AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0619730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0619730 MtrunA17_Chr8g0384431 94.794 826 26 1 1 826 1 809 0.0 1620
Msa0619730 MtrunA17_Chr3g0130381 73.082 821 185 8 1 818 1 788 0.0 1228
Msa0619730 MtrunA17_Chr3g0125511 56.744 823 284 9 1 819 1 755 0.0 948
Msa0619730 MtrunA17_Chr8g0372471 55.288 747 286 10 77 808 179 892 0.0 833
Msa0619730 MtrunA17_Chr5g0437501 53.005 549 238 5 270 811 75 610 0.0 624
Msa0619730 MtrunA17_Chr3g0113981 54.981 522 220 5 287 808 164 670 0.0 608
Msa0619730 MtrunA17_Chr1g0155141 50.000 528 242 5 283 808 194 701 0.0 590
Msa0619730 MtrunA17_Chr1g0159741 48.221 506 242 9 288 785 141 634 6.60e-165 493
Msa0619730 MtrunA17_Chr5g0404771 47.568 555 229 9 21 528 20 559 7.63e-164 488
Msa0619730 MtrunA17_Chr3g0112341 44.404 554 279 11 252 789 107 647 7.67e-164 491
Msa0619730 MtrunA17_Chr1g0183721 44.981 538 252 14 298 810 71 589 1.81e-148 449
Msa0619730 MtrunA17_Chr1g0167381 44.653 533 261 13 298 810 101 619 6.74e-147 446
Msa0619730 MtrunA17_Chr5g0435751 42.058 554 275 12 249 789 79 599 8.76e-147 445
Msa0619730 MtrunA17_Chr1g0187601 42.911 529 268 13 298 806 100 614 8.92e-141 430
Msa0619730 MtrunA17_Chr8g0350351 41.985 524 269 14 298 806 97 600 9.40e-140 426
Msa0619730 MtrunA17_Chr5g0404761 62.898 283 101 2 531 813 1 279 5.26e-138 410
Msa0619730 MtrunA17_Chr7g0246681 41.098 528 270 14 298 807 84 588 5.51e-138 421
Msa0619730 MtrunA17_Chr4g0055031 42.301 539 270 15 288 806 86 603 7.41e-134 412
Msa0619730 MtrunA17_Chr6g0472571 42.300 513 256 18 298 790 114 606 1.51e-132 409
Msa0619730 MtrunA17_Chr8g0369481 40.643 529 275 13 298 806 79 588 9.56e-130 400
Msa0619730 MtrunA17_Chr8g0388881 40.335 538 281 18 291 806 101 620 3.51e-129 400
Msa0619730 MtrunA17_Chr7g0214551 40.884 543 285 12 260 786 22 544 2.81e-128 395
Msa0619730 MtrunA17_Chr5g0409411 40.323 558 293 14 275 809 53 593 1.14e-127 395
Msa0619730 MtrunA17_Chr8g0361791 41.487 511 266 14 298 794 93 584 2.11e-127 395
Msa0619730 MtrunA17_Chr1g0203741 39.706 544 290 16 262 786 69 593 1.40e-126 393
Msa0619730 MtrunA17_Chr7g0246701 40.613 522 270 17 290 790 103 605 8.76e-125 389
Msa0619730 MtrunA17_Chr3g0092501 40.918 523 270 14 298 806 94 591 1.07e-123 385
Msa0619730 MtrunA17_Chr8g0350391 39.706 544 276 20 298 810 114 636 1.20e-123 386
Msa0619730 MtrunA17_Chr5g0416991 40.875 526 275 13 298 806 93 599 1.62e-123 384
Msa0619730 MtrunA17_Chr1g0171781 40.684 526 278 15 298 806 95 603 4.97e-122 380
Msa0619730 MtrunA17_Chr5g0426281 32.824 524 296 14 301 790 151 652 1.05e-84 284
Msa0619730 MtrunA17_Chr3g0115931 33.208 533 291 17 298 790 163 670 9.53e-84 282
Msa0619730 MtrunA17_Chr4g0043131 50.735 136 61 3 664 796 36 168 4.28e-38 140
Msa0619730 MtrunA17_Chr4g0043121 28.662 314 197 10 298 596 95 396 6.80e-36 141
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0619730 AT5G64030.1 64.286 840 268 8 1 819 1 829 0.0 1125
Msa0619730 AT1G29470.1 60.462 822 270 14 1 819 1 770 0.0 1001
Msa0619730 AT1G29470.2 60.462 822 270 14 1 819 1 770 0.0 1001
Msa0619730 AT2G34300.2 58.759 822 284 11 1 819 1 770 0.0 985
Msa0619730 AT2G34300.3 58.759 822 284 11 1 819 1 770 0.0 985
Msa0619730 AT2G34300.1 58.759 822 284 11 1 819 1 770 0.0 985
Msa0619730 AT3G51070.1 53.743 895 323 12 1 808 1 891 0.0 966
Msa0619730 AT3G51070.2 53.902 833 293 12 1 746 1 829 0.0 890
Msa0619730 AT2G40280.1 54.735 528 220 6 286 812 78 587 0.0 620
Msa0619730 AT3G56080.1 53.704 540 228 7 273 808 89 610 0.0 612
Msa0619730 AT1G19430.1 49.333 525 245 6 286 808 219 724 0.0 577
Msa0619730 AT1G19430.3 49.333 525 245 6 286 808 219 724 0.0 577
Msa0619730 AT3G56080.2 55.042 476 196 6 273 744 89 550 0.0 559
Msa0619730 AT5G06050.1 44.425 565 277 14 252 794 99 648 2.09e-169 506
Msa0619730 AT1G77260.1 44.186 559 283 10 243 785 86 631 2.23e-163 489
Msa0619730 AT2G39750.1 45.009 531 270 11 265 789 157 671 4.74e-163 490
Msa0619730 AT3G23300.2 43.797 532 266 14 298 810 88 605 5.12e-143 436
Msa0619730 AT3G23300.1 43.797 532 266 14 298 810 88 605 5.12e-143 436
Msa0619730 AT4G14360.1 43.233 532 269 14 298 810 85 602 3.07e-142 433
Msa0619730 AT4G14360.2 43.233 532 269 14 298 810 85 602 3.07e-142 433
Msa0619730 AT5G14430.1 46.733 505 236 13 298 786 89 576 2.60e-140 429
Msa0619730 AT1G04430.1 42.963 540 262 17 300 810 95 617 2.83e-139 426
Msa0619730 AT1G04430.3 42.963 540 262 17 300 810 95 617 2.83e-139 426
Msa0619730 AT1G04430.2 42.963 540 262 17 300 810 95 617 2.83e-139 426
Msa0619730 AT5G14430.2 46.139 505 239 13 298 786 89 576 3.64e-138 423
Msa0619730 AT4G00740.1 39.885 524 280 11 299 807 91 594 1.32e-137 421
Msa0619730 AT4G00740.2 39.885 524 280 11 299 807 91 594 1.32e-137 421
Msa0619730 AT1G31850.1 41.541 532 268 13 298 806 85 596 2.19e-134 413
Msa0619730 AT1G31850.2 41.541 532 268 13 298 806 85 596 2.19e-134 413
Msa0619730 AT1G31850.4 41.541 532 268 13 298 806 85 596 2.19e-134 413
Msa0619730 AT1G31850.3 41.541 532 268 13 298 806 85 596 2.19e-134 413
Msa0619730 AT5G04060.1 43.264 527 260 13 298 806 92 597 7.31e-133 409
Msa0619730 AT4G19120.1 41.495 535 264 13 298 806 79 590 2.00e-132 408
Msa0619730 AT4G19120.2 41.495 535 264 13 298 806 79 590 2.00e-132 408
Msa0619730 AT1G33170.1 41.808 531 272 14 298 806 119 634 4.95e-131 405
Msa0619730 AT4G10440.1 41.061 509 270 12 298 790 102 596 2.76e-130 403
Msa0619730 AT1G26850.2 41.634 514 267 15 298 794 95 592 3.13e-130 402
Msa0619730 AT1G26850.1 41.634 514 267 15 298 794 95 592 3.13e-130 402
Msa0619730 AT3G10200.1 42.659 504 255 12 298 787 81 564 7.26e-129 398
Msa0619730 AT1G19430.2 44.444 396 200 5 286 680 219 595 1.08e-126 393
Msa0619730 AT2G45750.1 40.698 516 267 17 298 790 96 595 2.91e-125 390
Msa0619730 AT4G18030.1 40.850 541 278 15 287 806 84 603 2.73e-124 387
Msa0619730 AT4G00750.1 42.394 493 245 17 320 789 125 601 2.28e-123 385
Msa0619730 AT2G43200.2 40.945 508 267 14 298 789 100 590 3.65e-122 381
Msa0619730 AT2G43200.1 40.945 508 267 14 298 789 100 590 3.65e-122 381
Msa0619730 AT3G10200.2 43.035 481 240 12 298 764 81 541 7.05e-122 380
Msa0619730 AT4G19120.3 41.667 444 213 12 298 718 79 499 2.54e-103 328
Msa0619730 AT1G26850.3 40.241 415 216 14 298 696 95 493 2.01e-88 289
Msa0619730 AT1G78240.1 31.099 537 309 16 291 790 149 661 3.62e-83 280
Msa0619730 AT1G78240.2 31.099 537 309 16 291 790 149 661 3.62e-83 280
Msa0619730 AT1G13860.4 32.844 545 299 16 298 807 90 602 9.10e-78 263
Msa0619730 AT1G13860.3 32.844 545 299 16 298 807 90 602 9.10e-78 263
Msa0619730 AT1G13860.1 32.844 545 299 16 298 807 90 602 9.10e-78 263
Msa0619730 AT1G13860.5 32.844 545 299 16 298 807 90 602 9.10e-78 263
Msa0619730 AT1G13860.2 34.762 420 231 11 413 807 45 446 1.55e-70 239
Msa0619730 AT2G03480.1 32.270 533 306 17 299 803 96 601 5.09e-69 240
Msa0619730 AT2G03480.2 32.700 526 302 16 299 803 96 590 6.09e-69 239
Msa0619730 AT2G03480.3 31.660 259 162 7 299 544 96 352 3.57e-32 130

Find 249 sgRNAs with CRISPR-Local

Find 362 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCTGAAGTTGGAGTTTA+TGG 0.092408 4_2:+70941860 Msa0619730:CDS
