AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0632130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0632130 MtrunA17_Chr8g0384431 94.552 826 28 1 1 826 1 809 0.0 1615
Msa0632130 MtrunA17_Chr3g0130381 73.082 821 185 8 1 818 1 788 0.0 1229
Msa0632130 MtrunA17_Chr3g0125511 56.865 823 283 9 1 819 1 755 0.0 949
Msa0632130 MtrunA17_Chr8g0372471 55.154 747 287 10 77 808 179 892 0.0 833
Msa0632130 MtrunA17_Chr5g0437501 53.005 549 238 5 270 811 75 610 0.0 624
Msa0632130 MtrunA17_Chr3g0113981 54.981 522 220 5 287 808 164 670 0.0 608
Msa0632130 MtrunA17_Chr1g0155141 50.000 528 242 5 283 808 194 701 0.0 590
Msa0632130 MtrunA17_Chr1g0159741 48.221 506 242 9 288 785 141 634 7.12e-165 493
Msa0632130 MtrunA17_Chr3g0112341 44.404 554 279 11 252 789 107 647 7.43e-164 491
Msa0632130 MtrunA17_Chr5g0404771 48.115 557 223 9 21 528 20 559 1.27e-162 484
Msa0632130 MtrunA17_Chr1g0183721 44.796 538 253 14 298 810 71 589 7.88e-148 447
Msa0632130 MtrunA17_Chr5g0435751 42.058 554 275 12 249 789 79 599 1.09e-146 445
Msa0632130 MtrunA17_Chr1g0167381 44.465 533 262 13 298 810 101 619 1.64e-146 445
Msa0632130 MtrunA17_Chr1g0187601 42.722 529 269 13 298 806 100 614 2.66e-140 429
Msa0632130 MtrunA17_Chr8g0350351 41.794 524 270 14 298 806 97 600 2.86e-139 425
Msa0632130 MtrunA17_Chr5g0404761 63.251 283 100 2 531 813 1 279 1.81e-138 411
Msa0632130 MtrunA17_Chr7g0246681 40.909 528 271 14 298 807 84 588 1.26e-137 421
Msa0632130 MtrunA17_Chr4g0055031 42.301 539 270 15 288 806 86 603 8.61e-134 411
Msa0632130 MtrunA17_Chr6g0472571 42.166 517 259 18 298 794 114 610 1.19e-132 409
Msa0632130 MtrunA17_Chr8g0369481 40.643 529 275 13 298 806 79 588 7.48e-130 400
Msa0632130 MtrunA17_Chr8g0388881 40.335 538 281 18 291 806 101 620 3.06e-129 400
Msa0632130 MtrunA17_Chr7g0214551 40.884 543 285 12 260 786 22 544 3.19e-128 395
Msa0632130 MtrunA17_Chr5g0409411 40.323 558 293 14 275 809 53 593 1.19e-127 395
Msa0632130 MtrunA17_Chr8g0361791 41.487 511 266 14 298 794 93 584 1.48e-127 395
Msa0632130 MtrunA17_Chr1g0203741 39.706 544 290 16 262 786 69 593 1.26e-126 394
Msa0632130 MtrunA17_Chr7g0246701 40.613 522 270 17 290 790 103 605 8.67e-125 389
Msa0632130 MtrunA17_Chr8g0350391 39.706 544 276 20 298 810 114 636 1.27e-123 386
Msa0632130 MtrunA17_Chr5g0416991 40.875 526 275 13 298 806 93 599 1.71e-123 384
Msa0632130 MtrunA17_Chr3g0092501 40.918 523 270 14 298 806 94 591 1.84e-123 384
Msa0632130 MtrunA17_Chr1g0171781 40.684 526 278 15 298 806 95 603 5.18e-122 380
Msa0632130 MtrunA17_Chr5g0426281 32.824 524 296 14 301 790 151 652 9.28e-85 284
Msa0632130 MtrunA17_Chr3g0115931 33.208 533 291 17 298 790 163 670 8.69e-84 282
Msa0632130 MtrunA17_Chr4g0043131 50.735 136 61 3 664 796 36 168 4.04e-38 140
Msa0632130 MtrunA17_Chr4g0043121 28.662 314 197 10 298 596 95 396 5.74e-36 141
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0632130 AT5G64030.1 64.286 840 268 8 1 819 1 829 0.0 1123
Msa0632130 AT1G29470.1 59.129 827 273 12 1 819 1 770 0.0 996
Msa0632130 AT1G29470.2 59.129 827 273 12 1 819 1 770 0.0 996
Msa0632130 AT2G34300.2 58.151 822 289 10 1 819 1 770 0.0 982
Msa0632130 AT2G34300.3 58.151 822 289 10 1 819 1 770 0.0 982
Msa0632130 AT2G34300.1 58.151 822 289 10 1 819 1 770 0.0 982
Msa0632130 AT3G51070.1 53.743 895 323 12 1 808 1 891 0.0 964
Msa0632130 AT3G51070.2 53.902 833 293 12 1 746 1 829 0.0 888
Msa0632130 AT2G40280.1 54.735 528 220 6 286 812 78 587 0.0 620
Msa0632130 AT3G56080.1 53.704 540 228 7 273 808 89 610 0.0 612
Msa0632130 AT1G19430.1 49.333 525 245 6 286 808 219 724 0.0 577
Msa0632130 AT1G19430.3 49.333 525 245 6 286 808 219 724 0.0 577
Msa0632130 AT3G56080.2 55.042 476 196 6 273 744 89 550 0.0 559
Msa0632130 AT5G06050.1 44.425 565 277 14 252 794 99 648 4.73e-169 505
Msa0632130 AT1G77260.1 44.186 559 283 10 243 785 86 631 2.11e-163 490
Msa0632130 AT2G39750.1 45.009 531 270 11 265 789 157 671 5.88e-163 490
Msa0632130 AT3G23300.2 43.609 532 267 14 298 810 88 605 1.09e-142 435
Msa0632130 AT3G23300.1 43.609 532 267 14 298 810 88 605 1.09e-142 435
Msa0632130 AT4G14360.1 43.045 532 270 14 298 810 85 602 7.63e-142 432
Msa0632130 AT4G14360.2 43.045 532 270 14 298 810 85 602 7.63e-142 432
Msa0632130 AT5G14430.1 46.733 505 236 13 298 786 89 576 2.92e-140 429
Msa0632130 AT1G04430.1 42.778 540 263 17 300 810 95 617 5.10e-139 426
Msa0632130 AT1G04430.3 42.778 540 263 17 300 810 95 617 5.10e-139 426
Msa0632130 AT1G04430.2 42.778 540 263 17 300 810 95 617 5.10e-139 426
Msa0632130 AT5G14430.2 46.139 505 239 13 298 786 89 576 5.46e-138 422
Msa0632130 AT4G00740.1 39.885 524 280 11 299 807 91 594 2.16e-137 421
Msa0632130 AT4G00740.2 39.885 524 280 11 299 807 91 594 2.16e-137 421
Msa0632130 AT1G31850.1 41.541 532 268 13 298 806 85 596 1.61e-134 413
Msa0632130 AT1G31850.2 41.541 532 268 13 298 806 85 596 1.61e-134 413
Msa0632130 AT1G31850.4 41.541 532 268 13 298 806 85 596 1.61e-134 413
Msa0632130 AT1G31850.3 41.541 532 268 13 298 806 85 596 1.61e-134 413
Msa0632130 AT5G04060.1 43.264 527 260 13 298 806 92 597 6.79e-133 409
Msa0632130 AT4G19120.1 41.495 535 264 13 298 806 79 590 1.81e-132 408
Msa0632130 AT4G19120.2 41.495 535 264 13 298 806 79 590 1.81e-132 408
Msa0632130 AT1G33170.1 41.808 531 272 14 298 806 119 634 5.22e-131 405
Msa0632130 AT4G10440.1 41.061 509 270 12 298 790 102 596 2.07e-130 404
Msa0632130 AT1G26850.2 41.634 514 267 15 298 794 95 592 4.85e-130 402
Msa0632130 AT1G26850.1 41.634 514 267 15 298 794 95 592 4.85e-130 402
Msa0632130 AT3G10200.1 42.659 504 255 12 298 787 81 564 8.25e-129 398
Msa0632130 AT1G19430.2 44.444 396 200 5 286 680 219 595 1.06e-126 393
Msa0632130 AT2G45750.1 40.698 516 267 17 298 790 96 595 3.72e-125 390
Msa0632130 AT4G18030.1 40.850 541 278 15 287 806 84 603 3.64e-124 387
Msa0632130 AT4G00750.1 42.394 493 245 17 320 789 125 601 4.90e-123 384
Msa0632130 AT2G43200.2 40.945 508 267 14 298 789 100 590 5.47e-122 381
Msa0632130 AT2G43200.1 40.945 508 267 14 298 789 100 590 5.47e-122 381
Msa0632130 AT3G10200.2 43.035 481 240 12 298 764 81 541 9.10e-122 380
Msa0632130 AT4G19120.3 41.667 444 213 12 298 718 79 499 2.17e-103 328
Msa0632130 AT1G26850.3 40.241 415 216 14 298 696 95 493 2.92e-88 289
Msa0632130 AT1G78240.1 31.099 537 309 16 291 790 149 661 3.34e-83 280
Msa0632130 AT1G78240.2 31.099 537 309 16 291 790 149 661 3.34e-83 280
Msa0632130 AT1G13860.4 32.844 545 299 16 298 807 90 602 6.49e-78 264
Msa0632130 AT1G13860.3 32.844 545 299 16 298 807 90 602 6.49e-78 264
Msa0632130 AT1G13860.1 32.844 545 299 16 298 807 90 602 6.49e-78 264
Msa0632130 AT1G13860.5 32.844 545 299 16 298 807 90 602 6.49e-78 264
Msa0632130 AT1G13860.2 34.762 420 231 11 413 807 45 446 1.37e-70 239
Msa0632130 AT2G03480.1 32.270 533 306 17 299 803 96 601 3.01e-69 240
Msa0632130 AT2G03480.2 32.700 526 302 16 299 803 96 590 5.23e-69 239
Msa0632130 AT2G03480.3 31.660 259 162 7 299 544 96 352 3.81e-32 130

Find 250 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCTGAAGTTGGAGTTTA+TGG 0.092408 4_3:+15760242 Msa0632130:CDS
GGTGATTTGCTCAGTCTTTC+TGG 0.096552 4_3:-15760206 None:intergenic
