AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0267090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0267090 MtrunA17_Chr1g0210321 93.434 198 13 0 1 198 1 198 7.49e-133 389
Msa0267090 MtrunA17_Chr1g0210321 76.863 255 41 4 136 373 243 496 9.40e-116 345
Msa0267090 MtrunA17_Chr1g0180381 59.447 217 84 1 1 213 1 217 2.02e-86 269
Msa0267090 MtrunA17_Chr1g0180381 55.469 128 55 1 175 300 303 430 1.26e-36 138
Msa0267090 MtrunA17_Chr7g0264891 62.088 182 66 2 1 181 1 180 4.52e-77 245
Msa0267090 MtrunA17_Chr7g0264891 66.990 103 34 0 187 289 310 412 1.31e-40 149
Msa0267090 MtrunA17_Chr4g0058051 61.818 165 56 2 35 197 29 188 7.30e-66 214
Msa0267090 MtrunA17_Chr4g0058051 59.596 99 39 1 187 284 302 400 3.04e-28 114
Msa0267090 MtrunA17_Chr6g0458201 64.052 153 52 1 35 187 27 176 2.11e-65 213
Msa0267090 MtrunA17_Chr6g0458201 53.398 103 48 0 187 289 300 402 1.47e-29 117
Msa0267090 MtrunA17_Chr3g0116521 62.329 146 52 1 35 180 29 171 8.86e-61 201
Msa0267090 MtrunA17_Chr3g0116521 57.732 97 41 0 187 283 302 398 1.87e-26 109
Msa0267090 MtrunA17_Chr1g0169731 59.477 153 59 1 35 187 73 222 1.10e-60 202
Msa0267090 MtrunA17_Chr1g0169731 61.386 101 39 0 187 287 346 446 5.66e-30 119
Msa0267090 MtrunA17_Chr4g0060211 49.733 187 88 2 33 213 50 236 2.45e-55 187
Msa0267090 MtrunA17_Chr4g0060211 50.515 97 46 1 187 283 332 426 1.84e-22 98.2
Msa0267090 MtrunA17_Chr7g0237761 55.556 153 65 1 35 187 67 216 5.60e-55 187
Msa0267090 MtrunA17_Chr7g0237761 62.376 101 38 0 187 287 340 440 3.12e-30 120
Msa0267090 MtrunA17_Chr3g0123331 56.291 151 63 2 30 180 23 170 3.32e-52 178
Msa0267090 MtrunA17_Chr3g0123331 51.020 98 47 1 187 283 301 398 1.11e-26 109
Msa0267090 MtrunA17_Chr3g0123321 55.862 145 58 2 35 179 29 167 1.55e-51 176
Msa0267090 MtrunA17_Chr3g0123321 57.895 95 40 0 187 281 299 393 5.15e-23 99.4
Msa0267090 MtrunA17_Chr6g0452861 46.354 192 92 3 33 213 61 252 1.45e-50 175
Msa0267090 MtrunA17_Chr6g0452861 44.762 105 53 2 187 286 348 452 2.41e-20 92.0
Msa0267090 MtrunA17_Chr5g0416061 59.259 135 55 0 52 186 85 219 2.27e-49 172
Msa0267090 MtrunA17_Chr5g0416061 42.105 95 54 1 187 280 344 438 3.16e-19 89.0
Msa0267090 MtrunA17_Chr8g0362561 59.690 129 52 0 58 186 90 218 3.57e-48 169
Msa0267090 MtrunA17_Chr8g0362561 44.660 103 49 2 187 281 343 445 8.74e-21 93.6
Msa0267090 MtrunA17_Chr4g0075231 62.500 120 44 1 67 186 39 157 1.61e-46 163
Msa0267090 MtrunA17_Chr4g0075231 44.792 96 50 2 187 281 282 375 2.80e-18 85.5
Msa0267090 MtrunA17_Chr2g0288921 60.800 125 48 1 62 186 58 181 7.15e-45 159
Msa0267090 MtrunA17_Chr2g0288921 46.875 96 48 2 187 281 306 399 6.31e-19 87.4
Msa0267090 MtrunA17_Chr5g0416041 55.975 159 65 2 33 186 61 219 5.28e-44 157
Msa0267090 MtrunA17_Chr5g0416041 42.708 96 54 1 187 281 344 439 1.71e-20 92.4
Msa0267090 MtrunA17_Chr7g0216581 46.243 173 75 2 33 187 50 222 1.60e-39 145
Msa0267090 MtrunA17_Chr7g0216581 45.918 98 52 1 187 283 346 443 8.14e-20 90.5
Msa0267090 MtrunA17_Chr8g0373761 37.241 145 85 4 48 187 21 164 1.63e-23 100
Msa0267090 MtrunA17_Chr8g0373721 39.024 123 71 3 67 186 42 163 2.23e-23 100
Msa0267090 MtrunA17_Chr3g0089181 36.879 141 79 4 49 186 11 144 2.64e-23 99.8
Msa0267090 MtrunA17_Chr5g0403481 42.975 121 63 4 64 180 38 156 4.70e-22 96.7
Msa0267090 MtrunA17_Chr5g0403461 42.975 121 63 4 64 180 38 156 4.70e-22 96.7
Msa0267090 MtrunA17_Chr5g0403491 42.975 121 63 4 64 180 38 156 4.70e-22 96.7
Msa0267090 MtrunA17_Chr5g0414541 43.103 116 60 4 64 175 38 151 1.81e-21 94.7
Msa0267090 MtrunA17_Chr8g0373701 37.398 123 73 3 67 186 97 218 1.88e-21 95.5
Msa0267090 MtrunA17_Chr5g0403391 41.322 121 65 4 64 180 38 156 3.10e-21 94.4
Msa0267090 MtrunA17_Chr8g0373731 39.316 117 67 3 67 180 42 157 3.68e-21 94.0
Msa0267090 MtrunA17_Chr5g0403411 40.000 120 66 4 64 179 38 155 4.02e-20 90.9
Msa0267090 MtrunA17_Chr2g0288901 46.465 99 48 4 187 284 55 149 2.22e-18 81.3
Msa0267090 MtrunA17_Chr1g0212931 42.202 109 57 2 81 189 10 112 3.05e-18 84.7
Msa0267090 MtrunA17_Chr1g0182021 44.340 106 53 2 84 189 62 161 1.15e-13 71.6
Msa0267090 MtrunA17_Chr4g0031851 40.964 83 47 2 106 187 28 109 2.63e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0267090 AT5G04310.3 63.636 198 56 2 6 187 18 215 4.56e-80 253
Msa0267090 AT5G04310.3 80.000 100 20 0 188 287 340 439 4.70e-50 175
Msa0267090 AT5G04310.1 63.636 198 56 2 6 187 18 215 2.23e-79 253
Msa0267090 AT5G04310.1 62.048 166 58 3 188 348 340 505 1.08e-52 182
Msa0267090 AT5G04310.2 63.636 198 56 2 6 187 18 215 2.23e-79 253
Msa0267090 AT5G04310.2 62.048 166 58 3 188 348 340 505 1.08e-52 182
Msa0267090 AT3G53190.1 60.215 186 66 4 1 179 2 186 6.62e-70 227
Msa0267090 AT3G53190.1 51.744 172 68 5 187 358 318 474 1.50e-41 152
Msa0267090 AT3G54920.1 59.770 174 59 2 25 187 27 200 8.16e-70 227
Msa0267090 AT3G54920.1 72.816 103 27 1 188 289 316 418 1.90e-44 160
Msa0267090 AT5G63180.1 53.571 196 79 2 2 197 29 212 5.32e-67 218
Msa0267090 AT5G63180.1 54.369 103 45 1 187 287 326 428 8.96e-27 110
Msa0267090 AT1G67750.1 63.871 155 49 2 35 187 33 182 2.40e-65 213
Msa0267090 AT1G67750.1 54.639 97 44 0 187 283 304 400 1.31e-23 101
Msa0267090 AT4G24780.2 54.190 179 76 2 2 180 1 173 6.84e-63 207
Msa0267090 AT4G24780.2 57.732 97 41 0 187 283 304 400 2.68e-25 106
Msa0267090 AT4G24780.1 54.190 179 76 2 2 180 1 173 6.84e-63 207
Msa0267090 AT4G24780.1 57.732 97 41 0 187 283 304 400 2.68e-25 106
Msa0267090 AT3G07010.1 51.852 189 82 4 1 187 7 188 1.30e-60 201
Msa0267090 AT3G07010.1 60.825 97 38 0 187 283 312 408 1.12e-29 118
Msa0267090 AT1G04680.1 50.490 204 79 7 1 187 3 201 1.39e-60 201
Msa0267090 AT1G04680.1 61.856 97 37 0 187 283 325 421 1.48e-30 121
Msa0267090 AT3G07010.2 59.028 144 56 1 44 187 15 155 9.41e-59 195
Msa0267090 AT3G07010.2 60.825 97 38 0 187 283 279 375 6.87e-30 119
Msa0267090 AT4G13710.1 57.143 154 65 1 35 187 89 242 1.94e-58 197
Msa0267090 AT4G13710.1 62.245 98 37 0 187 284 366 463 7.64e-36 136
Msa0267090 AT4G13710.2 57.143 154 65 1 35 187 70 223 2.06e-58 196
Msa0267090 AT4G13710.2 62.245 98 37 0 187 284 347 444 7.45e-36 136
Msa0267090 AT3G24670.1 57.325 157 64 1 30 186 58 211 6.96e-58 194
Msa0267090 AT3G24670.1 59.794 97 39 0 187 283 336 432 6.57e-27 111
Msa0267090 AT3G24230.1 51.872 187 77 4 35 213 71 252 7.15e-55 187
Msa0267090 AT3G24230.1 56.436 101 43 1 187 287 348 447 7.92e-31 122
Msa0267090 AT4G13210.1 55.263 152 64 2 30 179 16 165 2.62e-53 181
Msa0267090 AT4G13210.1 61.856 97 37 0 187 283 297 393 5.51e-29 116
Msa0267090 AT4G13210.2 55.263 152 64 2 30 179 53 202 2.72e-53 182
Msa0267090 AT4G13210.2 61.856 97 37 0 187 283 334 430 8.08e-29 116
Msa0267090 AT5G48900.1 49.123 171 82 2 12 180 15 182 2.97e-53 182
Msa0267090 AT5G48900.1 57.732 97 41 0 187 283 313 409 4.66e-25 105
Msa0267090 AT3G27400.1 51.190 168 77 3 12 179 14 176 2.33e-52 179
Msa0267090 AT3G27400.1 48.515 101 52 0 187 287 308 408 1.84e-25 107
Msa0267090 AT1G14420.1 51.462 171 67 2 33 187 55 225 2.38e-52 181
Msa0267090 AT1G14420.1 47.115 104 49 1 187 284 349 452 8.92e-24 102
Msa0267090 AT3G27400.2 51.190 168 77 3 12 179 18 180 2.69e-52 179
Msa0267090 AT3G27400.2 48.515 101 52 0 187 287 312 412 1.86e-25 107
Msa0267090 AT5G55720.1 58.197 122 51 0 66 187 48 169 2.68e-48 168
Msa0267090 AT5G55720.1 51.429 105 48 2 182 283 280 384 3.96e-23 100