GGTGATTTGCTCAGTCTTTC+TGG 0.096552 4_2:-70941824 None:intergenic
CGATTTCTCTTCCTGCTTTC+CGG 0.102196 4_2:-70939396 None:intergenic
TTGTACCTTCTCTCTGCTTT+TGG 0.173033 4_2:-70940122 None:intergenic
CTTTGAAGGATTTGAAAATT+TGG 0.173333 4_2:+70942122 Msa0619730:CDS
TCTAATGAGCTACTCCCTTC+TGG 0.179725 4_2:+70939800 Msa0619730:CDS
TATTCTTGACTACCAAAATT+TGG 0.212050 4_2:+70942946 Msa0619730:three_prime_UTR
GTGTCCAAGTCTTATCTAAA+TGG 0.222273 4_2:+70941935 Msa0619730:CDS
GATGTCTTCTTGTTCTGATT+TGG 0.232136 4_2:-70939473 None:intergenic
ACAAAACTAATACCAAATTT+TGG 0.233814 4_2:-70942958 None:intergenic
TATACGAAAGATGATGATTT+TGG 0.244828 4_2:-70938227 None:intergenic
TCCTGCTTTCCGGGCATAAC+AGG 0.246833 4_2:-70939386 None:intergenic
GATTTCTCTTCCTGCTTTCC+GGG 0.249825 4_2:-70939395 None:intergenic
TGAGCTTCATGTTCATCTTT+TGG 0.251202 4_2:-70940918 None:intergenic
AGGAATTCTGATCACATTCT+TGG 0.266568 4_2:+70942875 Msa0619730:three_prime_UTR
AGATCTGCTTCTTTCATAAT+AGG 0.272763 4_2:+70938367 Msa0619730:five_prime_UTR
TTTGGTGGGGTAAAGTTGAT+AGG 0.277208 4_2:-70938209 None:intergenic
CTGTAACTTTCACCCAATTC+TGG 0.287508 4_2:-70940271 None:intergenic
CAAGCTCTCCAGCTCCTTAA+TGG 0.288378 4_2:-70942498 None:intergenic
CAAACAAACACGTGTGATAT+TGG 0.295996 4_2:+70940824 Msa0619730:CDS
AGACCACGTTCATAAATAAT+TGG 0.297024 4_2:-70942184 None:intergenic
GGGAATGGGGCAATGGGTTA+AGG 0.300574 4_2:-70938143 None:intergenic
AATACAAGGGGCACCAGAAT+TGG 0.314022 4_2:+70940258 Msa0619730:CDS
TGAGAAATGAAATCTTGAAT+TGG 0.314158 4_2:-70938275 None:intergenic
ACATATAGAAGGCTCATTCT+TGG 0.315163 4_2:-70941588 None:intergenic
TTTGAAGGATTTGAAAATTT+GGG 0.315252 4_2:+70942123 Msa0619730:CDS
GACTTACACTAAAGATTTGC+AGG 0.324033 4_2:+70942550 Msa0619730:CDS
TAGGCCGCCACATGGACTTC+TGG 0.327048 4_2:-70942586 None:intergenic
GAAGCGCACCATGTTTGAAT+TGG 0.327189 4_2:-70940325 None:intergenic
TGTTTGCCCCAGGCAATATC+AGG 0.327849 4_2:-70940807 None:intergenic
GTTCCATATTTCTACATCTT+CGG 0.333336 4_2:-70941356 None:intergenic
TAATGATACATAACGAATAA+TGG 0.337904 4_2:-70942753 None:intergenic
ATCCTCCTTGGTAGCTTCCT+CGG 0.338678 4_2:-70939336 None:intergenic
GAACGAACGAAGAAAGAAAA+AGG 0.343097 4_2:-70938299 None:intergenic
ATGGACATGAGATCAGTTTA+TGG 0.344407 4_2:+70941992 Msa0619730:CDS
ATGATTGATAGTTGAGGTTC+TGG 0.346250 4_2:+70942915 Msa0619730:three_prime_UTR
CAGAATTGGGTGAAAGTTAC+AGG 0.346425 4_2:+70940272 Msa0619730:CDS
TTCCATATTTCTACATCTTC+GGG 0.348032 4_2:-70941355 None:intergenic
GACTGAGCAAATCACCTTAC+TGG 0.348700 4_2:+70941831 Msa0619730:CDS
CTAATGAGCTACTCCCTTCT+GGG 0.351886 4_2:+70939801 Msa0619730:CDS
CTCTATGCTTGGTTGGGCTA+TGG 0.353786 4_2:+70939168 Msa0619730:CDS
TCGGGCAGCTTCTGATAAAT+AGG 0.357067 4_2:-70941337 None:intergenic
GACCTGGTGGTTTCTTTGTA+TGG 0.360085 4_2:+70941305 Msa0619730:CDS
AGTCTTTCTGGCCACTCCCC+TGG 0.363157 4_2:-70941812 None:intergenic
CTGTAGTTGCCGAGGTTGAT+AGG 0.364325 4_2:+70942429 Msa0619730:CDS
CCACGTTCTGTCGAACTAAC+TGG 0.372630 4_2:-70941779 None:intergenic
CAGGTTTGCAGCAGCTTTGA+AGG 0.373216 4_2:+70942108 Msa0619730:intron
ATTTATGAACGTGGTCTGTT+TGG 0.379065 4_2:+70942190 Msa0619730:CDS
GATGACATCGTCTGTAGTTC+CGG 0.379624 4_2:+70939193 Msa0619730:CDS
AATGAAACTACAACTCAAAC+TGG 0.386627 4_2:+70939842 Msa0619730:CDS
ATTGGGCGTTTATATCCTTC+AGG 0.393045 4_2:-70940091 None:intergenic
TGATCAGCAGTAAAATCTTC+AGG 0.398020 4_2:-70941893 None:intergenic
GATGAGAGCAATAACAAATC+TGG 0.398080 4_2:+70939530 Msa0619730:CDS
AGCAATCTACCGGGTTCAAT+TGG 0.400598 4_2:+70939924 Msa0619730:CDS
GATGAGAGCAATAACAAATC+TGG 0.403002 4_2:+70939503 Msa0619730:CDS
TAAAATCACCTAACTCTTGT+TGG 0.404507 4_2:-70942696 None:intergenic
GTAACATGGTGCCGTAGTTA+AGG 0.404794 4_2:+70942855 Msa0619730:three_prime_UTR
GGATGCGGCGTTGCCAGCTT+TGG 0.406344 4_2:+70940852 Msa0619730:CDS
AGATGCAAGTGAAAATAAAA+AGG 0.406679 4_2:+70939658 Msa0619730:CDS
GATTCAAACGATAATAAATC+TGG 0.407305 4_2:+70939632 Msa0619730:CDS
TGGTTATCAAATTCTGAAGT+TGG 0.407557 4_2:+70941851 Msa0619730:CDS
CATGTGGCGGCCTACAGAAT+TGG 0.409128 4_2:+70942595 Msa0619730:CDS
CACTAAGCTTGCTGAATACA+AGG 0.413110 4_2:+70940244 Msa0619730:CDS
TGCCCGAAGATGTAGAAATA+TGG 0.415143 4_2:+70941353 Msa0619730:CDS
AAATATATTTACCTGTTGTA+TGG 0.415427 4_2:-70940360 None:intergenic
TCTTCAGGAGACTTATCTTC+AGG 0.416574 4_2:-70939428 None:intergenic
TATGTCATCTTGGTATCTTC+AGG 0.418811 4_2:-70939443 None:intergenic
AGGCAGGTAGGAGGATCTTC+AGG 0.419164 4_2:-70940058 None:intergenic
TTGGGTAATGAATGTCGTTC+CGG 0.420730 4_2:+70942141 Msa0619730:CDS
AAGCGCACCATGTTTGAATT+GGG 0.421782 4_2:-70940324 None:intergenic
TCAAGGCATGGAATGTAGTC+AGG 0.422263 4_2:-70939971 None:intergenic
CCCTGTTATGCCCGGAAAGC+AGG 0.423452 4_2:+70939385 Msa0619730:CDS
TTTGTTGCTCTATGCTTGGT+TGG 0.424129 4_2:+70939161 Msa0619730:CDS
AGACACTGCTGAGACCATTA+AGG 0.424525 4_2:+70942484 Msa0619730:CDS
GTCTGTACCTGATATTGCCT+GGG 0.424607 4_2:+70940800 Msa0619730:intron
CTTAGCATTGTTATCCTCCT+TGG 0.425739 4_2:-70939348 None:intergenic
TCCTCCTTGGTAGCTTCCTC+GGG 0.425882 4_2:-70939335 None:intergenic
GGTCACAATGGCCAGGGGAG+TGG 0.427651 4_2:+70941801 Msa0619730:CDS
GGAATGGGGCAATGGGTTAA+GGG 0.429792 4_2:-70938142 None:intergenic
TTATATTGATCACCACTGTA+TGG 0.429815 4_2:+70942814 Msa0619730:three_prime_UTR
ATGAGATGCCAACAAGAGTT+AGG 0.429876 4_2:+70942688 Msa0619730:three_prime_UTR
ATACTCTACTGTCTCGAATT+CGG 0.430578 4_2:-70942647 None:intergenic
TTGTTGCTCTATGCTTGGTT+GGG 0.432621 4_2:+70939162 Msa0619730:CDS
TAGACCTTTCATCGGACTCT+TGG 0.434605 4_2:-70939739 None:intergenic
GGTACAATTTGCACTTGAAA+GGG 0.436429 4_2:+70940941 Msa0619730:CDS
TGTGATGGGAATGGGGCAAT+GGG 0.437449 4_2:-70938149 None:intergenic
TCAGAAGTTTGAAGATAAGA+AGG 0.440496 4_2:+70939304 Msa0619730:CDS
AGTCTGTACCTGATATTGCC+TGG 0.440752 4_2:+70940799 Msa0619730:intron
ACAGAGCGAGGTGAAGAATC+AGG 0.442429 4_2:+70939256 Msa0619730:CDS
GAGAAATGAAATCTTGAATT+GGG 0.443254 4_2:-70938274 None:intergenic
TTGGTGGGGTAAAGTTGATA+GGG 0.443355 4_2:-70938208 None:intergenic
ATGTGATGGGAATGGGGCAA+TGG 0.446650 4_2:-70938150 None:intergenic
ATGGCATCAAATACTCTAGC+AGG 0.448584 4_2:-70941011 None:intergenic
AAAGAGAAAGCCACCAAAGC+TGG 0.449809 4_2:-70940865 None:intergenic
GGGCAATGGGTTAAGGGAAA+AGG 0.450141 4_2:-70938136 None:intergenic
TGTGTTTGTTGCTCTATGCT+TGG 0.454286 4_2:+70939157 Msa0619730:CDS
AGATAGTAAGACAGAAGAAA+AGG 0.454824 4_2:+70939700 Msa0619730:CDS
AGGGATAAACTTAATAAAGT+TGG 0.455976 4_2:+70941515 Msa0619730:CDS
TCATAGTCTTGACATATAGA+AGG 0.456886 4_2:-70941599 None:intergenic
TAAATAATTGGAAGTGTGTC+CGG 0.459194 4_2:-70942172 None:intergenic
TCCATGCCTTGACAACTTGA+AGG 0.459542 4_2:+70939982 Msa0619730:CDS
CGGAAAGCAGGAAGAGAAAT+CGG 0.459697 4_2:+70939397 Msa0619730:CDS
TCATAACACTCATTAGAAGT+TGG 0.460853 4_2:-70941557 None:intergenic
TGGATCAGTATATGTCATCT+TGG 0.462212 4_2:-70939453 None:intergenic
TGTAGGTGGCAAACTTCTCT+TGG 0.463244 4_2:+70941264 Msa0619730:intron
TCCTGCTATATCTGCTGTGA+TGG 0.463748 4_2:+70940968 Msa0619730:CDS
ATACAAGGGGCACCAGAATT+GGG 0.464985 4_2:+70940259 Msa0619730:CDS
TTTCTCGCTCTCATCAGAAT+CGG 0.465423 4_2:-70939603 None:intergenic
TGCGGCGTTGCCAGCTTTGG+TGG 0.467886 4_2:+70940855 Msa0619730:CDS