CGATTTCTCTTCCTGCTTTC+CGG 0.102196 4_3:-15757779 None:intergenic
TTGTACCTTCTCTCTGCTTT+TGG 0.173033 4_3:-15758505 None:intergenic
TCTAATGAGCTACTCCCTTC+TGG 0.179725 4_3:+15758183 Msa0632130:CDS
CTTTGAGGGATTTGAAAATT+TGG 0.180019 4_3:+15760504 Msa0632130:CDS
TATTCTTGACTACCAAAATT+TGG 0.212050 4_3:+15761328 Msa0632130:three_prime_UTR
GTGTCCAAGTCTTATCTAAA+TGG 0.222273 4_3:+15760317 Msa0632130:CDS
GATGTCTTCTTGTTCTGATT+TGG 0.232136 4_3:-15757856 None:intergenic
ACAAAACTAATACCAAATTT+TGG 0.233814 4_3:-15761340 None:intergenic
TATACGAAAGATGATGATTT+TGG 0.244828 4_3:-15756610 None:intergenic
TCCTGCTTTCCGGGCATAAC+AGG 0.246833 4_3:-15757769 None:intergenic
GATTTCTCTTCCTGCTTTCC+GGG 0.249825 4_3:-15757778 None:intergenic
TGAGCTTCATGTTCATCTTT+TGG 0.251202 4_3:-15759300 None:intergenic
AGGAATTCTGATCACATTCT+TGG 0.266568 4_3:+15761257 Msa0632130:three_prime_UTR
AGATCTGCTTCTTTCATAAT+AGG 0.272763 4_3:+15756750 Msa0632130:five_prime_UTR
TTTGGTGGGGTAAAGTTGAT+AGG 0.277208 4_3:-15756592 None:intergenic
CTGTAACTTTCACCCAATTC+TGG 0.287508 4_3:-15758653 None:intergenic
CAAGCTCTCCAGCTCCTTAA+TGG 0.288378 4_3:-15760880 None:intergenic
CAAACAAACACGTGTGATAT+TGG 0.295996 4_3:+15759206 Msa0632130:CDS
AGACCACGTTCATAAATAAT+TGG 0.297024 4_3:-15760566 None:intergenic
AATACAAGGGGCACCAGAAT+TGG 0.314022 4_3:+15758640 Msa0632130:CDS
TGAGAAATGAAATCTTGAAT+TGG 0.314158 4_3:-15756658 None:intergenic
ACATATAGAAGGCTCATTCT+TGG 0.315163 4_3:-15759970 None:intergenic
TTTGAGGGATTTGAAAATTT+GGG 0.322072 4_3:+15760505 Msa0632130:CDS
AGGAATGGGGCAATGGGTTA+AGG 0.323161 4_3:-15756521 None:intergenic
GACTTACACTAAAGATTTGC+AGG 0.324033 4_3:+15760932 Msa0632130:CDS
TAGGCCGCCACATGGACTTC+TGG 0.327048 4_3:-15760968 None:intergenic
GAAGCGCACCATGTTTGAAT+TGG 0.327189 4_3:-15758707 None:intergenic
TGTTTGCCCCAGGCAATATC+AGG 0.327849 4_3:-15759189 None:intergenic
GTTCCATATTTCTACATCTT+CGG 0.333336 4_3:-15759738 None:intergenic
TAATGATACATAACGAATAA+TGG 0.337904 4_3:-15761135 None:intergenic
ATCCTCCTTGGTAGCTTCCT+CGG 0.338678 4_3:-15757719 None:intergenic
GAACGAACGAAGAAAGAAAA+AGG 0.343097 4_3:-15756682 None:intergenic
ATGGACATGAGATCAGTTTA+TGG 0.344407 4_3:+15760374 Msa0632130:CDS
ATGATTGATAGTTGAGGTTC+TGG 0.346250 4_3:+15761297 Msa0632130:three_prime_UTR
CAGAATTGGGTGAAAGTTAC+AGG 0.346425 4_3:+15758654 Msa0632130:CDS
TTCCATATTTCTACATCTTC+GGG 0.348032 4_3:-15759737 None:intergenic
GACTGAGCAAATCACCTTAC+TGG 0.348700 4_3:+15760213 Msa0632130:CDS
CTAATGAGCTACTCCCTTCT+GGG 0.351886 4_3:+15758184 Msa0632130:CDS
GATTCAAACGATAATAAATC+TGG 0.353226 4_3:+15758015 Msa0632130:CDS
CTCTATGCTTGGTTGGGCTA+TGG 0.353786 4_3:+15757551 Msa0632130:CDS
TCGGGCAGCTTCTGATAAAT+AGG 0.357067 4_3:-15759719 None:intergenic
GACCTGGTGGTTTCTTTGTA+TGG 0.360085 4_3:+15759687 Msa0632130:CDS
AGTCTTTCTGGCCACTCCCC+TGG 0.363157 4_3:-15760194 None:intergenic
CTGTAGTTGCCGAGGTTGAT+AGG 0.364325 4_3:+15760811 Msa0632130:CDS
CCACGTTCTGTCGAACTAAC+TGG 0.372630 4_3:-15760161 None:intergenic
ATTTATGAACGTGGTCTGTT+TGG 0.379065 4_3:+15760572 Msa0632130:CDS
GATGACATCGTCTGTAGTTC+CGG 0.379624 4_3:+15757576 Msa0632130:CDS
AATGAAACTACAACTCAAAC+TGG 0.386627 4_3:+15758225 Msa0632130:CDS
ATTGGGCGTTTATATCCTTC+AGG 0.393045 4_3:-15758474 None:intergenic
CCAGGTTTGCAGCAGCTTTG+AGG 0.393982 4_3:+15760489 Msa0632130:intron
TGATCAGCAGTAAAATCTTC+AGG 0.398020 4_3:-15760275 None:intergenic
GATGAGAGCAATAACAAATC+TGG 0.398080 4_3:+15757913 Msa0632130:CDS
AGCAATCTACCGGGTTCAAT+TGG 0.400598 4_3:+15758307 Msa0632130:CDS
GATGAGAGCAATAACAAATC+TGG 0.403002 4_3:+15757886 Msa0632130:CDS
TAAAATCACCTAACTCTTGT+TGG 0.404507 4_3:-15761078 None:intergenic
GTAACATGGTGCCGTAGTTA+AGG 0.404794 4_3:+15761237 Msa0632130:three_prime_UTR
CAGGTTTGCAGCAGCTTTGA+GGG 0.405138 4_3:+15760490 Msa0632130:intron
GGATGCGGCGTTGCCAGCTT+TGG 0.406344 4_3:+15759234 Msa0632130:CDS
AGATGCAAGTGAAAATAAAA+AGG 0.406679 4_3:+15758041 Msa0632130:CDS
TGGTTATCAAATTCTGAAGT+TGG 0.407557 4_3:+15760233 Msa0632130:CDS
CATGTGGCGGCCTACAGAAT+TGG 0.409128 4_3:+15760977 Msa0632130:CDS
CACTAAGCTTGCTGAATACA+AGG 0.413110 4_3:+15758626 Msa0632130:CDS
TGCCCGAAGATGTAGAAATA+TGG 0.415143 4_3:+15759735 Msa0632130:CDS
AAATATATTTACCTGTTGTA+TGG 0.415427 4_3:-15758742 None:intergenic
TCTTCAGGAGACTTATCTTC+AGG 0.416574 4_3:-15757811 None:intergenic
TATGTCATCTTGGTATCTTC+AGG 0.418811 4_3:-15757826 None:intergenic
AGGCAGGTAGGAGGATCTTC+AGG 0.419164 4_3:-15758441 None:intergenic
TTGGGTAATGAATGTCGTTC+CGG 0.420730 4_3:+15760523 Msa0632130:CDS
AAGCGCACCATGTTTGAATT+GGG 0.421782 4_3:-15758706 None:intergenic
TCAAGGCATGGAATGTAGTC+AGG 0.422263 4_3:-15758354 None:intergenic
CCCTGTTATGCCCGGAAAGC+AGG 0.423452 4_3:+15757768 Msa0632130:CDS
TTTGTTGCTCTATGCTTGGT+TGG 0.424129 4_3:+15757544 Msa0632130:CDS
AGACACTGCTGAGACCATTA+AGG 0.424525 4_3:+15760866 Msa0632130:CDS
GTCTGTACCTGATATTGCCT+GGG 0.424607 4_3:+15759182 Msa0632130:intron
CTTAGCATTGTTATCCTCCT+TGG 0.425739 4_3:-15757731 None:intergenic
TCCTCCTTGGTAGCTTCCTC+GGG 0.425882 4_3:-15757718 None:intergenic
GGTCACAATGGCCAGGGGAG+TGG 0.427651 4_3:+15760183 Msa0632130:CDS
ATACTCTACTGTCTCGAATT+CGG 0.430578 4_3:-15761029 None:intergenic
TTGTTGCTCTATGCTTGGTT+GGG 0.432621 4_3:+15757545 Msa0632130:CDS
GGAATGGGGCAATGGGTTAA+GGG 0.433944 4_3:-15756520 None:intergenic
TAGACCTTTCATCGGACTCT+TGG 0.434605 4_3:-15758122 None:intergenic
GGTACAATTTGCACTTGAAA+GGG 0.436429 4_3:+15759323 Msa0632130:CDS
GAATGTGATGGGAAAGGAAT+GGG 0.439633 4_3:-15756535 None:intergenic
TCAGAAGTTTGAAGATAAGA+AGG 0.440496 4_3:+15757687 Msa0632130:CDS
AGTCTGTACCTGATATTGCC+TGG 0.440752 4_3:+15759181 Msa0632130:intron
ATGGGAAAGGAATGGGGCAA+TGG 0.440864 4_3:-15756528 None:intergenic
ACAGAGCGAGGTGAAGAATC+AGG 0.442429 4_3:+15757639 Msa0632130:CDS
GAGAAATGAAATCTTGAATT+GGG 0.443254 4_3:-15756657 None:intergenic
TTGGTGGGGTAAAGTTGATA+GGG 0.443355 4_3:-15756591 None:intergenic
TGGGAAAGGAATGGGGCAAT+GGG 0.443469 4_3:-15756527 None:intergenic
ATGAGATGCCAACAAGAGTT+AGG 0.444426 4_3:+15761070 Msa0632130:three_prime_UTR
ATGGCATCAAATACTCTAGC+AGG 0.448584 4_3:-15759393 None:intergenic
AAAGAGAAAGCCACCAAAGC+TGG 0.449809 4_3:-15759247 None:intergenic
GGGCAATGGGTTAAGGGAAA+AGG 0.450141 4_3:-15756514 None:intergenic
TGTGTTTGTTGCTCTATGCT+TGG 0.454286 4_3:+15757540 Msa0632130:CDS
AGATAGTAAGACAGAAGAAA+AGG 0.454824 4_3:+15758083 Msa0632130:CDS
AGGGATAAACTTAATAAAGT+TGG 0.455976 4_3:+15759897 Msa0632130:CDS
TCATAGTCTTGACATATAGA+AGG 0.456886 4_3:-15759981 None:intergenic
TAAATAATTGGAAGTGTGTC+CGG 0.459194 4_3:-15760554 None:intergenic
TCCATGCCTTGACAACTTGA+AGG 0.459542 4_3:+15758365 Msa0632130:CDS
CGGAAAGCAGGAAGAGAAAT+CGG 0.459697 4_3:+15757780 Msa0632130:CDS
TCATAACACTCATTAGAAGT+TGG 0.460853 4_3:-15759939 None:intergenic
TGGATCAGTATATGTCATCT+TGG 0.462212 4_3:-15757836 None:intergenic
TGTAGGTGGCAAACTTCTCT+TGG 0.463244 4_3:+15759646 Msa0632130:intron
TCCTGCTATATCTGCTGTGA+TGG 0.463748 4_3:+15759350 Msa0632130:CDS
ATACAAGGGGCACCAGAATT+GGG 0.464985 4_3:+15758641 Msa0632130:CDS
TTTCTCGCTCTCATCAGAAT+CGG 0.465423 4_3:-15757986 None:intergenic
TAATATTGATCACCACTGTA+TGG 0.467385 4_3:+15761196 Msa0632130:three_prime_UTR
TGCGGCGTTGCCAGCTTTGG+TGG 0.467886 4_3:+15759237 Msa0632130:CDS