Msa0267090 AT2G02720.1 48.588 177 75 2 27 187 45 221 6.14e-48 169
Msa0267090 AT2G02720.1 43.269 104 53 1 187 284 345 448 2.58e-20 92.4
Msa0267090 AT1G11920.1 61.789 123 46 1 64 186 34 155 9.35e-48 166
Msa0267090 AT1G11920.1 46.316 95 49 2 188 281 281 374 9.89e-20 90.1
Msa0267090 AT3G01270.1 50.314 159 77 1 57 213 115 273 1.76e-46 165
Msa0267090 AT3G01270.1 42.424 99 55 2 187 283 369 467 7.10e-20 91.3
Msa0267090 AT5G15110.1 49.057 159 79 1 57 213 112 270 5.54e-46 164
Msa0267090 AT5G15110.1 45.098 102 48 3 187 283 366 464 4.30e-21 94.7
Msa0267090 AT1G30350.1 55.000 120 53 1 67 186 36 154 1.51e-41 149
Msa0267090 AT1G30350.1 40.426 94 55 1 188 281 266 358 2.04e-14 74.3
Msa0267090 AT4G22080.1 55.833 120 52 1 67 186 47 165 8.58e-41 148
Msa0267090 AT4G22080.1 44.860 107 55 3 188 293 291 394 1.34e-16 80.9
Msa0267090 AT4G22090.1 43.784 185 77 5 4 186 6 165 1.81e-40 147
Msa0267090 AT4G22090.1 43.925 107 56 3 188 293 291 394 1.99e-15 77.4
Msa0267090 AT3G55140.1 45.283 106 52 2 84 189 14 113 6.34e-19 87.0
Msa0267090 AT3G09540.2 47.170 106 50 2 84 189 61 160 5.88e-17 80.9
Msa0267090 AT3G09540.1 47.170 106 50 2 84 189 61 160 7.79e-17 81.6
Msa0267090 AT3G09540.3 47.170 106 50 2 84 189 61 160 8.16e-17 81.6
Msa0267090 AT5G09280.1 45.455 88 46 2 100 186 6 92 4.78e-15 75.5
Msa0267090 AT3G55140.2 49.275 69 34 1 121 189 22 89 2.17e-12 67.8

Find 149 sgRNAs with CRISPR-Local

Find 474 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATTTGCTCCGCGGATTT+TGG 0.170833 2_2:-68447255 None:intergenic
AATGACGATGGGGACTTCTT+TGG 0.240587 2_2:+68451598 Msa0267090:CDS
GTTCCTGGAACTGGATTTGC+TGG 0.280233 2_2:-68446274 None:intergenic
AAATTAGCGGATTGCGGAAT+TGG 0.301743 2_2:+68446181 Msa0267090:CDS
GCGGATTGCGGAATTGGTTT+TGG 0.302604 2_2:+68446187 Msa0267090:CDS
GACGGTTTGCGGACCAGTTT+GGG 0.311644 2_2:-68446156 None:intergenic
TGAGAGGTGTTGTTGTTGTT+GGG 0.318303 2_2:-68445765 None:intergenic
CGCTAATTTCTGACGGTTTG+CGG 0.321400 2_2:-68446167 None:intergenic
GCAATCGTCTACCGGGTTTC+CGG 0.325899 2_2:-68446122 None:intergenic
AGACGAACCTCTTTAGCATT+TGG 0.329352 2_2:-68446940 None:intergenic
TACTATGATGATCTCACAAT+TGG 0.332704 2_2:+68451761 Msa0267090:exon
GAAGGGGATATAATGGTAAA+TGG 0.334776 2_2:+68447168 Msa0267090:CDS
AGTTCGTGAACCACAGCTTC+AGG 0.341841 2_2:-68445940 None:intergenic
GTGAGAGGTGTTGTTGTTGT+TGG 0.346680 2_2:-68445766 None:intergenic
ATGACGATGGGGACTTCTTT+GGG 0.346686 2_2:+68451599 Msa0267090:CDS
TGACGGTTTGCGGACCAGTT+TGG 0.355210 2_2:-68446157 None:intergenic
GAATTATTGAGCAGGGATAA+TGG 0.357438 2_2:+68451493 Msa0267090:intron
GACCAAGGCAATTGTTTAAC+CGG 0.363053 2_2:+68446103 Msa0267090:CDS
ACGGCGTGACGGAGTGTTCC+TGG 0.372447 2_2:-68446289 None:intergenic
ATGAATGGAGTGGTTGGAAT+TGG 0.374993 2_2:+68447139 Msa0267090:CDS
GAAGTCCCCATCGTCATTGC+TGG 0.388593 2_2:-68451593 None:intergenic
TCGCGGTGCTGCTTGGCTGC+TGG 0.393434 2_2:-68451638 None:intergenic
AGGGTGCTCGCGGTGCTGCT+TGG 0.403594 2_2:-68451645 None:intergenic
TGACGGAGTGTTCCTGGAAC+TGG 0.403848 2_2:-68446283 None:intergenic
TTATCACGTTTGAGATGTAT+TGG 0.404588 2_2:-68446453 None:intergenic
TTCTTTGTACCGTCAGGGGT+GGG 0.410262 2_2:+68447195 Msa0267090:CDS
GCTGGCGATGCGACCCAAAC+TGG 0.410954 2_2:+68446143 Msa0267090:CDS
ATGGGTAAGTAAGCAAGTTA+AGG 0.418760 2_2:-68445732 None:intergenic
GTTAAGGAAGAAGGGGTTGA+GGG 0.419314 2_2:-68445716 None:intergenic
GAAACCCGGTAGACGATTGC+TGG 0.420048 2_2:+68446125 Msa0267090:CDS
CAAGGGTTACAATGGGAATG+GGG 0.421820 2_2:+68451567 Msa0267090:CDS
GGAGCATTCTTTGTACCGTC+AGG 0.427296 2_2:+68447189 Msa0267090:CDS
GTAAGCAAGTTAAGGAAGAA+GGG 0.428039 2_2:-68445724 None:intergenic
ATTAAAAGAATGCAGCTCAT+AGG 0.428979 2_2:-68445844 None:intergenic
AGTAAGCAAGTTAAGGAAGA+AGG 0.429697 2_2:-68445725 None:intergenic
ACCATGTACTCTGGTGTATT+CGG 0.434723 2_2:+68447285 Msa0267090:CDS
TGGATTTGCTGGGTCGTTGT+CGG 0.436703 2_2:-68446263 None:intergenic
AGTTAAGGAAGAAGGGGTTG+AGG 0.436769 2_2:-68445717 None:intergenic
GAGGACGGAAGGGGATATAA+TGG 0.441518 2_2:+68447161 Msa0267090:CDS
TCTTCAATGCACAACAACTT+AGG 0.443195 2_2:-68445627 None:intergenic
GACCCAGCAAATCCAGTTCC+AGG 0.444172 2_2:+68446271 Msa0267090:CDS
TTGGTGGGGTAAGGTGAGGT+TGG 0.444612 2_2:-68445908 None:intergenic
ACTATGATGATCTCACAATT+GGG 0.445655 2_2:+68451762 Msa0267090:exon
CGCGCCGCCATGGGAGGTAA+AGG 0.452207 2_2:+68446211 Msa0267090:CDS
GTAAGGATGTTGGTGGGGTA+AGG 0.452310 2_2:-68445917 None:intergenic
CATCGCCAGCAATCGTCTAC+CGG 0.455027 2_2:-68446130 None:intergenic
TTACCCTGACTGTTAATAGT+AGG 0.455282 2_2:-68446895 None:intergenic
TAATCCTACTATTAACAGTC+AGG 0.457298 2_2:+68446891 Msa0267090:CDS
CCCATTGTAACCCTTGCTGT+TGG 0.468036 2_2:-68451560 None:intergenic
AAGGGTTACAATGGGAATGG+GGG 0.475311 2_2:+68451568 Msa0267090:CDS
GATAATGGAGATATATATCC+CGG 0.478536 2_2:+68451508 Msa0267090:CDS
AACGGTGGTGGGACCACGAC+AGG 0.479684 2_2:+68451535 Msa0267090:CDS
GGTTGGAATTGGAGGACGGA+AGG 0.480151 2_2:+68447150 Msa0267090:CDS
GCAAGGGTTACAATGGGAAT+GGG 0.483203 2_2:+68451566 Msa0267090:CDS
TGGATACAAATGATAATGAA+TGG 0.489364 2_2:+68447124 Msa0267090:CDS
TGAACCACAGCTTCAGGGTA+AGG 0.490310 2_2:-68445934 None:intergenic
TTCCGGTTAAACAATTGCCT+TGG 0.492172 2_2:-68446105 None:intergenic
ATGATAATGAATGGAGTGGT+TGG 0.493562 2_2:+68447133 Msa0267090:CDS
TCTTTGTACCGTCAGGGGTG+GGG 0.494905 2_2:+68447196 Msa0267090:CDS
TTGGAATTGGAGGACGGAAG+GGG 0.495602 2_2:+68447152 Msa0267090:CDS
GAGAGGTGTTGTTGTTGTTG+GGG 0.497687 2_2:-68445764 None:intergenic
GGTCCCACCACCGTTGAACC+CGG 0.506993 2_2:-68451527 None:intergenic
AAATACAATTGATGATGAGT+AGG 0.507834 2_2:-68451665 None:intergenic
TACAAAACCGTCGACGGCCG+CGG 0.508128 2_2:+68446391 Msa0267090:CDS
TTCCGATCCAAATGCTAAAG+AGG 0.508833 2_2:+68446933 Msa0267090:CDS
AGCAAGGGTTACAATGGGAA+TGG 0.513689 2_2:+68451565 Msa0267090:CDS
GAGTGTGATGCAACCGTGGC+CGG 0.515352 2_2:-68446431 None:intergenic
ATTCTTTGTACCGTCAGGGG+TGG 0.517273 2_2:+68447194 Msa0267090:CDS
ATTTGCGCCGCGGCCGTCGA+CGG 0.518041 2_2:-68446398 None:intergenic
TGCACAACAACTTAGGAAGC+TGG 0.518282 2_2:-68445620 None:intergenic
AATGGAGTGGTTGGAATTGG+AGG 0.522305 2_2:+68447142 Msa0267090:CDS
TGATAATAGAATATCATAGT+TGG 0.522598 2_2:-68451737 None:intergenic
GGCGCAAATGTTCAAATCAC+CGG 0.523686 2_2:+68446412 Msa0267090:CDS
TCTTTAGCATTTGGATCGGA+AGG 0.525976 2_2:-68446931 None:intergenic
GATATATATCCCGGGTTCAA+CGG 0.530636 2_2:+68451517 Msa0267090:CDS
CACCAGAGTACATGGTAAGC+TGG 0.533022 2_2:-68447278 None:intergenic
GTTGGAATTGGAGGACGGAA+GGG 0.533218 2_2:+68447151 Msa0267090:CDS
CTTGCTGTTGGCTCCTGTCG+TGG 0.533400 2_2:-68451548 None:intergenic
CGCAATCCGCTAATTTCTGA+CGG 0.535146 2_2:-68446174 None:intergenic
TTAAGGAAGAAGGGGTTGAG+GGG 0.535427 2_2:-68445715 None:intergenic
TTCTTTGGGATGATATTCAA+AGG 0.538599 2_2:+68451613 Msa0267090:CDS
TATCCCGGGTTCAACGGTGG+TGG 0.538874 2_2:+68451523 Msa0267090:CDS
AGGGTTACAATGGGAATGGG+GGG 0.539386 2_2:+68451569 Msa0267090:CDS
GAGGTTTATTGTCATTGAAG+AGG 0.539582 2_2:-68446344 None:intergenic
GCCAACAGCAAGGGTTACAA+TGG 0.540333 2_2:+68451559 Msa0267090:CDS
GAGATAAGAAAGAGCACAAG+AGG 0.541289 2_2:-68445870 None:intergenic
CAATTGTTTAACCGGAAACC+CGG 0.544194 2_2:+68446111 Msa0267090:CDS
GTTCGTGAACCACAGCTTCA+GGG 0.545323 2_2:-68445939 None:intergenic
CTGGTGTATTCGGTGATCCC+AGG 0.546191 2_2:+68447295 Msa0267090:CDS