CTTCTGAGGATTGCTATTAG+TGG 0.470869 4_2:-70939288 None:intergenic
TGTCCAAGTCTTATCTAAAT+GGG 0.471066 4_2:+70941936 Msa0619730:CDS
AGGTACAATTTGCACTTGAA+AGG 0.472614 4_2:+70940940 Msa0619730:CDS
TTACATTGACACCATACAAC+AGG 0.472893 4_2:+70940349 Msa0619730:CDS
TGTTTGGCATATATCATGAT+TGG 0.477645 4_2:+70942206 Msa0619730:CDS
CTCTAACAAAAGCAATGTGT+TGG 0.477646 4_2:+70941474 Msa0619730:CDS
TTGACAACTTGAAGGCGATT+CGG 0.478459 4_2:+70939990 Msa0619730:CDS
GCAGTAAAATCTTCAGGAGC+AGG 0.479751 4_2:-70941887 None:intergenic
TCAGAATTTGATAACCAGTA+AGG 0.480321 4_2:-70941845 None:intergenic
GGGAAGTGGTGTCTATCAGC+AGG 0.480892 4_2:+70941495 Msa0619730:CDS
CATTAAGGAGCTGGAGAGCT+TGG 0.481031 4_2:+70942499 Msa0619730:CDS
CACACGTGTTTGTTTGCCCC+AGG 0.482612 4_2:-70940817 None:intergenic
ATTGAACCCGGTAGATTGCT+TGG 0.487643 4_2:-70939921 None:intergenic
AACACTATGAACACAGAGAA+AGG 0.487854 4_2:+70940029 Msa0619730:CDS
AAATTGAATGTGATGGGAAT+GGG 0.490863 4_2:-70938157 None:intergenic
GAACAAGAAGACATCTGATT+CGG 0.493963 4_2:+70939481 Msa0619730:CDS
GAGACAGTAGAGTATGCTAT+TGG 0.494819 4_2:+70942617 Msa0619730:CDS
CTTCTCACTCTCATCAGAAT+CGG 0.495820 4_2:-70939576 None:intergenic
AAATCCTCCAAGCAATCTAC+CGG 0.500678 4_2:+70939914 Msa0619730:CDS
CCGAGGTTGATAGGATTCTC+AGG 0.501423 4_2:+70942438 Msa0619730:CDS
ATCAAATACTCTAGCAGGGA+AGG 0.501685 4_2:-70941006 None:intergenic
TCTACAGCGTGCACAATGAA+TGG 0.504753 4_2:-70941030 None:intergenic
AGAGTTCCGTGGCATATAGA+AGG 0.507563 4_2:+70941050 Msa0619730:CDS
TTGAATTGGGTTCCACCACC+AGG 0.509928 4_2:-70940311 None:intergenic
TGCTGAGACCATTAAGGAGC+TGG 0.513322 4_2:+70942490 Msa0619730:CDS
GAACGTGGGTCACAATGGCC+AGG 0.519506 4_2:+70941794 Msa0619730:CDS
TCTAACAAAAGCAATGTGTT+GGG 0.523325 4_2:+70941475 Msa0619730:CDS
ATCTGCATGAAGTAGATCAT+AGG 0.524703 4_2:-70942257 None:intergenic
AAGAAACAGAGACCAAAGAA+AGG 0.526718 4_2:-70938085 None:intergenic
CCTGCTTTCCGGGCATAACA+GGG 0.529227 4_2:-70939385 None:intergenic
TGTCGTTCCGGTAGACTCAC+CGG 0.531879 4_2:+70942153 Msa0619730:CDS
TTCTTATCTTCAAACTTCTG+AGG 0.533134 4_2:-70939302 None:intergenic
AAAAGATGAACATGAAGCTC+AGG 0.533172 4_2:+70940920 Msa0619730:CDS
GCCTTCAAGTTGTCAAGGCA+TGG 0.539567 4_2:-70939983 None:intergenic
TTCAGGAAGAGCGACAAGGC+AGG 0.541534 4_2:-70940074 None:intergenic
AAGTCTTATCTAAATGGGAT+TGG 0.544074 4_2:+70941941 Msa0619730:CDS
TCTTGAATTGGGATGGTGAA+AGG 0.545219 4_2:-70938263 None:intergenic
TGCCTTGTCGCTCTTCCTGA+AGG 0.545666 4_2:+70940076 Msa0619730:CDS
GATATAAACGCCCAATCGAA+TGG 0.547059 4_2:+70940098 Msa0619730:CDS
AAAATTGAATGTGATGGGAA+TGG 0.547739 4_2:-70938158 None:intergenic
AAAAGCAATGTGTTGGGAAG+TGG 0.548445 4_2:+70941481 Msa0619730:CDS
AATCCCATTTAGATAAGACT+TGG 0.550835 4_2:-70941939 None:intergenic
TTTCATTCAGAAGCTCTGAC+TGG 0.555443 4_2:-70939826 None:intergenic
GACCCCGTCTACAGAAATGA+AGG 0.557235 4_2:+70941451 Msa0619730:intron
CTTCTCATTAGACCTTTCAT+CGG 0.557553 4_2:-70939747 None:intergenic
TTGTGCATGCAACTTTGCAA+TGG 0.557899 4_2:-70941752 None:intergenic
GCATGGAATGTAGTCAGGGC+CGG 0.560863 4_2:-70939966 None:intergenic
GTCCATGACATTGCGCACAT+TGG 0.560985 4_2:-70941975 None:intergenic
TATTGAAAATTGAATGTGAT+GGG 0.561369 4_2:-70938163 None:intergenic
GAAAACAACCCTGTTATGCC+CGG 0.562365 4_2:+70939377 Msa0619730:CDS
TAATGGTCTCAGCAGTGTCT+CGG 0.565162 4_2:-70942481 None:intergenic
TTCCACCACCAGGAAAAGTA+AGG 0.565768 4_2:-70940301 None:intergenic
CCAGTTAGTTCGACAGAACG+TGG 0.567966 4_2:+70941779 Msa0619730:CDS
GATAGGATTCTCAGGCCTGA+GGG 0.568699 4_2:+70942446 Msa0619730:CDS
CAGAAGTTTGAAGATAAGAA+GGG 0.569315 4_2:+70939305 Msa0619730:CDS
CCTGCTATATCTGCTGTGAT+GGG 0.569858 4_2:+70940969 Msa0619730:CDS
CTTCCAATTATTTATGAACG+TGG 0.571347 4_2:+70942181 Msa0619730:CDS
AACGTGGGTCACAATGGCCA+GGG 0.572813 4_2:+70941795 Msa0619730:CDS
CCCATCACAGCAGATATAGC+AGG 0.575073 4_2:-70940969 None:intergenic
GTCCAATGTGCGCAATGTCA+TGG 0.576181 4_2:+70941973 Msa0619730:CDS
GAACCCGGTAGATTGCTTGG+AGG 0.577245 4_2:-70939918 None:intergenic
TTAAGGGAAAAGGATGAAGA+AGG 0.578727 4_2:-70938126 None:intergenic
ACTTACACTAAAGATTTGCA+GGG 0.585635 4_2:+70942551 Msa0619730:CDS
ATGAAGTAGATCATAGGACC+TGG 0.586094 4_2:-70942251 None:intergenic
TAATGAGCTACTCCCTTCTG+GGG 0.587270 4_2:+70939802 Msa0619730:CDS
CCATGTTGTCACTTATCAAA+AGG 0.588599 4_2:-70939064 None:intergenic
AGGATGAAGAAGGATAGAGT+TGG 0.589002 4_2:-70938116 None:intergenic
TGATCAGAATTCCTTAACTA+CGG 0.590344 4_2:-70942866 None:intergenic
AATGAAATCTTGAATTGGGA+TGG 0.593099 4_2:-70938270 None:intergenic
CAATTCTGTAGGCCGCCACA+TGG 0.593696 4_2:-70942594 None:intergenic
CTTTGGATGATTGATAGTTG+AGG 0.594228 4_2:+70942909 Msa0619730:three_prime_UTR
AATTGAATGTGATGGGAATG+GGG 0.596877 4_2:-70938156 None:intergenic
CTTGGTGACATCTATGCAGT+GGG 0.597887 4_2:+70942517 Msa0619730:CDS
GAATCGCCTTCAAGTTGTCA+AGG 0.598521 4_2:-70939988 None:intergenic
ATGATGATCCTAATGCCGCC+TGG 0.598814 4_2:+70941618 Msa0619730:CDS
GGAGTAGCTCATTAGAACCC+TGG 0.600496 4_2:-70939793 None:intergenic
AGAGCGACAAGGCAGGTAGG+AGG 0.606982 4_2:-70940067 None:intergenic
TTACTGCTGATCATGAACAC+TGG 0.609094 4_2:+70941903 Msa0619730:CDS
TAACAAATCTGGTTCTGATG+AGG 0.609989 4_2:+70939541 Msa0619730:CDS
CGGACAATAAGCTTTCCCTC+AGG 0.610538 4_2:-70942461 None:intergenic
AGTGTGTCCGGTGAGTCTAC+CGG 0.613797 4_2:-70942160 None:intergenic
AAGCTTAGTGTGTGGAACGT+TGG 0.614215 4_2:-70940231 None:intergenic
GGAAGAGCGACAAGGCAGGT+AGG 0.614855 4_2:-70940070 None:intergenic
TGTTGTCACTTATCAAAAGG+TGG 0.616743 4_2:-70939061 None:intergenic
AAACTCTGCAATGTCACTGC+CGG 0.617134 4_2:+70939947 Msa0619730:CDS
GAAATACCTTCTATATGCCA+CGG 0.618360 4_2:-70941056 None:intergenic
TCTACTGTCTCCAATTCTGT+AGG 0.618641 4_2:-70942605 None:intergenic
ACACGTGTGATATTGGATGT+TGG 0.619996 4_2:+70940831 Msa0619730:CDS
GCTTGGTGACATCTATGCAG+TGG 0.621238 4_2:+70942516 Msa0619730:CDS
GACATGAGATCAGTTTATGG+AGG 0.624346 4_2:+70941995 Msa0619730:CDS
ACTAAGCTTGCTGAATACAA+GGG 0.624777 4_2:+70940245 Msa0619730:CDS
TATTCAGCAAGCTTAGTGTG+TGG 0.626139 4_2:-70940239 None:intergenic
ATGGCCCAAAAGCAGAGAGA+AGG 0.626143 4_2:+70940117 Msa0619730:CDS
GTTTGAAGCTGTAGTTGCCG+AGG 0.628136 4_2:+70942421 Msa0619730:CDS
TGATAGGATTCTCAGGCCTG+AGG 0.629871 4_2:+70942445 Msa0619730:CDS
GGTGACATCTATGCAGTGGG+AGG 0.630863 4_2:+70942520 Msa0619730:CDS
TCAAATACTCTAGCAGGGAA+GGG 0.631133 4_2:-70941005 None:intergenic
GTACAATTTGCACTTGAAAG+GGG 0.633712 4_2:+70940942 Msa0619730:CDS
CCTGAGAATCCTATCAACCT+CGG 0.634465 4_2:-70942438 None:intergenic
CGACAGAACGTGGGTCACAA+TGG 0.634623 4_2:+70941789 Msa0619730:CDS
GTGATATTGGATGTTGGATG+CGG 0.635039 4_2:+70940837 Msa0619730:CDS
GACCATACAAAGAAACCACC+AGG 0.636775 4_2:-70941307 None:intergenic
TCTGCCCGAGGAAGCTACCA+AGG 0.636962 4_2:+70939331 Msa0619730:CDS
CTGCTGTGATGGGCACAAAG+AGG 0.637182 4_2:+70940979 Msa0619730:CDS
GCAGAGTTTCCAATTGAACC+CGG 0.637837 4_2:-70939933 None:intergenic
ACCGTTGAGCAGTAACTCGA+CGG 0.639254 4_2:-70939125 None:intergenic
ATATTGAAAATTGAATGTGA+TGG 0.640293 4_2:-70938164 None:intergenic
CAAGGCATGGAATGTAGTCA+GGG 0.640525 4_2:-70939970 None:intergenic
TGGCATCAAATACTCTAGCA+GGG 0.641803 4_2:-70941010 None:intergenic
TAAATGGGATTGGCATTCAG+TGG 0.645780 4_2:+70941951 Msa0619730:CDS