CTTCTGAGGATTGCTATTAG+TGG 0.470869 4_3:-15757671 None:intergenic
TGTCCAAGTCTTATCTAAAT+GGG 0.471066 4_3:+15760318 Msa0632130:CDS
AGGTACAATTTGCACTTGAA+AGG 0.472614 4_3:+15759322 Msa0632130:CDS
TTACATTGACACCATACAAC+AGG 0.472893 4_3:+15758731 Msa0632130:CDS
TGTTTGGCATATATCATGAT+TGG 0.477645 4_3:+15760588 Msa0632130:CDS
CTCTAACAAAAGCAATGTGT+TGG 0.477646 4_3:+15759856 Msa0632130:CDS
TTGACAACTTGAAGGCGATT+CGG 0.478459 4_3:+15758373 Msa0632130:CDS
GCAGTAAAATCTTCAGGAGC+AGG 0.479751 4_3:-15760269 None:intergenic
TCAGAATTTGATAACCAGTA+AGG 0.480321 4_3:-15760227 None:intergenic
GGGAAGTGGTGTCTATCAGC+AGG 0.480892 4_3:+15759877 Msa0632130:CDS
CATTAAGGAGCTGGAGAGCT+TGG 0.481031 4_3:+15760881 Msa0632130:CDS
CACACGTGTTTGTTTGCCCC+AGG 0.482612 4_3:-15759199 None:intergenic
ATTGAACCCGGTAGATTGCT+TGG 0.487643 4_3:-15758304 None:intergenic
AACACTATGAACACAGAGAA+AGG 0.487854 4_3:+15758412 Msa0632130:CDS
GAACAAGAAGACATCTGATT+CGG 0.493963 4_3:+15757864 Msa0632130:CDS
GAGACAGTAGAGTATGCTAT+TGG 0.494819 4_3:+15760999 Msa0632130:CDS
CTTCTCACTCTCATCAGAAT+CGG 0.495820 4_3:-15757959 None:intergenic
AAATCCTCCAAGCAATCTAC+CGG 0.500678 4_3:+15758297 Msa0632130:CDS
CCGAGGTTGATAGGATTCTC+AGG 0.501423 4_3:+15760820 Msa0632130:CDS
ATCAAATACTCTAGCAGGGA+AGG 0.501685 4_3:-15759388 None:intergenic
TCTACAGCGTGCACAATGAA+TGG 0.504753 4_3:-15759412 None:intergenic
AGAGTTCCGTGGCATATAGA+AGG 0.507563 4_3:+15759432 Msa0632130:CDS
TTGAATTGGGTTCCACCACC+AGG 0.509928 4_3:-15758693 None:intergenic
TGCTGAGACCATTAAGGAGC+TGG 0.513322 4_3:+15760872 Msa0632130:CDS
GAACGTGGGTCACAATGGCC+AGG 0.519506 4_3:+15760176 Msa0632130:CDS
TCTAACAAAAGCAATGTGTT+GGG 0.523325 4_3:+15759857 Msa0632130:CDS
ATCTGCATGAAGTAGATCAT+AGG 0.524703 4_3:-15760639 None:intergenic
AAGAAACAGAGACCAAAGAA+AGG 0.526718 4_3:-15756463 None:intergenic
CCTGCTTTCCGGGCATAACA+GGG 0.529227 4_3:-15757768 None:intergenic
TGTCGTTCCGGTAGACTCAC+CGG 0.531879 4_3:+15760535 Msa0632130:CDS
TTCTTATCTTCAAACTTCTG+AGG 0.533134 4_3:-15757685 None:intergenic
AAAAGATGAACATGAAGCTC+AGG 0.533172 4_3:+15759302 Msa0632130:CDS
GCCTTCAAGTTGTCAAGGCA+TGG 0.539567 4_3:-15758366 None:intergenic
TTCAGGAAGAGCGACAAGGC+AGG 0.541534 4_3:-15758457 None:intergenic
AAGTCTTATCTAAATGGGAT+TGG 0.544074 4_3:+15760323 Msa0632130:CDS
TCTTGAATTGGGATGGTGAA+AGG 0.545219 4_3:-15756646 None:intergenic
TGCCTTGTCGCTCTTCCTGA+AGG 0.545666 4_3:+15758459 Msa0632130:CDS
GATATAAACGCCCAATCGAA+TGG 0.547059 4_3:+15758481 Msa0632130:CDS
AAAAGCAATGTGTTGGGAAG+TGG 0.548445 4_3:+15759863 Msa0632130:CDS
AATCCCATTTAGATAAGACT+TGG 0.550835 4_3:-15760321 None:intergenic
TTTCATTCAGAAGCTCTGAC+TGG 0.555443 4_3:-15758209 None:intergenic
GACCCCGTCTACAGAAATGA+AGG 0.557235 4_3:+15759833 Msa0632130:intron
CTTCTCATTAGACCTTTCAT+CGG 0.557553 4_3:-15758130 None:intergenic
TTGTGCATGCAACTTTGCAA+TGG 0.557899 4_3:-15760134 None:intergenic
GCATGGAATGTAGTCAGGGC+CGG 0.560863 4_3:-15758349 None:intergenic
GTCCATGACATTGCGCACAT+TGG 0.560985 4_3:-15760357 None:intergenic
TATTGAAAATTGAATGTGAT+GGG 0.561369 4_3:-15756546 None:intergenic
GAAAACAACCCTGTTATGCC+CGG 0.562365 4_3:+15757760 Msa0632130:CDS
TAATGGTCTCAGCAGTGTCT+CGG 0.565162 4_3:-15760863 None:intergenic
TTCCACCACCAGGAAAAGTA+AGG 0.565768 4_3:-15758683 None:intergenic
CCAGTTAGTTCGACAGAACG+TGG 0.567966 4_3:+15760161 Msa0632130:CDS
GATAGGATTCTCAGGCCTGA+GGG 0.568699 4_3:+15760828 Msa0632130:CDS
CAGAAGTTTGAAGATAAGAA+GGG 0.569315 4_3:+15757688 Msa0632130:CDS
CCTGCTATATCTGCTGTGAT+GGG 0.569858 4_3:+15759351 Msa0632130:CDS
CTTCCAATTATTTATGAACG+TGG 0.571347 4_3:+15760563 Msa0632130:CDS
AACGTGGGTCACAATGGCCA+GGG 0.572813 4_3:+15760177 Msa0632130:CDS
CCCATCACAGCAGATATAGC+AGG 0.575073 4_3:-15759351 None:intergenic
GTCCAATGTGCGCAATGTCA+TGG 0.576181 4_3:+15760355 Msa0632130:CDS
TGAATGTGATGGGAAAGGAA+TGG 0.576553 4_3:-15756536 None:intergenic
GAACCCGGTAGATTGCTTGG+AGG 0.577245 4_3:-15758301 None:intergenic
TTAAGGGAAAAGGATGAAGA+AGG 0.578727 4_3:-15756504 None:intergenic
ACTTACACTAAAGATTTGCA+GGG 0.585635 4_3:+15760933 Msa0632130:CDS
ATGAAGTAGATCATAGGACC+TGG 0.586094 4_3:-15760633 None:intergenic
TAATGAGCTACTCCCTTCTG+GGG 0.587270 4_3:+15758185 Msa0632130:CDS
CCATGTTGTCACTTATCAAA+AGG 0.588599 4_3:-15757447 None:intergenic
AGGATGAAGAAGGATAGAGT+TGG 0.589002 4_3:-15756494 None:intergenic
TGATCAGAATTCCTTAACTA+CGG 0.590344 4_3:-15761248 None:intergenic
AATGTGATGGGAAAGGAATG+GGG 0.590504 4_3:-15756534 None:intergenic
AATGAAATCTTGAATTGGGA+TGG 0.593099 4_3:-15756653 None:intergenic
CAATTCTGTAGGCCGCCACA+TGG 0.593696 4_3:-15760976 None:intergenic
CTTTGGATGATTGATAGTTG+AGG 0.594228 4_3:+15761291 Msa0632130:three_prime_UTR
CTTGGTGACATCTATGCAGT+GGG 0.597887 4_3:+15760899 Msa0632130:CDS
GAATCGCCTTCAAGTTGTCA+AGG 0.598521 4_3:-15758371 None:intergenic
ATGATGATCCTAATGCCGCC+TGG 0.598814 4_3:+15760000 Msa0632130:CDS
AAAATTGAATGTGATGGGAA+AGG 0.600447 4_3:-15756541 None:intergenic
GGAGTAGCTCATTAGAACCC+TGG 0.600496 4_3:-15758176 None:intergenic
AGAGCGACAAGGCAGGTAGG+AGG 0.606982 4_3:-15758450 None:intergenic
TTACTGCTGATCATGAACAC+TGG 0.609094 4_3:+15760285 Msa0632130:CDS
CGGACAATAAGCTTTCCCTC+AGG 0.610538 4_3:-15760843 None:intergenic
AGTGTGTCCGGTGAGTCTAC+CGG 0.613797 4_3:-15760542 None:intergenic
AAGCTTAGTGTGTGGAACGT+TGG 0.614215 4_3:-15758613 None:intergenic
GGAAGAGCGACAAGGCAGGT+AGG 0.614855 4_3:-15758453 None:intergenic
TGTTGTCACTTATCAAAAGG+TGG 0.616743 4_3:-15757444 None:intergenic
AAACTCTGCAATGTCACTGC+CGG 0.617134 4_3:+15758330 Msa0632130:CDS
GAAATACCTTCTATATGCCA+CGG 0.618360 4_3:-15759438 None:intergenic
TCTACTGTCTCCAATTCTGT+AGG 0.618641 4_3:-15760987 None:intergenic
ACACGTGTGATATTGGATGT+TGG 0.619996 4_3:+15759213 Msa0632130:CDS
GCTTGGTGACATCTATGCAG+TGG 0.621238 4_3:+15760898 Msa0632130:CDS
GACATGAGATCAGTTTATGG+AGG 0.624346 4_3:+15760377 Msa0632130:CDS
ACTAAGCTTGCTGAATACAA+GGG 0.624777 4_3:+15758627 Msa0632130:CDS
TATTCAGCAAGCTTAGTGTG+TGG 0.626139 4_3:-15758621 None:intergenic
ATGGCCCAAAAGCAGAGAGA+AGG 0.626143 4_3:+15758500 Msa0632130:CDS
GTTTGAAGCTGTAGTTGCCG+AGG 0.628136 4_3:+15760803 Msa0632130:CDS
TGATAGGATTCTCAGGCCTG+AGG 0.629871 4_3:+15760827 Msa0632130:CDS
GGTGACATCTATGCAGTGGG+AGG 0.630863 4_3:+15760902 Msa0632130:CDS
TCAAATACTCTAGCAGGGAA+GGG 0.631133 4_3:-15759387 None:intergenic
GTACAATTTGCACTTGAAAG+GGG 0.633712 4_3:+15759324 Msa0632130:CDS
CCTGAGAATCCTATCAACCT+CGG 0.634465 4_3:-15760820 None:intergenic
CGACAGAACGTGGGTCACAA+TGG 0.634623 4_3:+15760171 Msa0632130:CDS
GTGATATTGGATGTTGGATG+CGG 0.635039 4_3:+15759219 Msa0632130:CDS
GACCATACAAAGAAACCACC+AGG 0.636775 4_3:-15759689 None:intergenic
TCTGCCCGAGGAAGCTACCA+AGG 0.636962 4_3:+15757714 Msa0632130:CDS
CTGCTGTGATGGGCACAAAG+AGG 0.637182 4_3:+15759361 Msa0632130:CDS
GCAGAGTTTCCAATTGAACC+CGG 0.637837 4_3:-15758316 None:intergenic
ACCGTTGAGCAGTAACTCGA+CGG 0.639254 4_3:-15757508 None:intergenic
ATATTGAAAATTGAATGTGA+TGG 0.640293 4_3:-15756547 None:intergenic
CAAGGCATGGAATGTAGTCA+GGG 0.640525 4_3:-15758353 None:intergenic
TGGCATCAAATACTCTAGCA+GGG 0.641803 4_3:-15759392 None:intergenic
TAAATGGGATTGGCATTCAG+TGG 0.645780 4_3:+15760333 Msa0632130:CDS
