAGA+AGG - chr1_4:64240810-64240829 None:intergenic 45.0%
! TTCTCCTTGCAGGGTGTTTA+TGG + chr1_4:64240809-64240828 Msa0177320:intron 45.0%
AGCAGTATCTTGCTTGAGCA+TGG - chr1_4:64240888-64240907 None:intergenic 45.0%
CTCAAGCAAGATACTGCTGA+CGG + chr1_4:64240890-64240909 Msa0177320:CDS 45.0%
CATCGAAAATCCATTCGAGC+CGG - chr1_4:64241142-64241161 None:intergenic 45.0%
! ATGATTGCCATTGACTGCTC+TGG - chr1_4:64241211-64241230 None:intergenic 45.0%
AGAGCAGTCAATGGCAATCA+TGG + chr1_4:64241210-64241229 Msa0177320:CDS 45.0%
CACTCGTGACTTTCTATTGC+AGG - chr1_4:64241295-64241314 None:intergenic 45.0%
CTGCAATAGAAAGTCACGAG+TGG + chr1_4:64241293-64241312 Msa0177320:CDS 45.0%
GATGAGAGAAAGGGAAAACC+TGG - chr1_4:64241382-64241401 None:intergenic 45.0%
TTTCCCCCTCATCCTTTCTA+TGG + chr1_4:64241589-64241608 Msa0177320:intron 45.0%
AAGCAGCTGTTACAAGCCAT+AGG - chr1_4:64241741-64241760 None:intergenic 45.0%
GAGAGTCGTTTACTGAAGGA+TGG + chr1_4:64241811-64241830 Msa0177320:CDS 45.0%
GTCGTTTACTGAAGGATGGA+TGG + chr1_4:64241815-64241834 Msa0177320:CDS 45.0%
GGATGGCCTGAATATTACGA+TGG + chr1_4:64241832-64241851 Msa0177320:CDS 45.0%
AACCCGCAATAGACCATGTT+TGG - chr1_4:64241897-64241916 None:intergenic 45.0%
! GTCTATTGCGGGTTATTTGG+TGG + chr1_4:64241903-64241922 Msa0177320:CDS 45.0%
AAATCATCCCCAAGTGTGAG+GGG - chr1_4:64241948-64241967 None:intergenic 45.0%
GAAATCATCCCCAAGTGTGA+GGG - chr1_4:64241949-64241968 None:intergenic 45.0%
!!! TTGAATTTTTTTTTTTTTTT+TGG + chr1_4:64238093-64238112 Msa0177320:intron 5.0%
!! ATACGACGCCGTTTTGGTCT+TGG - chr1_4:64237409-64237428 None:intergenic 50.0%
! TAGGCAATACGACGCCGTTT+TGG - chr1_4:64237415-64237434 None:intergenic 50.0%
GGGAGAAAATAGTCGGGGAA+GGG - chr1_4:64237539-64237558 None:intergenic 50.0%
CGGAAAAGGAGAGAGAATGG+GGG - chr1_4:64237559-64237578 None:intergenic 50.0%
CCGGAAAAGGAGAGAGAATG+GGG - chr1_4:64237560-64237579 None:intergenic 50.0%
! CCCCATTCTCTCTCCTTTTC+CGG + chr1_4:64237557-64237576 Msa0177320:five_prime_UTR 50.0%
GCCGGAAAAGGAGAGAGAAT+GGG - chr1_4:64237561-64237580 None:intergenic 50.0%
GATCTCTCCGGCTAAAACGA+CGG - chr1_4:64237602-64237621 None:intergenic 50.0%
AACCGTTCCATTCCTCCTTC+AGG + chr1_4:64237636-64237655 Msa0177320:five_prime_UTR 50.0%
AGGGAAGGTAAATGATGCGG+AGG - chr1_4:64237684-64237703 None:intergenic 50.0%
GGAGAGAATGGATGGGCATA+TGG + chr1_4:64238165-64238184 Msa0177320:exon 50.0%
TCAGTGTTCGATGGCTGAGA+TGG + chr1_4:64238207-64238226 Msa0177320:CDS 50.0%
!!! TCTGTTGGTTTTGCAAGGGC+TGG + chr1_4:64238319-64238338 Msa0177320:CDS 50.0%