GTAACCAAGAGTCCGATGAA+AGG 0.646102 4_2:+70939735 Msa0619730:CDS
AATCATTTAGCACATATCCC+AGG 0.649524 4_2:+70942233 Msa0619730:CDS
ACATGAGATCAGTTTATGGA+GGG 0.652022 4_2:+70941996 Msa0619730:CDS
TGAAGTAGATCATAGGACCT+GGG 0.654597 4_2:-70942250 None:intergenic
CTAAGCTTGCTGAATACAAG+GGG 0.655529 4_2:+70940246 Msa0619730:CDS
ATCCTTCAGGAAGAGCGACA+AGG 0.657623 4_2:-70940078 None:intergenic
TCCGTCGAGTTACTGCTCAA+CGG 0.657836 4_2:+70939124 Msa0619730:CDS
ACGTGGGTCACAATGGCCAG+GGG 0.659025 4_2:+70941796 Msa0619730:CDS
AGAAACAAGCTTCCATACAG+TGG 0.659895 4_2:-70942826 None:intergenic
GAATAGTTATCTCTGCATTG+TGG 0.661597 4_2:-70938338 None:intergenic
AATCCTCCAAGCAATCTACC+GGG 0.661733 4_2:+70939915 Msa0619730:CDS
TGAGGTGAAAGGACAGAGCG+AGG 0.662207 4_2:+70939244 Msa0619730:CDS
AATGAGCTACTCCCTTCTGG+GGG 0.663250 4_2:+70939803 Msa0619730:CDS
TTGAATAGAGTATTGCGACC+TGG 0.667810 4_2:+70941289 Msa0619730:CDS
GTGTCCAGAAGTCCATGTGG+CGG 0.672312 4_2:+70942582 Msa0619730:CDS
GGAAGTGGTGTCTATCAGCA+GGG 0.674006 4_2:+70941496 Msa0619730:CDS
TGATACATAACGAATAATGG+AGG 0.676175 4_2:-70942750 None:intergenic
GTGCACGCTGTAGAGTTCCG+TGG 0.676281 4_2:+70941039 Msa0619730:CDS
AATAGAGTATTGCGACCTGG+TGG 0.685656 4_2:+70941292 Msa0619730:CDS
GAAGATGTAGAAATATGGAA+CGG 0.686612 4_2:+70941358 Msa0619730:CDS
GAAGAAAAGGCAGATCAAAG+TGG 0.688007 4_2:+70939713 Msa0619730:CDS
TCTGTACCTGATATTGCCTG+GGG 0.689283 4_2:+70940801 Msa0619730:CDS
CAGTTAGTTCGACAGAACGT+GGG 0.696778 4_2:+70941780 Msa0619730:CDS
GGTGTTTCACGGATTCTATG+CGG 0.701593 4_2:+70938028 None:intergenic
CAGAGACTAGGAGAGAGTGA+CGG 0.708417 4_2:-70938051 None:intergenic
TAAGAAGGGAGATCTGCCCG+AGG 0.713293 4_2:+70939319 Msa0619730:CDS
GGTGGAACCCAATTCAAACA+TGG 0.718496 4_2:+70940317 Msa0619730:CDS
TTGTGGTGTTGTAACGCATG+AGG 0.719024 4_2:-70938321 None:intergenic
GCCCGAGGAAGCTACCAAGG+AGG 0.738197 4_2:+70939334 Msa0619730:CDS
TATGTGTCCAGAAGTCCATG+TGG 0.749324 4_2:+70942579 Msa0619730:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCTAATTAAAATTCAATTT+TGG + chr4_2:70940561-70940580 Msa0619730:intron 10.0%
!! TTAAAAATAAAAACAGAAAA+AGG + chr4_2:70941678-70941697 Msa0619730:intron 10.0%
!!! AATCACAAATTTTATATGAT+TGG + chr4_2:70938920-70938939 Msa0619730:intron 15.0%
!! ATGTATTATGGATTTAATTA+TGG - chr4_2:70940429-70940448 None:intergenic 15.0%
!!! ATTGAATTTTAATTAGAACT+AGG - chr4_2:70940559-70940578 None:intergenic 15.0%
!! TATTGAAAATTGAATGTGAT+GGG - chr4_2:70938166-70938185 None:intergenic 20.0%
!! ATATTGAAAATTGAATGTGA+TGG - chr4_2:70938167-70938186 None:intergenic 20.0%
!! TACATAACATATATCACTAA+TGG - chr4_2:70938680-70938699 None:intergenic 20.0%
!!! CTTTAATTTTCCTTAATTCA+TGG - chr4_2:70938871-70938890 None:intergenic 20.0%
!! CAAAAACCTAGTTATATATA+TGG + chr4_2:70938895-70938914 Msa0619730:intron 20.0%
!! AAATATATTTACCTGTTGTA+TGG - chr4_2:70940363-70940382 None:intergenic 20.0%
!! TTGGAAGATATAATTCAAAA+TGG + chr4_2:70940580-70940599 Msa0619730:intron 20.0%
!! CAAAATGGAAACATAATATT+TGG + chr4_2:70940595-70940614 Msa0619730:intron 20.0%
!! AAATCTTCAAACAAGTAATT+AGG - chr4_2:70940622-70940641 None:intergenic 20.0%
!!! TACTTGTTTGAAGATTTTTA+TGG + chr4_2:70940625-70940644 Msa0619730:intron 20.0%
!!! GAATATTTTTTCCTAAACAT+TGG - chr4_2:70940651-70940670 None:intergenic 20.0%
!! TATAATCCATGTAAATAAAC+TGG + chr4_2:70941206-70941225 Msa0619730:intron 20.0%
!!! TAAACTGGCTTTTATAATTT+TGG + chr4_2:70941221-70941240 Msa0619730:intron 20.0%
!! AATTAAATTCAGAGTAACAT+TGG - chr4_2:70942041-70942060 None:intergenic 20.0%
!! TTTGAAGGATTTGAAAATTT+GGG + chr4_2:70942123-70942142 Msa0619730:CDS 20.0%
!! TAATGATACATAACGAATAA+TGG - chr4_2:70942756-70942775 None:intergenic 20.0%
!!! TTGTTTCTTTTTTTGTAACA+TGG + chr4_2:70942841-70942860 Msa0619730:three_prime_UTR 20.0%
!!! ACAAAACTAATACCAAATTT+TGG - chr4_2:70942961-70942980 None:intergenic 20.0%
!! TATACGAAAGATGATGATTT+TGG - chr4_2:70938230-70938249 None:intergenic 25.0%
! GAGAAATGAAATCTTGAATT+GGG - chr4_2:70938277-70938296 None:intergenic 25.0%
! TGAGAAATGAAATCTTGAAT+TGG - chr4_2:70938278-70938297 None:intergenic 25.0%
! GGAAAAGTGAAATGAATAAA+AGG - chr4_2:70938464-70938483 None:intergenic 25.0%
!! AACATATATCACTAATGGAT+TGG - chr4_2:70938675-70938694 None:intergenic 25.0%
! TCTTGAATGATATCATGATT+TGG + chr4_2:70938840-70938859 Msa0619730:intron 25.0%
! GATTCACCATATATATAACT+AGG - chr4_2:70938904-70938923 None:intergenic 25.0%
! GATTCAAACGATAATAAATC+TGG + chr4_2:70939632-70939651 Msa0619730:CDS 25.0%
! AGATGCAAGTGAAAATAAAA+AGG + chr4_2:70939658-70939677 Msa0619730:CDS 25.0%
!!! CATAGTGTTTAGTAGTTTTA+AGG - chr4_2:70940018-70940037 None:intergenic 25.0%
!! GCTTTGTCAATTTTCATTAT+TGG + chr4_2:70940157-70940176 Msa0619730:intron 25.0%
! AAAATGTTCTCTTTCAGATA+TGG + chr4_2:70940204-70940223 Msa0619730:intron 25.0%
! AACATTAGAACAAACACATA+CGG - chr4_2:70940406-70940425 None:intergenic 25.0%
! CATCTAGTTATACAATCTAA+GGG + chr4_2:70940671-70940690 Msa0619730:intron 25.0%
!! AATGTGGTTAGATGAAATTT+TGG + chr4_2:70941111-70941130 Msa0619730:intron 25.0%
!! ACAAGCTTGAAATTTTTATG+CGG + chr4_2:70941138-70941157 Msa0619730:intron 25.0%
! TAAAAGCCAGTTTATTTACA+TGG - chr4_2:70941215-70941234 None:intergenic 25.0%
!! ACTATTAAGCGTTTCAATTT+TGG + chr4_2:70941407-70941426 Msa0619730:intron 25.0%
! AGGGATAAACTTAATAAAGT+TGG + chr4_2:70941515-70941534 Msa0619730:CDS 25.0%
!! CTTTGAAGGATTTGAAAATT+TGG + chr4_2:70942122-70942141 Msa0619730:CDS 25.0%
!! TGTTTTCAAAGCTTAAGAAA+AGG + chr4_2:70942284-70942303 Msa0619730:CDS 25.0%
! TATTCTTGACTACCAAAATT+TGG + chr4_2:70942946-70942965 Msa0619730:three_prime_UTR 25.0%
!!! GTTTTTTTCGTTCCTTTCTT+TGG + chr4_2:70938073-70938092 Msa0619730:five_prime_UTR 30.0%
! AAATTGAATGTGATGGGAAT+GGG - chr4_2:70938160-70938179 None:intergenic 30.0%
! AAAATTGAATGTGATGGGAA+TGG - chr4_2:70938161-70938180 None:intergenic 30.0%
AATGAAATCTTGAATTGGGA+TGG - chr4_2:70938273-70938292 None:intergenic 30.0%
AGATCTGCTTCTTTCATAAT+AGG + chr4_2:70938367-70938386 Msa0619730:five_prime_UTR 30.0%
TAGATGCATAGAATAAAACG+TGG - chr4_2:70938490-70938509 None:intergenic 30.0%
TTAAGCGATCAATCAAGAAA+CGG - chr4_2:70938518-70938537 None:intergenic 30.0%
TAGCAGATCTAATAGATTGA+TGG - chr4_2:70938633-70938652 None:intergenic 30.0%
AGATGAGTCGAATAAAAATG+AGG + chr4_2:70939226-70939245 Msa0619730:CDS 30.0%
TCGAATAAAAATGAGGTGAA+AGG + chr4_2:70939233-70939252 Msa0619730:CDS 30.0%
TTCTTATCTTCAAACTTCTG+AGG - chr4_2:70939305-70939324 None:intergenic 30.0%
TCAGAAGTTTGAAGATAAGA+AGG + chr4_2:70939304-70939323 Msa0619730:CDS 30.0%
CAGAAGTTTGAAGATAAGAA+GGG + chr4_2:70939305-70939324 Msa0619730:CDS 30.0%
AGATAGTAAGACAGAAGAAA+AGG + chr4_2:70939700-70939719 Msa0619730:CDS 30.0%
AGATGAAAATACCAAAAACC+AGG + chr4_2:70939775-70939794 Msa0619730:CDS 30.0%
GATGAAAATACCAAAAACCA+GGG + chr4_2:70939776-70939795 Msa0619730:CDS 30.0%
AATGAAACTACAACTCAAAC+TGG + chr4_2:70939842-70939861 Msa0619730:CDS 30.0%
! AGAGAAGGTACAAATAAATC+AGG + chr4_2:70940132-70940151 Msa0619730:intron 30.0%
AACTGACAGTACATGTATTA+TGG - chr4_2:70940441-70940460 None:intergenic 30.0%
! GATTTTTATGGCCAATGTTT+AGG + chr4_2:70940637-70940656 Msa0619730:intron 30.0%