TAAGTTGTTGTGCATTGAAG+AGG 0.547126 2_2:+68445629 Msa0267090:five_prime_UTR
TAAGCAAGTTAAGGAAGAAG+GGG 0.549197 2_2:-68445723 None:intergenic
TTTGGTCGCGCCGCCATGGG+AGG 0.551573 2_2:+68446205 Msa0267090:CDS
ATCGCCAGCAATCGTCTACC+GGG 0.553121 2_2:-68446129 None:intergenic
CTGACCTCCTTTACCTCCCA+TGG 0.554855 2_2:-68446218 None:intergenic
GAGCATTCTTTGTACCGTCA+GGG 0.555948 2_2:+68447190 Msa0267090:CDS
ACCGAATACACCAGAGTACA+TGG 0.557818 2_2:-68447286 None:intergenic
TTCAGGGTAAGGATGTTGGT+GGG 0.561844 2_2:-68445923 None:intergenic
AATTCTTACAAAACCGTCGA+CGG 0.563410 2_2:+68446385 Msa0267090:CDS
CAGCTTCAGGGTAAGGATGT+TGG 0.564738 2_2:-68445927 None:intergenic
AATACAATTGATGATGAGTA+GGG 0.567604 2_2:-68451664 None:intergenic
TTCCTGGAACTGGATTTGCT+GGG 0.567740 2_2:-68446273 None:intergenic
GAGTGGTTCGTCTTGAATCA+CGG 0.568199 2_2:-68446308 None:intergenic
TGATTCAAGACGAACCACTC+TGG 0.570543 2_2:+68446311 Msa0267090:CDS
CCAACAGCAAGGGTTACAAT+GGG 0.571803 2_2:+68451560 Msa0267090:CDS
AACCAGCTTACCATGTACTC+TGG 0.574293 2_2:+68447276 Msa0267090:CDS
AGTGATGAACATGGATATTG+TGG 0.574584 2_2:-68446477 None:intergenic
AACCTCTTTAGCATTTGGAT+CGG 0.577413 2_2:-68446935 None:intergenic
TGATGATCTCACAATTGGGG+TGG 0.578180 2_2:+68451766 Msa0267090:exon
GAGTGGTTGGAATTGGAGGA+CGG 0.578221 2_2:+68447146 Msa0267090:CDS
CAGTGGGAAATGTATGCTAT+CGG 0.579655 2_2:+68446859 Msa0267090:intron
AGAGGTGTTGTTGTTGTTGG+GGG 0.583902 2_2:-68445763 None:intergenic
CTTCAGGGTAAGGATGTTGG+TGG 0.587281 2_2:-68445924 None:intergenic
GATGATCTCACAATTGGGGT+GGG 0.588528 2_2:+68451767 Msa0267090:exon
GGGGATGAGTGCTCAGTATG+CGG 0.590141 2_2:+68447215 Msa0267090:CDS
GTCCCACCACCGTTGAACCC+GGG 0.593981 2_2:-68451526 None:intergenic
GATCGGAAGGAGCTGTGTAA+CGG 0.594179 2_2:-68446918 None:intergenic
ATTTGCTGGGTCGTTGTCGG+AGG 0.596182 2_2:-68446260 None:intergenic
GCACTCATCCCCACCCCTGA+CGG 0.600409 2_2:-68447204 None:intergenic
AATGTTCAAATCACCGGCCA+CGG 0.603117 2_2:+68446418 Msa0267090:CDS
GCCGCCATGGGAGGTAAAGG+AGG 0.603203 2_2:+68446214 Msa0267090:CDS
ATCCCGGGTTCAACGGTGGT+GGG 0.607721 2_2:+68451524 Msa0267090:CDS
AGCATTCTTTGTACCGTCAG+GGG 0.608432 2_2:+68447191 Msa0267090:CDS
CGTCAGAAATTAGCGGATTG+CGG 0.614147 2_2:+68446175 Msa0267090:CDS
CGTCTTGAATCACGGCGTGA+CGG 0.617300 2_2:-68446300 None:intergenic
CACGACAGGAGCCAACAGCA+AGG 0.620533 2_2:+68451549 Msa0267090:CDS
ACATCCTTACCCTGAAGCTG+TGG 0.625686 2_2:+68445930 Msa0267090:CDS
TGAAGATGAGTTCATGACGG+AGG 0.630356 2_2:-68446363 None:intergenic
ATAATAATGACTTGTGTGAG+AGG 0.633787 2_2:-68445781 None:intergenic
GATGTTGGTGGGGTAAGGTG+AGG 0.633904 2_2:-68445912 None:intergenic
CTATGATGATCTCACAATTG+GGG 0.634323 2_2:+68451763 Msa0267090:exon
TCAGGGTAAGGATGTTGGTG+GGG 0.638203 2_2:-68445922 None:intergenic
GGGGTCCAGCAATGACGATG+GGG 0.639197 2_2:+68451588 Msa0267090:CDS
GATGAGTGCTCAGTATGCGG+AGG 0.641480 2_2:+68447218 Msa0267090:CDS
AATCCTACTATTAACAGTCA+GGG 0.652401 2_2:+68446892 Msa0267090:CDS
ACGACAGGAGCCAACAGCAA+GGG 0.655554 2_2:+68451550 Msa0267090:CDS
ATAATGGAGATATATATCCC+GGG 0.660215 2_2:+68451509 Msa0267090:CDS
TGATTTGAACATTTGCGCCG+CGG 0.665434 2_2:-68446408 None:intergenic
AATTGAAGATGAGTTCATGA+CGG 0.666509 2_2:-68446366 None:intergenic
ACAAATGATAATGAATGGAG+TGG 0.669476 2_2:+68447129 Msa0267090:CDS
GAACTGCTCTCAAAAGACCA+AGG 0.670634 2_2:+68446088 Msa0267090:CDS
GAGGAGAAGATTATCCAGAG+TGG 0.673042 2_2:-68446325 None:intergenic
CGCAAACCGTCAGAAATTAG+CGG 0.675608 2_2:+68446168 Msa0267090:CDS
TGGGAAATGTATGCTATCGG+AGG 0.682262 2_2:+68446862 Msa0267090:CDS
ATATATCCCGGGTTCAACGG+TGG 0.685525 2_2:+68451520 Msa0267090:CDS
GATGATGAGTAGGGTGCTCG+CGG 0.691068 2_2:-68451655 None:intergenic
ACCTCCTTTACCTCCCATGG+CGG 0.692724 2_2:-68446215 None:intergenic
AAGCTGGTTAATTTGCTCCG+CGG 0.697685 2_2:-68447262 None:intergenic
AAGTGTACAGCCAAAATCCG+CGG 0.698539 2_2:+68447245 Msa0267090:CDS
ATTGGAGTGTGATGCAACCG+TGG 0.724281 2_2:-68446435 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAATCATGTTAATAT+AGG + chr2_2:68447398-68447417 Msa0267090:intron 10.0%
!! AAATAAAAAATGGAAAATTA+AGG + chr2_2:68448307-68448326 Msa0267090:intron 10.0%
!!! TATTTTTCTTTGTAAAATTA+TGG - chr2_2:68450153-68450172 None:intergenic 10.0%
!!! ATAATTTTACAAAGAAAAAT+AGG + chr2_2:68450152-68450171 Msa0267090:intron 10.0%
!! TACAAAATAAATTTAGATTA+GGG - chr2_2:68451210-68451229 None:intergenic 10.0%
!! ATACAAAATAAATTTAGATT+AGG - chr2_2:68451211-68451230 None:intergenic 10.0%
!!! TCTTTTAATTATTTTCAATT+TGG + chr2_2:68451705-68451724 Msa0267090:CDS 10.0%
!! CTACTAAATTACTTAAAAAT+TGG - chr2_2:68447865-68447884 None:intergenic 15.0%
!!! ATTTATAGCATTTTAATTGA+AGG + chr2_2:68448202-68448221 Msa0267090:intron 15.0%
!!! TTTATAGCATTTTAATTGAA+GGG + chr2_2:68448203-68448222 Msa0267090:intron 15.0%
!! GTTAAAGACAAAATAAAAAA+TGG + chr2_2:68448297-68448316 Msa0267090:intron 15.0%
!!! AATAATTTTTGAGCTAATAA+CGG - chr2_2:68448935-68448954 None:intergenic 15.0%
!!! TTTTTAGAAGAAATTAATGA+CGG + chr2_2:68449077-68449096 Msa0267090:intron 15.0%
!! AAATATGTTTATGTTATGAA+AGG - chr2_2:68450047-68450066 None:intergenic 15.0%
!!! ATAGTTTGAAATTTTATAGA+GGG - chr2_2:68450695-68450714 None:intergenic 15.0%
!!! TATAGTTTGAAATTTTATAG+AGG - chr2_2:68450696-68450715 None:intergenic 15.0%
!! TTTGTATAAAGAAAAAAAGT+AGG + chr2_2:68451224-68451243 Msa0267090:intron 15.0%
!!! ACAATTTCGAATAATCATTT+TGG + chr2_2:68446676-68446695 Msa0267090:intron 20.0%
!! TATTGAAAAATGTAATACCT+GGG - chr2_2:68447315-68447334 None:intergenic 20.0%
!! ATATTGAAAAATGTAATACC+TGG - chr2_2:68447316-68447335 None:intergenic 20.0%
!! ATTAATCATGTTAATATAGG+AGG + chr2_2:68447401-68447420 Msa0267090:intron 20.0%
!!! AAAGATTACTATAGTCTTTT+TGG + chr2_2:68447521-68447540 Msa0267090:intron 20.0%
!!! AGAGATAAAATAAAAAGTGT+AGG - chr2_2:68447581-68447600 None:intergenic 20.0%
!! AATAAAATGAAAAACACACA+TGG + chr2_2:68447603-68447622 Msa0267090:intron 20.0%
!! TGGTAAAATTATTGTAATGA+TGG + chr2_2:68447811-68447830 Msa0267090:intron 20.0%
!!! ATAAAACCCTTTTTTTATGT+GGG + chr2_2:68448027-68448046 Msa0267090:intron 20.0%
!! GAAAATTAAGGAATTAAAAG+AGG + chr2_2:68448319-68448338 Msa0267090:intron 20.0%
!!! TAAAAGAGGTAAGTTTTTAT+AGG + chr2_2:68448333-68448352 Msa0267090:intron 20.0%
!!! TTCTTTAAGTTGTATTTTGA+AGG + chr2_2:68448382-68448401 Msa0267090:intron 20.0%
!! AACAGTTATAAAAGTTGAAA+TGG + chr2_2:68448463-68448482 Msa0267090:intron 20.0%
!! ACAGTTATAAAAGTTGAAAT+GGG + chr2_2:68448464-68448483 Msa0267090:intron 20.0%
!!! GTTATTTTTTAAACAAGTCA+AGG + chr2_2:68448491-68448510 Msa0267090:intron 20.0%
!! TTGTAAAAAGTTGAATTGTT+TGG + chr2_2:68448582-68448601 Msa0267090:intron 20.0%
!!! AATTGTTTGGTTAAAAGTAT+CGG + chr2_2:68448595-68448614 Msa0267090:intron 20.0%
!!! TCATTTTTCAAAAGAAATAG+AGG + chr2_2:68449013-68449032 Msa0267090:intron 20.0%
!! TAGATACAAAAAGTTAAAAC+TGG - chr2_2:68449109-68449128 None:intergenic 20.0%
!!! ATGACGTTACAAATTAATTT+TGG + chr2_2:68449185-68449204 Msa0267090:intron 20.0%
!! TATAGACAATATAGAAAAAG+AGG + chr2_2:68449355-68449374 Msa0267090:intron 20.0%
!! ACAACAAAAAAGAAGATAAA+AGG + chr2_2:68449403-68449422 Msa0267090:intron 20.0%
!! ATTTAGACATCTTAAATAAG+TGG + chr2_2:68449664-68449683 Msa0267090:intron 20.0%
!! CATCTATAATCTATAACATA+TGG + chr2_2:68449780-68449799 Msa0267090:intron 20.0%
!! TTACAAAGAAAAATAGGTAT+TGG + chr2_2:68450158-68450177 Msa0267090:intron 20.0%