!!! CTGTTGGTTTTGCAAGGGCT+GGG + chr1_4:64238320-64238339 Msa0177320:CDS 50.0%
AGTTGCGAGCAGATGAAGCA+GGG - chr1_4:64238396-64238415 None:intergenic 50.0%
TCTGAGAGATTCCCAGGCAT+CGG - chr1_4:64238443-64238462 None:intergenic 50.0%
ACAGCTGCAATTGTGCCAAC+AGG - chr1_4:64238493-64238512 None:intergenic 50.0%
! TAGCTATCATTCTGGGGAGG+TGG - chr1_4:64238993-64239012 None:intergenic 50.0%
GTGTGCGTTACCAGATTGCT+AGG + chr1_4:64239087-64239106 Msa0177320:intron 50.0%
GTTGCCTCCACAAAGTACAG+TGG + chr1_4:64239655-64239674 Msa0177320:intron 50.0%
TGGTCCACTGTACTTTGTGG+AGG - chr1_4:64239662-64239681 None:intergenic 50.0%
CGATGTCCACGACTGTGTAA+AGG - chr1_4:64239694-64239713 None:intergenic 50.0%
AGACACTACATCTTCAGGGG+TGG + chr1_4:64239838-64239857 Msa0177320:CDS 50.0%
GACACTACATCTTCAGGGGT+GGG + chr1_4:64239839-64239858 Msa0177320:CDS 50.0%
!! AGAGTTGCTCCTGTTGACTC+TGG + chr1_4:64239984-64240003 Msa0177320:CDS 50.0%
!! CTCCTGTTGACTCTGGATTC+TGG + chr1_4:64239991-64240010 Msa0177320:CDS 50.0%
CACCAGAATCCAGAGTCAAC+AGG - chr1_4:64239996-64240015 None:intergenic 50.0%
!! CTGTTGACTCTGGATTCTGG+TGG + chr1_4:64239994-64240013 Msa0177320:CDS 50.0%
CCATCAGCACAAAGCAGAGT+TGG - chr1_4:64240143-64240162 None:intergenic 50.0%
CCAACTCTGCTTTGTGCTGA+TGG + chr1_4:64240140-64240159 Msa0177320:CDS 50.0%
GCAAGATACTGCTGACGGAA+AGG + chr1_4:64240895-64240914 Msa0177320:CDS 50.0%
GACTTTATGCCAACACGTGG+TGG + chr1_4:64241094-64241113 Msa0177320:CDS 50.0%
ATGAAGTAGCCACCACGTGT+TGG - chr1_4:64241106-64241125 None:intergenic 50.0%
ACACGTGGTGGCTACTTCAT+TGG + chr1_4:64241106-64241125 Msa0177320:CDS 50.0%
! AAATGTCAGTCCGGCTCGAA+TGG + chr1_4:64241129-64241148 Msa0177320:CDS 50.0%
!! CGGCTCGAATGGATTTTCGA+TGG + chr1_4:64241140-64241159 Msa0177320:CDS 50.0%
AGCAACTCCAGAGCAGTCAA+TGG + chr1_4:64241201-64241220 Msa0177320:CDS 50.0%
TGAAGCTCGTTGGGATGAGT+TGG + chr1_4:64241240-64241259 Msa0177320:CDS 50.0%
CACGAGTGGCGAATTGTTAC+TGG + chr1_4:64241307-64241326 Msa0177320:CDS 50.0%
CTGGCCAAGATCCTCCATTA+TGG - chr1_4:64241363-64241382 None:intergenic 50.0%
! CATAATGGAGGATCTTGGCC+AGG + chr1_4:64241361-64241380 Msa0177320:CDS 50.0%
ACAGCTGCTTGCATCAAGAC+AGG + chr1_4:64241751-64241770 Msa0177320:CDS 50.0%
CAGCTGCTTGCATCAAGACA+GGG + chr1_4:64241752-64241771 Msa0177320:CDS 50.0%
TGCCGAGAGTCGTTTACTGA+AGG + chr1_4:64241807-64241826 Msa0177320:CDS 50.0%
! TTTGGTGGCCAAGATGATGC+TGG + chr1_4:64241918-64241937 Msa0177320:CDS 50.0%
GGAAATCATCCCCAAGTGTG+AGG - chr1_4:64241950-64241969 None:intergenic 50.0%