CCTTAGATTGTATAACTAGA+TGG - chr4_2:70940673-70940692 None:intergenic 30.0%
CCATCTAGTTATACAATCTA+AGG + chr4_2:70940670-70940689 Msa0619730:intron 30.0%
! TTCCATATTTCTACATCTTC+GGG - chr4_2:70941358-70941377 None:intergenic 30.0%
! GTTCCATATTTCTACATCTT+CGG - chr4_2:70941359-70941378 None:intergenic 30.0%
GAAGATGTAGAAATATGGAA+CGG + chr4_2:70941358-70941377 Msa0619730:CDS 30.0%
TCTAACAAAAGCAATGTGTT+GGG + chr4_2:70941475-70941494 Msa0619730:CDS 30.0%
TCATAACACTCATTAGAAGT+TGG - chr4_2:70941560-70941579 None:intergenic 30.0%
! TCATAGTCTTGACATATAGA+AGG - chr4_2:70941602-70941621 None:intergenic 30.0%
TCAGTAAAGGAAAAAATACC+AGG - chr4_2:70941639-70941658 None:intergenic 30.0%
!!! AAAACAGAAAAAGGCGTTTT+TGG + chr4_2:70941687-70941706 Msa0619730:intron 30.0%
! TCAGAATTTGATAACCAGTA+AGG - chr4_2:70941848-70941867 None:intergenic 30.0%
!! TGGTTATCAAATTCTGAAGT+TGG + chr4_2:70941851-70941870 Msa0619730:CDS 30.0%
!! AATTCTGAAGTTGGAGTTTA+TGG + chr4_2:70941860-70941879 Msa0619730:CDS 30.0%
! TGTCCAAGTCTTATCTAAAT+GGG + chr4_2:70941936-70941955 Msa0619730:CDS 30.0%
AATCCCATTTAGATAAGACT+TGG - chr4_2:70941942-70941961 None:intergenic 30.0%
! AAGTCTTATCTAAATGGGAT+TGG + chr4_2:70941941-70941960 Msa0619730:CDS 30.0%
! TAAATAATTGGAAGTGTGTC+CGG - chr4_2:70942175-70942194 None:intergenic 30.0%
CTTCCAATTATTTATGAACG+TGG + chr4_2:70942181-70942200 Msa0619730:CDS 30.0%
AGACCACGTTCATAAATAAT+TGG - chr4_2:70942187-70942206 None:intergenic 30.0%
TGTTTGGCATATATCATGAT+TGG + chr4_2:70942206-70942225 Msa0619730:CDS 30.0%
TACATTTACCAGCAAAAACT+TGG + chr4_2:70942331-70942350 Msa0619730:intron 30.0%
!! CAAAAACTTGGTTTTTCAGA+AGG + chr4_2:70942343-70942362 Msa0619730:intron 30.0%
!!! TCATTTTGAAACGTTGTTTG+TGG + chr4_2:70942387-70942406 Msa0619730:intron 30.0%
ACTTACACTAAAGATTTGCA+GGG + chr4_2:70942551-70942570 Msa0619730:CDS 30.0%
TAAAATCACCTAACTCTTGT+TGG - chr4_2:70942699-70942718 None:intergenic 30.0%
! AACAAGAGTTAGGTGATTTT+AGG + chr4_2:70942698-70942717 Msa0619730:three_prime_UTR 30.0%
! ACAAGAGTTAGGTGATTTTA+GGG + chr4_2:70942699-70942718 Msa0619730:three_prime_UTR 30.0%
TGATACATAACGAATAATGG+AGG - chr4_2:70942753-70942772 None:intergenic 30.0%
TTATATTGATCACCACTGTA+TGG + chr4_2:70942814-70942833 Msa0619730:three_prime_UTR 30.0%
TGATCAGAATTCCTTAACTA+CGG - chr4_2:70942869-70942888 None:intergenic 30.0%
! TCACATTCTTGGAATTTTAG+AGG + chr4_2:70942886-70942905 Msa0619730:three_prime_UTR 30.0%
GAACGAAAAAAACAGAGACT+AGG - chr4_2:70938066-70938085 None:intergenic 35.0%
AAGAAACAGAGACCAAAGAA+AGG - chr4_2:70938088-70938107 None:intergenic 35.0%
TTAAGGGAAAAGGATGAAGA+AGG - chr4_2:70938129-70938148 None:intergenic 35.0%
! AATTGAATGTGATGGGAATG+GGG - chr4_2:70938159-70938178 None:intergenic 35.0%
!! GAAAGATGATGATTTTGGTG+GGG - chr4_2:70938225-70938244 None:intergenic 35.0%
!! CGAAAGATGATGATTTTGGT+GGG - chr4_2:70938226-70938245 None:intergenic 35.0%
! ACGAAAGATGATGATTTTGG+TGG - chr4_2:70938227-70938246 None:intergenic 35.0%
GAACGAACGAAGAAAGAAAA+AGG - chr4_2:70938302-70938321 None:intergenic 35.0%
GAATAGTTATCTCTGCATTG+TGG - chr4_2:70938341-70938360 None:intergenic 35.0%
AGAAGTGGATAAATGTGTGA+AGG - chr4_2:70938425-70938444 None:intergenic 35.0%
GCATAGAATAAAACGTGGAA+AGG - chr4_2:70938485-70938504 None:intergenic 35.0%
!! ATGGATTGGACGCATTATTA+AGG - chr4_2:70938661-70938680 None:intergenic 35.0%
!! ACTTTTGATTGAAGCGTGTT+CGG + chr4_2:70938708-70938727 Msa0619730:intron 35.0%
TTTGGCAATGCCATGAATTA+AGG + chr4_2:70938858-70938877 Msa0619730:intron 35.0%
GCAGAATACTGAAGAATCTT+TGG - chr4_2:70938963-70938982 None:intergenic 35.0%
! GCATTCGATTTTCAACATTG+TGG + chr4_2:70938981-70939000 Msa0619730:intron 35.0%
! TCGATTTTCAACATTGTGGA+TGG + chr4_2:70938985-70939004 Msa0619730:intron 35.0%
! TGTTGTCACTTATCAAAAGG+TGG - chr4_2:70939064-70939083 None:intergenic 35.0%
! CCATGTTGTCACTTATCAAA+AGG - chr4_2:70939067-70939086 None:intergenic 35.0%
! CCTTTTGATAAGTGACAACA+TGG + chr4_2:70939064-70939083 Msa0619730:exon 35.0%
TATGTCATCTTGGTATCTTC+AGG - chr4_2:70939446-70939465 None:intergenic 35.0%
TGGATCAGTATATGTCATCT+TGG - chr4_2:70939456-70939475 None:intergenic 35.0%
GATGTCTTCTTGTTCTGATT+TGG - chr4_2:70939476-70939495 None:intergenic 35.0%
GAACAAGAAGACATCTGATT+CGG + chr4_2:70939481-70939500 Msa0619730:CDS 35.0%
GATGAGAGCAATAACAAATC+TGG + chr4_2:70939503-70939522 Msa0619730:CDS 35.0%
GATGAGAGCAATAACAAATC+TGG + chr4_2:70939503-70939522 Msa0619730:CDS 35.0%
!! TAACAAATCTGGTTCTGATG+AGG + chr4_2:70939514-70939533 Msa0619730:CDS 35.0%
TGATGAGAGCGAGAAAAAAT+CGG + chr4_2:70939610-70939629 Msa0619730:CDS 35.0%
CTTCTCATTAGACCTTTCAT+CGG - chr4_2:70939750-70939769 None:intergenic 35.0%
!!! AACTGGATCTTTTTCAACTC+AGG + chr4_2:70939859-70939878 Msa0619730:CDS 35.0%
AACACTATGAACACAGAGAA+AGG + chr4_2:70940029-70940048 Msa0619730:CDS 35.0%
!! ACTAAGCTTGCTGAATACAA+GGG + chr4_2:70940245-70940264 Msa0619730:CDS 35.0%
TTACATTGACACCATACAAC+AGG + chr4_2:70940349-70940368 Msa0619730:CDS 35.0%
! AGATGAGAAATTTGCTCTAG+TGG - chr4_2:70940493-70940512 None:intergenic 35.0%
! GTTTTCATCCTAGAATTGCT+AGG + chr4_2:70940716-70940735 Msa0619730:intron 35.0%
CAAACAAACACGTGTGATAT+TGG + chr4_2:70940824-70940843 Msa0619730:CDS 35.0%
! TGAGCTTCATGTTCATCTTT+TGG - chr4_2:70940921-70940940 None:intergenic 35.0%
AAAAGATGAACATGAAGCTC+AGG + chr4_2:70940920-70940939 Msa0619730:CDS 35.0%
AGGTACAATTTGCACTTGAA+AGG + chr4_2:70940940-70940959 Msa0619730:CDS 35.0%
GGTACAATTTGCACTTGAAA+GGG + chr4_2:70940941-70940960 Msa0619730:CDS 35.0%
GTACAATTTGCACTTGAAAG+GGG + chr4_2:70940942-70940961 Msa0619730:CDS 35.0%
GAAATACCTTCTATATGCCA+CGG - chr4_2:70941059-70941078 None:intergenic 35.0%
CATTCACTGCTGTAAAAGTT+AGG - chr4_2:70941095-70941114 None:intergenic 35.0%
! AACTTTTACAGCAGTGAATG+TGG + chr4_2:70941095-70941114 Msa0619730:intron 35.0%
TCTAAATGCCAAAATGATGC+TGG - chr4_2:70941181-70941200 None:intergenic 35.0%
TTCACTATTTGTGCACATGT+AGG + chr4_2:70941247-70941266 Msa0619730:intron 35.0%
CTCTAACAAAAGCAATGTGT+TGG + chr4_2:70941474-70941493 Msa0619730:CDS 35.0%
ACATATAGAAGGCTCATTCT+TGG - chr4_2:70941591-70941610 None:intergenic 35.0%
GTAAAGGAAAAAATACCAGG+CGG - chr4_2:70941636-70941655 None:intergenic 35.0%
ACATTCTAATCGCTCAGTAA+AGG - chr4_2:70941652-70941671 None:intergenic 35.0%
TGATCAGCAGTAAAATCTTC+AGG - chr4_2:70941896-70941915 None:intergenic 35.0%
! GTGTCCAAGTCTTATCTAAA+TGG + chr4_2:70941935-70941954 Msa0619730:CDS 35.0%
ATGGACATGAGATCAGTTTA+TGG + chr4_2:70941992-70942011 Msa0619730:CDS 35.0%
ACATGAGATCAGTTTATGGA+GGG + chr4_2:70941996-70942015 Msa0619730:CDS 35.0%
!!! GTTTGACACCTTCTGTTTTT+TGG + chr4_2:70942082-70942101 Msa0619730:intron 35.0%
ATTTATGAACGTGGTCTGTT+TGG + chr4_2:70942190-70942209 Msa0619730:CDS 35.0%
AATCATTTAGCACATATCCC+AGG + chr4_2:70942233-70942252 Msa0619730:CDS 35.0%
ATCTGCATGAAGTAGATCAT+AGG - chr4_2:70942260-70942279 None:intergenic 35.0%
! CTGAAAAACCAAGTTTTTGC+TGG - chr4_2:70942342-70942361 None:intergenic 35.0%
GACTTACACTAAAGATTTGC+AGG + chr4_2:70942550-70942569 Msa0619730:CDS 35.0%
ATACTCTACTGTCTCGAATT+CGG - chr4_2:70942650-70942669 None:intergenic 35.0%