!! TACAAAGAAAAATAGGTATT+GGG + chr2_2:68450159-68450178 Msa0267090:intron 20.0%
!!! TAGTTTGAAATTTTATAGAG+GGG - chr2_2:68450694-68450713 None:intergenic 20.0%
!! TGACTAGATTCAATAAATTT+AGG - chr2_2:68450754-68450773 None:intergenic 20.0%
!!! TTCTTAGCTATTAAAGTATT+TGG + chr2_2:68450995-68451014 Msa0267090:intron 20.0%
!! AAAATAAATTTAGATTAGGG+AGG - chr2_2:68451207-68451226 None:intergenic 20.0%
!! ATAACAATAGCAAGAAAAAA+TGG - chr2_2:68451381-68451400 None:intergenic 20.0%
!! TGATAATAGAATATCATAGT+TGG - chr2_2:68451740-68451759 None:intergenic 20.0%
!! ATACCAAAAAAGTTATCAAA+GGG + chr2_2:68451805-68451824 Msa0267090:three_prime_UTR 20.0%
!! TTAACAATGATTTTACACAG+TGG + chr2_2:68446842-68446861 Msa0267090:intron 25.0%
!! TAACAATGATTTTACACAGT+GGG + chr2_2:68446843-68446862 Msa0267090:intron 25.0%
!! TGGATACAAATGATAATGAA+TGG + chr2_2:68447124-68447143 Msa0267090:CDS 25.0%
!! GTGCTAAATCTAACTTTTTA+TGG + chr2_2:68447791-68447810 Msa0267090:intron 25.0%
! AAGTAATTTAGTAGTGAATC+AGG + chr2_2:68447871-68447890 Msa0267090:intron 25.0%
! AGTAATTTAGTAGTGAATCA+GGG + chr2_2:68447872-68447891 Msa0267090:intron 25.0%
!!! GATAAAACCCTTTTTTTATG+TGG + chr2_2:68448026-68448045 Msa0267090:intron 25.0%
!!! TAAAACCCTTTTTTTATGTG+GGG + chr2_2:68448028-68448047 Msa0267090:intron 25.0%
! AAATGTAGCTCAATTCATAA+TGG - chr2_2:68448186-68448205 None:intergenic 25.0%
!! TTTTAAACAAGTCAAGGTTT+AGG + chr2_2:68448497-68448516 Msa0267090:intron 25.0%
! TTTAAACAAGTCAAGGTTTA+GGG + chr2_2:68448498-68448517 Msa0267090:intron 25.0%
!!! TCGTTTTTCTGAAAAACTAT+AGG + chr2_2:68448779-68448798 Msa0267090:intron 25.0%
!!! TATTTTGACAAACTGAACTA+TGG + chr2_2:68448951-68448970 Msa0267090:intron 25.0%
!! TGTGTTTATTTCTCTCTAAA+GGG - chr2_2:68449042-68449061 None:intergenic 25.0%
!! TTGTGTTTATTTCTCTCTAA+AGG - chr2_2:68449043-68449062 None:intergenic 25.0%
! TGTATCTATCTCTTTCAAAA+TGG + chr2_2:68449121-68449140 Msa0267090:intron 25.0%
! TCATTTCTCAAAAGAAATAG+AGG - chr2_2:68449150-68449169 None:intergenic 25.0%
! CATATTCATTCATCAATATG+TGG + chr2_2:68449622-68449641 Msa0267090:intron 25.0%
!! TCCATTTTCCCTAAAAAATT+TGG + chr2_2:68450553-68450572 Msa0267090:intron 25.0%
!!! ACCAAATTTTTTAGGGAAAA+TGG - chr2_2:68450557-68450576 None:intergenic 25.0%
!!! ATGAGGAACCAAATTTTTTA+GGG - chr2_2:68450564-68450583 None:intergenic 25.0%
!!! AATGAGGAACCAAATTTTTT+AGG - chr2_2:68450565-68450584 None:intergenic 25.0%
! CATACAAAATCACATAAATG+AGG - chr2_2:68450581-68450600 None:intergenic 25.0%
!! AATGTAGAGATACTCTAAAA+TGG - chr2_2:68450633-68450652 None:intergenic 25.0%
!!! ATTTTAGAGTATCTCTACAT+TGG + chr2_2:68450632-68450651 Msa0267090:intron 25.0%
!!! AAAGTTCGGAATTTTTCAAT+TGG + chr2_2:68451108-68451127 Msa0267090:intron 25.0%
! TAATAAGTGAATTATTGAGC+AGG + chr2_2:68451485-68451504 Msa0267090:intron 25.0%
! AATAAGTGAATTATTGAGCA+GGG + chr2_2:68451486-68451505 Msa0267090:intron 25.0%
!!! AATACAATTGATGATGAGTA+GGG - chr2_2:68451667-68451686 None:intergenic 25.0%
!!! AAATACAATTGATGATGAGT+AGG - chr2_2:68451668-68451687 None:intergenic 25.0%
!!! GATAACTTTTTTGGTATCAA+AGG - chr2_2:68451802-68451821 None:intergenic 25.0%
! GATACCAAAAAAGTTATCAA+AGG + chr2_2:68451804-68451823 Msa0267090:three_prime_UTR 25.0%
!!! TTTCCCTTTGATAACTTTTT+TGG - chr2_2:68451811-68451830 None:intergenic 25.0%
! ATAATAATGACTTGTGTGAG+AGG - chr2_2:68445784-68445803 None:intergenic 30.0%
ATTAAAAGAATGCAGCTCAT+AGG - chr2_2:68445847-68445866 None:intergenic 30.0%
!!! TTTTTGTTGTTAATGCATGC+AGG + chr2_2:68446038-68446057 Msa0267090:intron 30.0%
!!! TCAATGTGTCATTTTCTAGA+AGG + chr2_2:68446065-68446084 Msa0267090:CDS 30.0%
!!! CAATGTGTCATTTTCTAGAA+GGG + chr2_2:68446066-68446085 Msa0267090:CDS 30.0%
AATTGAAGATGAGTTCATGA+CGG - chr2_2:68446369-68446388 None:intergenic 30.0%
! TTATCACGTTTGAGATGTAT+TGG - chr2_2:68446456-68446475 None:intergenic 30.0%
GGTTTAATCGATGCTATAAT+GGG + chr2_2:68446640-68446659 Msa0267090:intron 30.0%
GTTTAATCGATGCTATAATG+GGG + chr2_2:68446641-68446660 Msa0267090:intron 30.0%
! ATTCGAAATTGTTATTGCAG+TGG - chr2_2:68446668-68446687 None:intergenic 30.0%
ACAATTGCGTTTAATCACTT+TGG + chr2_2:68446766-68446785 Msa0267090:intron 30.0%
TAATCCTACTATTAACAGTC+AGG + chr2_2:68446891-68446910 Msa0267090:CDS 30.0%
AATCCTACTATTAACAGTCA+GGG + chr2_2:68446892-68446911 Msa0267090:CDS 30.0%
!! GTTTTACCCTTTTTGCTTTT+TGG + chr2_2:68446975-68446994 Msa0267090:intron 30.0%
GCATTTCCAAAAAGCAAAAA+GGG - chr2_2:68446984-68447003 None:intergenic 30.0%
TGCATTTCCAAAAAGCAAAA+AGG - chr2_2:68446985-68447004 None:intergenic 30.0%
! CTTTCTTTGACTCATGTTTT+TGG + chr2_2:68447013-68447032 Msa0267090:intron 30.0%
!! ATGCTAATGATGGAATTTTC+AGG + chr2_2:68447089-68447108 Msa0267090:intron 30.0%
! ACAAATGATAATGAATGGAG+TGG + chr2_2:68447129-68447148 Msa0267090:CDS 30.0%
TGTTCAAAAAAGTAAGGTGA+TGG - chr2_2:68447347-68447366 None:intergenic 30.0%
AAGACGTGTTCAAAAAAGTA+AGG - chr2_2:68447353-68447372 None:intergenic 30.0%
CACGTCTTGCATTATTTAAT+TGG + chr2_2:68447365-68447384 Msa0267090:intron 30.0%
AATCATGTTAATATAGGAGG+AGG + chr2_2:68447404-68447423 Msa0267090:intron 30.0%
! ACATTACCTGTCTTATTAAC+TGG + chr2_2:68447448-68447467 Msa0267090:intron 30.0%
CTTATTAACTGGCATTAGAA+AGG + chr2_2:68447459-68447478 Msa0267090:intron 30.0%
! AATAAAAAGTGTAGGACACT+AGG - chr2_2:68447573-68447592 None:intergenic 30.0%
TATAGCATAGTACTGTGAAA+AGG + chr2_2:68447690-68447709 Msa0267090:intron 30.0%
! TGTAATGATGGTGTAAAACA+AGG + chr2_2:68447823-68447842 Msa0267090:intron 30.0%
TGTAAAACAAGGTTGGAAAT+TGG + chr2_2:68447834-68447853 Msa0267090:intron 30.0%
GTAATTTAGTAGTGAATCAG+GGG + chr2_2:68447873-68447892 Msa0267090:intron 30.0%
CGAATGCTAACAAAAAAAAG+TGG - chr2_2:68447973-68447992 None:intergenic 30.0%
! AGTTTTCACCTTTCAAAATC+AGG - chr2_2:68448059-68448078 None:intergenic 30.0%
TCCTTCAATTTCAATCCTAA+AGG - chr2_2:68448264-68448283 None:intergenic 30.0%
AATGAGTGATGTAAGAACAT+TGG - chr2_2:68448439-68448458 None:intergenic 30.0%
GTGAGAAAGAATTGCAAAAA+AGG + chr2_2:68448536-68448555 Msa0267090:intron 30.0%
!! CAAAAAAGGAGTGCTATATT+GGG + chr2_2:68448550-68448569 Msa0267090:intron 30.0%
ATACATGATAAGCTAGATAC+TGG + chr2_2:68448618-68448637 Msa0267090:intron 30.0%
! TCAACTAGCTTATCAGTTAT+TGG - chr2_2:68448661-68448680 None:intergenic 30.0%
CTAAGATCTGTTTATAAGTG+TGG + chr2_2:68448975-68448994 Msa0267090:intron 30.0%
TTAGAAGAAATTAATGACGG+TGG + chr2_2:68449080-68449099 Msa0267090:intron 30.0%
TAGAAGAAATTAATGACGGT+GGG + chr2_2:68449081-68449100 Msa0267090:intron 30.0%
AATTTGTAACGTCATGAGTT+AGG - chr2_2:68449180-68449199 None:intergenic 30.0%
AGGAATTAGAAGAGATATAG+AGG + chr2_2:68449375-68449394 Msa0267090:intron 30.0%
AGAAATGCTGAAGATAAATC+AGG + chr2_2:68449430-68449449 Msa0267090:intron 30.0%
CAACATGTACAGTATAGAAT+TGG - chr2_2:68449516-68449535 None:intergenic 30.0%
CAATTCTATACTGTACATGT+TGG + chr2_2:68449514-68449533 Msa0267090:intron 30.0%
TGAAAAAACCCAATTGAATG+CGG + chr2_2:68449716-68449735 Msa0267090:intron 30.0%
GCTATAGTCAATAAATCTGT+TGG - chr2_2:68449761-68449780 None:intergenic 30.0%
! GATTTGGACTTTTCTAACTT+TGG - chr2_2:68449829-68449848 None:intergenic 30.0%
AGTTAGAAAAGTCCAAATCT+TGG + chr2_2:68449830-68449849 Msa0267090:intron 30.0%
! TGCTGGAAAGCATATAAAAA+GGG - chr2_2:68450011-68450030 None:intergenic 30.0%