GTAACCAAGAGTCCGATGAA+AGG 0.646102 4_3:+15758118 Msa0632130:CDS
AATCATTTAGCACATATCCC+AGG 0.649524 4_3:+15760615 Msa0632130:CDS
ACATGAGATCAGTTTATGGA+GGG 0.652022 4_3:+15760378 Msa0632130:CDS
TGAAGTAGATCATAGGACCT+GGG 0.654597 4_3:-15760632 None:intergenic
CTAAGCTTGCTGAATACAAG+GGG 0.655529 4_3:+15758628 Msa0632130:CDS
ATCCTTCAGGAAGAGCGACA+AGG 0.657623 4_3:-15758461 None:intergenic
TCCGTCGAGTTACTGCTCAA+CGG 0.657836 4_3:+15757507 Msa0632130:CDS
ACGTGGGTCACAATGGCCAG+GGG 0.659025 4_3:+15760178 Msa0632130:CDS
AGAAACAAGCTTCCATACAG+TGG 0.659895 4_3:-15761208 None:intergenic
GAATAGTTATCTCTGCATTG+TGG 0.661597 4_3:-15756721 None:intergenic
AATCCTCCAAGCAATCTACC+GGG 0.661733 4_3:+15758298 Msa0632130:CDS
TGAGGTGAAAGGACAGAGCG+AGG 0.662207 4_3:+15757627 Msa0632130:CDS
AATGAGCTACTCCCTTCTGG+GGG 0.663250 4_3:+15758186 Msa0632130:CDS
TTGAATAGAGTATTGCGACC+TGG 0.667810 4_3:+15759671 Msa0632130:CDS
GTGTCCAGAAGTCCATGTGG+CGG 0.672312 4_3:+15760964 Msa0632130:CDS
GGAAGTGGTGTCTATCAGCA+GGG 0.674006 4_3:+15759878 Msa0632130:CDS
TGATACATAACGAATAATGG+AGG 0.676175 4_3:-15761132 None:intergenic
GTGCACGCTGTAGAGTTCCG+TGG 0.676281 4_3:+15759421 Msa0632130:CDS
AATAGAGTATTGCGACCTGG+TGG 0.685656 4_3:+15759674 Msa0632130:CDS
GAAGATGTAGAAATATGGAA+CGG 0.686612 4_3:+15759740 Msa0632130:CDS
GAAGAAAAGGCAGATCAAAG+TGG 0.688007 4_3:+15758096 Msa0632130:CDS
TCTGTACCTGATATTGCCTG+GGG 0.689283 4_3:+15759183 Msa0632130:CDS
CAGTTAGTTCGACAGAACGT+GGG 0.696778 4_3:+15760162 Msa0632130:CDS
GGTGTTTCACGGATTCTATG+CGG 0.701593 4_3:+15756406 None:intergenic
CAGAGACTAGGAGAGAGTGA+CGG 0.708417 4_3:-15756429 None:intergenic
TAAGAAGGGAGATCTGCCCG+AGG 0.713293 4_3:+15757702 Msa0632130:CDS
GGTGGAACCCAATTCAAACA+TGG 0.718496 4_3:+15758699 Msa0632130:CDS
TTGTGGTGTTGTAACGCATG+AGG 0.719024 4_3:-15756704 None:intergenic
GCCCGAGGAAGCTACCAAGG+AGG 0.738197 4_3:+15757717 Msa0632130:CDS
TATGTGTCCAGAAGTCCATG+TGG 0.749324 4_3:+15760961 Msa0632130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCTAATTAAAATTCAATTT+TGG + chr4_3:15758943-15758962 Msa0632130:intron 10.0%
!! TTAAAAATAAAAACAGAAAA+AGG + chr4_3:15760060-15760079 Msa0632130:intron 10.0%
!!! AATCACAAATTTTATATGAT+TGG + chr4_3:15757303-15757322 Msa0632130:intron 15.0%
!! ATGTATTATGGATTTAATTA+TGG - chr4_3:15758811-15758830 None:intergenic 15.0%
!!! ATTGAATTTTAATTAGAACT+AGG - chr4_3:15758941-15758960 None:intergenic 15.0%
!! TATTGAAAATTGAATGTGAT+GGG - chr4_3:15756549-15756568 None:intergenic 20.0%
!! ATATTGAAAATTGAATGTGA+TGG - chr4_3:15756550-15756569 None:intergenic 20.0%
!!! CTTTAATTTTCCTTAATTCA+TGG - chr4_3:15757254-15757273 None:intergenic 20.0%
!! CAAAAACCTAGTTATATATA+TGG + chr4_3:15757278-15757297 Msa0632130:intron 20.0%
!! AAATATATTTACCTGTTGTA+TGG - chr4_3:15758745-15758764 None:intergenic 20.0%
!! TTGGAAGATATAATTCAAAA+TGG + chr4_3:15758962-15758981 Msa0632130:intron 20.0%
!! CAAAATGGAAACATAATATT+TGG + chr4_3:15758977-15758996 Msa0632130:intron 20.0%
!! AAATCTTCAAACAAGTAATT+AGG - chr4_3:15759004-15759023 None:intergenic 20.0%
!!! TACTTGTTTGAAGATTTTTA+TGG + chr4_3:15759007-15759026 Msa0632130:intron 20.0%
!!! GAATATTTTTTCCTAAACAT+TGG - chr4_3:15759033-15759052 None:intergenic 20.0%
!! TATAATCCATGTAAATAAAC+TGG + chr4_3:15759588-15759607 Msa0632130:intron 20.0%
!! AATTAAATTCAGAGTAACAT+TGG - chr4_3:15760423-15760442 None:intergenic 20.0%
!! TAATGATACATAACGAATAA+TGG - chr4_3:15761138-15761157 None:intergenic 20.0%
!!! TTGTTTCTTTTTTTGTAACA+TGG + chr4_3:15761223-15761242 Msa0632130:three_prime_UTR 20.0%
!!! ACAAAACTAATACCAAATTT+TGG - chr4_3:15761343-15761362 None:intergenic 20.0%
!! TATACGAAAGATGATGATTT+TGG - chr4_3:15756613-15756632 None:intergenic 25.0%
! GAGAAATGAAATCTTGAATT+GGG - chr4_3:15756660-15756679 None:intergenic 25.0%
! TGAGAAATGAAATCTTGAAT+TGG - chr4_3:15756661-15756680 None:intergenic 25.0%
! GGAAAAGTGAAATGAATAAA+AGG - chr4_3:15756847-15756866 None:intergenic 25.0%
! TACATGACATATATCACTAA+TGG - chr4_3:15757063-15757082 None:intergenic 25.0%
! GATTCACCATATATATAACT+AGG - chr4_3:15757287-15757306 None:intergenic 25.0%
! GATTCAAACGATAATAAATC+TGG + chr4_3:15758015-15758034 Msa0632130:CDS 25.0%
! AGATGCAAGTGAAAATAAAA+AGG + chr4_3:15758041-15758060 Msa0632130:CDS 25.0%
!!! CATAGTGTTTAGTAGTTTTA+AGG - chr4_3:15758401-15758420 None:intergenic 25.0%
!! GCTTTGTCAATTTTCATTAT+TGG + chr4_3:15758540-15758559 Msa0632130:intron 25.0%
! AAAATGTTCTCTTTCAGATA+TGG + chr4_3:15758586-15758605 Msa0632130:intron 25.0%
! AACATTAGAACAAACACATA+CGG - chr4_3:15758788-15758807 None:intergenic 25.0%
! CATCTAGTTATACAATCTAA+GGG + chr4_3:15759053-15759072 Msa0632130:intron 25.0%
!! AATGTGGTTAGATGAAATTT+TGG + chr4_3:15759493-15759512 Msa0632130:intron 25.0%
!! ACAAGCTTGAAATTTTTATG+CGG + chr4_3:15759520-15759539 Msa0632130:intron 25.0%
! TAAAAGCCAGTTTATTTACA+TGG - chr4_3:15759597-15759616 None:intergenic 25.0%
!!! TAAACTGGCTTTTATGATTT+TGG + chr4_3:15759603-15759622 Msa0632130:intron 25.0%
! AGGGATAAACTTAATAAAGT+TGG + chr4_3:15759897-15759916 Msa0632130:CDS 25.0%
! TTTGAGGGATTTGAAAATTT+GGG + chr4_3:15760505-15760524 Msa0632130:CDS 25.0%
!! TGTTTTCAAAGCTTAAGAAA+AGG + chr4_3:15760666-15760685 Msa0632130:CDS 25.0%
! TACATTTACCAACAAAAACT+TGG + chr4_3:15760713-15760732 Msa0632130:intron 25.0%
! TATTCTTGACTACCAAAATT+TGG + chr4_3:15761328-15761347 Msa0632130:three_prime_UTR 25.0%
!!! GTTTTTTTCGTTCCTTTCTT+TGG + chr4_3:15756451-15756470 Msa0632130:five_prime_UTR 30.0%
! AAAATTGAATGTGATGGGAA+AGG - chr4_3:15756544-15756563 None:intergenic 30.0%
AATGAAATCTTGAATTGGGA+TGG - chr4_3:15756656-15756675 None:intergenic 30.0%
AGATCTGCTTCTTTCATAAT+AGG + chr4_3:15756750-15756769 Msa0632130:five_prime_UTR 30.0%
TAGATGCATAGAATAAAACG+TGG - chr4_3:15756873-15756892 None:intergenic 30.0%
TTAAGCGATCAATCAAGAAA+CGG - chr4_3:15756901-15756920 None:intergenic 30.0%
TAGCAGATCTAATAGATTGA+TGG - chr4_3:15757016-15757035 None:intergenic 30.0%
! GACATATATCACTAATGGAT+TGG - chr4_3:15757058-15757077 None:intergenic 30.0%
GTGTTTCTTGAATGATATCA+TGG + chr4_3:15757218-15757237 Msa0632130:intron 30.0%
TCTTGAATGATATCATGGTT+TGG + chr4_3:15757223-15757242 Msa0632130:intron 30.0%
AGATGAGTCGAATAAAAATG+AGG + chr4_3:15757609-15757628 Msa0632130:CDS 30.0%
TCGAATAAAAATGAGGTGAA+AGG + chr4_3:15757616-15757635 Msa0632130:CDS 30.0%
TTCTTATCTTCAAACTTCTG+AGG - chr4_3:15757688-15757707 None:intergenic 30.0%
TCAGAAGTTTGAAGATAAGA+AGG + chr4_3:15757687-15757706 Msa0632130:CDS 30.0%
CAGAAGTTTGAAGATAAGAA+GGG + chr4_3:15757688-15757707 Msa0632130:CDS 30.0%
AGATAGTAAGACAGAAGAAA+AGG + chr4_3:15758083-15758102 Msa0632130:CDS 30.0%
AGATGAAAATACCAAAAACC+AGG + chr4_3:15758158-15758177 Msa0632130:CDS 30.0%
GATGAAAATACCAAAAACCA+GGG + chr4_3:15758159-15758178 Msa0632130:CDS 30.0%
AATGAAACTACAACTCAAAC+TGG + chr4_3:15758225-15758244 Msa0632130:CDS 30.0%
! AGAGAAGGTACAAATAAATC+AGG + chr4_3:15758515-15758534 Msa0632130:intron 30.0%
AACTGACAGTACATGTATTA+TGG - chr4_3:15758823-15758842 None:intergenic 30.0%
! GATTTTTATGGCCAATGTTT+AGG + chr4_3:15759019-15759038 Msa0632130:intron 30.0%
CCTTAGATTGTATAACTAGA+TGG - chr4_3:15759055-15759074 None:intergenic 30.0%