AGGAATTCTGATCACATTCT+TGG + chr4_2:70942875-70942894 Msa0619730:three_prime_UTR 35.0%
!! TCTTGGAATTTTAGAGGCTT+TGG + chr4_2:70942892-70942911 Msa0619730:three_prime_UTR 35.0%
! CTTTGGATGATTGATAGTTG+AGG + chr4_2:70942909-70942928 Msa0619730:three_prime_UTR 35.0%
! ATGATTGATAGTTGAGGTTC+TGG + chr4_2:70942915-70942934 Msa0619730:three_prime_UTR 35.0%
AGGATGAAGAAGGATAGAGT+TGG - chr4_2:70938119-70938138 None:intergenic 40.0%
!! TTGGTGGGGTAAAGTTGATA+GGG - chr4_2:70938211-70938230 None:intergenic 40.0%
! TTTGGTGGGGTAAAGTTGAT+AGG - chr4_2:70938212-70938231 None:intergenic 40.0%
TCTTGAATTGGGATGGTGAA+AGG - chr4_2:70938266-70938285 None:intergenic 40.0%
! CACGCTTCAATCAAAAGTGT+AGG - chr4_2:70938706-70938725 None:intergenic 40.0%
CTGTTCGGGAATACAAACAA+CGG - chr4_2:70939018-70939037 None:intergenic 40.0%
CAGATAGTTTAGACCTGTTC+GGG - chr4_2:70939032-70939051 None:intergenic 40.0%
GCAGATAGTTTAGACCTGTT+CGG - chr4_2:70939033-70939052 None:intergenic 40.0%
! TGTGTTTGTTGCTCTATGCT+TGG + chr4_2:70939157-70939176 Msa0619730:CDS 40.0%
TTTGTTGCTCTATGCTTGGT+TGG + chr4_2:70939161-70939180 Msa0619730:CDS 40.0%
TTGTTGCTCTATGCTTGGTT+GGG + chr4_2:70939162-70939181 Msa0619730:CDS 40.0%
! GACTCATCTACATTTTGCAC+CGG - chr4_2:70939215-70939234 None:intergenic 40.0%
! CTTCTGAGGATTGCTATTAG+TGG - chr4_2:70939291-70939310 None:intergenic 40.0%
CTTAGCATTGTTATCCTCCT+TGG - chr4_2:70939351-70939370 None:intergenic 40.0%
!! ATAACAGGGTTGTTTTCGGA+CGG - chr4_2:70939374-70939393 None:intergenic 40.0%
TCTTCAGGAGACTTATCTTC+AGG - chr4_2:70939431-70939450 None:intergenic 40.0%
CTTCTCACTCTCATCAGAAT+CGG - chr4_2:70939579-70939598 None:intergenic 40.0%
TTTCTCGCTCTCATCAGAAT+CGG - chr4_2:70939606-70939625 None:intergenic 40.0%
GAAGAAAAGGCAGATCAAAG+TGG + chr4_2:70939713-70939732 Msa0619730:CDS 40.0%
!! CTCATTAGAACCCTGGTTTT+TGG - chr4_2:70939789-70939808 None:intergenic 40.0%
! TTTCATTCAGAAGCTCTGAC+TGG - chr4_2:70939829-70939848 None:intergenic 40.0%
!!! CTTGGAGGATTTTTGAGACT+CGG - chr4_2:70939906-70939925 None:intergenic 40.0%
AAATCCTCCAAGCAATCTAC+CGG + chr4_2:70939914-70939933 Msa0619730:CDS 40.0%
TTGACAACTTGAAGGCGATT+CGG + chr4_2:70939990-70940009 Msa0619730:CDS 40.0%
ATTGGGCGTTTATATCCTTC+AGG - chr4_2:70940094-70940113 None:intergenic 40.0%
GATATAAACGCCCAATCGAA+TGG + chr4_2:70940098-70940117 Msa0619730:CDS 40.0%
!! TGTACCTTCTCTCTGCTTTT+GGG - chr4_2:70940124-70940143 None:intergenic 40.0%
! TTGTACCTTCTCTCTGCTTT+TGG - chr4_2:70940125-70940144 None:intergenic 40.0%
TATTCAGCAAGCTTAGTGTG+TGG - chr4_2:70940242-70940261 None:intergenic 40.0%
!! CACTAAGCTTGCTGAATACA+AGG + chr4_2:70940244-70940263 Msa0619730:CDS 40.0%
!! CTAAGCTTGCTGAATACAAG+GGG + chr4_2:70940246-70940265 Msa0619730:CDS 40.0%
CTGTAACTTTCACCCAATTC+TGG - chr4_2:70940274-70940293 None:intergenic 40.0%
CAGAATTGGGTGAAAGTTAC+AGG + chr4_2:70940272-70940291 Msa0619730:CDS 40.0%
AAGCGCACCATGTTTGAATT+GGG - chr4_2:70940327-70940346 None:intergenic 40.0%
CAATTCTGCCTAGCAATTCT+AGG - chr4_2:70940727-70940746 None:intergenic 40.0%
ACACGTGTGATATTGGATGT+TGG + chr4_2:70940831-70940850 Msa0619730:CDS 40.0%
GTGATATTGGATGTTGGATG+CGG + chr4_2:70940837-70940856 Msa0619730:CDS 40.0%
TCAAATACTCTAGCAGGGAA+GGG - chr4_2:70941008-70941027 None:intergenic 40.0%
ATCAAATACTCTAGCAGGGA+AGG - chr4_2:70941009-70941028 None:intergenic 40.0%
TGGCATCAAATACTCTAGCA+GGG - chr4_2:70941013-70941032 None:intergenic 40.0%
ATGGCATCAAATACTCTAGC+AGG - chr4_2:70941014-70941033 None:intergenic 40.0%
! GCATTTCACCAGCATCATTT+TGG + chr4_2:70941170-70941189 Msa0619730:intron 40.0%
ACTATTTGTGCACATGTAGG+TGG + chr4_2:70941250-70941269 Msa0619730:intron 40.0%
!! TTGAATAGAGTATTGCGACC+TGG + chr4_2:70941289-70941308 Msa0619730:CDS 40.0%
TGCCCGAAGATGTAGAAATA+TGG + chr4_2:70941353-70941372 Msa0619730:CDS 40.0%
AGAGCCTTCATTTCTGTAGA+CGG - chr4_2:70941458-70941477 None:intergenic 40.0%
AAAAGCAATGTGTTGGGAAG+TGG + chr4_2:70941481-70941500 Msa0619730:CDS 40.0%
AAAAAATACCAGGCGGCATT+AGG - chr4_2:70941629-70941648 None:intergenic 40.0%
TGATATTCCTCATTCATCGC+AGG + chr4_2:70941723-70941742 Msa0619730:intron 40.0%
TTGTGCATGCAACTTTGCAA+TGG - chr4_2:70941755-70941774 None:intergenic 40.0%
TTACTGCTGATCATGAACAC+TGG + chr4_2:70941903-70941922 Msa0619730:CDS 40.0%
! TAAATGGGATTGGCATTCAG+TGG + chr4_2:70941951-70941970 Msa0619730:CDS 40.0%
GACATGAGATCAGTTTATGG+AGG + chr4_2:70941995-70942014 Msa0619730:CDS 40.0%
TGTCAAACACAGGGAAGTAA+TGG - chr4_2:70942070-70942089 None:intergenic 40.0%
!! AACAGAAGGTGTCAAACACA+GGG - chr4_2:70942079-70942098 None:intergenic 40.0%
!! AAACAGAAGGTGTCAAACAC+AGG - chr4_2:70942080-70942099 None:intergenic 40.0%
!!! ACCTTCTGTTTTTTGGATCC+AGG + chr4_2:70942089-70942108 Msa0619730:intron 40.0%
ACCTGGATCCAAAAAACAGA+AGG - chr4_2:70942093-70942112 None:intergenic 40.0%
TTGGGTAATGAATGTCGTTC+CGG + chr4_2:70942141-70942160 Msa0619730:CDS 40.0%
TGAAGTAGATCATAGGACCT+GGG - chr4_2:70942253-70942272 None:intergenic 40.0%
ATGAAGTAGATCATAGGACC+TGG - chr4_2:70942254-70942273 None:intergenic 40.0%
TCTACTGTCTCCAATTCTGT+AGG - chr4_2:70942608-70942627 None:intergenic 40.0%
GAGACAGTAGAGTATGCTAT+TGG + chr4_2:70942617-70942636 Msa0619730:CDS 40.0%
ATGAGATGCCAACAAGAGTT+AGG + chr4_2:70942688-70942707 Msa0619730:three_prime_UTR 40.0%
AGAAACAAGCTTCCATACAG+TGG - chr4_2:70942829-70942848 None:intergenic 40.0%
!! TTGTGGTGTTGTAACGCATG+AGG - chr4_2:70938324-70938343 None:intergenic 45.0%
CGTTGTTTGTATTCCCGAAC+AGG + chr4_2:70939016-70939035 Msa0619730:intron 45.0%
GATGACATCGTCTGTAGTTC+CGG + chr4_2:70939193-70939212 Msa0619730:CDS 45.0%
!! GGGCATAACAGGGTTGTTTT+CGG - chr4_2:70939378-70939397 None:intergenic 45.0%
GAAAACAACCCTGTTATGCC+CGG + chr4_2:70939377-70939396 Msa0619730:CDS 45.0%
GATTTCTCTTCCTGCTTTCC+GGG - chr4_2:70939398-70939417 None:intergenic 45.0%
CGATTTCTCTTCCTGCTTTC+CGG - chr4_2:70939399-70939418 None:intergenic 45.0%
CGGAAAGCAGGAAGAGAAAT+CGG + chr4_2:70939397-70939416 Msa0619730:CDS 45.0%
GTAACCAAGAGTCCGATGAA+AGG + chr4_2:70939735-70939754 Msa0619730:CDS 45.0%
TAGACCTTTCATCGGACTCT+TGG - chr4_2:70939742-70939761 None:intergenic 45.0%
TCTAATGAGCTACTCCCTTC+TGG + chr4_2:70939800-70939819 Msa0619730:CDS 45.0%
CTAATGAGCTACTCCCTTCT+GGG + chr4_2:70939801-70939820 Msa0619730:CDS 45.0%
TAATGAGCTACTCCCTTCTG+GGG + chr4_2:70939802-70939821 Msa0619730:CDS 45.0%
AATCCTCCAAGCAATCTACC+GGG + chr4_2:70939915-70939934 Msa0619730:CDS 45.0%
ATTGAACCCGGTAGATTGCT+TGG - chr4_2:70939924-70939943 None:intergenic 45.0%
AGCAATCTACCGGGTTCAAT+TGG + chr4_2:70939924-70939943 Msa0619730:CDS 45.0%
GCAGAGTTTCCAATTGAACC+CGG - chr4_2:70939936-70939955 None:intergenic 45.0%
AAACTCTGCAATGTCACTGC+CGG + chr4_2:70939947-70939966 Msa0619730:CDS 45.0%
CAAGGCATGGAATGTAGTCA+GGG - chr4_2:70939973-70939992 None:intergenic 45.0%
TCAAGGCATGGAATGTAGTC+AGG - chr4_2:70939974-70939993 None:intergenic 45.0%
TCCATGCCTTGACAACTTGA+AGG + chr4_2:70939982-70940001 Msa0619730:CDS 45.0%
!! GAATCGCCTTCAAGTTGTCA+AGG - chr4_2:70939991-70940010 None:intergenic 45.0%
! TGCTTTTGGGCCATTCGATT+GGG - chr4_2:70940111-70940130 None:intergenic 45.0%