! TTGCTGGAAAGCATATAAAA+AGG - chr2_2:68450012-68450031 None:intergenic 30.0%
AACACAACTCAATCAGAAAT+GGG - chr2_2:68450093-68450112 None:intergenic 30.0%
TAACACAACTCAATCAGAAA+TGG - chr2_2:68450094-68450113 None:intergenic 30.0%
! CTATTTGACTGACAACTTTT+CGG + chr2_2:68450123-68450142 Msa0267090:intron 30.0%
TATTGGATCAGAATTTGGAA+AGG + chr2_2:68450305-68450324 Msa0267090:intron 30.0%
ATTGGATCAGAATTTGGAAA+GGG + chr2_2:68450306-68450325 Msa0267090:intron 30.0%
ATTAATTCTCTAGTACCTAC+TGG + chr2_2:68450510-68450529 Msa0267090:intron 30.0%
GGTATGAGTCAAAACATAAA+TGG - chr2_2:68450821-68450840 None:intergenic 30.0%
!!! TTTATGTTTTGACTCATACC+AGG + chr2_2:68450821-68450840 Msa0267090:intron 30.0%
CTATCAATAGCAACGTTAAT+TGG - chr2_2:68450958-68450977 None:intergenic 30.0%
!! TTCGGAATTTTTCAATTGGT+TGG + chr2_2:68451112-68451131 Msa0267090:intron 30.0%
!! AAAGTACCTTCCTTTTTGTT+TGG - chr2_2:68451455-68451474 None:intergenic 30.0%
!! GATAATGGAGATATATATCC+CGG + chr2_2:68451508-68451527 Msa0267090:CDS 30.0%
! ATAATGGAGATATATATCCC+GGG + chr2_2:68451509-68451528 Msa0267090:CDS 30.0%
!! TTCTTTGGGATGATATTCAA+AGG + chr2_2:68451613-68451632 Msa0267090:CDS 30.0%
TACTATGATGATCTCACAAT+TGG + chr2_2:68451761-68451780 Msa0267090:exon 30.0%
ACTATGATGATCTCACAATT+GGG + chr2_2:68451762-68451781 Msa0267090:exon 30.0%
!! GAATTTTTGGGAATTGGGTT+GGG - chr2_2:68445601-68445620 None:intergenic 35.0%
!! AGCTGGAATTTTTGGGAATT+GGG - chr2_2:68445606-68445625 None:intergenic 35.0%
!! AAGCTGGAATTTTTGGGAAT+TGG - chr2_2:68445607-68445626 None:intergenic 35.0%
! CTTAGGAAGCTGGAATTTTT+GGG - chr2_2:68445613-68445632 None:intergenic 35.0%
! ACTTAGGAAGCTGGAATTTT+TGG - chr2_2:68445614-68445633 None:intergenic 35.0%
TCTTCAATGCACAACAACTT+AGG - chr2_2:68445630-68445649 None:intergenic 35.0%
TAAGTTGTTGTGCATTGAAG+AGG + chr2_2:68445629-68445648 Msa0267090:five_prime_UTR 35.0%
TAAGCAAGTTAAGGAAGAAG+GGG - chr2_2:68445726-68445745 None:intergenic 35.0%
GTAAGCAAGTTAAGGAAGAA+GGG - chr2_2:68445727-68445746 None:intergenic 35.0%
AGTAAGCAAGTTAAGGAAGA+AGG - chr2_2:68445728-68445747 None:intergenic 35.0%
ATGGGTAAGTAAGCAAGTTA+AGG - chr2_2:68445735-68445754 None:intergenic 35.0%
! TTGTTGGGGGTATAGTATAT+GGG - chr2_2:68445753-68445772 None:intergenic 35.0%
GAGGTTTATTGTCATTGAAG+AGG - chr2_2:68446347-68446366 None:intergenic 35.0%
AATTCTTACAAAACCGTCGA+CGG + chr2_2:68446385-68446404 Msa0267090:CDS 35.0%
AGTGATGAACATGGATATTG+TGG - chr2_2:68446480-68446499 None:intergenic 35.0%
TGCAATAAGATAACGAGCAA+TGG - chr2_2:68446615-68446634 None:intergenic 35.0%
!! TATAGCATCGATTAAACCGT+CGG - chr2_2:68446638-68446657 None:intergenic 35.0%
CGGTTTAATCGATGCTATAA+TGG + chr2_2:68446639-68446658 Msa0267090:intron 35.0%
! CACGATGAAGTTATGCTTTT+AGG + chr2_2:68446703-68446722 Msa0267090:intron 35.0%
ATATAACCAAGTCTACAACG+CGG - chr2_2:68446814-68446833 None:intergenic 35.0%
TTACCCTGACTGTTAATAGT+AGG - chr2_2:68446898-68446917 None:intergenic 35.0%
AACCTCTTTAGCATTTGGAT+CGG - chr2_2:68446938-68446957 None:intergenic 35.0%
! ATATGCTTTTGTACTCGCAA+TGG + chr2_2:68447043-68447062 Msa0267090:intron 35.0%
TGAGATGCTAATGCTAATGA+TGG + chr2_2:68447079-68447098 Msa0267090:intron 35.0%
! ATGATAATGAATGGAGTGGT+TGG + chr2_2:68447133-68447152 Msa0267090:CDS 35.0%
GAAGGGGATATAATGGTAAA+TGG + chr2_2:68447168-68447187 Msa0267090:CDS 35.0%
GTTAATATAGGAGGAGGAAT+AGG + chr2_2:68447410-68447429 Msa0267090:intron 35.0%
CTAATGCCAGTTAATAAGAC+AGG - chr2_2:68447457-68447476 None:intergenic 35.0%
! ATAGTACTGTGAAAAGGTGT+AGG + chr2_2:68447696-68447715 Msa0267090:intron 35.0%
! TAGTACTGTGAAAAGGTGTA+GGG + chr2_2:68447697-68447716 Msa0267090:intron 35.0%
AAGTTTAGGAAACAGCAAGA+CGG - chr2_2:68447765-68447784 None:intergenic 35.0%
!! TCTTGCTGTTTCCTAAACTT+GGG + chr2_2:68447765-68447784 Msa0267090:intron 35.0%
TTTAGCACTAACCCAAGTTT+AGG - chr2_2:68447779-68447798 None:intergenic 35.0%
! ATGATGGTGTAAAACAAGGT+TGG + chr2_2:68447827-68447846 Msa0267090:intron 35.0%
AACAAAAAAAAGTGGCCGTT+GGG - chr2_2:68447965-68447984 None:intergenic 35.0%
TAACAAAAAAAAGTGGCCGT+TGG - chr2_2:68447966-68447985 None:intergenic 35.0%
TCACTCCCCACATAAAAAAA+GGG - chr2_2:68448036-68448055 None:intergenic 35.0%
TTCCAACAACACTATCCAAA+GGG - chr2_2:68448093-68448112 None:intergenic 35.0%
TCCTAACCATTTGCTTTATG+GGG - chr2_2:68448145-68448164 None:intergenic 35.0%
CTCCTAACCATTTGCTTTAT+GGG - chr2_2:68448146-68448165 None:intergenic 35.0%
!! TCTTAGCAGTTTTAGCCTTT+AGG + chr2_2:68448246-68448265 Msa0267090:intron 35.0%
!! GCCTTTAGGATTGAAATTGA+AGG + chr2_2:68448260-68448279 Msa0267090:intron 35.0%
! TGTAAGAACATTGGTTACAG+AGG - chr2_2:68448430-68448449 None:intergenic 35.0%
!! GCAAAAAAGGAGTGCTATAT+TGG + chr2_2:68448549-68448568 Msa0267090:intron 35.0%
TGATATACGATAGCTGATAG+TGG + chr2_2:68448678-68448697 Msa0267090:intron 35.0%
!! GATAGTGGATGAACGTATAA+TGG + chr2_2:68448693-68448712 Msa0267090:intron 35.0%
TGAGTGTGTAGGGATAAATT+AGG + chr2_2:68449287-68449306 Msa0267090:intron 35.0%
TAGGGATAAATTAGGAGACA+TGG + chr2_2:68449295-68449314 Msa0267090:intron 35.0%
AGATAAATCAGGAGAGAGAA+TGG + chr2_2:68449441-68449460 Msa0267090:intron 35.0%
! ATGGAGGAAAGATTTTCTCT+CGG + chr2_2:68449460-68449479 Msa0267090:intron 35.0%
CGCTAACTTTGATGAAATCA+CGG + chr2_2:68449542-68449561 Msa0267090:intron 35.0%
ATAAATCTGTTGGATACACG+AGG - chr2_2:68449751-68449770 None:intergenic 35.0%
AGAAAGCTCATTCCAAGATT+TGG - chr2_2:68449845-68449864 None:intergenic 35.0%
AGATCTGAATGTGTGTAAAC+AGG + chr2_2:68449871-68449890 Msa0267090:intron 35.0%
GATCTGAATGTGTGTAAACA+GGG + chr2_2:68449872-68449891 Msa0267090:intron 35.0%
TAGAAAAAGACTACGTTTCC+AGG + chr2_2:68449907-68449926 Msa0267090:intron 35.0%
AGAAAAAGACTACGTTTCCA+GGG + chr2_2:68449908-68449927 Msa0267090:intron 35.0%
AAACATCTGATCTGACGTAA+GGG - chr2_2:68449952-68449971 None:intergenic 35.0%
AAAACATCTGATCTGACGTA+AGG - chr2_2:68449953-68449972 None:intergenic 35.0%
! TTACGTCAGATCAGATGTTT+TGG + chr2_2:68449952-68449971 Msa0267090:intron 35.0%
ATTCTGATCCAATAGCAACT+TGG - chr2_2:68450299-68450318 None:intergenic 35.0%
! GTTGCTATTGGATCAGAATT+TGG + chr2_2:68450300-68450319 Msa0267090:intron 35.0%
GGGACATTATTGGATCATAA+TGG + chr2_2:68450441-68450460 Msa0267090:intron 35.0%
AAAATGGACACCACTCAATA+GGG - chr2_2:68450617-68450636 None:intergenic 35.0%
TAAAATGGACACCACTCAAT+AGG - chr2_2:68450618-68450637 None:intergenic 35.0%
TAGCAACGTTAATTGGTTGA+GGG - chr2_2:68450951-68450970 None:intergenic 35.0%
ATAGCAACGTTAATTGGTTG+AGG - chr2_2:68450952-68450971 None:intergenic 35.0%
!!! TCAATTTTAGCTGACACAGA+TGG + chr2_2:68451050-68451069 Msa0267090:intron 35.0%
ACTTCAATGAAGACTTGCAA+TGG - chr2_2:68451151-68451170 None:intergenic 35.0%
CAAGTCTTCATTGAAGTTGA+TGG + chr2_2:68451154-68451173 Msa0267090:intron 35.0%
TTCTTTCTGATCTTGCACAA+GGG + chr2_2:68451177-68451196 Msa0267090:intron 35.0%
!! CCTTTTTGTTTGGTAGACAT+GGG - chr2_2:68451445-68451464 None:intergenic 35.0%
!! TCCTTTTTGTTTGGTAGACA+TGG - chr2_2:68451446-68451465 None:intergenic 35.0%
TGTCTACCAAACAAAAAGGA+AGG + chr2_2:68451446-68451465 Msa0267090:intron 35.0%
GAATTATTGAGCAGGGATAA+TGG + chr2_2:68451493-68451512 Msa0267090:intron 35.0%
CTATGATGATCTCACAATTG+GGG + chr2_2:68451763-68451782 Msa0267090:exon 35.0%
!! GGAATTTTTGGGAATTGGGT+TGG - chr2_2:68445602-68445621 None:intergenic 40.0%
! GTTGTTGGGGGTATAGTATA+TGG - chr2_2:68445754-68445773 None:intergenic 40.0%