CCATCTAGTTATACAATCTA+AGG + chr4_3:15759052-15759071 Msa0632130:intron 30.0%
! TTCCATATTTCTACATCTTC+GGG - chr4_3:15759740-15759759 None:intergenic 30.0%
! GTTCCATATTTCTACATCTT+CGG - chr4_3:15759741-15759760 None:intergenic 30.0%
GAAGATGTAGAAATATGGAA+CGG + chr4_3:15759740-15759759 Msa0632130:CDS 30.0%
!! ACTATTAAGCGTTTCAAGTT+TGG + chr4_3:15759789-15759808 Msa0632130:intron 30.0%
TCTAACAAAAGCAATGTGTT+GGG + chr4_3:15759857-15759876 Msa0632130:CDS 30.0%
TCATAACACTCATTAGAAGT+TGG - chr4_3:15759942-15759961 None:intergenic 30.0%
! TCATAGTCTTGACATATAGA+AGG - chr4_3:15759984-15760003 None:intergenic 30.0%
TCAGTAAAGGAAAAAATACC+AGG - chr4_3:15760021-15760040 None:intergenic 30.0%
!!! AAAACAGAAAAAGGCGTTTT+TGG + chr4_3:15760069-15760088 Msa0632130:intron 30.0%
! TCAGAATTTGATAACCAGTA+AGG - chr4_3:15760230-15760249 None:intergenic 30.0%
!! TGGTTATCAAATTCTGAAGT+TGG + chr4_3:15760233-15760252 Msa0632130:CDS 30.0%
!! AATTCTGAAGTTGGAGTTTA+TGG + chr4_3:15760242-15760261 Msa0632130:CDS 30.0%
! TGTCCAAGTCTTATCTAAAT+GGG + chr4_3:15760318-15760337 Msa0632130:CDS 30.0%
AATCCCATTTAGATAAGACT+TGG - chr4_3:15760324-15760343 None:intergenic 30.0%
! AAGTCTTATCTAAATGGGAT+TGG + chr4_3:15760323-15760342 Msa0632130:CDS 30.0%
! CTTTGAGGGATTTGAAAATT+TGG + chr4_3:15760504-15760523 Msa0632130:CDS 30.0%
! TAAATAATTGGAAGTGTGTC+CGG - chr4_3:15760557-15760576 None:intergenic 30.0%
CTTCCAATTATTTATGAACG+TGG + chr4_3:15760563-15760582 Msa0632130:CDS 30.0%
AGACCACGTTCATAAATAAT+TGG - chr4_3:15760569-15760588 None:intergenic 30.0%
TGTTTGGCATATATCATGAT+TGG + chr4_3:15760588-15760607 Msa0632130:CDS 30.0%
! CTGAAAAACCAAGTTTTTGT+TGG - chr4_3:15760724-15760743 None:intergenic 30.0%
!! CAAAAACTTGGTTTTTCAGA+AGG + chr4_3:15760725-15760744 Msa0632130:intron 30.0%
!!! TCATTTTGAAACGTTGTTTG+TGG + chr4_3:15760769-15760788 Msa0632130:intron 30.0%
ACTTACACTAAAGATTTGCA+GGG + chr4_3:15760933-15760952 Msa0632130:CDS 30.0%
TAAAATCACCTAACTCTTGT+TGG - chr4_3:15761081-15761100 None:intergenic 30.0%
! AACAAGAGTTAGGTGATTTT+AGG + chr4_3:15761080-15761099 Msa0632130:three_prime_UTR 30.0%
! ACAAGAGTTAGGTGATTTTA+GGG + chr4_3:15761081-15761100 Msa0632130:three_prime_UTR 30.0%
TGATACATAACGAATAATGG+AGG - chr4_3:15761135-15761154 None:intergenic 30.0%
TAATATTGATCACCACTGTA+TGG + chr4_3:15761196-15761215 Msa0632130:three_prime_UTR 30.0%
TGATCAGAATTCCTTAACTA+CGG - chr4_3:15761251-15761270 None:intergenic 30.0%
! TCACATTCTTGGAATTTTAG+AGG + chr4_3:15761268-15761287 Msa0632130:three_prime_UTR 30.0%
GAACGAAAAAAACAGAGACT+AGG - chr4_3:15756444-15756463 None:intergenic 35.0%
AAGAAACAGAGACCAAAGAA+AGG - chr4_3:15756466-15756485 None:intergenic 35.0%
TTAAGGGAAAAGGATGAAGA+AGG - chr4_3:15756507-15756526 None:intergenic 35.0%
!! GAAAGATGATGATTTTGGTG+GGG - chr4_3:15756608-15756627 None:intergenic 35.0%
!! CGAAAGATGATGATTTTGGT+GGG - chr4_3:15756609-15756628 None:intergenic 35.0%
! ACGAAAGATGATGATTTTGG+TGG - chr4_3:15756610-15756629 None:intergenic 35.0%
GAACGAACGAAGAAAGAAAA+AGG - chr4_3:15756685-15756704 None:intergenic 35.0%
GAATAGTTATCTCTGCATTG+TGG - chr4_3:15756724-15756743 None:intergenic 35.0%
AGAAGTGGATAAATGTGTGA+AGG - chr4_3:15756808-15756827 None:intergenic 35.0%
GCATAGAATAAAACGTGGAA+AGG - chr4_3:15756868-15756887 None:intergenic 35.0%
!! ATGGATTGGACGCATTATTA+AGG - chr4_3:15757044-15757063 None:intergenic 35.0%
!! ACTTTTGATTGAAGCGTGTT+CGG + chr4_3:15757091-15757110 Msa0632130:intron 35.0%
TTTGGCAATGCCATGAATTA+AGG + chr4_3:15757241-15757260 Msa0632130:intron 35.0%
GCAGAATACTGAAGAATCTT+TGG - chr4_3:15757346-15757365 None:intergenic 35.0%
! GCATTCGATTTTCAACATTG+TGG + chr4_3:15757364-15757383 Msa0632130:intron 35.0%
! TCGATTTTCAACATTGTGGA+TGG + chr4_3:15757368-15757387 Msa0632130:intron 35.0%
! TGTTGTCACTTATCAAAAGG+TGG - chr4_3:15757447-15757466 None:intergenic 35.0%
! CCATGTTGTCACTTATCAAA+AGG - chr4_3:15757450-15757469 None:intergenic 35.0%
! CCTTTTGATAAGTGACAACA+TGG + chr4_3:15757447-15757466 Msa0632130:exon 35.0%
TATGTCATCTTGGTATCTTC+AGG - chr4_3:15757829-15757848 None:intergenic 35.0%
TGGATCAGTATATGTCATCT+TGG - chr4_3:15757839-15757858 None:intergenic 35.0%
GATGTCTTCTTGTTCTGATT+TGG - chr4_3:15757859-15757878 None:intergenic 35.0%
GAACAAGAAGACATCTGATT+CGG + chr4_3:15757864-15757883 Msa0632130:CDS 35.0%
GATGAGAGCAATAACAAATC+TGG + chr4_3:15757886-15757905 Msa0632130:CDS 35.0%
GATGAGAGCAATAACAAATC+TGG + chr4_3:15757886-15757905 Msa0632130:CDS 35.0%
TGATGAGAGCGAGAAAAAAT+TGG + chr4_3:15757993-15758012 Msa0632130:CDS 35.0%
CTTCTCATTAGACCTTTCAT+CGG - chr4_3:15758133-15758152 None:intergenic 35.0%
!!! AACTGGATCTTTTTCAACTC+AGG + chr4_3:15758242-15758261 Msa0632130:CDS 35.0%
AACACTATGAACACAGAGAA+AGG + chr4_3:15758412-15758431 Msa0632130:CDS 35.0%
!! ACTAAGCTTGCTGAATACAA+GGG + chr4_3:15758627-15758646 Msa0632130:CDS 35.0%
TTACATTGACACCATACAAC+AGG + chr4_3:15758731-15758750 Msa0632130:CDS 35.0%
! AGATGAGAAATTTGCTCTAG+TGG - chr4_3:15758875-15758894 None:intergenic 35.0%
! GTTTTCATCCTAGAATTGCT+AGG + chr4_3:15759098-15759117 Msa0632130:intron 35.0%
CAAACAAACACGTGTGATAT+TGG + chr4_3:15759206-15759225 Msa0632130:CDS 35.0%
! TGAGCTTCATGTTCATCTTT+TGG - chr4_3:15759303-15759322 None:intergenic 35.0%
AAAAGATGAACATGAAGCTC+AGG + chr4_3:15759302-15759321 Msa0632130:CDS 35.0%
AGGTACAATTTGCACTTGAA+AGG + chr4_3:15759322-15759341 Msa0632130:CDS 35.0%
GGTACAATTTGCACTTGAAA+GGG + chr4_3:15759323-15759342 Msa0632130:CDS 35.0%
GTACAATTTGCACTTGAAAG+GGG + chr4_3:15759324-15759343 Msa0632130:CDS 35.0%
GAAATACCTTCTATATGCCA+CGG - chr4_3:15759441-15759460 None:intergenic 35.0%
CATTCACTGCTGTAAAAGTT+AGG - chr4_3:15759477-15759496 None:intergenic 35.0%
! AACTTTTACAGCAGTGAATG+TGG + chr4_3:15759477-15759496 Msa0632130:intron 35.0%
TCTAAATGCCAAAATGATGC+TGG - chr4_3:15759563-15759582 None:intergenic 35.0%
TTCACTATTTGTGCACATGT+AGG + chr4_3:15759629-15759648 Msa0632130:intron 35.0%
CTCTAACAAAAGCAATGTGT+TGG + chr4_3:15759856-15759875 Msa0632130:CDS 35.0%
ACATATAGAAGGCTCATTCT+TGG - chr4_3:15759973-15759992 None:intergenic 35.0%
GTAAAGGAAAAAATACCAGG+CGG - chr4_3:15760018-15760037 None:intergenic 35.0%
ACATTCTAATCGCTCAGTAA+AGG - chr4_3:15760034-15760053 None:intergenic 35.0%
TGATCAGCAGTAAAATCTTC+AGG - chr4_3:15760278-15760297 None:intergenic 35.0%
! GTGTCCAAGTCTTATCTAAA+TGG + chr4_3:15760317-15760336 Msa0632130:CDS 35.0%
ATGGACATGAGATCAGTTTA+TGG + chr4_3:15760374-15760393 Msa0632130:CDS 35.0%
ACATGAGATCAGTTTATGGA+GGG + chr4_3:15760378-15760397 Msa0632130:CDS 35.0%
!!! GTTTGACACCTTCTGTTTTT+TGG + chr4_3:15760464-15760483 Msa0632130:intron 35.0%
ATTTATGAACGTGGTCTGTT+TGG + chr4_3:15760572-15760591 Msa0632130:CDS 35.0%
AATCATTTAGCACATATCCC+AGG + chr4_3:15760615-15760634 Msa0632130:CDS 35.0%
ATCTGCATGAAGTAGATCAT+AGG - chr4_3:15760642-15760661 None:intergenic 35.0%
GACTTACACTAAAGATTTGC+AGG + chr4_3:15760932-15760951 Msa0632130:CDS 35.0%
ATACTCTACTGTCTCGAATT+CGG - chr4_3:15761032-15761051 None:intergenic 35.0%
AGGAATTCTGATCACATTCT+TGG + chr4_3:15761257-15761276 Msa0632130:three_prime_UTR 35.0%
!! TCTTGGAATTTTAGAGGCTT+TGG + chr4_3:15761274-15761293 Msa0632130:three_prime_UTR 35.0%
! CTTTGGATGATTGATAGTTG+AGG + chr4_3:15761291-15761310 Msa0632130:three_prime_UTR 35.0%