AAGCTTAGTGTGTGGAACGT+TGG - chr4_2:70940234-70940253 None:intergenic 45.0%
!! AATACAAGGGGCACCAGAAT+TGG + chr4_2:70940258-70940277 Msa0619730:CDS 45.0%
!! ATACAAGGGGCACCAGAATT+GGG + chr4_2:70940259-70940278 Msa0619730:CDS 45.0%
!! GAGTACCTTACTTTTCCTGG+TGG + chr4_2:70940296-70940315 Msa0619730:CDS 45.0%
!! TACCTTACTTTTCCTGGTGG+TGG + chr4_2:70940299-70940318 Msa0619730:CDS 45.0%
TTCCACCACCAGGAAAAGTA+AGG - chr4_2:70940304-70940323 None:intergenic 45.0%
GGTGGAACCCAATTCAAACA+TGG + chr4_2:70940317-70940336 Msa0619730:CDS 45.0%
GAAGCGCACCATGTTTGAAT+TGG - chr4_2:70940328-70940347 None:intergenic 45.0%
AGTCTGTACCTGATATTGCC+TGG + chr4_2:70940799-70940818 Msa0619730:intron 45.0%
GTCTGTACCTGATATTGCCT+GGG + chr4_2:70940800-70940819 Msa0619730:intron 45.0%
TCTGTACCTGATATTGCCTG+GGG + chr4_2:70940801-70940820 Msa0619730:CDS 45.0%
AAAGAGAAAGCCACCAAAGC+TGG - chr4_2:70940868-70940887 None:intergenic 45.0%
TCCTGCTATATCTGCTGTGA+TGG + chr4_2:70940968-70940987 Msa0619730:CDS 45.0%
CCTGCTATATCTGCTGTGAT+GGG + chr4_2:70940969-70940988 Msa0619730:CDS 45.0%
TCTACAGCGTGCACAATGAA+TGG - chr4_2:70941033-70941052 None:intergenic 45.0%
AGAGTTCCGTGGCATATAGA+AGG + chr4_2:70941050-70941069 Msa0619730:CDS 45.0%
TGTAGGTGGCAAACTTCTCT+TGG + chr4_2:70941264-70941283 Msa0619730:intron 45.0%
!! AATAGAGTATTGCGACCTGG+TGG + chr4_2:70941292-70941311 Msa0619730:CDS 45.0%
GACCTGGTGGTTTCTTTGTA+TGG + chr4_2:70941305-70941324 Msa0619730:CDS 45.0%
GACCATACAAAGAAACCACC+AGG - chr4_2:70941310-70941329 None:intergenic 45.0%
TCGGGCAGCTTCTGATAAAT+AGG - chr4_2:70941340-70941359 None:intergenic 45.0%
AGCCTTCATTTCTGTAGACG+GGG - chr4_2:70941456-70941475 None:intergenic 45.0%
GAGCCTTCATTTCTGTAGAC+GGG - chr4_2:70941457-70941476 None:intergenic 45.0%
GAATGTTCCTGCGATGAATG+AGG - chr4_2:70941733-70941752 None:intergenic 45.0%
CAGTTAGTTCGACAGAACGT+GGG + chr4_2:70941780-70941799 Msa0619730:CDS 45.0%
!! GGTGATTTGCTCAGTCTTTC+TGG - chr4_2:70941827-70941846 None:intergenic 45.0%
GACTGAGCAAATCACCTTAC+TGG + chr4_2:70941831-70941850 Msa0619730:CDS 45.0%
GCAGTAAAATCTTCAGGAGC+AGG - chr4_2:70941890-70941909 None:intergenic 45.0%
TGAAACGTTGTTTGTGGCAC+AGG + chr4_2:70942393-70942412 Msa0619730:intron 45.0%
CCTGAGAATCCTATCAACCT+CGG - chr4_2:70942441-70942460 None:intergenic 45.0%
TAATGGTCTCAGCAGTGTCT+CGG - chr4_2:70942484-70942503 None:intergenic 45.0%
AGACACTGCTGAGACCATTA+AGG + chr4_2:70942484-70942503 Msa0619730:CDS 45.0%
! CTTGGTGACATCTATGCAGT+GGG + chr4_2:70942517-70942536 Msa0619730:CDS 45.0%
TATGTGTCCAGAAGTCCATG+TGG + chr4_2:70942579-70942598 Msa0619730:CDS 45.0%
!! GTAACATGGTGCCGTAGTTA+AGG + chr4_2:70942855-70942874 Msa0619730:three_prime_UTR 45.0%
!!! TATTTTTTATTTTTTTTCTT+TGG + chr4_2:70942787-70942806 Msa0619730:three_prime_UTR 5.0%
CAGAGACTAGGAGAGAGTGA+CGG - chr4_2:70938054-70938073 None:intergenic 50.0%
!! GGGCAATGGGTTAAGGGAAA+AGG - chr4_2:70938139-70938158 None:intergenic 50.0%
!! GGAATGGGGCAATGGGTTAA+GGG - chr4_2:70938145-70938164 None:intergenic 50.0%
! TGTGATGGGAATGGGGCAAT+GGG - chr4_2:70938152-70938171 None:intergenic 50.0%
! ATGTGATGGGAATGGGGCAA+TGG - chr4_2:70938153-70938172 None:intergenic 50.0%
TCCGTCGAGTTACTGCTCAA+CGG + chr4_2:70939124-70939143 Msa0619730:CDS 50.0%
ACCGTTGAGCAGTAACTCGA+CGG - chr4_2:70939128-70939147 None:intergenic 50.0%
CTCTATGCTTGGTTGGGCTA+TGG + chr4_2:70939168-70939187 Msa0619730:CDS 50.0%
ACAGAGCGAGGTGAAGAATC+AGG + chr4_2:70939256-70939275 Msa0619730:CDS 50.0%
! ATCCTCCTTGGTAGCTTCCT+CGG - chr4_2:70939339-70939358 None:intergenic 50.0%
GGAGTAGCTCATTAGAACCC+TGG - chr4_2:70939796-70939815 None:intergenic 50.0%
AATGAGCTACTCCCTTCTGG+GGG + chr4_2:70939803-70939822 Msa0619730:CDS 50.0%
!! GCCTTCAAGTTGTCAAGGCA+TGG - chr4_2:70939986-70940005 None:intergenic 50.0%
ATCCTTCAGGAAGAGCGACA+AGG - chr4_2:70940081-70940100 None:intergenic 50.0%
!! CTGCTTTTGGGCCATTCGAT+TGG - chr4_2:70940112-70940131 None:intergenic 50.0%
ATGGCCCAAAAGCAGAGAGA+AGG + chr4_2:70940117-70940136 Msa0619730:CDS 50.0%
!! GGCGAGTACCTTACTTTTCC+TGG + chr4_2:70940293-70940312 Msa0619730:CDS 50.0%
TTGAATTGGGTTCCACCACC+AGG - chr4_2:70940314-70940333 None:intergenic 50.0%
TGTTTGCCCCAGGCAATATC+AGG - chr4_2:70940810-70940829 None:intergenic 50.0%
CCCATCACAGCAGATATAGC+AGG - chr4_2:70940972-70940991 None:intergenic 50.0%
GACCCCGTCTACAGAAATGA+AGG + chr4_2:70941451-70941470 Msa0619730:intron 50.0%
GGAAGTGGTGTCTATCAGCA+GGG + chr4_2:70941496-70941515 Msa0619730:CDS 50.0%
ATGATGATCCTAATGCCGCC+TGG + chr4_2:70941618-70941637 Msa0619730:CDS 50.0%
CCACGTTCTGTCGAACTAAC+TGG - chr4_2:70941782-70941801 None:intergenic 50.0%
CCAGTTAGTTCGACAGAACG+TGG + chr4_2:70941779-70941798 Msa0619730:CDS 50.0%
GTCCAATGTGCGCAATGTCA+TGG + chr4_2:70941973-70941992 Msa0619730:CDS 50.0%
GTCCATGACATTGCGCACAT+TGG - chr4_2:70941978-70941997 None:intergenic 50.0%
CTTCAAAGCTGCTGCAAACC+TGG - chr4_2:70942110-70942129 None:intergenic 50.0%
! CAGGTTTGCAGCAGCTTTGA+AGG + chr4_2:70942108-70942127 Msa0619730:intron 50.0%
! GTTTGAAGCTGTAGTTGCCG+AGG + chr4_2:70942421-70942440 Msa0619730:CDS 50.0%
! CTGTAGTTGCCGAGGTTGAT+AGG + chr4_2:70942429-70942448 Msa0619730:CDS 50.0%
!! CCGAGGTTGATAGGATTCTC+AGG + chr4_2:70942438-70942457 Msa0619730:CDS 50.0%
TGATAGGATTCTCAGGCCTG+AGG + chr4_2:70942445-70942464 Msa0619730:CDS 50.0%
GATAGGATTCTCAGGCCTGA+GGG + chr4_2:70942446-70942465 Msa0619730:CDS 50.0%
CGGACAATAAGCTTTCCCTC+AGG - chr4_2:70942464-70942483 None:intergenic 50.0%
TGCTGAGACCATTAAGGAGC+TGG + chr4_2:70942490-70942509 Msa0619730:CDS 50.0%
CAAGCTCTCCAGCTCCTTAA+TGG - chr4_2:70942501-70942520 None:intergenic 50.0%
CATTAAGGAGCTGGAGAGCT+TGG + chr4_2:70942499-70942518 Msa0619730:CDS 50.0%
! GCTTGGTGACATCTATGCAG+TGG + chr4_2:70942516-70942535 Msa0619730:CDS 50.0%
!! GGGAATGGGGCAATGGGTTA+AGG - chr4_2:70938146-70938165 None:intergenic 55.0%
AAAGCGCGTGAAGCGAGAAG+TGG - chr4_2:70938440-70938459 None:intergenic 55.0%
TGAGGTGAAAGGACAGAGCG+AGG + chr4_2:70939244-70939263 Msa0619730:CDS 55.0%
TAAGAAGGGAGATCTGCCCG+AGG + chr4_2:70939319-70939338 Msa0619730:CDS 55.0%
! TCCTCCTTGGTAGCTTCCTC+GGG - chr4_2:70939338-70939357 None:intergenic 55.0%
CCTGCTTTCCGGGCATAACA+GGG - chr4_2:70939388-70939407 None:intergenic 55.0%
TCCTGCTTTCCGGGCATAAC+AGG - chr4_2:70939389-70939408 None:intergenic 55.0%
GAACCCGGTAGATTGCTTGG+AGG - chr4_2:70939921-70939940 None:intergenic 55.0%
GCATGGAATGTAGTCAGGGC+CGG - chr4_2:70939969-70939988 None:intergenic 55.0%
AGGCAGGTAGGAGGATCTTC+AGG - chr4_2:70940061-70940080 None:intergenic 55.0%
TTCAGGAAGAGCGACAAGGC+AGG - chr4_2:70940077-70940096 None:intergenic 55.0%
TGCCTTGTCGCTCTTCCTGA+AGG + chr4_2:70940076-70940095 Msa0619730:CDS 55.0%
CACACGTGTTTGTTTGCCCC+AGG - chr4_2:70940820-70940839 None:intergenic 55.0%
!! CTGCTGTGATGGGCACAAAG+AGG + chr4_2:70940979-70940998 Msa0619730:CDS 55.0%
GGGAAGTGGTGTCTATCAGC+AGG + chr4_2:70941495-70941514 Msa0619730:CDS 55.0%
CGACAGAACGTGGGTCACAA+TGG + chr4_2:70941789-70941808 Msa0619730:CDS 55.0%
AACGTGGGTCACAATGGCCA+GGG + chr4_2:70941795-70941814 Msa0619730:CDS 55.0%
TGTCGTTCCGGTAGACTCAC+CGG + chr4_2:70942153-70942172 Msa0619730:CDS 55.0%
AGTGTGTCCGGTGAGTCTAC+CGG - chr4_2:70942163-70942182 None:intergenic 55.0%