CTATTTCGGCAGGGGACTAA+GGG - chr1_4:64242784-64242803 None:intergenic 50.0%
TCTATTTCGGCAGGGGACTA+AGG - chr1_4:64242785-64242804 None:intergenic 50.0%
CCATCAGCACAAAGCAGAGT+TGG - chr1_4:64240143-64240162 None:intergenic 50.0%
CCAACTCTGCTTTGTGCTGA+TGG + chr1_4:64240140-64240159 Msa0177320:CDS 50.0%
GCAAGATACTGCTGACGGAA+AGG + chr1_4:64240895-64240914 Msa0177320:CDS 50.0%
GACTTTATGCCAACACGTGG+TGG + chr1_4:64241094-64241113 Msa0177320:CDS 50.0%
ATGAAGTAGCCACCACGTGT+TGG - chr1_4:64241106-64241125 None:intergenic 50.0%
ACACGTGGTGGCTACTTCAT+TGG + chr1_4:64241106-64241125 Msa0177320:CDS 50.0%
! AAATGTCAGTCCGGCTCGAA+TGG + chr1_4:64241129-64241148 Msa0177320:CDS 50.0%
!! CGGCTCGAATGGATTTTCGA+TGG + chr1_4:64241140-64241159 Msa0177320:CDS 50.0%
AGCAACTCCAGAGCAGTCAA+TGG + chr1_4:64241201-64241220 Msa0177320:CDS 50.0%
TGAAGCTCGTTGGGATGAGT+TGG + chr1_4:64241240-64241259 Msa0177320:CDS 50.0%
CACGAGTGGCGAATTGTTAC+TGG + chr1_4:64241307-64241326 Msa0177320:CDS 50.0%
CTGGCCAAGATCCTCCATTA+TGG - chr1_4:64241363-64241382 None:intergenic 50.0%
! CATAATGGAGGATCTTGGCC+AGG + chr1_4:64241361-64241380 Msa0177320:CDS 50.0%
ACAGCTGCTTGCATCAAGAC+AGG + chr1_4:64241751-64241770 Msa0177320:CDS 50.0%
CAGCTGCTTGCATCAAGACA+GGG + chr1_4:64241752-64241771 Msa0177320:CDS 50.0%
TGCCGAGAGTCGTTTACTGA+AGG + chr1_4:64241807-64241826 Msa0177320:CDS 50.0%
! TTTGGTGGCCAAGATGATGC+TGG + chr1_4:64241918-64241937 Msa0177320:CDS 50.0%
GGAAATCATCCCCAAGTGTG+AGG - chr1_4:64241950-64241969 None:intergenic 50.0%
ACTCCGCCGGTAACCATAAC+CGG + chr1_4:64237440-64237459 Msa0177320:five_prime_UTR 55.0%
TAGCCGGTTATGGTTACCGG+CGG - chr1_4:64237446-64237465 None:intergenic 55.0%
GGGGAGAAAATAGTCGGGGA+AGG - chr1_4:64237540-64237559 None:intergenic 55.0%
CGCCGGAAAAGGAGAGAGAA+TGG - chr1_4:64237562-64237581 None:intergenic 55.0%
! TCCTTTTCCGGCGAATTCGC+CGG + chr1_4:64237569-64237588 Msa0177320:five_prime_UTR 55.0%
CTAAAACGACGGTGGTTGGC+CGG - chr1_4:64237591-64237610 None:intergenic 55.0%
!! CCAACCACCGTCGTTTTAGC+CGG + chr1_4:64237592-64237611 Msa0177320:five_prime_UTR 55.0%
TCGGCGAAGTGAGATCTCTC+CGG - chr1_4:64237614-64237633 None:intergenic 55.0%
GGAGGAATGGAACGGTTCGT+CGG - chr1_4:64237633-64237652 None:intergenic 55.0%
! AGTCGGCTCTCAGTGTTCGA+TGG + chr1_4:64238198-64238217 Msa0177320:CDS 55.0%
TACTCGCCTGGAGGAAGATC+TGG + chr1_4:64238361-64238380 Msa0177320:CDS 55.0%
GTTGCGAGCAGATGAAGCAG+GGG - chr1_4:64238395-64238414 None:intergenic 55.0%
GAGTTGCGAGCAGATGAAGC+AGG - chr1_4:64238397-64238416 None:intergenic 55.0%