! ATGATTGATAGTTGAGGTTC+TGG + chr4_3:15761297-15761316 Msa0632130:three_prime_UTR 35.0%
AGGATGAAGAAGGATAGAGT+TGG - chr4_3:15756497-15756516 None:intergenic 40.0%
! AATGTGATGGGAAAGGAATG+GGG - chr4_3:15756537-15756556 None:intergenic 40.0%
! GAATGTGATGGGAAAGGAAT+GGG - chr4_3:15756538-15756557 None:intergenic 40.0%
! TGAATGTGATGGGAAAGGAA+TGG - chr4_3:15756539-15756558 None:intergenic 40.0%
!! TTGGTGGGGTAAAGTTGATA+GGG - chr4_3:15756594-15756613 None:intergenic 40.0%
! TTTGGTGGGGTAAAGTTGAT+AGG - chr4_3:15756595-15756614 None:intergenic 40.0%
TCTTGAATTGGGATGGTGAA+AGG - chr4_3:15756649-15756668 None:intergenic 40.0%
! CACGCTTCAATCAAAAGTGT+AGG - chr4_3:15757089-15757108 None:intergenic 40.0%
CTGTTCGGGAATACAAACAA+CGG - chr4_3:15757401-15757420 None:intergenic 40.0%
CAGATAGTTTAGACCTGTTC+GGG - chr4_3:15757415-15757434 None:intergenic 40.0%
GCAGATAGTTTAGACCTGTT+CGG - chr4_3:15757416-15757435 None:intergenic 40.0%
! TGTGTTTGTTGCTCTATGCT+TGG + chr4_3:15757540-15757559 Msa0632130:CDS 40.0%
TTTGTTGCTCTATGCTTGGT+TGG + chr4_3:15757544-15757563 Msa0632130:CDS 40.0%
TTGTTGCTCTATGCTTGGTT+GGG + chr4_3:15757545-15757564 Msa0632130:CDS 40.0%
! GACTCATCTACATTTTGCAC+CGG - chr4_3:15757598-15757617 None:intergenic 40.0%
! CTTCTGAGGATTGCTATTAG+TGG - chr4_3:15757674-15757693 None:intergenic 40.0%
CTTAGCATTGTTATCCTCCT+TGG - chr4_3:15757734-15757753 None:intergenic 40.0%
!! ATAACAGGGTTGTTTTCGGA+CGG - chr4_3:15757757-15757776 None:intergenic 40.0%
TCTTCAGGAGACTTATCTTC+AGG - chr4_3:15757814-15757833 None:intergenic 40.0%
CTTCTCACTCTCATCAGAAT+CGG - chr4_3:15757962-15757981 None:intergenic 40.0%
TTTCTCGCTCTCATCAGAAT+CGG - chr4_3:15757989-15758008 None:intergenic 40.0%
GAAGAAAAGGCAGATCAAAG+TGG + chr4_3:15758096-15758115 Msa0632130:CDS 40.0%
!! CTCATTAGAACCCTGGTTTT+TGG - chr4_3:15758172-15758191 None:intergenic 40.0%
! TTTCATTCAGAAGCTCTGAC+TGG - chr4_3:15758212-15758231 None:intergenic 40.0%
!!! CTTGGAGGATTTTTGAGACT+CGG - chr4_3:15758289-15758308 None:intergenic 40.0%
AAATCCTCCAAGCAATCTAC+CGG + chr4_3:15758297-15758316 Msa0632130:CDS 40.0%
TTGACAACTTGAAGGCGATT+CGG + chr4_3:15758373-15758392 Msa0632130:CDS 40.0%
ATTGGGCGTTTATATCCTTC+AGG - chr4_3:15758477-15758496 None:intergenic 40.0%
GATATAAACGCCCAATCGAA+TGG + chr4_3:15758481-15758500 Msa0632130:CDS 40.0%
!! TGTACCTTCTCTCTGCTTTT+GGG - chr4_3:15758507-15758526 None:intergenic 40.0%
! TTGTACCTTCTCTCTGCTTT+TGG - chr4_3:15758508-15758527 None:intergenic 40.0%
TATTCAGCAAGCTTAGTGTG+TGG - chr4_3:15758624-15758643 None:intergenic 40.0%
!! CACTAAGCTTGCTGAATACA+AGG + chr4_3:15758626-15758645 Msa0632130:CDS 40.0%
!! CTAAGCTTGCTGAATACAAG+GGG + chr4_3:15758628-15758647 Msa0632130:CDS 40.0%
CTGTAACTTTCACCCAATTC+TGG - chr4_3:15758656-15758675 None:intergenic 40.0%
CAGAATTGGGTGAAAGTTAC+AGG + chr4_3:15758654-15758673 Msa0632130:CDS 40.0%
AAGCGCACCATGTTTGAATT+GGG - chr4_3:15758709-15758728 None:intergenic 40.0%
CAATTCTGCCTAGCAATTCT+AGG - chr4_3:15759109-15759128 None:intergenic 40.0%
ACACGTGTGATATTGGATGT+TGG + chr4_3:15759213-15759232 Msa0632130:CDS 40.0%
GTGATATTGGATGTTGGATG+CGG + chr4_3:15759219-15759238 Msa0632130:CDS 40.0%
TCAAATACTCTAGCAGGGAA+GGG - chr4_3:15759390-15759409 None:intergenic 40.0%
ATCAAATACTCTAGCAGGGA+AGG - chr4_3:15759391-15759410 None:intergenic 40.0%
TGGCATCAAATACTCTAGCA+GGG - chr4_3:15759395-15759414 None:intergenic 40.0%
ATGGCATCAAATACTCTAGC+AGG - chr4_3:15759396-15759415 None:intergenic 40.0%
! GCATTTCACCAGCATCATTT+TGG + chr4_3:15759552-15759571 Msa0632130:intron 40.0%
ACTATTTGTGCACATGTAGG+TGG + chr4_3:15759632-15759651 Msa0632130:intron 40.0%
!! TTGAATAGAGTATTGCGACC+TGG + chr4_3:15759671-15759690 Msa0632130:CDS 40.0%
TGCCCGAAGATGTAGAAATA+TGG + chr4_3:15759735-15759754 Msa0632130:CDS 40.0%
AGAGCCTTCATTTCTGTAGA+CGG - chr4_3:15759840-15759859 None:intergenic 40.0%
AAAAGCAATGTGTTGGGAAG+TGG + chr4_3:15759863-15759882 Msa0632130:CDS 40.0%
AAAAAATACCAGGCGGCATT+AGG - chr4_3:15760011-15760030 None:intergenic 40.0%
TGATATTCCTCATTCATCGC+AGG + chr4_3:15760105-15760124 Msa0632130:intron 40.0%
TTGTGCATGCAACTTTGCAA+TGG - chr4_3:15760137-15760156 None:intergenic 40.0%
TTACTGCTGATCATGAACAC+TGG + chr4_3:15760285-15760304 Msa0632130:CDS 40.0%
! TAAATGGGATTGGCATTCAG+TGG + chr4_3:15760333-15760352 Msa0632130:CDS 40.0%
GACATGAGATCAGTTTATGG+AGG + chr4_3:15760377-15760396 Msa0632130:CDS 40.0%
TGTCAAACACAGGGAAGTAA+TGG - chr4_3:15760452-15760471 None:intergenic 40.0%
!! AACAGAAGGTGTCAAACACA+GGG - chr4_3:15760461-15760480 None:intergenic 40.0%
!! AAACAGAAGGTGTCAAACAC+AGG - chr4_3:15760462-15760481 None:intergenic 40.0%
!!! ACCTTCTGTTTTTTGGATCC+AGG + chr4_3:15760471-15760490 Msa0632130:intron 40.0%
ACCTGGATCCAAAAAACAGA+AGG - chr4_3:15760475-15760494 None:intergenic 40.0%
TTGGGTAATGAATGTCGTTC+CGG + chr4_3:15760523-15760542 Msa0632130:CDS 40.0%
TGAAGTAGATCATAGGACCT+GGG - chr4_3:15760635-15760654 None:intergenic 40.0%
ATGAAGTAGATCATAGGACC+TGG - chr4_3:15760636-15760655 None:intergenic 40.0%
TCTACTGTCTCCAATTCTGT+AGG - chr4_3:15760990-15761009 None:intergenic 40.0%
GAGACAGTAGAGTATGCTAT+TGG + chr4_3:15760999-15761018 Msa0632130:CDS 40.0%
ATGAGATGCCAACAAGAGTT+AGG + chr4_3:15761070-15761089 Msa0632130:three_prime_UTR 40.0%
AGAAACAAGCTTCCATACAG+TGG - chr4_3:15761211-15761230 None:intergenic 40.0%
!! TTGTGGTGTTGTAACGCATG+AGG - chr4_3:15756707-15756726 None:intergenic 45.0%
CGTTGTTTGTATTCCCGAAC+AGG + chr4_3:15757399-15757418 Msa0632130:intron 45.0%
GATGACATCGTCTGTAGTTC+CGG + chr4_3:15757576-15757595 Msa0632130:CDS 45.0%
!! GGGCATAACAGGGTTGTTTT+CGG - chr4_3:15757761-15757780 None:intergenic 45.0%
GAAAACAACCCTGTTATGCC+CGG + chr4_3:15757760-15757779 Msa0632130:CDS 45.0%
GATTTCTCTTCCTGCTTTCC+GGG - chr4_3:15757781-15757800 None:intergenic 45.0%
CGATTTCTCTTCCTGCTTTC+CGG - chr4_3:15757782-15757801 None:intergenic 45.0%
CGGAAAGCAGGAAGAGAAAT+CGG + chr4_3:15757780-15757799 Msa0632130:CDS 45.0%
GTAACCAAGAGTCCGATGAA+AGG + chr4_3:15758118-15758137 Msa0632130:CDS 45.0%
TAGACCTTTCATCGGACTCT+TGG - chr4_3:15758125-15758144 None:intergenic 45.0%
TCTAATGAGCTACTCCCTTC+TGG + chr4_3:15758183-15758202 Msa0632130:CDS 45.0%
CTAATGAGCTACTCCCTTCT+GGG + chr4_3:15758184-15758203 Msa0632130:CDS 45.0%
TAATGAGCTACTCCCTTCTG+GGG + chr4_3:15758185-15758204 Msa0632130:CDS 45.0%
AATCCTCCAAGCAATCTACC+GGG + chr4_3:15758298-15758317 Msa0632130:CDS 45.0%
ATTGAACCCGGTAGATTGCT+TGG - chr4_3:15758307-15758326 None:intergenic 45.0%
AGCAATCTACCGGGTTCAAT+TGG + chr4_3:15758307-15758326 Msa0632130:CDS 45.0%
GCAGAGTTTCCAATTGAACC+CGG - chr4_3:15758319-15758338 None:intergenic 45.0%
AAACTCTGCAATGTCACTGC+CGG + chr4_3:15758330-15758349 Msa0632130:CDS 45.0%
CAAGGCATGGAATGTAGTCA+GGG - chr4_3:15758356-15758375 None:intergenic 45.0%
TCAAGGCATGGAATGTAGTC+AGG - chr4_3:15758357-15758376 None:intergenic 45.0%
TCCATGCCTTGACAACTTGA+AGG + chr4_3:15758365-15758384 Msa0632130:CDS 45.0%
!! GAATCGCCTTCAAGTTGTCA+AGG - chr4_3:15758374-15758393 None:intergenic 45.0%
! TGCTTTTGGGCCATTCGATT+GGG - chr4_3:15758494-15758513 None:intergenic 45.0%
AAGCTTAGTGTGTGGAACGT+TGG - chr4_3:15758616-15758635 None:intergenic 45.0%
!! AATACAAGGGGCACCAGAAT+TGG + chr4_3:15758640-15758659 Msa0632130:CDS 45.0%
!! ATACAAGGGGCACCAGAATT+GGG + chr4_3:15758641-15758660 Msa0632130:CDS 45.0%
!! GAGTACCTTACTTTTCCTGG+TGG + chr4_3:15758678-15758697 Msa0632130:CDS 45.0%
!! TACCTTACTTTTCCTGGTGG+TGG + chr4_3:15758681-15758700 Msa0632130:CDS 45.0%
TTCCACCACCAGGAAAAGTA+AGG - chr4_3:15758686-15758705 None:intergenic 45.0%
GGTGGAACCCAATTCAAACA+TGG + chr4_3:15758699-15758718 Msa0632130:CDS 45.0%
GAAGCGCACCATGTTTGAAT+TGG - chr4_3:15758710-15758729 None:intergenic 45.0%
AGTCTGTACCTGATATTGCC+TGG + chr4_3:15759181-15759200 Msa0632130:intron 45.0%
GTCTGTACCTGATATTGCCT+GGG + chr4_3:15759182-15759201 Msa0632130:intron 45.0%
TCTGTACCTGATATTGCCTG+GGG + chr4_3:15759183-15759202 Msa0632130:CDS 45.0%
AAAGAGAAAGCCACCAAAGC+TGG - chr4_3:15759250-15759269 None:intergenic 45.0%
TCCTGCTATATCTGCTGTGA+TGG + chr4_3:15759350-15759369 Msa0632130:CDS 45.0%
CCTGCTATATCTGCTGTGAT+GGG + chr4_3:15759351-15759370 Msa0632130:CDS 45.0%
TCTACAGCGTGCACAATGAA+TGG - chr4_3:15759415-15759434 None:intergenic 45.0%
AGAGTTCCGTGGCATATAGA+AGG + chr4_3:15759432-15759451 Msa0632130:CDS 45.0%
TGTAGGTGGCAAACTTCTCT+TGG + chr4_3:15759646-15759665 Msa0632130:intron 45.0%
!! AATAGAGTATTGCGACCTGG+TGG + chr4_3:15759674-15759693 Msa0632130:CDS 45.0%
GACCTGGTGGTTTCTTTGTA+TGG + chr4_3:15759687-15759706 Msa0632130:CDS 45.0%
GACCATACAAAGAAACCACC+AGG - chr4_3:15759692-15759711 None:intergenic 45.0%
TCGGGCAGCTTCTGATAAAT+AGG - chr4_3:15759722-15759741 None:intergenic 45.0%
AGCCTTCATTTCTGTAGACG+GGG - chr4_3:15759838-15759857 None:intergenic 45.0%
GAGCCTTCATTTCTGTAGAC+GGG - chr4_3:15759839-15759858 None:intergenic 45.0%
GAATGTTCCTGCGATGAATG+AGG - chr4_3:15760115-15760134 None:intergenic 45.0%
CAGTTAGTTCGACAGAACGT+GGG + chr4_3:15760162-15760181 Msa0632130:CDS 45.0%
!! GGTGATTTGCTCAGTCTTTC+TGG - chr4_3:15760209-15760228 None:intergenic 45.0%
GACTGAGCAAATCACCTTAC+TGG + chr4_3:15760213-15760232 Msa0632130:CDS 45.0%
GCAGTAAAATCTTCAGGAGC+AGG - chr4_3:15760272-15760291 None:intergenic 45.0%
TGAAACGTTGTTTGTGGCAC+AGG + chr4_3:15760775-15760794 Msa0632130:intron 45.0%
CCTGAGAATCCTATCAACCT+CGG - chr4_3:15760823-15760842 None:intergenic 45.0%
TAATGGTCTCAGCAGTGTCT+CGG - chr4_3:15760866-15760885 None:intergenic 45.0%
AGACACTGCTGAGACCATTA+AGG + chr4_3:15760866-15760885 Msa0632130:CDS 45.0%
! CTTGGTGACATCTATGCAGT+GGG + chr4_3:15760899-15760918 Msa0632130:CDS 45.0%
TATGTGTCCAGAAGTCCATG+TGG + chr4_3:15760961-15760980 Msa0632130:CDS 45.0%
!! GTAACATGGTGCCGTAGTTA+AGG + chr4_3:15761237-15761256 Msa0632130:three_prime_UTR 45.0%
!!! TATTTTATTTTTTTTTTCTT+TGG + chr4_3:15761169-15761188 Msa0632130:three_prime_UTR 5.0%
CAGAGACTAGGAGAGAGTGA+CGG - chr4_3:15756432-15756451 None:intergenic 50.0%
!! GGGCAATGGGTTAAGGGAAA+AGG - chr4_3:15756517-15756536 None:intergenic 50.0%
!! GGAATGGGGCAATGGGTTAA+GGG - chr4_3:15756523-15756542 None:intergenic 50.0%
!! AGGAATGGGGCAATGGGTTA+AGG - chr4_3:15756524-15756543 None:intergenic 50.0%
TGGGAAAGGAATGGGGCAAT+GGG - chr4_3:15756530-15756549 None:intergenic 50.0%
ATGGGAAAGGAATGGGGCAA+TGG - chr4_3:15756531-15756550 None:intergenic 50.0%
TCCGTCGAGTTACTGCTCAA+CGG + chr4_3:15757507-15757526 Msa0632130:CDS 50.0%
ACCGTTGAGCAGTAACTCGA+CGG - chr4_3:15757511-15757530 None:intergenic 50.0%
CTCTATGCTTGGTTGGGCTA+TGG + chr4_3:15757551-15757570 Msa0632130:CDS 50.0%
ACAGAGCGAGGTGAAGAATC+AGG + chr4_3:15757639-15757658 Msa0632130:CDS 50.0%
! ATCCTCCTTGGTAGCTTCCT+CGG - chr4_3:15757722-15757741 None:intergenic 50.0%
GGAGTAGCTCATTAGAACCC+TGG - chr4_3:15758179-15758198 None:intergenic 50.0%
AATGAGCTACTCCCTTCTGG+GGG + chr4_3:15758186-15758205 Msa0632130:CDS 50.0%
!! GCCTTCAAGTTGTCAAGGCA+TGG - chr4_3:15758369-15758388 None:intergenic 50.0%
ATCCTTCAGGAAGAGCGACA+AGG - chr4_3:15758464-15758483 None:intergenic 50.0%
!! CTGCTTTTGGGCCATTCGAT+TGG - chr4_3:15758495-15758514 None:intergenic 50.0%
ATGGCCCAAAAGCAGAGAGA+AGG + chr4_3:15758500-15758519 Msa0632130:CDS 50.0%
!! GGCGAGTACCTTACTTTTCC+TGG + chr4_3:15758675-15758694 Msa0632130:CDS 50.0%
TTGAATTGGGTTCCACCACC+AGG - chr4_3:15758696-15758715 None:intergenic 50.0%
TGTTTGCCCCAGGCAATATC+AGG - chr4_3:15759192-15759211 None:intergenic 50.0%
CCCATCACAGCAGATATAGC+AGG - chr4_3:15759354-15759373 None:intergenic 50.0%
GACCCCGTCTACAGAAATGA+AGG + chr4_3:15759833-15759852 Msa0632130:intron 50.0%
GGAAGTGGTGTCTATCAGCA+GGG + chr4_3:15759878-15759897 Msa0632130:CDS 50.0%
ATGATGATCCTAATGCCGCC+TGG + chr4_3:15760000-15760019 Msa0632130:CDS 50.0%
CCACGTTCTGTCGAACTAAC+TGG - chr4_3:15760164-15760183 None:intergenic 50.0%
CCAGTTAGTTCGACAGAACG+TGG + chr4_3:15760161-15760180 Msa0632130:CDS 50.0%
GTCCAATGTGCGCAATGTCA+TGG + chr4_3:15760355-15760374 Msa0632130:CDS 50.0%
GTCCATGACATTGCGCACAT+TGG - chr4_3:15760360-15760379 None:intergenic 50.0%
! CAGGTTTGCAGCAGCTTTGA+GGG + chr4_3:15760490-15760509 Msa0632130:intron 50.0%
! GTTTGAAGCTGTAGTTGCCG+AGG + chr4_3:15760803-15760822 Msa0632130:CDS 50.0%
! CTGTAGTTGCCGAGGTTGAT+AGG + chr4_3:15760811-15760830 Msa0632130:CDS 50.0%
!! CCGAGGTTGATAGGATTCTC+AGG + chr4_3:15760820-15760839 Msa0632130:CDS 50.0%
TGATAGGATTCTCAGGCCTG+AGG + chr4_3:15760827-15760846 Msa0632130:CDS 50.0%
GATAGGATTCTCAGGCCTGA+GGG + chr4_3:15760828-15760847 Msa0632130:CDS 50.0%
CGGACAATAAGCTTTCCCTC+AGG - chr4_3:15760846-15760865 None:intergenic 50.0%
TGCTGAGACCATTAAGGAGC+TGG + chr4_3:15760872-15760891 Msa0632130:CDS 50.0%
CAAGCTCTCCAGCTCCTTAA+TGG - chr4_3:15760883-15760902 None:intergenic 50.0%
CATTAAGGAGCTGGAGAGCT+TGG + chr4_3:15760881-15760900 Msa0632130:CDS 50.0%
! GCTTGGTGACATCTATGCAG+TGG + chr4_3:15760898-15760917 Msa0632130:CDS 50.0%
AAAGCGCGTGAAGCGAGAAG+TGG - chr4_3:15756823-15756842 None:intergenic 55.0%
TGAGGTGAAAGGACAGAGCG+AGG + chr4_3:15757627-15757646 Msa0632130:CDS 55.0%
TAAGAAGGGAGATCTGCCCG+AGG + chr4_3:15757702-15757721 Msa0632130:CDS 55.0%
! TCCTCCTTGGTAGCTTCCTC+GGG - chr4_3:15757721-15757740 None:intergenic 55.0%
CCTGCTTTCCGGGCATAACA+GGG - chr4_3:15757771-15757790 None:intergenic 55.0%
TCCTGCTTTCCGGGCATAAC+AGG - chr4_3:15757772-15757791 None:intergenic 55.0%
GAACCCGGTAGATTGCTTGG+AGG - chr4_3:15758304-15758323 None:intergenic 55.0%
GCATGGAATGTAGTCAGGGC+CGG - chr4_3:15758352-15758371 None:intergenic 55.0%
AGGCAGGTAGGAGGATCTTC+AGG - chr4_3:15758444-15758463 None:intergenic 55.0%
TTCAGGAAGAGCGACAAGGC+AGG - chr4_3:15758460-15758479 None:intergenic 55.0%
TGCCTTGTCGCTCTTCCTGA+AGG + chr4_3:15758459-15758478 Msa0632130:CDS 55.0%
CACACGTGTTTGTTTGCCCC+AGG - chr4_3:15759202-15759221 None:intergenic 55.0%
!! CTGCTGTGATGGGCACAAAG+AGG + chr4_3:15759361-15759380 Msa0632130:CDS 55.0%
GGGAAGTGGTGTCTATCAGC+AGG + chr4_3:15759877-15759896 Msa0632130:CDS 55.0%
CGACAGAACGTGGGTCACAA+TGG + chr4_3:15760171-15760190 Msa0632130:CDS 55.0%
AACGTGGGTCACAATGGCCA+GGG + chr4_3:15760177-15760196 Msa0632130:CDS 55.0%
CCTCAAAGCTGCTGCAAACC+TGG - chr4_3:15760492-15760511 None:intergenic 55.0%
CCAGGTTTGCAGCAGCTTTG+AGG + chr4_3:15760489-15760508 Msa0632130:intron 55.0%
TGTCGTTCCGGTAGACTCAC+CGG + chr4_3:15760535-15760554 Msa0632130:CDS 55.0%