GGTGACATCTATGCAGTGGG+AGG + chr4_2:70942520-70942539 Msa0619730:CDS 55.0%
GTGTCCAGAAGTCCATGTGG+CGG + chr4_2:70942582-70942601 Msa0619730:CDS 55.0%
CAATTCTGTAGGCCGCCACA+TGG - chr4_2:70942597-70942616 None:intergenic 55.0%
CATGTGGCGGCCTACAGAAT+TGG + chr4_2:70942595-70942614 Msa0619730:CDS 55.0%
TCTGCCCGAGGAAGCTACCA+AGG + chr4_2:70939331-70939350 Msa0619730:CDS 60.0%
CCCTGTTATGCCCGGAAAGC+AGG + chr4_2:70939385-70939404 Msa0619730:CDS 60.0%
AGAGCGACAAGGCAGGTAGG+AGG - chr4_2:70940070-70940089 None:intergenic 60.0%
GGAAGAGCGACAAGGCAGGT+AGG - chr4_2:70940073-70940092 None:intergenic 60.0%
GTGCACGCTGTAGAGTTCCG+TGG + chr4_2:70941039-70941058 Msa0619730:CDS 60.0%
GAACGTGGGTCACAATGGCC+AGG + chr4_2:70941794-70941813 Msa0619730:CDS 60.0%
ACGTGGGTCACAATGGCCAG+GGG + chr4_2:70941796-70941815 Msa0619730:CDS 60.0%
! AGTCTTTCTGGCCACTCCCC+TGG - chr4_2:70941815-70941834 None:intergenic 60.0%
TAGGCCGCCACATGGACTTC+TGG - chr4_2:70942589-70942608 None:intergenic 60.0%
GCCCGAGGAAGCTACCAAGG+AGG + chr4_2:70939334-70939353 Msa0619730:CDS 65.0%
! GCTCTGACTGGCCCCCAGAA+GGG - chr4_2:70939817-70939836 None:intergenic 65.0%
! AGCTCTGACTGGCCCCCAGA+AGG - chr4_2:70939818-70939837 None:intergenic 65.0%
GGATGCGGCGTTGCCAGCTT+TGG + chr4_2:70940852-70940871 Msa0619730:CDS 65.0%
! TGCGGCGTTGCCAGCTTTGG+TGG + chr4_2:70940855-70940874 Msa0619730:CDS 65.0%
GGTCACAATGGCCAGGGGAG+TGG + chr4_2:70941801-70941820 Msa0619730:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 70938035 70943022 70938035 ID=Msa0619730;Name=Msa0619730
chr4_2 mRNA 70938035 70943022 70938035 ID=Msa0619730-mRNA-1;Parent=Msa0619730;Name=Msa0619730-mRNA-1;_AED=0.07;_eAED=0.07;_QI=399|1|1|1|0.87|0.77|9|358|826
chr4_2 exon 70938035 70938388 70938035 ID=Msa0619730-mRNA-1:exon:20826;Parent=Msa0619730-mRNA-1
chr4_2 exon 70939038 70940138 70939038 ID=Msa0619730-mRNA-1:exon:20827;Parent=Msa0619730-mRNA-1
chr4_2 exon 70940221 70940370 70940221 ID=Msa0619730-mRNA-1:exon:20828;Parent=Msa0619730-mRNA-1
chr4_2 exon 70940801 70941071 70940801 ID=Msa0619730-mRNA-1:exon:20829;Parent=Msa0619730-mRNA-1
chr4_2 exon 70941269 70941379 70941269 ID=Msa0619730-mRNA-1:exon:20830;Parent=Msa0619730-mRNA-1
chr4_2 exon 70941465 70941639 70941465 ID=Msa0619730-mRNA-1:exon:20831;Parent=Msa0619730-mRNA-1
chr4_2 exon 70941745 70942017 70941745 ID=Msa0619730-mRNA-1:exon:20832;Parent=Msa0619730-mRNA-1
chr4_2 exon 70942111 70942305 70942111 ID=Msa0619730-mRNA-1:exon:20833;Parent=Msa0619730-mRNA-1
chr4_2 exon 70942415 70943022 70942415 ID=Msa0619730-mRNA-1:exon:20834;Parent=Msa0619730-mRNA-1
chr4_2 five_prime_UTR 70938035 70938388 70938035 ID=Msa0619730-mRNA-1:five_prime_utr;Parent=Msa0619730-mRNA-1
chr4_2 five_prime_UTR 70939038 70939082 70939038 ID=Msa0619730-mRNA-1:five_prime_utr;Parent=Msa0619730-mRNA-1
chr4_2 CDS 70939083 70940138 70939083 ID=Msa0619730-mRNA-1:cds;Parent=Msa0619730-mRNA-1
chr4_2 CDS 70940221 70940370 70940221 ID=Msa0619730-mRNA-1:cds;Parent=Msa0619730-mRNA-1
chr4_2 CDS 70940801 70941071 70940801 ID=Msa0619730-mRNA-1:cds;Parent=Msa0619730-mRNA-1
chr4_2 CDS 70941269 70941379 70941269 ID=Msa0619730-mRNA-1:cds;Parent=Msa0619730-mRNA-1
chr4_2 CDS 70941465 70941639 70941465 ID=Msa0619730-mRNA-1:cds;Parent=Msa0619730-mRNA-1
chr4_2 CDS 70941745 70942017 70941745 ID=Msa0619730-mRNA-1:cds;Parent=Msa0619730-mRNA-1
chr4_2 CDS 70942111 70942305 70942111 ID=Msa0619730-mRNA-1:cds;Parent=Msa0619730-mRNA-1
chr4_2 CDS 70942415 70942664 70942415 ID=Msa0619730-mRNA-1:cds;Parent=Msa0619730-mRNA-1
chr4_2 three_prime_UTR 70942665 70943022 70942665 ID=Msa0619730-mRNA-1:three_prime_utr;Parent=Msa0619730-mRNA-1
Gene Sequence

>Msa0619730

ATGGCACAAGCGAGATATAGTAGAATAGACAATAAACGATCTCCGTCGAGTTACTGCTCAACGGTGACGATTGTTGTGTTTGTTGCTCTATGCTTGGTTGGGCTATGGATGATGACATCGTCTGTAGTTCCGGTGCAAAATGTAGATGAGTCGAATAAAAATGAGGTGAAAGGACAGAGCGAGGTGAAGAATCAGGCAACTGACACCACTAATAGCAATCCTCAGAAGTTTGAAGATAAGAAGGGAGATCTGCCCGAGGAAGCTACCAAGGAGGATAACAATGCTAAGCCGTCCGAAAACAACCCTGTTATGCCCGGAAAGCAGGAAGAGAAATCGGATGAAAAGCCTGAAGATAAGTCTCCTGAAGATACCAAGATGACATATACTGATCCAAATCAGAACAAGAAGACATCTGATTCGGATGAGAGCAATAACAAATCTGGTTCTGATGAGAGCAATAACAAATCTGGTTCTGATGAGGACAACAAGAAGTCCGATTCTGATGAGAGTGAGAAGAAGTCCGATTCTGATGAGAGCGAGAAAAAATCGGATTCAAACGATAATAAATCTGGTTCAGATGCAAGTGAAAATAAAAAGGATGAGTCGAGTGAAACAACAGATAGTAAGACAGAAGAAAAGGCAGATCAAAGTGGTAACCAAGAGTCCGATGAAAGGTCTAATGAGAAGAAAACAGATGAAAATACCAAAAACCAGGGTTCTAATGAGCTACTCCCTTCTGGGGGCCAGTCAGAGCTTCTGAATGAAACTACAACTCAAACTGGATCTTTTTCAACTCAGGCAGCAGAGTCAAAGTCTGAAACCGAGTCTCAAAAATCCTCCAAGCAATCTACCGGGTTCAATTGGAAACTCTGCAATGTCACTGCCGGCCCTGACTACATTCCATGCCTTGACAACTTGAAGGCGATTCGGAACCTTAAAACTACTAAACACTATGAACACAGAGAAAGGCAATGTCCTGAAGATCCTCCTACCTGCCTTGTCGCTCTTCCTGAAGGATATAAACGCCCAATCGAATGGCCCAAAAGCAGAGAGAAGATATGGTATTCCAACGTTCCACACACTAAGCTTGCTGAATACAAGGGGCACCAGAATTGGGTGAAAGTTACAGGCGAGTACCTTACTTTTCCTGGTGGTGGAACCCAATTCAAACATGGTGCGCTTCATTACATTGACACCATACAACAGTCTGTACCTGATATTGCCTGGGGCAAACAAACACGTGTGATATTGGATGTTGGATGCGGCGTTGCCAGCTTTGGTGGCTTTCTCTTTGAAAGAGATGTACTTGCAATGTCATTTGCACCAAAAGATGAACATGAAGCTCAGGTACAATTTGCACTTGAAAGGGGAATTCCTGCTATATCTGCTGTGATGGGCACAAAGAGGCTTCCCTTCCCTGCTAGAGTATTTGATGCCATTCATTGTGCACGCTGTAGAGTTCCGTGGCATATAGAAGGTGGCAAACTTCTCTTGGAGTTGAATAGAGTATTGCGACCTGGTGGTTTCTTTGTATGGTCTGCTACTCCTATTTATCAGAAGCTGCCCGAAGATGTAGAAATATGGAACGAAATGAAGGCTCTAACAAAAGCAATGTGTTGGGAAGTGGTGTCTATCAGCAGGGATAAACTTAATAAAGTTGGTATAGCTGTATACAAGAAGCCAACTTCTAATGAGTGTTATGAGAAACGTTCCAAGAATGAGCCTTCTATATGTCAAGACTATGATGATCCTAATGCCGCCTGGAACATTCCATTGCAAAGTTGCATGCACAAAGCGCCAGTTAGTTCGACAGAACGTGGGTCACAATGGCCAGGGGAGTGGCCAGAAAGACTGAGCAAATCACCTTACTGGTTATCAAATTCTGAAGTTGGAGTTTATGGAAAACCTGCTCCTGAAGATTTTACTGCTGATCATGAACACTGGAAACGTGTAGTGTCCAAGTCTTATCTAAATGGGATTGGCATTCAGTGGTCCAATGTGCGCAATGTCATGGACATGAGATCAGTTTATGGAGGGTTTGCAGCAGCTTTGAAGGATTTGAAAATTTGGGTAATGAATGTCGTTCCGGTAGACTCACCGGACACACTTCCAATTATTTATGAACGTGGTCTGTTTGGCATATATCATGATTGGTGTGAATCATTTAGCACATATCCCAGGTCCTATGATCTACTTCATGCAGATCATCTGTTTTCAAAGCTTAAGAAAAGGTGCAAGTTTGAAGCTGTAGTTGCCGAGGTTGATAGGATTCTCAGGCCTGAGGGAAAGCTTATTGTCCGAGACACTGCTGAGACCATTAAGGAGCTGGAGAGCTTGGTGACATCTATGCAGTGGGAGGTTCGTATGACTTACACTAAAGATTTGCAGGGCATTTTATGTGTCCAGAAGTCCATGTGGCGGCCTACAGAATTGGAGACAGTAGAGTATGCTATTGGCAGCATACCGAATTCGAGACAGTAG
Protein sequence

>Msa0619730

MAQARYSRIDNKRSPSSYCSTVTIVVFVALCLVGLWMMTSSVVPVQNVDESNKNEVKGQSEVKNQATDTTNSNPQKFEDKKGDLPEEATKEDNNAKPSENNPVMPGKQEEKSDEKPEDKSPEDTKMTYTDPNQNKKTSDSDESNNKSGSDESNNKSGSDEDNKKSDSDESEKKSDSDESEKKSDSNDNKSGSDASENKKDESSETTDSKTEEKADQSGNQESDERSNEKKTDENTKNQGSNELLPSGGQSELLNETTTQTGSFSTQAAESKSETESQKSSKQSTGFNWKLCNVTAGPDYIPCLDNLKAIRNLKTTKHYEHRERQCPEDPPTCLVALPEGYKRPIEWPKSREKIWYSNVPHTKLAEYKGHQNWVKVTGEYLTFPGGGTQFKHGALHYIDTIQQSVPDIAWGKQTRVILDVGCGVASFGGFLFERDVLAMSFAPKDEHEAQVQFALERGIPAISAVMGTKRLPFPARVFDAIHCARCRVPWHIEGGKLLLELNRVLRPGGFFVWSATPIYQKLPEDVEIWNEMKALTKAMCWEVVSISRDKLNKVGIAVYKKPTSNECYEKRSKNEPSICQDYDDPNAAWNIPLQSCMHKAPVSSTERGSQWPGEWPERLSKSPYWLSNSEVGVYGKPAPEDFTADHEHWKRVVSKSYLNGIGIQWSNVRNVMDMRSVYGGFAAALKDLKIWVMNVVPVDSPDTLPIIYERGLFGIYHDWCESFSTYPRSYDLLHADHLFSKLKKRCKFEAVVAEVDRILRPEGKLIVRDTAETIKELESLVTSMQWEVRMTYTKDLQGILCVQKSMWRPTELETVEYAIGSIPNSRQ*