!! TGAGAGGTGTTGTTGTTGTT+GGG - chr2_2:68445768-68445787 None:intergenic 40.0%
! GAGATAAGAAAGAGCACAAG+AGG - chr2_2:68445873-68445892 None:intergenic 40.0%
GACCAAGGCAATTGTTTAAC+CGG + chr2_2:68446103-68446122 Msa0267090:CDS 40.0%
TTCCGGTTAAACAATTGCCT+TGG - chr2_2:68446108-68446127 None:intergenic 40.0%
CAATTGTTTAACCGGAAACC+CGG + chr2_2:68446111-68446130 Msa0267090:CDS 40.0%
!! AAATTAGCGGATTGCGGAAT+TGG + chr2_2:68446181-68446200 Msa0267090:CDS 40.0%
CGTATGTTAGTATTCCCTGA+GGG - chr2_2:68446508-68446527 None:intergenic 40.0%
! TGTAGGATTCAGAGGCATAT+CGG + chr2_2:68446543-68446562 Msa0267090:intron 40.0%
!! GGTGACGGAATATCAATCTT+CGG + chr2_2:68446568-68446587 Msa0267090:intron 40.0%
TCGTTATCTTATTGCACCGA+CGG + chr2_2:68446619-68446638 Msa0267090:intron 40.0%
GATAAATACAGTCCAGACAG+AGG + chr2_2:68446733-68446752 Msa0267090:intron 40.0%
GCGTTTAATCACTTTGGTGA+AGG + chr2_2:68446772-68446791 Msa0267090:intron 40.0%
CAGTGGGAAATGTATGCTAT+CGG + chr2_2:68446859-68446878 Msa0267090:intron 40.0%
TCTTTAGCATTTGGATCGGA+AGG - chr2_2:68446934-68446953 None:intergenic 40.0%
TTCCGATCCAAATGCTAAAG+AGG + chr2_2:68446933-68446952 Msa0267090:CDS 40.0%
AGACGAACCTCTTTAGCATT+TGG - chr2_2:68446943-68446962 None:intergenic 40.0%
ATGAATGGAGTGGTTGGAAT+TGG + chr2_2:68447139-68447158 Msa0267090:CDS 40.0%
!!! TTAATTTGCTCCGCGGATTT+TGG - chr2_2:68447258-68447277 None:intergenic 40.0%
ACCATGTACTCTGGTGTATT+CGG + chr2_2:68447285-68447304 Msa0267090:CDS 40.0%
ACAGGTAATGTCCGTTGTTA+GGG - chr2_2:68447439-68447458 None:intergenic 40.0%
! ACATGGTGATGTTCAGTTGA+GGG + chr2_2:68447620-68447639 Msa0267090:intron 40.0%
!! GTCTTGCTGTTTCCTAAACT+TGG + chr2_2:68447764-68447783 Msa0267090:intron 40.0%
GTCACTCCCCACATAAAAAA+AGG - chr2_2:68448037-68448056 None:intergenic 40.0%
AACTTCGTTTAGATCCCCTT+TGG + chr2_2:68448075-68448094 Msa0267090:intron 40.0%
TCCAACAACACTATCCAAAG+GGG - chr2_2:68448092-68448111 None:intergenic 40.0%
CTTCCAACAACACTATCCAA+AGG - chr2_2:68448094-68448113 None:intergenic 40.0%
TTCATGCCCCATAAAGCAAA+TGG + chr2_2:68448136-68448155 Msa0267090:intron 40.0%
CCTCCTAACCATTTGCTTTA+TGG - chr2_2:68448147-68448166 None:intergenic 40.0%
CCATAAAGCAAATGGTTAGG+AGG + chr2_2:68448144-68448163 Msa0267090:intron 40.0%
!! AAAAGGAGTGCTATATTGGG+TGG + chr2_2:68448553-68448572 Msa0267090:intron 40.0%
!! AAAGGAGTGCTATATTGGGT+GGG + chr2_2:68448554-68448573 Msa0267090:intron 40.0%
CATGATAAGCTAGATACTGG+CGG + chr2_2:68448621-68448640 Msa0267090:intron 40.0%
AAAGAAGAGATGCATGTGTG+CGG + chr2_2:68449240-68449259 Msa0267090:intron 40.0%
! CATGTGTGCGGATTGTTATT+TGG + chr2_2:68449252-68449271 Msa0267090:intron 40.0%
TTGTCTAGACATGAGTGTGT+AGG + chr2_2:68449276-68449295 Msa0267090:intron 40.0%
TGTCTAGACATGAGTGTGTA+GGG + chr2_2:68449277-68449296 Msa0267090:intron 40.0%
GGATAAATTAGGAGACATGG+AGG + chr2_2:68449298-68449317 Msa0267090:intron 40.0%
TAAATCAGGAGAGAGAATGG+AGG + chr2_2:68449444-68449463 Msa0267090:intron 40.0%
! CGATGGGTTTGTCAAAATCA+TGG - chr2_2:68449575-68449594 None:intergenic 40.0%
AAAACCCAATTGAATGCGGA+TGG + chr2_2:68449720-68449739 Msa0267090:intron 40.0%
!! GTCAGATCAGATGTTTTGGA+GGG + chr2_2:68449956-68449975 Msa0267090:intron 40.0%
!!! AGATGTTTTGGAGGGTGTTA+TGG + chr2_2:68449964-68449983 Msa0267090:intron 40.0%
!!! GATGTTTTGGAGGGTGTTAT+GGG + chr2_2:68449965-68449984 Msa0267090:intron 40.0%
AATGGGTCCAAGAGGAAAAA+GGG - chr2_2:68450076-68450095 None:intergenic 40.0%
AAATGGGTCCAAGAGGAAAA+AGG - chr2_2:68450077-68450096 None:intergenic 40.0%
! TTACTTTCTCCCTGTTGCTT+TGG - chr2_2:68450192-68450211 None:intergenic 40.0%
AGTGTGAGCAAGTAACAAAG+GGG - chr2_2:68450335-68450354 None:intergenic 40.0%
CAGTGTGAGCAAGTAACAAA+GGG - chr2_2:68450336-68450355 None:intergenic 40.0%
ACAGTGTGAGCAAGTAACAA+AGG - chr2_2:68450337-68450356 None:intergenic 40.0%
GAAGTTTCAACCCTATTGAG+TGG + chr2_2:68450604-68450623 Msa0267090:intron 40.0%
! TATCTCTACATTGGCTGCAA+AGG + chr2_2:68450641-68450660 Msa0267090:intron 40.0%
! ACCAGGTTTTGCATGCTAAA+AGG + chr2_2:68450838-68450857 Msa0267090:intron 40.0%
TACTCGTCGTTATACACACA+CGG + chr2_2:68450899-68450918 Msa0267090:intron 40.0%
!! TTTTAGCTGACACAGATGGT+TGG + chr2_2:68451054-68451073 Msa0267090:intron 40.0%
GTTCTTTCTGATCTTGCACA+AGG + chr2_2:68451176-68451195 Msa0267090:intron 40.0%
!! ACGATGCTTCGATGTTTTGA+AGG + chr2_2:68451265-68451284 Msa0267090:intron 40.0%
!! CGATGCTTCGATGTTTTGAA+GGG + chr2_2:68451266-68451285 Msa0267090:intron 40.0%
GGACATTTGCTTCAAATCGA+AGG - chr2_2:68451360-68451379 None:intergenic 40.0%
CCCATGTCTACCAAACAAAA+AGG + chr2_2:68451442-68451461 Msa0267090:intron 40.0%
GATATATATCCCGGGTTCAA+CGG + chr2_2:68451517-68451536 Msa0267090:CDS 40.0%
TGCACAACAACTTAGGAAGC+TGG - chr2_2:68445623-68445642 None:intergenic 45.0%
TTAAGGAAGAAGGGGTTGAG+GGG - chr2_2:68445718-68445737 None:intergenic 45.0%
GTTAAGGAAGAAGGGGTTGA+GGG - chr2_2:68445719-68445738 None:intergenic 45.0%
AGTTAAGGAAGAAGGGGTTG+AGG - chr2_2:68445720-68445739 None:intergenic 45.0%
!! AGAGGTGTTGTTGTTGTTGG+GGG - chr2_2:68445766-68445785 None:intergenic 45.0%
!! GAGAGGTGTTGTTGTTGTTG+GGG - chr2_2:68445767-68445786 None:intergenic 45.0%
!! GTGAGAGGTGTTGTTGTTGT+TGG - chr2_2:68445769-68445788 None:intergenic 45.0%
TTCAGGGTAAGGATGTTGGT+GGG - chr2_2:68445926-68445945 None:intergenic 45.0%
GAACTGCTCTCAAAAGACCA+AGG + chr2_2:68446088-68446107 Msa0267090:CDS 45.0%
CGCTAATTTCTGACGGTTTG+CGG - chr2_2:68446170-68446189 None:intergenic 45.0%
CGCAAACCGTCAGAAATTAG+CGG + chr2_2:68446168-68446187 Msa0267090:CDS 45.0%
CGCAATCCGCTAATTTCTGA+CGG - chr2_2:68446177-68446196 None:intergenic 45.0%
!! CGTCAGAAATTAGCGGATTG+CGG + chr2_2:68446175-68446194 Msa0267090:CDS 45.0%
! TTCCTGGAACTGGATTTGCT+GGG - chr2_2:68446276-68446295 None:intergenic 45.0%
GAGTGGTTCGTCTTGAATCA+CGG - chr2_2:68446311-68446330 None:intergenic 45.0%
TGATTCAAGACGAACCACTC+TGG + chr2_2:68446311-68446330 Msa0267090:CDS 45.0%
GAGGAGAAGATTATCCAGAG+TGG - chr2_2:68446328-68446347 None:intergenic 45.0%
TGAAGATGAGTTCATGACGG+AGG - chr2_2:68446366-68446385 None:intergenic 45.0%
TGATTTGAACATTTGCGCCG+CGG - chr2_2:68446411-68446430 None:intergenic 45.0%
GGCGCAAATGTTCAAATCAC+CGG + chr2_2:68446412-68446431 Msa0267090:CDS 45.0%
AATGTTCAAATCACCGGCCA+CGG + chr2_2:68446418-68446437 Msa0267090:CDS 45.0%
AGGGTCTACAGTGATGAACA+TGG - chr2_2:68446489-68446508 None:intergenic 45.0%
TTCATCACTGTAGACCCTCA+GGG + chr2_2:68446491-68446510 Msa0267090:intron 45.0%
GCGTATGTTAGTATTCCCTG+AGG - chr2_2:68446509-68446528 None:intergenic 45.0%
TCTTCGGTTCACGTAACATC+TGG + chr2_2:68446584-68446603 Msa0267090:intron 45.0%
GTTACTTGCATTCCTCTGTC+TGG - chr2_2:68446748-68446767 None:intergenic 45.0%
TGGGAAATGTATGCTATCGG+AGG + chr2_2:68446862-68446881 Msa0267090:CDS 45.0%
! TGCTTTTGTACTCGCAATGG+TGG + chr2_2:68447046-68447065 Msa0267090:intron 45.0%
AATGGAGTGGTTGGAATTGG+AGG + chr2_2:68447142-68447161 Msa0267090:CDS 45.0%
GAGCATTCTTTGTACCGTCA+GGG + chr2_2:68447190-68447209 Msa0267090:CDS 45.0%
AGCATTCTTTGTACCGTCAG+GGG + chr2_2:68447191-68447210 Msa0267090:CDS 45.0%
AAGTGTACAGCCAAAATCCG+CGG + chr2_2:68447245-68447264 Msa0267090:CDS 45.0%
!! AAGCTGGTTAATTTGCTCCG+CGG - chr2_2:68447265-68447284 None:intergenic 45.0%
AACCAGCTTACCATGTACTC+TGG + chr2_2:68447276-68447295 Msa0267090:CDS 45.0%