CTCGTTTGAGCCGCATCCAA+TGG + chr1_4:64238414-64238433 Msa0177320:CDS 55.0%
! GCATCGGCAACCATTGGATG+CGG - chr1_4:64238427-64238446 None:intergenic 55.0%
ATCCAATGGTTGCCGATGCC+TGG + chr1_4:64238428-64238447 Msa0177320:CDS 55.0%
TCCAATGGTTGCCGATGCCT+GGG + chr1_4:64238429-64238448 Msa0177320:CDS 55.0%
! TGTGAGTTGAGAGCACGTGC+TGG + chr1_4:64239238-64239257 Msa0177320:intron 55.0%
!! GCTCGTTGGGATGAGTTGGT+TGG + chr1_4:64241244-64241263 Msa0177320:CDS 55.0%
!! GCTCGTTGGGATGAGTTGGT+TGG + chr1_4:64241244-64241263 Msa0177320:CDS 55.0%
ACGGCGTCGTATTGCCTACG+TGG + chr1_4:64237417-64237436 Msa0177320:five_prime_UTR 60.0%
ATTGCCTACGTGGACTCCGC+CGG + chr1_4:64237427-64237446 Msa0177320:five_prime_UTR 60.0%
CCGGCTAAAACGACGGTGGT+TGG - chr1_4:64237595-64237614 None:intergenic 60.0%
CTCTCCGGCTAAAACGACGG+TGG - chr1_4:64237599-64237618 None:intergenic 60.0%
CTCGTTTGCTTGACAGGCCG+AGG + chr1_4:64238245-64238264 Msa0177320:CDS 60.0%
!! TCCCAGGCATCGGCAACCAT+TGG - chr1_4:64238433-64238452 None:intergenic 60.0%
TCTCGGGTGCAGTGCTCCTA+TGG + chr1_4:64241722-64241741 Msa0177320:intron 60.0%
GGTGGCCAAGATGATGCTGG+AGG + chr1_4:64241921-64241940 Msa0177320:CDS 60.0%
GGGGTCCTCCAGCATCATCT+TGG - chr1_4:64241929-64241948 None:intergenic 60.0%
CTGGAGGACCCCTCACACTT+GGG + chr1_4:64241937-64241956 Msa0177320:CDS 60.0%
TGGAGGACCCCTCACACTTG+GGG + chr1_4:64241938-64241957 Msa0177320:CDS 60.0%
TCTCGGGTGCAGTGCTCCTA+TGG + chr1_4:64241722-64241741 Msa0177320:intron 60.0%
GGTGGCCAAGATGATGCTGG+AGG + chr1_4:64241921-64241940 Msa0177320:CDS 60.0%
GGGGTCCTCCAGCATCATCT+TGG - chr1_4:64241929-64241948 None:intergenic 60.0%
CTGGAGGACCCCTCACACTT+GGG + chr1_4:64241937-64241956 Msa0177320:CDS 60.0%
TGGAGGACCCCTCACACTTG+GGG + chr1_4:64241938-64241957 Msa0177320:CDS 60.0%
GTTACCGGCGGAGTCCACGT+AGG - chr1_4:64237434-64237453 None:intergenic 65.0%
GCCGGCGAATTCGCCGGAAA+AGG - chr1_4:64237573-64237592 None:intergenic 65.0%
! TGGTTGGCCGGCGAATTCGC+CGG - chr1_4:64237579-64237598 None:intergenic 65.0%
GCTGGAGGACCCCTCACACT+TGG + chr1_4:64241936-64241955 Msa0177320:CDS 65.0%
GCTGGAGGACCCCTCACACT+TGG + chr1_4:64241936-64241955 Msa0177320:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 64237365 64244849 64237365 ID=Msa0177320;Name=Msa0177320
chr1_4 mRNA 64237365 64244849 64237365 ID=Msa0177320-mRNA-1;Parent=Msa0177320;Name=Msa0177320-mRNA-1;_AED=0.25;_eAED=0.25;_QI=343|0.66|0.57|1|0.83|0.71|7|0|830
chr1_4 exon 64237365 64237657 64237365 ID=Msa0177320-mRNA-1:exon:20871;Parent=Msa0177320-mRNA-1