AGTGTGTCCGGTGAGTCTAC+CGG - chr4_3:15760545-15760564 None:intergenic 55.0%
GGTGACATCTATGCAGTGGG+AGG + chr4_3:15760902-15760921 Msa0632130:CDS 55.0%
GTGTCCAGAAGTCCATGTGG+CGG + chr4_3:15760964-15760983 Msa0632130:CDS 55.0%
CAATTCTGTAGGCCGCCACA+TGG - chr4_3:15760979-15760998 None:intergenic 55.0%
CATGTGGCGGCCTACAGAAT+TGG + chr4_3:15760977-15760996 Msa0632130:CDS 55.0%
TCTGCCCGAGGAAGCTACCA+AGG + chr4_3:15757714-15757733 Msa0632130:CDS 60.0%
CCCTGTTATGCCCGGAAAGC+AGG + chr4_3:15757768-15757787 Msa0632130:CDS 60.0%
AGAGCGACAAGGCAGGTAGG+AGG - chr4_3:15758453-15758472 None:intergenic 60.0%
GGAAGAGCGACAAGGCAGGT+AGG - chr4_3:15758456-15758475 None:intergenic 60.0%
GTGCACGCTGTAGAGTTCCG+TGG + chr4_3:15759421-15759440 Msa0632130:CDS 60.0%
GAACGTGGGTCACAATGGCC+AGG + chr4_3:15760176-15760195 Msa0632130:CDS 60.0%
ACGTGGGTCACAATGGCCAG+GGG + chr4_3:15760178-15760197 Msa0632130:CDS 60.0%
! AGTCTTTCTGGCCACTCCCC+TGG - chr4_3:15760197-15760216 None:intergenic 60.0%
TAGGCCGCCACATGGACTTC+TGG - chr4_3:15760971-15760990 None:intergenic 60.0%
GCCCGAGGAAGCTACCAAGG+AGG + chr4_3:15757717-15757736 Msa0632130:CDS 65.0%
! GCTCTGACTGGCCCCCAGAA+GGG - chr4_3:15758200-15758219 None:intergenic 65.0%
! AGCTCTGACTGGCCCCCAGA+AGG - chr4_3:15758201-15758220 None:intergenic 65.0%
GGATGCGGCGTTGCCAGCTT+TGG + chr4_3:15759234-15759253 Msa0632130:CDS 65.0%
! TGCGGCGTTGCCAGCTTTGG+TGG + chr4_3:15759237-15759256 Msa0632130:CDS 65.0%
GGTCACAATGGCCAGGGGAG+TGG + chr4_3:15760183-15760202 Msa0632130:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 15756413 15761404 15756413 ID=Msa0632130;Name=Msa0632130
chr4_3 mRNA 15756413 15761404 15756413 ID=Msa0632130-mRNA-1;Parent=Msa0632130;Name=Msa0632130-mRNA-1;_AED=0.06;_eAED=0.06;_QI=404|1|1|1|0.87|0.77|9|358|826
chr4_3 exon 15756413 15756771 15756413 ID=Msa0632130-mRNA-1:exon:4437;Parent=Msa0632130-mRNA-1
chr4_3 exon 15757421 15758521 15757421 ID=Msa0632130-mRNA-1:exon:4438;Parent=Msa0632130-mRNA-1
chr4_3 exon 15758603 15758752 15758603 ID=Msa0632130-mRNA-1:exon:4439;Parent=Msa0632130-mRNA-1
chr4_3 exon 15759183 15759453 15759183 ID=Msa0632130-mRNA-1:exon:4440;Parent=Msa0632130-mRNA-1
chr4_3 exon 15759651 15759761 15759651 ID=Msa0632130-mRNA-1:exon:4441;Parent=Msa0632130-mRNA-1
chr4_3 exon 15759847 15760021 15759847 ID=Msa0632130-mRNA-1:exon:4442;Parent=Msa0632130-mRNA-1
chr4_3 exon 15760127 15760399 15760127 ID=Msa0632130-mRNA-1:exon:4443;Parent=Msa0632130-mRNA-1
chr4_3 exon 15760493 15760687 15760493 ID=Msa0632130-mRNA-1:exon:4444;Parent=Msa0632130-mRNA-1
chr4_3 exon 15760797 15761404 15760797 ID=Msa0632130-mRNA-1:exon:4445;Parent=Msa0632130-mRNA-1
chr4_3 five_prime_UTR 15756413 15756771 15756413 ID=Msa0632130-mRNA-1:five_prime_utr;Parent=Msa0632130-mRNA-1
chr4_3 five_prime_UTR 15757421 15757465 15757421 ID=Msa0632130-mRNA-1:five_prime_utr;Parent=Msa0632130-mRNA-1
chr4_3 CDS 15757466 15758521 15757466 ID=Msa0632130-mRNA-1:cds;Parent=Msa0632130-mRNA-1
chr4_3 CDS 15758603 15758752 15758603 ID=Msa0632130-mRNA-1:cds;Parent=Msa0632130-mRNA-1
chr4_3 CDS 15759183 15759453 15759183 ID=Msa0632130-mRNA-1:cds;Parent=Msa0632130-mRNA-1
chr4_3 CDS 15759651 15759761 15759651 ID=Msa0632130-mRNA-1:cds;Parent=Msa0632130-mRNA-1
chr4_3 CDS 15759847 15760021 15759847 ID=Msa0632130-mRNA-1:cds;Parent=Msa0632130-mRNA-1
chr4_3 CDS 15760127 15760399 15760127 ID=Msa0632130-mRNA-1:cds;Parent=Msa0632130-mRNA-1
chr4_3 CDS 15760493 15760687 15760493 ID=Msa0632130-mRNA-1:cds;Parent=Msa0632130-mRNA-1
chr4_3 CDS 15760797 15761046 15760797 ID=Msa0632130-mRNA-1:cds;Parent=Msa0632130-mRNA-1
chr4_3 three_prime_UTR 15761047 15761404 15761047 ID=Msa0632130-mRNA-1:three_prime_utr;Parent=Msa0632130-mRNA-1
Gene Sequence

>Msa0632130

ATGGCACAAGCGAGATATAGTAGAATAGACAATAAACGATCTCCGTCGAGTTACTGCTCAACGGTGACGATTGTTGTGTTTGTTGCTCTATGCTTGGTTGGGCTATGGATGATGACATCGTCTGTAGTTCCGGTGCAAAATGTAGATGAGTCGAATAAAAATGAGGTGAAAGGACAGAGCGAGGTGAAGAATCAGGCAACTGACACCACTAATAGCAATCCTCAGAAGTTTGAAGATAAGAAGGGAGATCTGCCCGAGGAAGCTACCAAGGAGGATAACAATGCTAAGCCGTCCGAAAACAACCCTGTTATGCCCGGAAAGCAGGAAGAGAAATCGGATGAAAAGCCTGAAGATAAGTCTCCTGAAGATACCAAGATGACATATACTGATCCAAATCAGAACAAGAAGACATCTGATTCGGATGAGAGCAATAACAAATCTGGTTCTGATGAGAGCAATAACAAATCTGGTTCTGATGAGAGCAACAAGAAGTCCGATTCTGATGAGAGTGAGAAGAAGTCCGATTCTGATGAGAGCGAGAAAAAATTGGATTCAAACGATAATAAATCTGGTTCAGATGCAAGTGAAAATAAAAAGGATGAGTCGAGTGAAACAACAGATAGTAAGACAGAAGAAAAGGCAGATCAAAGTGGTAACCAAGAGTCCGATGAAAGGTCTAATGAGAAGAAAACAGATGAAAATACCAAAAACCAGGGTTCTAATGAGCTACTCCCTTCTGGGGGCCAGTCAGAGCTTCTGAATGAAACTACAACTCAAACTGGATCTTTTTCAACTCAGGCAGCAGAGTCAAAGTCTGAAACCGAGTCTCAAAAATCCTCCAAGCAATCTACCGGGTTCAATTGGAAACTCTGCAATGTCACTGCCGGCCCTGACTACATTCCATGCCTTGACAACTTGAAGGCGATTCGGAACCTTAAAACTACTAAACACTATGAACACAGAGAAAGGCAATGTCCTGAAGATCCTCCTACCTGCCTTGTCGCTCTTCCTGAAGGATATAAACGCCCAATCGAATGGCCCAAAAGCAGAGAGAAGATATGGTATTCCAACGTTCCACACACTAAGCTTGCTGAATACAAGGGGCACCAGAATTGGGTGAAAGTTACAGGCGAGTACCTTACTTTTCCTGGTGGTGGAACCCAATTCAAACATGGTGCGCTTCATTACATTGACACCATACAACAGTCTGTACCTGATATTGCCTGGGGCAAACAAACACGTGTGATATTGGATGTTGGATGCGGCGTTGCCAGCTTTGGTGGCTTTCTCTTTGAAAGAGATGTACTTGCAATGTCATTTGCACCAAAAGATGAACATGAAGCTCAGGTACAATTTGCACTTGAAAGGGGAATTCCTGCTATATCTGCTGTGATGGGCACAAAGAGGCTTCCCTTCCCTGCTAGAGTATTTGATGCCATTCATTGTGCACGCTGTAGAGTTCCGTGGCATATAGAAGGTGGCAAACTTCTCTTGGAGTTGAATAGAGTATTGCGACCTGGTGGTTTCTTTGTATGGTCTGCTACTCCTATTTATCAGAAGCTGCCCGAAGATGTAGAAATATGGAACGAAATGAAGGCTCTAACAAAAGCAATGTGTTGGGAAGTGGTGTCTATCAGCAGGGATAAACTTAATAAAGTTGGTATAGCTGTATACAAGAAGCCAACTTCTAATGAGTGTTATGAGAAACGTTCCAAGAATGAGCCTTCTATATGTCAAGACTATGATGATCCTAATGCCGCCTGGAACATTCCATTGCAAAGTTGCATGCACAAAGCGCCAGTTAGTTCGACAGAACGTGGGTCACAATGGCCAGGGGAGTGGCCAGAAAGACTGAGCAAATCACCTTACTGGTTATCAAATTCTGAAGTTGGAGTTTATGGAAAACCTGCTCCTGAAGATTTTACTGCTGATCATGAACACTGGAAACGTGTAGTGTCCAAGTCTTATCTAAATGGGATTGGCATTCAGTGGTCCAATGTGCGCAATGTCATGGACATGAGATCAGTTTATGGAGGGTTTGCAGCAGCTTTGAGGGATTTGAAAATTTGGGTAATGAATGTCGTTCCGGTAGACTCACCGGACACACTTCCAATTATTTATGAACGTGGTCTGTTTGGCATATATCATGATTGGTGTGAATCATTTAGCACATATCCCAGGTCCTATGATCTACTTCATGCAGATCATCTGTTTTCAAAGCTTAAGAAAAGGTGCAAGTTTGAAGCTGTAGTTGCCGAGGTTGATAGGATTCTCAGGCCTGAGGGAAAGCTTATTGTCCGAGACACTGCTGAGACCATTAAGGAGCTGGAGAGCTTGGTGACATCTATGCAGTGGGAGGTTCGTATGACTTACACTAAAGATTTGCAGGGCATTTTATGTGTCCAGAAGTCCATGTGGCGGCCTACAGAATTGGAGACAGTAGAGTATGCTATTGGCAGCATACCGAATTCGAGACAGTAG
Protein sequence

>Msa0632130

MAQARYSRIDNKRSPSSYCSTVTIVVFVALCLVGLWMMTSSVVPVQNVDESNKNEVKGQSEVKNQATDTTNSNPQKFEDKKGDLPEEATKEDNNAKPSENNPVMPGKQEEKSDEKPEDKSPEDTKMTYTDPNQNKKTSDSDESNNKSGSDESNNKSGSDESNKKSDSDESEKKSDSDESEKKLDSNDNKSGSDASENKKDESSETTDSKTEEKADQSGNQESDERSNEKKTDENTKNQGSNELLPSGGQSELLNETTTQTGSFSTQAAESKSETESQKSSKQSTGFNWKLCNVTAGPDYIPCLDNLKAIRNLKTTKHYEHRERQCPEDPPTCLVALPEGYKRPIEWPKSREKIWYSNVPHTKLAEYKGHQNWVKVTGEYLTFPGGGTQFKHGALHYIDTIQQSVPDIAWGKQTRVILDVGCGVASFGGFLFERDVLAMSFAPKDEHEAQVQFALERGIPAISAVMGTKRLPFPARVFDAIHCARCRVPWHIEGGKLLLELNRVLRPGGFFVWSATPIYQKLPEDVEIWNEMKALTKAMCWEVVSISRDKLNKVGIAVYKKPTSNECYEKRSKNEPSICQDYDDPNAAWNIPLQSCMHKAPVSSTERGSQWPGEWPERLSKSPYWLSNSEVGVYGKPAPEDFTADHEHWKRVVSKSYLNGIGIQWSNVRNVMDMRSVYGGFAAALRDLKIWVMNVVPVDSPDTLPIIYERGLFGIYHDWCESFSTYPRSYDLLHADHLFSKLKKRCKFEAVVAEVDRILRPEGKLIVRDTAETIKELESLVTSMQWEVRMTYTKDLQGILCVQKSMWRPTELETVEYAIGSIPNSRQ*