ACCGAATACACCAGAGTACA+TGG - chr2_2:68447289-68447308 None:intergenic 45.0%
GGAATAGGATGCCCTAACAA+CGG + chr2_2:68447425-68447444 Msa0267090:intron 45.0%
GACAGGTAATGTCCGTTGTT+AGG - chr2_2:68447440-68447459 None:intergenic 45.0%
! CACATGGTGATGTTCAGTTG+AGG + chr2_2:68447619-68447638 Msa0267090:intron 45.0%
AGTAGTGAATCAGGGGAAAG+TGG + chr2_2:68447880-68447899 Msa0267090:intron 45.0%
GTAGTGAATCAGGGGAAAGT+GGG + chr2_2:68447881-68447900 Msa0267090:intron 45.0%
TGCTTATGCACGTGATTGTG+AGG + chr2_2:68447915-68447934 Msa0267090:intron 45.0%
CACGTGATTGTGAGGTCATT+GGG + chr2_2:68447923-68447942 Msa0267090:intron 45.0%
! CATTGGGAATCTCTAGCTCA+TGG + chr2_2:68447939-68447958 Msa0267090:intron 45.0%
! GGGAGTGACCTGATTTTGAA+AGG + chr2_2:68448048-68448067 Msa0267090:intron 45.0%
TCCCCTTTGGATAGTGTTGT+TGG + chr2_2:68448088-68448107 Msa0267090:intron 45.0%
GCCCCATAAAGCAAATGGTT+AGG + chr2_2:68448141-68448160 Msa0267090:intron 45.0%
! AACAAGTCAAGGTTTAGGGC+TGG + chr2_2:68448502-68448521 Msa0267090:intron 45.0%
!! AAGGAGTGCTATATTGGGTG+GGG + chr2_2:68448555-68448574 Msa0267090:intron 45.0%
AATTAGGAGACATGGAGGTC+TGG + chr2_2:68449303-68449322 Msa0267090:intron 45.0%
ATTAGGAGACATGGAGGTCT+GGG + chr2_2:68449304-68449323 Msa0267090:intron 45.0%
AGGTCCATCCGCATTCAATT+GGG - chr2_2:68449727-68449746 None:intergenic 45.0%
TAGGTCCATCCGCATTCAAT+TGG - chr2_2:68449728-68449747 None:intergenic 45.0%
ATCTGTTGGATACACGAGGT+AGG - chr2_2:68449747-68449766 None:intergenic 45.0%
!! CGTCAGATCAGATGTTTTGG+AGG + chr2_2:68449955-68449974 Msa0267090:intron 45.0%
! TTGAGCACCCTTTTTCCTCT+TGG + chr2_2:68450066-68450085 Msa0267090:intron 45.0%
CAATCAGAAATGGGTCCAAG+AGG - chr2_2:68450084-68450103 None:intergenic 45.0%
GGACGAAAACCAAAGCAACA+GGG + chr2_2:68450180-68450199 Msa0267090:intron 45.0%
!! GTGAGCTGTGTGACTAGTTT+GGG - chr2_2:68450277-68450296 None:intergenic 45.0%
ACAGCTCACCAAGTTGCTAT+TGG + chr2_2:68450288-68450307 Msa0267090:intron 45.0%
CCTAGAGAATAGCGGTTACT+TGG - chr2_2:68450418-68450437 None:intergenic 45.0%
CCAAGTAACCGCTATTCTCT+AGG + chr2_2:68450415-68450434 Msa0267090:intron 45.0%
!! TAACCGCTATTCTCTAGGAC+TGG + chr2_2:68450420-68450439 Msa0267090:intron 45.0%
!! AACCGCTATTCTCTAGGACT+GGG + chr2_2:68450421-68450440 Msa0267090:intron 45.0%
!! CTCTAGGACTGGGACATTAT+TGG + chr2_2:68450431-68450450 Msa0267090:intron 45.0%
! GCCTTTTAGCATGCAAAACC+TGG - chr2_2:68450842-68450861 None:intergenic 45.0%
GACGAGTAGGAAAAAGTGAG+TGG - chr2_2:68450887-68450906 None:intergenic 45.0%
GTGTGTGTATAACGACGAGT+AGG - chr2_2:68450900-68450919 None:intergenic 45.0%
CCAACAGCAAGGGTTACAAT+GGG + chr2_2:68451560-68451579 Msa0267090:CDS 45.0%
AGCAAGGGTTACAATGGGAA+TGG + chr2_2:68451565-68451584 Msa0267090:CDS 45.0%
GCAAGGGTTACAATGGGAAT+GGG + chr2_2:68451566-68451585 Msa0267090:CDS 45.0%
CAAGGGTTACAATGGGAATG+GGG + chr2_2:68451567-68451586 Msa0267090:CDS 45.0%
AAGGGTTACAATGGGAATGG+GGG + chr2_2:68451568-68451587 Msa0267090:CDS 45.0%
AATGACGATGGGGACTTCTT+TGG + chr2_2:68451598-68451617 Msa0267090:CDS 45.0%
ATGACGATGGGGACTTCTTT+GGG + chr2_2:68451599-68451618 Msa0267090:CDS 45.0%
TGATGATCTCACAATTGGGG+TGG + chr2_2:68451766-68451785 Msa0267090:exon 45.0%
GATGATCTCACAATTGGGGT+GGG + chr2_2:68451767-68451786 Msa0267090:exon 45.0%
!!! GGGGTTGAGGGGTTTTGTTT+TGG - chr2_2:68445707-68445726 None:intergenic 50.0%
! GTAAGGATGTTGGTGGGGTA+AGG - chr2_2:68445920-68445939 None:intergenic 50.0%
TCAGGGTAAGGATGTTGGTG+GGG - chr2_2:68445925-68445944 None:intergenic 50.0%
CTTCAGGGTAAGGATGTTGG+TGG - chr2_2:68445927-68445946 None:intergenic 50.0%
CAGCTTCAGGGTAAGGATGT+TGG - chr2_2:68445930-68445949 None:intergenic 50.0%
ACATCCTTACCCTGAAGCTG+TGG + chr2_2:68445930-68445949 Msa0267090:CDS 50.0%
TGAACCACAGCTTCAGGGTA+AGG - chr2_2:68445937-68445956 None:intergenic 50.0%
GTTCGTGAACCACAGCTTCA+GGG - chr2_2:68445942-68445961 None:intergenic 50.0%
AGTTCGTGAACCACAGCTTC+AGG - chr2_2:68445943-68445962 None:intergenic 50.0%
!! GCGGATTGCGGAATTGGTTT+TGG + chr2_2:68446187-68446206 Msa0267090:CDS 50.0%
!! TGGATTTGCTGGGTCGTTGT+CGG - chr2_2:68446266-68446285 None:intergenic 50.0%
GTTCCTGGAACTGGATTTGC+TGG - chr2_2:68446277-68446296 None:intergenic 50.0%
ATTGGAGTGTGATGCAACCG+TGG - chr2_2:68446438-68446457 None:intergenic 50.0%
GTTCATCACTGTAGACCCTC+AGG + chr2_2:68446490-68446509 Msa0267090:intron 50.0%
CCTCTGAATCCTACATGCGT+TGG - chr2_2:68446538-68446557 None:intergenic 50.0%
CCAACGCATGTAGGATTCAG+AGG + chr2_2:68446535-68446554 Msa0267090:intron 50.0%
! GGATTCAGAGGCATATCGGA+CGG + chr2_2:68446547-68446566 Msa0267090:intron 50.0%
AGAATGCCGCGTTGTAGACT+TGG + chr2_2:68446805-68446824 Msa0267090:intron 50.0%
GATCGGAAGGAGCTGTGTAA+CGG - chr2_2:68446921-68446940 None:intergenic 50.0%
!!! TTTTCAGGTGACAAAGCGCG+TGG + chr2_2:68447104-68447123 Msa0267090:intron 50.0%
GAGTGGTTGGAATTGGAGGA+CGG + chr2_2:68447146-68447165 Msa0267090:CDS 50.0%
GTTGGAATTGGAGGACGGAA+GGG + chr2_2:68447151-68447170 Msa0267090:CDS 50.0%
TTGGAATTGGAGGACGGAAG+GGG + chr2_2:68447152-68447171 Msa0267090:CDS 50.0%
GAGGACGGAAGGGGATATAA+TGG + chr2_2:68447161-68447180 Msa0267090:CDS 50.0%
! GGAGCATTCTTTGTACCGTC+AGG + chr2_2:68447189-68447208 Msa0267090:CDS 50.0%
ATTCTTTGTACCGTCAGGGG+TGG + chr2_2:68447194-68447213 Msa0267090:CDS 50.0%
TTCTTTGTACCGTCAGGGGT+GGG + chr2_2:68447195-68447214 Msa0267090:CDS 50.0%
CACCAGAGTACATGGTAAGC+TGG - chr2_2:68447281-68447300 None:intergenic 50.0%
TACTCCCTTCTCTGACCACA+TGG + chr2_2:68447546-68447565 Msa0267090:intron 50.0%
AGGACCATGTGGTCAGAGAA+GGG - chr2_2:68447553-68447572 None:intergenic 50.0%
TAGGACCATGTGGTCAGAGA+AGG - chr2_2:68447554-68447573 None:intergenic 50.0%
TGTAGGACACTAGGACCATG+TGG - chr2_2:68447564-68447583 None:intergenic 50.0%
TGATGTTCAGTTGAGGGACG+CGG + chr2_2:68447626-68447645 Msa0267090:intron 50.0%
GCACGTGATTGTGAGGTCAT+TGG + chr2_2:68447922-68447941 Msa0267090:intron 50.0%
! ATCTCTAGCTCATGGCCCAA+CGG + chr2_2:68447947-68447966 Msa0267090:intron 50.0%
TTAGGAGACATGGAGGTCTG+GGG + chr2_2:68449305-68449324 Msa0267090:intron 50.0%
GAGCTGAGTAGAGAGAGGAA+AGG + chr2_2:68449327-68449346 Msa0267090:intron 50.0%
GTTTCCAGGGTAGAGTGACA+AGG + chr2_2:68449921-68449940 Msa0267090:intron 50.0%
ATCTGATCTGACGTAAGGGC+AGG - chr2_2:68449948-68449967 None:intergenic 50.0%
TGCTTTCCAGCAAGTAAGCG+TGG + chr2_2:68450019-68450038 Msa0267090:intron 50.0%
GCTTTCCAGCAAGTAAGCGT+GGG + chr2_2:68450020-68450039 Msa0267090:intron 50.0%
GGGACGAAAACCAAAGCAAC+AGG + chr2_2:68450179-68450198 Msa0267090:intron 50.0%
! GGTGAGCTGTGTGACTAGTT+TGG - chr2_2:68450278-68450297 None:intergenic 50.0%
GTCCCAGTCCTAGAGAATAG+CGG - chr2_2:68450426-68450445 None:intergenic 50.0%
GTACCTACTGGTCAGTAGAG+TGG + chr2_2:68450522-68450541 Msa0267090:intron 50.0%
TCACCACTCTACTGACCAGT+AGG - chr2_2:68450528-68450547 None:intergenic 50.0%
ACCTTCTGTTCAACCTGCTG+TGG + chr2_2:68451077-68451096 Msa0267090:intron 50.0%
CTGTGGCTGGGGTTAAAGTT+CGG + chr2_2:68451094-68451113 Msa0267090:intron 50.0%
ATATATCCCGGGTTCAACGG+TGG + chr2_2:68451520-68451539 Msa0267090:CDS 50.0%
GCCAACAGCAAGGGTTACAA+TGG + chr2_2:68451559-68451578 Msa0267090:CDS 50.0%
! CCCATTGTAACCCTTGCTGT+TGG - chr2_2:68451563-68451582 None:intergenic 50.0%
AGGGTTACAATGGGAATGGG+GGG + chr2_2:68451569-68451588 Msa0267090:CDS 50.0%
TTGGTGGGGTAAGGTGAGGT+TGG - chr2_2:68445911-68445930 None:intergenic 55.0%
! GATGTTGGTGGGGTAAGGTG+AGG - chr2_2:68445915-68445934 None:intergenic 55.0%
GCAATCGTCTACCGGGTTTC+CGG - chr2_2:68446125-68446144 None:intergenic 55.0%
GAAACCCGGTAGACGATTGC+TGG + chr2_2:68446125-68446144 Msa0267090:CDS 55.0%
ATCGCCAGCAATCGTCTACC+GGG - chr2_2:68446132-68446151 None:intergenic 55.0%
CATCGCCAGCAATCGTCTAC+CGG - chr2_2:68446133-68446152 None:intergenic 55.0%
GACGGTTTGCGGACCAGTTT+GGG - chr2_2:68446159-68446178 None:intergenic 55.0%
TGACGGTTTGCGGACCAGTT+TGG - chr2_2:68446160-68446179 None:intergenic 55.0%
ACCTCCTTTACCTCCCATGG+CGG - chr2_2:68446218-68446237 None:intergenic 55.0%
CTGACCTCCTTTACCTCCCA+TGG - chr2_2:68446221-68446240 None:intergenic 55.0%
! ATTTGCTGGGTCGTTGTCGG+AGG - chr2_2:68446263-68446282 None:intergenic 55.0%
GACCCAGCAAATCCAGTTCC+AGG + chr2_2:68446271-68446290 Msa0267090:CDS 55.0%
! TGACGGAGTGTTCCTGGAAC+TGG - chr2_2:68446286-68446305 None:intergenic 55.0%
CGTCTTGAATCACGGCGTGA+CGG - chr2_2:68446303-68446322 None:intergenic 55.0%
! AGAGGCATATCGGACGGTGA+CGG + chr2_2:68446553-68446572 Msa0267090:intron 55.0%
GGTTGGAATTGGAGGACGGA+AGG + chr2_2:68447150-68447169 Msa0267090:CDS 55.0%
TCTTTGTACCGTCAGGGGTG+GGG + chr2_2:68447196-68447215 Msa0267090:CDS 55.0%
GGGGATGAGTGCTCAGTATG+CGG + chr2_2:68447215-68447234 Msa0267090:CDS 55.0%
GATGAGTGCTCAGTATGCGG+AGG + chr2_2:68447218-68447237 Msa0267090:CDS 55.0%
! CTGGTGTATTCGGTGATCCC+AGG + chr2_2:68447295-68447314 Msa0267090:CDS 55.0%
AGGTCCTTGTCACTCTACCC+TGG - chr2_2:68449928-68449947 None:intergenic 55.0%
AAGGTCCCACGCTTACTTGC+TGG - chr2_2:68450028-68450047 None:intergenic 55.0%
! GCCACAGCAGGTTGAACAGA+AGG - chr2_2:68451081-68451100 None:intergenic 55.0%
TCTGTTCAACCTGCTGTGGC+TGG + chr2_2:68451081-68451100 Msa0267090:intron 55.0%
CTGTTCAACCTGCTGTGGCT+GGG + chr2_2:68451082-68451101 Msa0267090:intron 55.0%
TGTTCAACCTGCTGTGGCTG+GGG + chr2_2:68451083-68451102 Msa0267090:intron 55.0%
ACTTTAACCCCAGCCACAGC+AGG - chr2_2:68451093-68451112 None:intergenic 55.0%
ACGACAGGAGCCAACAGCAA+GGG + chr2_2:68451550-68451569 Msa0267090:CDS 55.0%
GAAGTCCCCATCGTCATTGC+TGG - chr2_2:68451596-68451615 None:intergenic 55.0%
! GATGATGAGTAGGGTGCTCG+CGG - chr2_2:68451658-68451677 None:intergenic 55.0%
TACAAAACCGTCGACGGCCG+CGG + chr2_2:68446391-68446410 Msa0267090:CDS 60.0%
GAGTGTGATGCAACCGTGGC+CGG - chr2_2:68446434-68446453 None:intergenic 60.0%
CTGGGGAGCTGAGTAGAGAG+AGG + chr2_2:68449322-68449341 Msa0267090:intron 60.0%
TATCCCGGGTTCAACGGTGG+TGG + chr2_2:68451523-68451542 Msa0267090:CDS 60.0%
ATCCCGGGTTCAACGGTGGT+GGG + chr2_2:68451524-68451543 Msa0267090:CDS 60.0%
!! CTTGCTGTTGGCTCCTGTCG+TGG - chr2_2:68451551-68451570 None:intergenic 60.0%
CACGACAGGAGCCAACAGCA+AGG + chr2_2:68451549-68451568 Msa0267090:CDS 60.0%
GGGGGTCCAGCAATGACGAT+GGG + chr2_2:68451587-68451606 Msa0267090:CDS 60.0%
GGGGTCCAGCAATGACGATG+GGG + chr2_2:68451588-68451607 Msa0267090:CDS 60.0%
GCTGGCGATGCGACCCAAAC+TGG + chr2_2:68446143-68446162 Msa0267090:CDS 65.0%
!!! TGGTTTTGGTCGCGCCGCCA+TGG + chr2_2:68446201-68446220 Msa0267090:CDS 65.0%
!! GGTTTTGGTCGCGCCGCCAT+GGG + chr2_2:68446202-68446221 Msa0267090:CDS 65.0%
GCCGCCATGGGAGGTAAAGG+AGG + chr2_2:68446214-68446233 Msa0267090:CDS 65.0%
! ACGGCGTGACGGAGTGTTCC+TGG - chr2_2:68446292-68446311 None:intergenic 65.0%
CGCGCGAGTCCAACGCATGT+AGG + chr2_2:68446526-68446545 Msa0267090:intron 65.0%
! GTACTCGCAATGGTGGCGCG+TGG + chr2_2:68447053-68447072 Msa0267090:intron 65.0%
GCACTCATCCCCACCCCTGA+CGG - chr2_2:68447207-68447226 None:intergenic 65.0%
GTCCCACCACCGTTGAACCC+GGG - chr2_2:68451529-68451548 None:intergenic 65.0%
GGTCCCACCACCGTTGAACC+CGG - chr2_2:68451530-68451549 None:intergenic 65.0%
!! AACGGTGGTGGGACCACGAC+AGG + chr2_2:68451535-68451554 Msa0267090:CDS 65.0%
GGGGGGTCCAGCAATGACGA+TGG + chr2_2:68451586-68451605 Msa0267090:CDS 65.0%
TTTGGTCGCGCCGCCATGGG+AGG + chr2_2:68446205-68446224 Msa0267090:CDS 70.0%
CGCGCCGCCATGGGAGGTAA+AGG + chr2_2:68446211-68446230 Msa0267090:CDS 70.0%
ATTTGCGCCGCGGCCGTCGA+CGG - chr2_2:68446401-68446420 None:intergenic 70.0%
! CTCGCAATGGTGGCGCGTGG+AGG + chr2_2:68447056-68447075 Msa0267090:intron 70.0%
!! TCGCGGTGCTGCTTGGCTGC+TGG - chr2_2:68451641-68451660 None:intergenic 70.0%
!! AGGGTGCTCGCGGTGCTGCT+TGG - chr2_2:68451648-68451667 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 68445597 68451940 68445597 ID=Msa0267090;Name=Msa0267090
chr2_2 mRNA 68445597 68451940 68445597 ID=Msa0267090-mRNA-1;Parent=Msa0267090;Name=Msa0267090-mRNA-1;_AED=0.16;_eAED=0.16;_QI=241|0.75|0.6|1|1|1|5|172|373
chr2_2 exon 68445597 68445968 68445597 ID=Msa0267090-mRNA-1:exon:21681;Parent=Msa0267090-mRNA-1
chr2_2 exon 68446060 68446489 68446060 ID=Msa0267090-mRNA-1:exon:21682;Parent=Msa0267090-mRNA-1
chr2_2 exon 68446862 68446954 68446862 ID=Msa0267090-mRNA-1:exon:21683;Parent=Msa0267090-mRNA-1
chr2_2 exon 68447111 68447316 68447111 ID=Msa0267090-mRNA-1:exon:21684;Parent=Msa0267090-mRNA-1
chr2_2 exon 68451507 68451940 68451507 ID=Msa0267090-mRNA-1:exon:21685;Parent=Msa0267090-mRNA-1
chr2_2 five_prime_UTR 68445597 68445837 68445597 ID=Msa0267090-mRNA-1:five_prime_utr;Parent=Msa0267090-mRNA-1
chr2_2 CDS 68445838 68445968 68445838 ID=Msa0267090-mRNA-1:cds;Parent=Msa0267090-mRNA-1
chr2_2 CDS 68446060 68446489 68446060 ID=Msa0267090-mRNA-1:cds;Parent=Msa0267090-mRNA-1
chr2_2 CDS 68446862 68446954 68446862 ID=Msa0267090-mRNA-1:cds;Parent=Msa0267090-mRNA-1
chr2_2 CDS 68447111 68447316 68447111 ID=Msa0267090-mRNA-1:cds;Parent=Msa0267090-mRNA-1
chr2_2 CDS 68451507 68451768 68451507 ID=Msa0267090-mRNA-1:cds;Parent=Msa0267090-mRNA-1
chr2_2 three_prime_UTR 68451769 68451940 68451769 ID=Msa0267090-mRNA-1:three_prime_utr;Parent=Msa0267090-mRNA-1
Gene Sequence

>Msa0267090

ATGCTTCCTATGAGCTGCATTCTTTTAATGTGCCTCTTGTGCTCTTTCTTATCTCAAATCAAAGCTTTCTCCAACCTCACCTTACCCCACCAACATCCTTACCCTGAAGCTGTGGTTCACGAACTTCATCAGAAAATCAATGTGTCATTTTCTAGAAGGGAACTGCTCTCAAAAGACCAAGGCAATTGTTTAACCGGAAACCCGGTAGACGATTGCTGGCGATGCGACCCAAACTGGTCCGCAAACCGTCAGAAATTAGCGGATTGCGGAATTGGTTTTGGTCGCGCCGCCATGGGAGGTAAAGGAGGTCAGATCTACATAGTGACAGATTCCTCCGACAACGACCCAGCAAATCCAGTTCCAGGAACACTCCGTCACGCCGTGATTCAAGACGAACCACTCTGGATAATCTTCTCCTCTTCAATGACAATAAACCTCCGTCATGAACTCATCTTCAATTCTTACAAAACCGTCGACGGCCGCGGCGCAAATGTTCAAATCACCGGCCACGGTTGCATCACACTCCAATACATCTCAAACGTGATAATCCACAATATCCATTGGGAAATGTATGCTATCGGAGGTAGTGCTAATCCTACTATTAACAGTCAGGGTAACCGTTACACAGCTCCTTCCGATCCAAATGCTAAAGAGGTGACAAAGCGCGTGGATACAAATGATAATGAATGGAGTGGTTGGAATTGGAGGACGGAAGGGGATATAATGGTAAATGGAGCATTCTTTGTACCGTCAGGGGTGGGGATGAGTGCTCAGTATGCGGAGGCGTCAAGTGTACAGCCAAAATCCGCGGAGCAAATTAACCAGCTTACCATGTACTCTGGTGTATTCGGTGATCCCAGGGATAATGGAGATATATATCCCGGGTTCAACGGTGGTGGGACCACGACAGGAGCCAACAGCAAGGGTTACAATGGGAATGGGGGGTCCAGCAATGACGATGGGGACTTCTTTGGGATGATATTCAAAGGTACCAGCAGCCAAGCAGCACCGCGAGCACCCTACTCATCATCAATTGTATTTGTTTCAACTTTTTTGTCTCTTTTAATTATTTTCAATTTGGACATTATCACCAACTATGATATTCTATTATCATTACTATGA
Protein sequence

>Msa0267090

MLPMSCILLMCLLCSFLSQIKAFSNLTLPHQHPYPEAVVHELHQKINVSFSRRELLSKDQGNCLTGNPVDDCWRCDPNWSANRQKLADCGIGFGRAAMGGKGGQIYIVTDSSDNDPANPVPGTLRHAVIQDEPLWIIFSSSMTINLRHELIFNSYKTVDGRGANVQITGHGCITLQYISNVIIHNIHWEMYAIGGSANPTINSQGNRYTAPSDPNAKEVTKRVDTNDNEWSGWNWRTEGDIMVNGAFFVPSGVGMSAQYAEASSVQPKSAEQINQLTMYSGVFGDPRDNGDIYPGFNGGGTTTGANSKGYNGNGGSSNDDGDFFGMIFKGTSSQAAPRAPYSSSIVFVSTFLSLLIIFNLDIITNYDILLSLL*