chr1_4 exon 64238122 64238549 64238122 ID=Msa0177320-mRNA-1:exon:20872;Parent=Msa0177320-mRNA-1
chr1_4 exon 64239756 64240187 64239756 ID=Msa0177320-mRNA-1:exon:20873;Parent=Msa0177320-mRNA-1
chr1_4 exon 64240821 64241382 64240821 ID=Msa0177320-mRNA-1:exon:20874;Parent=Msa0177320-mRNA-1
chr1_4 exon 64241734 64241996 64241734 ID=Msa0177320-mRNA-1:exon:20875;Parent=Msa0177320-mRNA-1
chr1_4 exon 64243641 64244202 64243641 ID=Msa0177320-mRNA-1:exon:20876;Parent=Msa0177320-mRNA-1
chr1_4 exon 64244554 64244849 64244554 ID=Msa0177320-mRNA-1:exon:20877;Parent=Msa0177320-mRNA-1
chr1_4 five_prime_UTR 64237365 64237657 64237365 ID=Msa0177320-mRNA-1:five_prime_utr;Parent=Msa0177320-mRNA-1
chr1_4 five_prime_UTR 64238122 64238171 64238122 ID=Msa0177320-mRNA-1:five_prime_utr;Parent=Msa0177320-mRNA-1
chr1_4 CDS 64238172 64238549 64238172 ID=Msa0177320-mRNA-1:cds;Parent=Msa0177320-mRNA-1
chr1_4 CDS 64239756 64240187 64239756 ID=Msa0177320-mRNA-1:cds;Parent=Msa0177320-mRNA-1
chr1_4 CDS 64240821 64241382 64240821 ID=Msa0177320-mRNA-1:cds;Parent=Msa0177320-mRNA-1
chr1_4 CDS 64241734 64241996 64241734 ID=Msa0177320-mRNA-1:cds;Parent=Msa0177320-mRNA-1
chr1_4 CDS 64243641 64244202 64243641 ID=Msa0177320-mRNA-1:cds;Parent=Msa0177320-mRNA-1
chr1_4 CDS 64244554 64244849 64244554 ID=Msa0177320-mRNA-1:cds;Parent=Msa0177320-mRNA-1
Gene Sequence

>Msa0177320

ATGGATGGGCATATGGGAATTAGGAAAGTCGGCTCTCAGTGTTCGATGGCTGAGATGGATGATTTCGATCTCACTCGTTTGCTTGACAGGCCGAGGCTAAACATAGAGAGACAGAGATCATTTGATGAGAGGTCCCTTAGTGAATTGTCTGTTGGTTTTGCAAGGGCTGGGTTAGATAACTATGACAATTACTCGCCTGGAGGAAGATCTGGTTTTAACACCCCTGCTTCATCTGCTCGCAACTCGTTTGAGCCGCATCCAATGGTTGCCGATGCCTGGGAATCTCTCAGAAAATCTCTAGTCCATTTTAGAGGTGCACCTGTTGGCACAATTGCAGCTGTTGATCATCAAGCAGAGGAAGTTCTAAATTACGATCAGGTTTTTGTTCGAGATTTTGTCCCAAGTGCTCTAGCCTTTTTGATGAATGGTGAACCGGAAATAGTAAAAAATTTCTTGTTAAAGACACTACATCTTCAGGGGTGGGAGAAAAGAGTAGATAGGTTTAAACTTGGGGAAGGTGTGATGCCAGCTAGTTTCAAAGTCCTTCATGATGCCGTTAGGAAAACAGATACTCTTATTGCAGATTTTGGCGAAAGTGCAATCGGAAGAGTTGCTCCTGTTGACTCTGGATTCTGGTGGATCATTTTGCTTCGTGCTTACACAAAATCTACAGGGGACTTAACTCTGTCTGAATCTGATAGTTGTCAAAAAGGAATGAAACTTATATTGACTTTATGCTTGTCAGAGGGGTTTGACACATTTCCAACTCTGCTTTGTGCTGATGGATGCTGCATGATTGATAGAAGAATGGGTGTTTATGGATATCCTATTGAGATTCAAGCACTTTTCTTCATGGCATTGAGAAGTGCTTTGTCCATGCTCAAGCAAGATACTGCTGACGGAAAGGAGTGTGTAGAGCGTGTTGTGAAGCGTTTGCATGCACTAAGTTTTCACATGAGAAGCTACTTTTGGCTTGACTTCCAGCAACTAAATGACATTTATCGGTACAAGACTGAGGAGTACTCACATACTGCAGTAAATAAGTTTAATGTTATTCCGGATTCAATTCCAGAATGGGTGTTTGACTTTATGCCAACACGTGGTGGCTACTTCATTGGAAATGTCAGTCCGGCTCGAATGGATTTTCGATGGTTTGCTTTAGGAAACTGTGTTGCAATTCTTTCTTCTTTAGCAACTCCAGAGCAGTCAATGGCAATCATGGATCTTATTGAAGCTCGTTGGGATGAGTTGGTTGGAGAAATGCCGCTAAAAATTAGTTACCCTGCAATAGAAAGTCACGAGTGGCGAATTGTTACTGGTTGTGATCCTAAAAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAGTGCTCCTATGGCTTGTAACAGCTGCTTGCATCAAGACAGGGCGACCACAAATAGCAAGACGTGCAATTGAACTTGCCGAGAGTCGTTTACTGAAGGATGGATGGCCTGAATATTACGATGGTAAACTTGGAAGATATGTTGGGAAACAGGCAAGAAAATACCAAACATGGTCTATTGCGGGTTATTTGGTGGCCAAGATGATGCTGGAGGACCCCTCACACTTGGGGATGATTTCCCTTGAAGAAGACAAGCAGATGAAACCAGGTGTTTATGGATATCCTATTGAGATTCAAGCACTTTTCTTCATGGCATTGAGAAGTGCTTTGTCCATGCTCAAGCAAGATACTGCTGACGGAAAGGAGTGTGTAGAGCGTGTTGTGAAGCGTTTGCATGCACTAAGTTTTCACATGAGAAGCTACTTTTGGCTTGACTTCCAGCAACTAAATGACATTTATCGGTACAAGACTGAGGAGTACTCACATACTGCAGTAAATAAGTTTAATGTTATTCCGGATTCAATTCCAGAATGGGTGTTTGACTTTATGCCAACACGTGGTGGCTACTTCATTGGAAATGTCAGTCCGGCTCGAATGGATTTTCGATGGTTTGCTTTAGGAAACTGTGTTGCAATTCTTTCTTCTTTAGCAACTCCAGAGCAGTCAATGGCAATCATGGATCTTATTGAAGCTCGTTGGGATGAGTTGGTTGGAGAAATGCCGCTAAAAATTAGTTACCCTGCAATAGAAAGTCACGAGTGGCGAATTGTTACTGGTTGTGATCCTAAAAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAGTGCTCCTATGGCTTGTAACAGCTGCTTGCATCAAGACAGGGCGACCACAAATAGCAAGACGTGCAATTGAACTTGCCGAGAGTCGTTTACTGAAGGATGGATGGCCTGAATATTACGATGGTAAACTTGGAAGATATGTTGGGAAACAGGCAAGAAAATACCAAACATGGTCTATTGCGGGTTATTTGGTGGCCAAGATGATGCTGGAGGACCCCTCACACTTGGGGATGATTTCCCTTGAAGAAGACAAGCAGATGAAACCAGTGATTAAAAGATCATCTTCTTGGACTTGCTGA
Protein sequence

>Msa0177320

MDGHMGIRKVGSQCSMAEMDDFDLTRLLDRPRLNIERQRSFDERSLSELSVGFARAGLDNYDNYSPGGRSGFNTPASSARNSFEPHPMVADAWESLRKSLVHFRGAPVGTIAAVDHQAEEVLNYDQVFVRDFVPSALAFLMNGEPEIVKNFLLKTLHLQGWEKRVDRFKLGEGVMPASFKVLHDAVRKTDTLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDLTLSESDSCQKGMKLILTLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRSALSMLKQDTADGKECVERVVKRLHALSFHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIPDSIPEWVFDFMPTRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDLIEARWDELVGEMPLKISYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLVTAACIKTGRPQIARRAIELAESRLLKDGWPEYYDGKLGRYVGKQARKYQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQMKPGVYGYPIEIQALFFMALRSALSMLKQDTADGKECVERVVKRLHALSFHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIPDSIPEWVFDFMPTRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDLIEARWDELVGEMPLKISYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLVTAACIKTGRPQIARRAIELAESRLLKDGWPEYYDGKLGRYVGKQARKYQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQMKPVIKRSSSWTC*