Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621090 | XP_003602595.1 | 99.441 | 358 | 2 | 0 | 1 | 358 | 1 | 358 | 0.0 | 741 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621090 | sp|I1M2U5|NAMT1_SOYBN | 61.383 | 347 | 133 | 1 | 12 | 358 | 10 | 355 | 2.73e-161 | 458 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0377900 | Msa0621090 | 0.832016 | 1.202105e-55 | -8.615850e-47 |
| Msa0378100 | Msa0621090 | 0.998343 | 2.251583e-262 | -8.615850e-47 |
| Msa0378110 | Msa0621090 | 0.834672 | 2.617169e-56 | -8.615850e-47 |
| Msa0473820 | Msa0621090 | 0.931020 | 6.996449e-94 | -8.615850e-47 |
| Msa0518060 | Msa0621090 | 0.933697 | 1.263212e-95 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621090 | MtrunA17_Chr3g0130011 | 99.441 | 358 | 2 | 0 | 1 | 358 | 1 | 358 | 0.0 | 741 |
| Msa0621090 | MtrunA17_Chr3g0130061 | 86.592 | 358 | 48 | 0 | 1 | 358 | 1 | 358 | 0.0 | 647 |
| Msa0621090 | MtrunA17_Chr2g0314271 | 58.790 | 347 | 142 | 1 | 12 | 358 | 9 | 354 | 4.72e-159 | 449 |
| Msa0621090 | MtrunA17_Chr3g0128011 | 37.429 | 350 | 210 | 6 | 14 | 358 | 72 | 417 | 7.86e-71 | 227 |
| Msa0621090 | MtrunA17_Chr5g0448091 | 36.286 | 350 | 215 | 5 | 14 | 358 | 17 | 363 | 2.12e-68 | 219 |
| Msa0621090 | MtrunA17_Chr8g0367441 | 36.207 | 348 | 207 | 7 | 20 | 358 | 36 | 377 | 9.14e-67 | 215 |
| Msa0621090 | MtrunA17_Chr7g0276411 | 33.913 | 345 | 219 | 4 | 20 | 358 | 21 | 362 | 4.40e-66 | 213 |
| Msa0621090 | MtrunA17_Chr8g0367491 | 33.908 | 348 | 221 | 5 | 17 | 358 | 32 | 376 | 1.31e-65 | 212 |
| Msa0621090 | MtrunA17_Chr8g0367451 | 34.557 | 327 | 205 | 5 | 20 | 340 | 35 | 358 | 3.21e-63 | 206 |
| Msa0621090 | MtrunA17_Chr1g0200491 | 36.267 | 375 | 210 | 11 | 2 | 358 | 9 | 372 | 7.47e-63 | 205 |
| Msa0621090 | MtrunA17_Chr7g0276401 | 33.523 | 352 | 228 | 4 | 10 | 358 | 27 | 375 | 1.15e-62 | 204 |
| Msa0621090 | MtrunA17_Chr7g0218211 | 36.314 | 369 | 216 | 9 | 2 | 358 | 8 | 369 | 1.57e-62 | 204 |
| Msa0621090 | MtrunA17_Chr1g0163611 | 35.457 | 361 | 217 | 9 | 9 | 358 | 15 | 370 | 7.44e-62 | 202 |
| Msa0621090 | MtrunA17_Chr8g0367501 | 33.618 | 351 | 216 | 8 | 14 | 355 | 16 | 358 | 2.29e-61 | 202 |
| Msa0621090 | MtrunA17_Chr1g0163601 | 35.734 | 361 | 216 | 9 | 9 | 358 | 15 | 370 | 3.11e-61 | 201 |
| Msa0621090 | MtrunA17_Chr7g0218131 | 36.658 | 371 | 212 | 11 | 2 | 358 | 9 | 370 | 1.02e-60 | 199 |
| Msa0621090 | MtrunA17_Chr7g0218181 | 36.261 | 353 | 203 | 8 | 17 | 358 | 26 | 367 | 3.90e-60 | 197 |
| Msa0621090 | MtrunA17_Chr7g0218271 | 34.316 | 373 | 223 | 9 | 2 | 358 | 9 | 375 | 3.57e-59 | 195 |
| Msa0621090 | MtrunA17_Chr1g0163621 | 35.556 | 360 | 218 | 8 | 9 | 358 | 29 | 384 | 5.27e-59 | 195 |
| Msa0621090 | MtrunA17_Chr2g0307521 | 35.246 | 366 | 219 | 10 | 3 | 358 | 6 | 363 | 1.94e-58 | 193 |
| Msa0621090 | MtrunA17_Chr7g0218261 | 35.310 | 371 | 216 | 12 | 2 | 358 | 8 | 368 | 2.56e-58 | 193 |
| Msa0621090 | MtrunA17_Chr3g0085201 | 38.567 | 293 | 167 | 6 | 73 | 358 | 71 | 357 | 1.17e-57 | 191 |
| Msa0621090 | MtrunA17_Chr7g0218301 | 37.288 | 295 | 170 | 6 | 73 | 358 | 87 | 375 | 3.97e-56 | 187 |
| Msa0621090 | MtrunA17_Chr3g0085211 | 37.543 | 293 | 170 | 6 | 73 | 358 | 84 | 370 | 4.87e-56 | 187 |
| Msa0621090 | MtrunA17_Chr8g0367381 | 35.647 | 317 | 170 | 8 | 20 | 327 | 36 | 327 | 3.04e-55 | 184 |
| Msa0621090 | MtrunA17_Chr4g0022021 | 33.146 | 356 | 225 | 9 | 7 | 355 | 16 | 365 | 9.29e-52 | 176 |
| Msa0621090 | MtrunA17_Chr8g0345851 | 35.606 | 264 | 167 | 3 | 95 | 358 | 30 | 290 | 2.17e-51 | 172 |
| Msa0621090 | MtrunA17_Chr4g0021981 | 32.022 | 356 | 229 | 9 | 7 | 355 | 16 | 365 | 6.44e-48 | 166 |
| Msa0621090 | MtrunA17_Chr6g0482291 | 41.398 | 186 | 99 | 3 | 173 | 358 | 1 | 176 | 9.52e-42 | 144 |
| Msa0621090 | MtrunA17_Chr3g0121301 | 29.787 | 329 | 214 | 11 | 32 | 354 | 40 | 357 | 5.85e-37 | 136 |
| Msa0621090 | MtrunA17_Chr1g0188391 | 27.976 | 336 | 222 | 10 | 31 | 355 | 32 | 358 | 1.17e-35 | 133 |
| Msa0621090 | MtrunA17_Chr7g0219161 | 29.283 | 321 | 209 | 9 | 31 | 343 | 32 | 342 | 2.45e-34 | 129 |
| Msa0621090 | MtrunA17_Chr7g0219141 | 29.573 | 328 | 210 | 10 | 31 | 350 | 32 | 346 | 1.38e-32 | 124 |
| Msa0621090 | MtrunA17_Chr7g0223241 | 28.024 | 339 | 214 | 11 | 29 | 356 | 29 | 348 | 2.65e-32 | 124 |
| Msa0621090 | MtrunA17_Chr5g0432251 | 27.500 | 320 | 218 | 8 | 31 | 343 | 32 | 344 | 5.63e-32 | 123 |
| Msa0621090 | MtrunA17_Chr4g0040621 | 29.143 | 350 | 223 | 12 | 12 | 346 | 18 | 357 | 7.18e-32 | 123 |
| Msa0621090 | MtrunA17_Chr1g0188371 | 28.213 | 319 | 212 | 9 | 29 | 338 | 30 | 340 | 8.56e-32 | 123 |
| Msa0621090 | MtrunA17_Chr7g0223231 | 28.235 | 340 | 212 | 11 | 29 | 356 | 29 | 348 | 1.39e-31 | 122 |
| Msa0621090 | MtrunA17_Chr4g0046531 | 27.647 | 340 | 221 | 9 | 29 | 357 | 392 | 717 | 3.32e-31 | 124 |
| Msa0621090 | MtrunA17_Chr4g0046531 | 29.721 | 323 | 212 | 9 | 29 | 345 | 30 | 343 | 1.01e-30 | 123 |
| Msa0621090 | MtrunA17_Chr4g0014561 | 30.172 | 348 | 221 | 11 | 24 | 357 | 23 | 362 | 3.51e-31 | 121 |
| Msa0621090 | MtrunA17_Chr5g0432301 | 27.747 | 364 | 243 | 12 | 2 | 357 | 8 | 359 | 6.14e-31 | 120 |
| Msa0621090 | MtrunA17_Chr5g0432241 | 28.125 | 352 | 229 | 12 | 2 | 343 | 8 | 345 | 6.21e-31 | 120 |
| Msa0621090 | MtrunA17_Chr4g0046361 | 28.487 | 337 | 223 | 11 | 31 | 357 | 32 | 360 | 7.28e-31 | 120 |
| Msa0621090 | MtrunA17_Chr4g0014681 | 29.885 | 348 | 222 | 11 | 24 | 357 | 23 | 362 | 4.87e-30 | 118 |
| Msa0621090 | MtrunA17_Chr4g0046341 | 29.118 | 340 | 220 | 10 | 31 | 357 | 32 | 363 | 6.93e-28 | 112 |
| Msa0621090 | MtrunA17_Chr8g0367401 | 46.364 | 110 | 58 | 1 | 150 | 259 | 2 | 110 | 1.55e-27 | 105 |
| Msa0621090 | MtrunA17_Chr5g0432211 | 26.225 | 347 | 228 | 11 | 2 | 343 | 7 | 330 | 7.42e-27 | 108 |
| Msa0621090 | MtrunA17_Chr4g0014641 | 28.319 | 339 | 223 | 10 | 31 | 357 | 32 | 362 | 2.18e-26 | 108 |
| Msa0621090 | MtrunA17_Chr5g0432261 | 28.213 | 319 | 189 | 13 | 31 | 343 | 28 | 312 | 1.10e-24 | 102 |
| Msa0621090 | MtrunA17_Chr1g0170941 | 55.844 | 77 | 33 | 1 | 181 | 257 | 1 | 76 | 7.91e-22 | 88.2 |
| Msa0621090 | MtrunA17_Chr4g0014661 | 27.964 | 329 | 219 | 11 | 24 | 343 | 23 | 342 | 2.04e-21 | 94.0 |
| Msa0621090 | MtrunA17_Chr4g0014591 | 27.660 | 329 | 220 | 11 | 24 | 343 | 23 | 342 | 1.63e-18 | 85.5 |
| Msa0621090 | MtrunA17_Chr7g0219171 | 31.343 | 134 | 86 | 2 | 227 | 357 | 117 | 247 | 1.74e-18 | 84.0 |
| Msa0621090 | MtrunA17_Chr8g0367471 | 55.738 | 61 | 26 | 1 | 181 | 241 | 9 | 68 | 9.83e-18 | 77.8 |
| Msa0621090 | MtrunA17_Chr8g0367461 | 37.500 | 112 | 69 | 1 | 247 | 358 | 2 | 112 | 1.34e-16 | 75.1 |
| Msa0621090 | MtrunA17_Chr8g0367421 | 35.455 | 110 | 53 | 1 | 150 | 259 | 2 | 93 | 5.61e-16 | 73.6 |
| Msa0621090 | MtrunA17_Chr8g0367391 | 35.514 | 107 | 62 | 3 | 255 | 358 | 32 | 134 | 6.66e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621090 | AT3G53140.1 | 57.550 | 351 | 145 | 1 | 12 | 358 | 9 | 359 | 4.63e-152 | 432 |
| Msa0621090 | AT5G54160.1 | 40.719 | 334 | 189 | 6 | 14 | 343 | 18 | 346 | 7.21e-76 | 238 |
| Msa0621090 | AT1G33030.1 | 34.985 | 343 | 214 | 7 | 23 | 358 | 10 | 350 | 4.18e-58 | 192 |
| Msa0621090 | AT1G51990.1 | 34.812 | 293 | 184 | 4 | 53 | 340 | 54 | 344 | 1.43e-57 | 191 |
| Msa0621090 | AT1G51990.2 | 35.154 | 293 | 183 | 4 | 53 | 340 | 54 | 344 | 5.82e-57 | 189 |
| Msa0621090 | AT1G77520.1 | 31.805 | 349 | 223 | 7 | 22 | 358 | 36 | 381 | 5.60e-53 | 179 |
| Msa0621090 | AT1G77530.1 | 34.091 | 352 | 211 | 10 | 22 | 358 | 36 | 381 | 4.07e-44 | 156 |
| Msa0621090 | AT1G21100.1 | 32.778 | 360 | 229 | 9 | 8 | 358 | 18 | 373 | 4.26e-41 | 148 |
| Msa0621090 | AT5G53810.1 | 33.025 | 324 | 201 | 8 | 29 | 339 | 39 | 359 | 1.32e-40 | 147 |
| Msa0621090 | AT1G63140.2 | 31.322 | 348 | 226 | 7 | 22 | 358 | 36 | 381 | 4.41e-40 | 145 |
| Msa0621090 | AT1G63140.4 | 31.322 | 348 | 226 | 7 | 22 | 358 | 56 | 401 | 8.52e-40 | 145 |
| Msa0621090 | AT1G21120.1 | 32.778 | 360 | 229 | 10 | 8 | 358 | 18 | 373 | 1.18e-39 | 144 |
| Msa0621090 | AT1G21130.1 | 32.222 | 360 | 231 | 9 | 8 | 358 | 18 | 373 | 1.33e-39 | 144 |
| Msa0621090 | AT1G21120.2 | 32.778 | 360 | 229 | 10 | 8 | 358 | 66 | 421 | 5.65e-39 | 144 |
| Msa0621090 | AT1G21110.1 | 32.222 | 360 | 231 | 9 | 8 | 358 | 18 | 373 | 8.55e-39 | 142 |
| Msa0621090 | AT1G76790.1 | 31.476 | 359 | 229 | 9 | 12 | 358 | 12 | 365 | 2.23e-38 | 140 |
| Msa0621090 | AT5G37170.2 | 38.660 | 194 | 115 | 4 | 167 | 358 | 43 | 234 | 5.25e-38 | 136 |
| Msa0621090 | AT5G37170.3 | 39.362 | 188 | 110 | 4 | 173 | 358 | 1 | 186 | 1.34e-37 | 134 |
| Msa0621090 | AT5G37170.1 | 38.660 | 194 | 115 | 4 | 167 | 358 | 143 | 334 | 6.48e-37 | 136 |
| Msa0621090 | AT1G62900.1 | 38.220 | 191 | 117 | 1 | 168 | 358 | 16 | 205 | 1.38e-34 | 126 |
| Msa0621090 | AT1G33030.3 | 34.263 | 251 | 157 | 6 | 23 | 266 | 10 | 259 | 4.34e-34 | 127 |
| Msa0621090 | AT1G33030.2 | 34.836 | 244 | 151 | 6 | 23 | 259 | 10 | 252 | 4.66e-34 | 127 |
| Msa0621090 | AT4G35160.1 | 29.752 | 363 | 234 | 10 | 1 | 348 | 15 | 371 | 6.46e-34 | 129 |
| Msa0621090 | AT4G35150.1 | 26.891 | 357 | 209 | 9 | 1 | 348 | 1 | 314 | 1.02e-30 | 119 |
| Msa0621090 | AT1G63140.1 | 32.129 | 249 | 156 | 7 | 22 | 259 | 56 | 302 | 1.17e-23 | 99.8 |
| Msa0621090 | AT1G21130.2 | 31.206 | 282 | 180 | 8 | 8 | 278 | 18 | 296 | 2.45e-22 | 95.9 |
| Msa0621090 | AT1G77530.2 | 32.314 | 229 | 140 | 7 | 22 | 238 | 36 | 261 | 2.13e-16 | 78.6 |
| Msa0621090 | AT1G63140.3 | 30.131 | 229 | 147 | 7 | 21 | 238 | 55 | 281 | 3.24e-14 | 72.8 |
Find 124 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGCGAGGCTTGCCATTT+TGG | 0.196493 | 4_2:+72996793 | Msa0621090:CDS |
| GTTGATGTTGGTGGCAATTC+TGG | 0.233978 | 4_2:+72997833 | Msa0621090:CDS |
| TCCGCCATTGGGACGGACTA+TGG | 0.310272 | 4_2:-72996933 | None:intergenic |
| TGATGATGGGGAAAATAATA+AGG | 0.319795 | 4_2:+73001431 | Msa0621090:three_prime_UTR |
| TAAAACAAACTCATTTCTTC+TGG | 0.323627 | 4_2:-72997728 | None:intergenic |
| AATTCAAGTACAGGCAAATA+AGG | 0.328492 | 4_2:-73001363 | None:intergenic |
| TATTTGTAAAGCCAACAAAT+TGG | 0.338396 | 4_2:+73001711 | Msa0621090:three_prime_UTR |
| AGAAATGTTCGAATTTCAAC+TGG | 0.348736 | 4_2:+73001628 | Msa0621090:three_prime_UTR |
| TGAAAGTACCTGAAGCTATA+TGG | 0.371128 | 4_2:+72996867 | Msa0621090:CDS |
| CCACCTTGCCATATAGCTTC+AGG | 0.378883 | 4_2:-72996875 | None:intergenic |
| TTGATGCCTTTGAGTATGTT+TGG | 0.379016 | 4_2:-72997887 | None:intergenic |
| GCAAGCCTCGCTTCACTTTG+AGG | 0.394145 | 4_2:-72996785 | None:intergenic |
| AACAAATTAGTAAACAATAA+TGG | 0.397360 | 4_2:+72996736 | Msa0621090:exon |
| AGTGGTGTGATAGATGTAAT+TGG | 0.399809 | 4_2:-72996524 | None:intergenic |
| AAAATTGATTCTTTGTGAAC+CGG | 0.399849 | 4_2:+73001173 | Msa0621090:CDS |
| CAGGCAAATAAGGATCAATA+TGG | 0.400215 | 4_2:-73001353 | None:intergenic |
| CCATTGCAACCAACGAAAGT+TGG | 0.400413 | 4_2:+73001595 | Msa0621090:three_prime_UTR |
| TCTTTGTGAACCGGTGTTGC+CGG | 0.403316 | 4_2:+73001182 | Msa0621090:CDS |
| TGGGGATGCTATCTTCATTA+AGG | 0.409531 | 4_2:+72998221 | Msa0621090:CDS |
| CATTGTTGGCGGCTGACATA+TGG | 0.414881 | 4_2:+73001235 | Msa0621090:CDS |
| TTCAGCGTCTCCTCCGCCAT+TGG | 0.420478 | 4_2:-72996945 | None:intergenic |
| AAGTTGTTTGAATTCTTCTT+CGG | 0.424797 | 4_2:-73001295 | None:intergenic |
| CATTGCAACCAACGAAAGTT+GGG | 0.438041 | 4_2:+73001596 | Msa0621090:three_prime_UTR |
| TAAAAGAACAAGAGCATTGT+TGG | 0.438527 | 4_2:+73001221 | Msa0621090:CDS |
| TTATTTAAACCTGATGGTGC+TGG | 0.448459 | 4_2:-72997117 | None:intergenic |
| AACGGCCATGCTCGCAGGTA+CGG | 0.451973 | 4_2:-72997620 | None:intergenic |
| TAGTAAACAATAATGGAGAA+TGG | 0.453157 | 4_2:+72996743 | Msa0621090:exon |
| AGTAAACAATAATGGAGAAT+GGG | 0.454231 | 4_2:+72996744 | Msa0621090:exon |
| TCAGCGTCTCCTCCGCCATT+GGG | 0.454837 | 4_2:-72996944 | None:intergenic |
| AATGACAATGTATAGAACTA+AGG | 0.459777 | 4_2:+73001260 | Msa0621090:CDS |
| CACTTGAATCAGTTCCGGCT+GGG | 0.462198 | 4_2:+72998202 | Msa0621090:CDS |
| CCTGCGAGCATGGCCGTTGG+TGG | 0.463499 | 4_2:+72997625 | Msa0621090:CDS |
| AATGTGTGCAAGTTCCAAAA+TGG | 0.463723 | 4_2:-72996807 | None:intergenic |
| AAACAACTTGGCATTTCTGC+TGG | 0.463760 | 4_2:+73001309 | Msa0621090:CDS |
| GAGAATTATGATGGCTTCAA+AGG | 0.465146 | 4_2:+72997797 | Msa0621090:CDS |
| GAATATAGTCATATTATAGT+AGG | 0.466952 | 4_2:+72996299 | Msa0621090:five_prime_UTR |
| TGTGGATGGTGCCAATTTGT+TGG | 0.467905 | 4_2:-73001722 | None:intergenic |
| CCAACTTTCGTTGGTTGCAA+TGG | 0.468729 | 4_2:-73001595 | None:intergenic |
| TTTCATAAATGAGCAGAAGA+AGG | 0.468809 | 4_2:+73001384 | Msa0621090:exon |
| TTACTCTCATCGGTCTGCTC+CGG | 0.470793 | 4_2:-73001201 | None:intergenic |
| TGATGCACTTGAATCAGTTC+CGG | 0.476408 | 4_2:+72998197 | Msa0621090:CDS |
| AGAATTTGAGAGGCAGAGAG+TGG | 0.478385 | 4_2:-72996908 | None:intergenic |
| CCACCAACGGCCATGCTCGC+AGG | 0.480027 | 4_2:-72997625 | None:intergenic |
| GATCTAAGCCCAACTTTCGT+TGG | 0.489521 | 4_2:-73001604 | None:intergenic |
| TGTGGTGCTTTATGTGATGA+TGG | 0.490617 | 4_2:+73001417 | Msa0621090:three_prime_UTR |
| TAGTATAAGTGGTGAGCAAA+CGG | 0.493082 | 4_2:-72996985 | None:intergenic |
| GCATATGCATATTGCACAAA+GGG | 0.496481 | 4_2:+72997704 | Msa0621090:CDS |
| CATTTATGAAATTCAAGTAC+AGG | 0.499673 | 4_2:-73001372 | None:intergenic |
| GAAATGTTGGAGAATTATGA+TGG | 0.500624 | 4_2:+72997788 | Msa0621090:CDS |
| TACAAGGCTCTTCCAGTGGC+CGG | 0.508003 | 4_2:+73001150 | Msa0621090:CDS |
| ACGGCCATGCTCGCAGGTAC+GGG | 0.509344 | 4_2:-72997619 | None:intergenic |
| TCTTCTGCACCTCAATATCC+AGG | 0.511364 | 4_2:+72997932 | Msa0621090:CDS |
| GCACTTGAATCAGTTCCGGC+TGG | 0.511694 | 4_2:+72998201 | Msa0621090:CDS |
| GAGAAGAGAGAGAAAGAGAG+TGG | 0.514272 | 4_2:-72996061 | None:intergenic |
| GTGGTGCTTTATGTGATGAT+GGG | 0.514769 | 4_2:+73001418 | Msa0621090:three_prime_UTR |
| GACTAATTACCTGGATATTG+AGG | 0.516427 | 4_2:-72997941 | None:intergenic |
| GGCCTTGCAAAGTTGTTACA+AGG | 0.518740 | 4_2:+73001134 | Msa0621090:CDS |
| AGGTGCAGAAGAGATCATAT+CGG | 0.519685 | 4_2:-72997921 | None:intergenic |
| TTCTCGAACGGTTCCACAGT+TGG | 0.522298 | 4_2:-72997665 | None:intergenic |
| TCCAACATTTCCCTCATGTA+GGG | 0.523535 | 4_2:-72997776 | None:intergenic |
| TCTCCGTGCAGCTTCTCGAA+CGG | 0.525123 | 4_2:-72997677 | None:intergenic |
| GCCCTACATGAGGGAAATGT+TGG | 0.530544 | 4_2:+72997775 | Msa0621090:CDS |
| CTGCGAGCATGGCCGTTGGT+GGG | 0.530884 | 4_2:+72997626 | Msa0621090:CDS |
| TGCAGTGGACAGTGTTAACA+TGG | 0.535443 | 4_2:+73001091 | Msa0621090:intron |
| TCGGTCTGCTCCGGCAACAC+CGG | 0.535499 | 4_2:-73001192 | None:intergenic |
| TGAATATTTATTCACAGTCA+AGG | 0.535698 | 4_2:-73001492 | None:intergenic |
| GGGCAATGACATCCCGGACA+TGG | 0.544215 | 4_2:-72997756 | None:intergenic |
| CAGGTCAGACCATCATCATC+GGG | 0.545460 | 4_2:-72997079 | None:intergenic |
| CGTCTCCTCCGCCATTGGGA+CGG | 0.546520 | 4_2:-72996940 | None:intergenic |
| GCTCTTGTTCCCGATGATGA+TGG | 0.547808 | 4_2:+72997070 | Msa0621090:CDS |
| AGATTTAATGTCACCGTGAG+GGG | 0.549852 | 4_2:-72996093 | None:intergenic |
| AGAAAGTTTAAGATATAATG+AGG | 0.552535 | 4_2:-72996491 | None:intergenic |
| AGGACCCGTACCTGCGAGCA+TGG | 0.558958 | 4_2:+72997615 | Msa0621090:intron |
| ATGACAATGTATAGAACTAA+GGG | 0.561414 | 4_2:+73001261 | Msa0621090:CDS |
| GGTGCAGAAGAGATCATATC+GGG | 0.566072 | 4_2:-72997920 | None:intergenic |
| AGCCTTGTAACAACTTTGCA+AGG | 0.570449 | 4_2:-73001136 | None:intergenic |
| ACAGGTCAGACCATCATCAT+CGG | 0.570773 | 4_2:-72997080 | None:intergenic |
| CATGTAGGGCAATGACATCC+CGG | 0.570892 | 4_2:-72997762 | None:intergenic |
| GCCGTTGGTGGGAGACGCAG+TGG | 0.570986 | 4_2:+72997637 | Msa0621090:CDS |
| ACTTGAATCAGTTCCGGCTG+GGG | 0.571520 | 4_2:+72998203 | Msa0621090:CDS |
| CTCCAACATTTCCCTCATGT+AGG | 0.575549 | 4_2:-72997777 | None:intergenic |
| TCCATAGTCCGTCCCAATGG+CGG | 0.577664 | 4_2:+72996932 | Msa0621090:CDS |
| ACTTGAGCAGCAATGGTGAA+AGG | 0.580995 | 4_2:+72997020 | Msa0621090:CDS |
| GTTGAGGACTTGAGCAGCAA+TGG | 0.582872 | 4_2:+72997013 | Msa0621090:CDS |
| AGCTTTACCGACATCGGTGA+GGG | 0.585301 | 4_2:-72997050 | None:intergenic |
| CTCTCCATAGTCCGTCCCAA+TGG | 0.588927 | 4_2:+72996929 | Msa0621090:CDS |
| AAGTACTCCCTCACCGATGT+CGG | 0.589045 | 4_2:+72997043 | Msa0621090:CDS |
| GAAGAAGAATTCAAACAACT+TGG | 0.589425 | 4_2:+73001297 | Msa0621090:CDS |
| GTGGAGACTCTAGTTGATGT+TGG | 0.592031 | 4_2:+72997821 | Msa0621090:CDS |
| GTACCTGAAGCTATATGGCA+AGG | 0.593518 | 4_2:+72996872 | Msa0621090:CDS |
| AAGAACAAGAGCATTGTTGG+CGG | 0.593672 | 4_2:+73001224 | Msa0621090:CDS |
| CAGATTTAATGTCACCGTGA+GGG | 0.597710 | 4_2:-72996094 | None:intergenic |
| GTTGGTGGGAGACGCAGTGG+AGG | 0.598693 | 4_2:+72997640 | Msa0621090:CDS |
| CAAATAAGGATCAATATGGA+AGG | 0.598974 | 4_2:-73001349 | None:intergenic |
| GGATGTCATTGCCCTACATG+AGG | 0.599139 | 4_2:+72997765 | Msa0621090:CDS |
| AAATATCCAAACATACTCAA+AGG | 0.599530 | 4_2:+72997881 | Msa0621090:CDS |
| ATAGTCCGTCCCAATGGCGG+AGG | 0.606262 | 4_2:+72996935 | Msa0621090:CDS |
| AACAAGAGCTTTACCGACAT+CGG | 0.606967 | 4_2:-72997056 | None:intergenic |
| TCCACTGCGTCTCCCACCAA+CGG | 0.608024 | 4_2:-72997638 | None:intergenic |
| ATGAAGATAGCATCCCCAGC+CGG | 0.608469 | 4_2:-72998216 | None:intergenic |
| TTATGATGGCTTCAAAGGTG+TGG | 0.610913 | 4_2:+72997802 | Msa0621090:CDS |
| GACAGATGAAGAATTCAAGA+AGG | 0.615326 | 4_2:+73001113 | Msa0621090:CDS |
| GATTTAATGTCACCGTGAGG+GGG | 0.616447 | 4_2:-72996092 | None:intergenic |
| GATGTCATTGCCCTACATGA+GGG | 0.616477 | 4_2:+72997766 | Msa0621090:CDS |
| TTGTTACAAGGCTCTTCCAG+TGG | 0.616923 | 4_2:+73001146 | Msa0621090:CDS |
| TGGTGCTTTATGTGATGATG+GGG | 0.620869 | 4_2:+73001419 | Msa0621090:three_prime_UTR |
| TTGGCTTTACAAATACGCAA+TGG | 0.625680 | 4_2:-73001703 | None:intergenic |
| GACTATGGAGAGAATTTGAG+AGG | 0.637733 | 4_2:-72996918 | None:intergenic |
| AGCATATGCATATTGCACAA+AGG | 0.638121 | 4_2:+72997703 | Msa0621090:CDS |
| GAACCGTTCGAGAAGCTGCA+CGG | 0.649830 | 4_2:+72997674 | Msa0621090:CDS |
| GTACCTGCGAGCATGGCCGT+TGG | 0.655083 | 4_2:+72997622 | Msa0621090:CDS |
| GAGCTTTACCGACATCGGTG+AGG | 0.661236 | 4_2:-72997051 | None:intergenic |
| TGAGCAAACGGAGGATACGT+TGG | 0.661794 | 4_2:-72996973 | None:intergenic |
| GAGACTCTAGTTGATGTTGG+TGG | 0.662906 | 4_2:+72997824 | Msa0621090:CDS |
| GAAGAAGGCTTTGAAGTGTG+TGG | 0.663450 | 4_2:+73001399 | Msa0621090:three_prime_UTR |
| GGAGAATGGGAAAGTTGCTG+TGG | 0.664770 | 4_2:+72996757 | Msa0621090:CDS |
| AGAACAGCATTAAGGGACGT+AGG | 0.670135 | 4_2:-72996839 | None:intergenic |
| CGCAGTGGAGGATCCAACTG+TGG | 0.674969 | 4_2:+72997652 | Msa0621090:CDS |
| CCTGAAGCTATATGGCAAGG+TGG | 0.693132 | 4_2:+72996875 | Msa0621090:CDS |
| TAAAGCCTCAAAGTGAAGCG+AGG | 0.698513 | 4_2:+72996780 | Msa0621090:CDS |
| TATAAGTGGTGAGCAAACGG+AGG | 0.715321 | 4_2:-72996982 | None:intergenic |
| GAAATGTTCGAATTTCAACT+GGG | 0.718821 | 4_2:+73001629 | Msa0621090:three_prime_UTR |
| TATATAGGTATAACACACGT+CGG | 0.727621 | 4_2:+72998171 | Msa0621090:intron |
| ATAGGTATAACACACGTCGG+TGG | 0.737739 | 4_2:+72998174 | Msa0621090:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAATTAAAAATTCTCA+AGG | + | chr4_2:72996468-72996487 | Msa0621090:five_prime_UTR | 10.0% |
| !! | ACAGTTATTATAATTATTAT+TGG | + | chr4_2:72997276-72997295 | Msa0621090:intron | 10.0% |
| !! | CAGTTATTATAATTATTATT+GGG | + | chr4_2:72997277-72997296 | Msa0621090:intron | 10.0% |
| !!! | TTTTTTAAATTAGACTAATT+AGG | - | chr4_2:72997995-72998014 | None:intergenic | 10.0% |
| !!! | ATAACCAAAATTTTATTATT+AGG | + | chr4_2:72998377-72998396 | Msa0621090:intron | 10.0% |
| !! | CATAAATAAAAAAACAATAA+TGG | - | chr4_2:72998944-72998963 | None:intergenic | 10.0% |
| !! | AAAATTTACATCATAATTTA+AGG | + | chr4_2:73000274-73000293 | Msa0621090:intron | 10.0% |
| !! | AAATTTACATCATAATTTAA+GGG | + | chr4_2:73000275-73000294 | Msa0621090:intron | 10.0% |
| !! | TCAAATACAAAAAAAAAAAT+TGG | + | chr4_2:73000426-73000445 | Msa0621090:intron | 10.0% |
| !! | AACAAATTAGTAAACAATAA+TGG | + | chr4_2:72996736-72996755 | Msa0621090:exon | 15.0% |
| !! | AAGAAGAAAAAAAAGATTAA+TGG | + | chr4_2:72997235-72997254 | Msa0621090:intron | 15.0% |
| !!! | CTAATATATTTTTTTAAGGA+TGG | - | chr4_2:72998051-72998070 | None:intergenic | 15.0% |
| !! | TCCTTAAAAAAATATATTAG+TGG | + | chr4_2:72998051-72998070 | Msa0621090:intron | 15.0% |
| !!! | TCCACTAATATATTTTTTTA+AGG | - | chr4_2:72998055-72998074 | None:intergenic | 15.0% |
| !!! | TTCAAATTATTTAACTTTTG+TGG | + | chr4_2:72998144-72998163 | Msa0621090:intron | 15.0% |
| !!! | TACTCCTAATAATAAAATTT+TGG | - | chr4_2:72998384-72998403 | None:intergenic | 15.0% |
| !!! | TACTTACTTTTTTGTTTTTT+TGG | + | chr4_2:72998483-72998502 | Msa0621090:intron | 15.0% |
| !!! | ACTTACTTTTTTGTTTTTTT+GGG | + | chr4_2:72998484-72998503 | Msa0621090:intron | 15.0% |
| !! | ATAAAAAAACAATAATGGTA+GGG | - | chr4_2:72998939-72998958 | None:intergenic | 15.0% |
| !! | AATAAAAAAACAATAATGGT+AGG | - | chr4_2:72998940-72998959 | None:intergenic | 15.0% |
| !!! | TTTTATTTATGTTACTATCA+TGG | + | chr4_2:72998953-72998972 | Msa0621090:intron | 15.0% |
| !! | TTTATTTATGTTACTATCAT+GGG | + | chr4_2:72998954-72998973 | Msa0621090:intron | 15.0% |
| !! | TTAGACTATTATAACAATAA+GGG | + | chr4_2:72999818-72999837 | Msa0621090:intron | 15.0% |
| !! | AATTTACATCATAATTTAAG+GGG | + | chr4_2:73000276-73000295 | Msa0621090:intron | 15.0% |
| !!! | TATTTTTTATAAGAAACTAG+CGG | - | chr4_2:73000475-73000494 | None:intergenic | 15.0% |
| !!! | AAAGTATCAAATGATATTTT+TGG | - | chr4_2:73000915-73000934 | None:intergenic | 15.0% |
| !! | GAATATAGTCATATTATAGT+AGG | + | chr4_2:72996299-72996318 | Msa0621090:five_prime_UTR | 20.0% |
| !!! | ATCGTTTTATGTTATTAACA+TGG | + | chr4_2:72996334-72996353 | Msa0621090:five_prime_UTR | 20.0% |
| !!! | AGAAAGTTTAAGATATAATG+AGG | - | chr4_2:72996494-72996513 | None:intergenic | 20.0% |
| !!! | TTTTTAATGTAATAGATGAG+TGG | - | chr4_2:72996545-72996564 | None:intergenic | 20.0% |
| !! | ATAAGTTTATTTAAACCTGA+TGG | - | chr4_2:72997126-72997145 | None:intergenic | 20.0% |
| !! | TATAATAACTGTGTATTTGT+TGG | - | chr4_2:72997268-72997287 | None:intergenic | 20.0% |
| !!! | TAATTTTGTGGAAATGAATA+TGG | + | chr4_2:72997318-72997337 | Msa0621090:intron | 20.0% |
| !! | TACAAAATCAACTTATAAGT+CGG | - | chr4_2:72997445-72997464 | None:intergenic | 20.0% |
| !!! | ACGAACTTGTTATAATATAT+GGG | - | chr4_2:72997506-72997525 | None:intergenic | 20.0% |
| !!! | AGGTAATTAGTCTATTTTTT+GGG | + | chr4_2:72997952-72997971 | Msa0621090:intron | 20.0% |
| !!! | TATATTTTTTTAAGGATGGT+CGG | - | chr4_2:72998047-72998066 | None:intergenic | 20.0% |
| !! | AATTTAATAAAATTAGTCCG+TGG | - | chr4_2:72998104-72998123 | None:intergenic | 20.0% |
| !!! | AAAATATTTTGGAGATAAGT+AGG | - | chr4_2:72998274-72998293 | None:intergenic | 20.0% |
| !!! | GCTAAAGTTGAAAAATATTT+TGG | - | chr4_2:72998285-72998304 | None:intergenic | 20.0% |
| !! | ATAAAAAAGTAAGTAGATAG+TGG | - | chr4_2:72998359-72998378 | None:intergenic | 20.0% |
| !! | TATGTTTGAACATTAGTTAT+TGG | - | chr4_2:72998422-72998441 | None:intergenic | 20.0% |
| !!! | TTTTAATTTATCTAAGGTGT+TGG | - | chr4_2:72998542-72998561 | None:intergenic | 20.0% |
| !! | AAAAAAAAATACAAAAGGTC+AGG | + | chr4_2:72998565-72998584 | Msa0621090:intron | 20.0% |
| !! | AAAAAAAATACAAAAGGTCA+GGG | + | chr4_2:72998566-72998585 | Msa0621090:intron | 20.0% |
| !! | TAAAAAAACAATAATGGTAG+GGG | - | chr4_2:72998938-72998957 | None:intergenic | 20.0% |
| !! | GTTAGACTATTATAACAATA+AGG | + | chr4_2:72999817-72999836 | Msa0621090:intron | 20.0% |
| !! | TAGACTATTATAACAATAAG+GGG | + | chr4_2:72999819-72999838 | Msa0621090:intron | 20.0% |
| !!! | TTTTTTTTCTCTCTTTTCAT+TGG | + | chr4_2:72999887-72999906 | Msa0621090:intron | 20.0% |
| !!! | TTTTCATTGGTCAAAAATAA+TGG | + | chr4_2:72999900-72999919 | Msa0621090:intron | 20.0% |
| !!! | TAATGATGATCTTGTTTTTT+TGG | - | chr4_2:73000580-73000599 | None:intergenic | 20.0% |
| !! | GTAAAATAAGCAAGATTATA+AGG | - | chr4_2:73000864-73000883 | None:intergenic | 20.0% |
| !!! | GATACTTTAGATTTTCTTTA+AGG | + | chr4_2:73000927-73000946 | Msa0621090:intron | 20.0% |
| ! | GTTAAAAAGTTGTTTGAAAG+TGG | - | chr4_2:72996579-72996598 | None:intergenic | 25.0% |
| ! | GCTATTTATAGAAAAACGAT+TGG | - | chr4_2:72996650-72996669 | None:intergenic | 25.0% |
| !! | TAGTAAACAATAATGGAGAA+TGG | + | chr4_2:72996743-72996762 | Msa0621090:exon | 25.0% |
| !! | AGTAAACAATAATGGAGAAT+GGG | + | chr4_2:72996744-72996763 | Msa0621090:exon | 25.0% |
| ! | CTCAACAAAAATAGTATAAG+TGG | - | chr4_2:72996999-72997018 | None:intergenic | 25.0% |
| !!! | CACTTATACTATTTTTGTTG+AGG | + | chr4_2:72996997-72997016 | Msa0621090:CDS | 25.0% |
| !!! | ACTAAGAGTACTTAATTTTG+TGG | + | chr4_2:72997306-72997325 | Msa0621090:intron | 25.0% |
| !!! | CACGAACTTGTTATAATATA+TGG | - | chr4_2:72997507-72997526 | None:intergenic | 25.0% |
| ! | TCAAAAAAAATCAAACGTAC+AGG | + | chr4_2:72997595-72997614 | Msa0621090:intron | 25.0% |
| ! | TAAAACAAACTCATTTCTTC+TGG | - | chr4_2:72997731-72997750 | None:intergenic | 25.0% |
| ! | AAATATCCAAACATACTCAA+AGG | + | chr4_2:72997881-72997900 | Msa0621090:CDS | 25.0% |
| ! | CAAAAAATAGACTAATTACC+TGG | - | chr4_2:72997953-72997972 | None:intergenic | 25.0% |
| !!! | CAGGTAATTAGTCTATTTTT+TGG | + | chr4_2:72997951-72997970 | Msa0621090:intron | 25.0% |
| ! | GTTAGATTGACAAATATTAG+AGG | + | chr4_2:72998020-72998039 | Msa0621090:intron | 25.0% |
| !!! | CATATCTCTATTTTTGAGAA+GGG | - | chr4_2:72998331-72998350 | None:intergenic | 25.0% |
| !!! | TCATATCTCTATTTTTGAGA+AGG | - | chr4_2:72998332-72998351 | None:intergenic | 25.0% |
| !! | TAGCAACCATTTTGTATTAT+GGG | - | chr4_2:72998451-72998470 | None:intergenic | 25.0% |
| !! | TTAGCAACCATTTTGTATTA+TGG | - | chr4_2:72998452-72998471 | None:intergenic | 25.0% |
| ! | ATAAATCTTGGTTTCTATGA+CGG | - | chr4_2:72998719-72998738 | None:intergenic | 25.0% |
| ! | ACCAAGATTTATGATATGTT+TGG | + | chr4_2:72998727-72998746 | Msa0621090:intron | 25.0% |
| ! | ACCAAACATATCATAAATCT+TGG | - | chr4_2:72998731-72998750 | None:intergenic | 25.0% |
| !! | TTATGATATGTTTGGTTCAA+AGG | + | chr4_2:72998735-72998754 | Msa0621090:intron | 25.0% |
| ! | AGATTGTATAAGGAAAGAAA+GGG | - | chr4_2:72999106-72999125 | None:intergenic | 25.0% |
| ! | AAGATTGTATAAGGAAAGAA+AGG | - | chr4_2:72999107-72999126 | None:intergenic | 25.0% |
| ! | AAAAATCAGACAAGGAAAAA+GGG | + | chr4_2:72999237-72999256 | Msa0621090:intron | 25.0% |
| !!! | TTGGACAATTTTATTTGGTT+GGG | - | chr4_2:72999411-72999430 | None:intergenic | 25.0% |
| !!! | ATTGGACAATTTTATTTGGT+TGG | - | chr4_2:72999412-72999431 | None:intergenic | 25.0% |
| !! | ATAAGTTAAGTTGTCTCATT+TGG | - | chr4_2:72999861-72999880 | None:intergenic | 25.0% |
| !!! | TTGTTTTATTTGTGACAATG+AGG | + | chr4_2:73000185-73000204 | Msa0621090:intron | 25.0% |
| !! | GATCTTTCTTTTCACTTATT+TGG | - | chr4_2:73000506-73000525 | None:intergenic | 25.0% |
| ! | TTCATAGTACTCACTAAATT+CGG | + | chr4_2:73000808-73000827 | Msa0621090:intron | 25.0% |
| ! | AAGCAAGATTATAAGGAATA+TGG | - | chr4_2:73000857-73000876 | None:intergenic | 25.0% |
| !!! | GTATAATTATTGTTTTGCAG+TGG | + | chr4_2:73001076-73001095 | Msa0621090:intron | 25.0% |
| !! | TTCACAAAGAATCAATTTTC+CGG | - | chr4_2:73001172-73001191 | None:intergenic | 25.0% |
| !! | AAAATTGATTCTTTGTGAAC+CGG | + | chr4_2:73001173-73001192 | Msa0621090:CDS | 25.0% |
| ! | AATGACAATGTATAGAACTA+AGG | + | chr4_2:73001260-73001279 | Msa0621090:CDS | 25.0% |
| ! | ATGACAATGTATAGAACTAA+GGG | + | chr4_2:73001261-73001280 | Msa0621090:CDS | 25.0% |
| ! | AAGTTGTTTGAATTCTTCTT+CGG | - | chr4_2:73001298-73001317 | None:intergenic | 25.0% |
| ! | CATTTATGAAATTCAAGTAC+AGG | - | chr4_2:73001375-73001394 | None:intergenic | 25.0% |
| ! | TGAATATTTATTCACAGTCA+AGG | - | chr4_2:73001495-73001514 | None:intergenic | 25.0% |
| ! | TATTTGTAAAGCCAACAAAT+TGG | + | chr4_2:73001711-73001730 | Msa0621090:three_prime_UTR | 25.0% |
| ATTAAATCTGGGTCATACAT+TGG | + | chr4_2:72996107-72996126 | Msa0621090:intron | 30.0% | |
| TTAAATCTGGGTCATACATT+GGG | + | chr4_2:72996108-72996127 | Msa0621090:intron | 30.0% | |
| !! | CATTTTGAGAACAGCATTAA+GGG | - | chr4_2:72996849-72996868 | None:intergenic | 30.0% |
| !! | TCATTTTGAGAACAGCATTA+AGG | - | chr4_2:72996850-72996869 | None:intergenic | 30.0% |
| TTCGATCACATCTAATAGTA+CGG | - | chr4_2:72997356-72997375 | None:intergenic | 30.0% | |
| AAAATCAACTTATAAGTCGG+AGG | - | chr4_2:72997442-72997461 | None:intergenic | 30.0% | |
| GAAATGTTGGAGAATTATGA+TGG | + | chr4_2:72997788-72997807 | Msa0621090:CDS | 30.0% | |
| AGACTAATTAGGTTCCAAAA+TGG | - | chr4_2:72997984-72998003 | None:intergenic | 30.0% | |
| AACCAAAAAACTAACATGGT+CGG | - | chr4_2:72998078-72998097 | None:intergenic | 30.0% | |
| GACAAACCAAAAAACTAACA+TGG | - | chr4_2:72998082-72998101 | None:intergenic | 30.0% | |
| !!! | TTAGTTTTTTGGTTTGTCCA+CGG | + | chr4_2:72998084-72998103 | Msa0621090:intron | 30.0% |
| ! | AACTTTTGTGGCATGTATAT+AGG | + | chr4_2:72998156-72998175 | Msa0621090:intron | 30.0% |
| TATATAGGTATAACACACGT+CGG | + | chr4_2:72998171-72998190 | Msa0621090:intron | 30.0% | |
| GAGGAAATCATATCTTACTA+TGG | - | chr4_2:72998309-72998328 | None:intergenic | 30.0% | |
| !!! | CTGGTTGGTTTAAAACTTTT+TGG | - | chr4_2:72998634-72998653 | None:intergenic | 30.0% |
| !!! | AAGTTTTAAACCAACCAGAA+AGG | + | chr4_2:72998636-72998655 | Msa0621090:intron | 30.0% |
| GATAATACAACCAACTCAAA+GGG | + | chr4_2:72998658-72998677 | Msa0621090:intron | 30.0% | |
| ATAATACAACCAACTCAAAG+GGG | + | chr4_2:72998659-72998678 | Msa0621090:intron | 30.0% | |
| TAAATCTTGGTTTCTATGAC+GGG | - | chr4_2:72998718-72998737 | None:intergenic | 30.0% | |
| AAGAATCACTTTCCATTGTT+TGG | + | chr4_2:72998790-72998809 | Msa0621090:intron | 30.0% | |
| ! | TGAGGAAACTCAACATTTTA+TGG | + | chr4_2:72998897-72998916 | Msa0621090:intron | 30.0% |
| ! | GAGGAAACTCAACATTTTAT+GGG | + | chr4_2:72998898-72998917 | Msa0621090:intron | 30.0% |
| GTGAAAGGAAAGATTGTATA+AGG | - | chr4_2:72999116-72999135 | None:intergenic | 30.0% | |
| ! | CTTTTTCCTTGTCTGATTTT+TGG | - | chr4_2:72999238-72999257 | None:intergenic | 30.0% |
| CAAAAATCAGACAAGGAAAA+AGG | + | chr4_2:72999236-72999255 | Msa0621090:intron | 30.0% | |
| !! | TGGACAATTTTATTTGGTTG+GGG | - | chr4_2:72999410-72999429 | None:intergenic | 30.0% |
| !! | TCGGATTGGACAATTTTATT+TGG | - | chr4_2:72999416-72999435 | None:intergenic | 30.0% |
| AAATAAAATTGTCCAATCCG+AGG | + | chr4_2:72999415-72999434 | Msa0621090:intron | 30.0% | |
| ! | CAACTAAATCTAAAGCTACA+CGG | + | chr4_2:72999461-72999480 | Msa0621090:intron | 30.0% |
| CAGTATATTATGCAGTACTT+CGG | - | chr4_2:72999784-72999803 | None:intergenic | 30.0% | |
| ! | TCTTGTTCTTTTACTCTCAT+CGG | - | chr4_2:73001214-73001233 | None:intergenic | 30.0% |
| !! | TAAAAGAACAAGAGCATTGT+TGG | + | chr4_2:73001221-73001240 | Msa0621090:CDS | 30.0% |
| GAAGAAGAATTCAAACAACT+TGG | + | chr4_2:73001297-73001316 | Msa0621090:CDS | 30.0% | |
| CAAATAAGGATCAATATGGA+AGG | - | chr4_2:73001352-73001371 | None:intergenic | 30.0% | |
| AATTCAAGTACAGGCAAATA+AGG | - | chr4_2:73001366-73001385 | None:intergenic | 30.0% | |
| TTTCATAAATGAGCAGAAGA+AGG | + | chr4_2:73001384-73001403 | Msa0621090:exon | 30.0% | |
| !! | TGATGATGGGGAAAATAATA+AGG | + | chr4_2:73001431-73001450 | Msa0621090:three_prime_UTR | 30.0% |
| GAGCTAAGATGCTAATTAAT+TGG | + | chr4_2:73001460-73001479 | Msa0621090:intron | 30.0% | |
| AGAAATGTTCGAATTTCAAC+TGG | + | chr4_2:73001628-73001647 | Msa0621090:three_prime_UTR | 30.0% | |
| GAAATGTTCGAATTTCAACT+GGG | + | chr4_2:73001629-73001648 | Msa0621090:three_prime_UTR | 30.0% | |
| TTGTCATTGCCATTGTATCT+GGG | - | chr4_2:72996156-72996175 | None:intergenic | 35.0% | |
| ATTGTCATTGCCATTGTATC+TGG | - | chr4_2:72996157-72996176 | None:intergenic | 35.0% | |
| ACAATAAGACATGACGACAA+GGG | - | chr4_2:72996242-72996261 | None:intergenic | 35.0% | |
| AGTGGTGTGATAGATGTAAT+TGG | - | chr4_2:72996527-72996546 | None:intergenic | 35.0% | |
| ! | AAGATTGTGTGTTTTCAGCA+GGG | - | chr4_2:72996697-72996716 | None:intergenic | 35.0% |
| ! | AAAGATTGTGTGTTTTCAGC+AGG | - | chr4_2:72996698-72996717 | None:intergenic | 35.0% |
| AATGTGTGCAAGTTCCAAAA+TGG | - | chr4_2:72996810-72996829 | None:intergenic | 35.0% | |
| !! | TGAAAGTACCTGAAGCTATA+TGG | + | chr4_2:72996867-72996886 | Msa0621090:CDS | 35.0% |
| TAGTATAAGTGGTGAGCAAA+CGG | - | chr4_2:72996988-72997007 | None:intergenic | 35.0% | |
| ! | TTATTTAAACCTGATGGTGC+TGG | - | chr4_2:72997120-72997139 | None:intergenic | 35.0% |
| AGCATATGCATATTGCACAA+AGG | + | chr4_2:72997703-72997722 | Msa0621090:CDS | 35.0% | |
| GCATATGCATATTGCACAAA+GGG | + | chr4_2:72997704-72997723 | Msa0621090:CDS | 35.0% | |
| !! | TTGTTTTATGCTTCCATGTC+CGG | + | chr4_2:72997743-72997762 | Msa0621090:CDS | 35.0% |
| GAGAATTATGATGGCTTCAA+AGG | + | chr4_2:72997797-72997816 | Msa0621090:CDS | 35.0% | |
| TTGATGCCTTTGAGTATGTT+TGG | - | chr4_2:72997890-72997909 | None:intergenic | 35.0% | |
| GACTAATTACCTGGATATTG+AGG | - | chr4_2:72997944-72997963 | None:intergenic | 35.0% | |
| !!! | TTTTTGGGTCACTACCATTT+TGG | + | chr4_2:72997967-72997986 | Msa0621090:intron | 35.0% |
| !!! | ATCTCTATTTTTGAGAAGGG+AGG | - | chr4_2:72998328-72998347 | None:intergenic | 35.0% |
| CATCAGCCCATAATACAAAA+TGG | + | chr4_2:72998442-72998461 | Msa0621090:intron | 35.0% | |
| !! | TTTATCTAAGGTGTTGGAGT+GGG | - | chr4_2:72998536-72998555 | None:intergenic | 35.0% |
| !! | ATTTATCTAAGGTGTTGGAG+TGG | - | chr4_2:72998537-72998556 | None:intergenic | 35.0% |
| ! | GTTGTATTATCCTTTCTGGT+TGG | - | chr4_2:72998649-72998668 | None:intergenic | 35.0% |
| GTTGGTTGTATTATCCTTTC+TGG | - | chr4_2:72998653-72998672 | None:intergenic | 35.0% | |
| GGATAATACAACCAACTCAA+AGG | + | chr4_2:72998657-72998676 | Msa0621090:intron | 35.0% | |
| TTGATTTATCCCCTTTGAGT+TGG | - | chr4_2:72998671-72998690 | None:intergenic | 35.0% | |
| TTGGTTCAAAGGAAAGAAAG+TGG | + | chr4_2:72998746-72998765 | Msa0621090:intron | 35.0% | |
| !! | TTTAGTGGGTTTCCAAACAA+TGG | - | chr4_2:72998805-72998824 | None:intergenic | 35.0% |
| TGTTTGGAAACCCACTAAAA+AGG | + | chr4_2:72998806-72998825 | Msa0621090:intron | 35.0% | |
| !! | AAAGTGGATTAGAAAGTTGG+AGG | - | chr4_2:72999041-72999060 | None:intergenic | 35.0% |
| !! | GAGAAAGTGGATTAGAAAGT+TGG | - | chr4_2:72999044-72999063 | None:intergenic | 35.0% |
| ! | TCGTTTGGTTTAAGAGAAAG+TGG | - | chr4_2:72999057-72999076 | None:intergenic | 35.0% |
| !!! | AGAGGATTGTTTTAGTCGTT+TGG | - | chr4_2:72999072-72999091 | None:intergenic | 35.0% |
| TCCAGTCTCTAACTTGATTT+GGG | - | chr4_2:72999282-72999301 | None:intergenic | 35.0% | |
| TTCCAGTCTCTAACTTGATT+TGG | - | chr4_2:72999283-72999302 | None:intergenic | 35.0% | |
| !! | CGTGTAGCTTTAGATTTAGT+TGG | - | chr4_2:72999463-72999482 | None:intergenic | 35.0% |
| TACACGGTTTAATCTCAACA+AGG | + | chr4_2:72999477-72999496 | Msa0621090:intron | 35.0% | |
| !!! | TTTGTGGTGGTTTTTTGTTG+TGG | - | chr4_2:72999542-72999561 | None:intergenic | 35.0% |
| !! | TTCAGACTTACTTGCTTTTG+TGG | - | chr4_2:72999558-72999577 | None:intergenic | 35.0% |
| ACCCAAACTCAGAATATATC+CGG | + | chr4_2:72999708-72999727 | Msa0621090:intron | 35.0% | |
| TCCGGATATATTCTGAGTTT+GGG | - | chr4_2:72999712-72999731 | None:intergenic | 35.0% | |
| ATCCGGATATATTCTGAGTT+TGG | - | chr4_2:72999713-72999732 | None:intergenic | 35.0% | |
| AACTCAGAATATATCCGGAT+CGG | + | chr4_2:72999713-72999732 | Msa0621090:intron | 35.0% | |
| TATTATGCAGTACTTCGGTT+TGG | - | chr4_2:72999779-72999798 | None:intergenic | 35.0% | |
| GTAATAGAAAACTCGTGTAG+TGG | + | chr4_2:73000157-73000176 | Msa0621090:intron | 35.0% | |
| AAATTGGATAGACAGCTTTG+TGG | + | chr4_2:73000442-73000461 | Msa0621090:intron | 35.0% | |
| ACGTGTTCAATACAATCAAG+TGG | + | chr4_2:73000686-73000705 | Msa0621090:intron | 35.0% | |
| CTGAAAACTAGCTGACAATA+GGG | + | chr4_2:73000721-73000740 | Msa0621090:intron | 35.0% | |
| GACAGATGAAGAATTCAAGA+AGG | + | chr4_2:73001113-73001132 | Msa0621090:CDS | 35.0% | |
| CAGGCAAATAAGGATCAATA+TGG | - | chr4_2:73001356-73001375 | None:intergenic | 35.0% | |
| !! | TTGGCTTTACAAATACGCAA+TGG | - | chr4_2:73001706-73001725 | None:intergenic | 35.0% |
| AGATTTAATGTCACCGTGAG+GGG | - | chr4_2:72996096-72996115 | None:intergenic | 40.0% | |
| CAGATTTAATGTCACCGTGA+GGG | - | chr4_2:72996097-72996116 | None:intergenic | 40.0% | |
| CTCACGGTGACATTAAATCT+GGG | + | chr4_2:72996096-72996115 | Msa0621090:intron | 40.0% | |
| GTGACATTAGATGTGTTGTG+TGG | + | chr4_2:72996130-72996149 | Msa0621090:intron | 40.0% | |
| ACAATGGCAATGACAATGTG+TGG | + | chr4_2:72996160-72996179 | Msa0621090:intron | 40.0% | |
| AATAAGACATGACGACAAGG+GGG | - | chr4_2:72996240-72996259 | None:intergenic | 40.0% | |
| CAATAAGACATGACGACAAG+GGG | - | chr4_2:72996241-72996260 | None:intergenic | 40.0% | |
| GACAATAAGACATGACGACA+AGG | - | chr4_2:72996243-72996262 | None:intergenic | 40.0% | |
| ! | AGATTGTGTGTTTTCAGCAG+GGG | - | chr4_2:72996696-72996715 | None:intergenic | 40.0% |
| GACTATGGAGAGAATTTGAG+AGG | - | chr4_2:72996921-72996940 | None:intergenic | 40.0% | |
| AACAAGAGCTTTACCGACAT+CGG | - | chr4_2:72997059-72997078 | None:intergenic | 40.0% | |
| ! | TGTTTTATGCTTCCATGTCC+GGG | + | chr4_2:72997744-72997763 | Msa0621090:CDS | 40.0% |
| TCCAACATTTCCCTCATGTA+GGG | - | chr4_2:72997779-72997798 | None:intergenic | 40.0% | |
| TTATGATGGCTTCAAAGGTG+TGG | + | chr4_2:72997802-72997821 | Msa0621090:CDS | 40.0% | |
| AGGTGCAGAAGAGATCATAT+CGG | - | chr4_2:72997924-72997943 | None:intergenic | 40.0% | |
| !!! | GACCGACCATGTTAGTTTTT+TGG | + | chr4_2:72998073-72998092 | Msa0621090:intron | 40.0% |
| TGATGCACTTGAATCAGTTC+CGG | + | chr4_2:72998197-72998216 | Msa0621090:CDS | 40.0% | |
| TGGGGATGCTATCTTCATTA+AGG | + | chr4_2:72998221-72998240 | Msa0621090:CDS | 40.0% | |
| TCAAAGGAAAGAAAGTGGTG+AGG | + | chr4_2:72998751-72998770 | Msa0621090:intron | 40.0% | |
| AGAAAGTGGTGAGGAAAGAA+AGG | + | chr4_2:72998760-72998779 | Msa0621090:intron | 40.0% | |
| TGGTGAGGAAAGAAAGGTTA+GGG | + | chr4_2:72998766-72998785 | Msa0621090:intron | 40.0% | |
| TTGGAAACCCACTAAAAAGG+TGG | + | chr4_2:72998809-72998828 | Msa0621090:intron | 40.0% | |
| !! | CTTTCCACCACCTTTTTAGT+GGG | - | chr4_2:72998819-72998838 | None:intergenic | 40.0% |
| ! | TCTTTCCACCACCTTTTTAG+TGG | - | chr4_2:72998820-72998839 | None:intergenic | 40.0% |
| GTGGAAAGAAAGAATGTGGT+GGG | + | chr4_2:72998831-72998850 | Msa0621090:intron | 40.0% | |
| ! | CGTGGAAAGATGTTTTGTGT+GGG | - | chr4_2:72998858-72998877 | None:intergenic | 40.0% |
| GTATAAGGAAAGAAAGGGAG+TGG | - | chr4_2:72999101-72999120 | None:intergenic | 40.0% | |
| GTGTGAGGAAAGATAGTGAA+AGG | - | chr4_2:72999131-72999150 | None:intergenic | 40.0% | |
| ! | GGTTGCAAAAAGAAAGTGTG+AGG | - | chr4_2:72999146-72999165 | None:intergenic | 40.0% |
| TGGGTATTCGTTCACCTTAA+GGG | - | chr4_2:72999176-72999195 | None:intergenic | 40.0% | |
| CACGAACCAAAAATCAGACA+AGG | + | chr4_2:72999229-72999248 | Msa0621090:intron | 40.0% | |
| AATCAGACAAGGAAAAAGGG+TGG | + | chr4_2:72999240-72999259 | Msa0621090:intron | 40.0% | |
| TCCCAAATCAAGTTAGAGAC+TGG | + | chr4_2:72999278-72999297 | Msa0621090:intron | 40.0% | |
| ! | GCTTCTGTGTCATTATGACT+TGG | - | chr4_2:72999336-72999355 | None:intergenic | 40.0% |
| ! | AGATTTAGTTGGCTTCCTGT+TGG | - | chr4_2:72999452-72999471 | None:intergenic | 40.0% |
| ACGGTTTAATCTCAACAAGG+TGG | + | chr4_2:72999480-72999499 | Msa0621090:intron | 40.0% | |
| ! | TTTGTTGTGGTTCGATCTCA+GGG | - | chr4_2:72999529-72999548 | None:intergenic | 40.0% |
| !! | TTTTGTTGTGGTTCGATCTC+AGG | - | chr4_2:72999530-72999549 | None:intergenic | 40.0% |
| !! | AGACTTACTTGCTTTTGTGG+TGG | - | chr4_2:72999555-72999574 | None:intergenic | 40.0% |
| ACAACATGGAAGCTTGTCAT+GGG | - | chr4_2:72999597-72999616 | None:intergenic | 40.0% | |
| AACAACATGGAAGCTTGTCA+TGG | - | chr4_2:72999598-72999617 | None:intergenic | 40.0% | |
| TCTTCCACGATTCAACAACA+TGG | - | chr4_2:72999611-72999630 | None:intergenic | 40.0% | |
| GGATATATTCTGAGTTTGGG+TGG | - | chr4_2:72999709-72999728 | None:intergenic | 40.0% | |
| ! | GAGATTGATAGCTCAGACAT+GGG | - | chr4_2:72999748-72999767 | None:intergenic | 40.0% |
| ! | TGAGATTGATAGCTCAGACA+TGG | - | chr4_2:72999749-72999768 | None:intergenic | 40.0% |
| TACAATCAAGTGGCTCAACT+AGG | + | chr4_2:73000696-73000715 | Msa0621090:intron | 40.0% | |
| GCTGAAAACTAGCTGACAAT+AGG | + | chr4_2:73000720-73000739 | Msa0621090:intron | 40.0% | |
| TGCTCATAAGTTAGCAAAGG+TGG | - | chr4_2:73000747-73000766 | None:intergenic | 40.0% | |
| GGTTGCTCATAAGTTAGCAA+AGG | - | chr4_2:73000750-73000769 | None:intergenic | 40.0% | |
| ! | AGCCTTGTAACAACTTTGCA+AGG | - | chr4_2:73001139-73001158 | None:intergenic | 40.0% |
| !! | AAGAACAAGAGCATTGTTGG+CGG | + | chr4_2:73001224-73001243 | Msa0621090:CDS | 40.0% |
| AAACAACTTGGCATTTCTGC+TGG | + | chr4_2:73001309-73001328 | Msa0621090:CDS | 40.0% | |
| TGTGGTGCTTTATGTGATGA+TGG | + | chr4_2:73001417-73001436 | Msa0621090:three_prime_UTR | 40.0% | |
| GTGGTGCTTTATGTGATGAT+GGG | + | chr4_2:73001418-73001437 | Msa0621090:three_prime_UTR | 40.0% | |
| ! | TGGTGCTTTATGTGATGATG+GGG | + | chr4_2:73001419-73001438 | Msa0621090:three_prime_UTR | 40.0% |
| CATTGCAACCAACGAAAGTT+GGG | + | chr4_2:73001596-73001615 | Msa0621090:three_prime_UTR | 40.0% | |
| GAGAAGAGAGAGAAAGAGAG+TGG | - | chr4_2:72996064-72996083 | None:intergenic | 45.0% | |
| GATTTAATGTCACCGTGAGG+GGG | - | chr4_2:72996095-72996114 | None:intergenic | 45.0% | |
| CCAGATTTAATGTCACCGTG+AGG | - | chr4_2:72996098-72996117 | None:intergenic | 45.0% | |
| CCTCACGGTGACATTAAATC+TGG | + | chr4_2:72996095-72996114 | Msa0621090:intron | 45.0% | |
| ATAAGACATGACGACAAGGG+GGG | - | chr4_2:72996239-72996258 | None:intergenic | 45.0% | |
| TAAAGCCTCAAAGTGAAGCG+AGG | + | chr4_2:72996780-72996799 | Msa0621090:CDS | 45.0% | |
| AGAACAGCATTAAGGGACGT+AGG | - | chr4_2:72996842-72996861 | None:intergenic | 45.0% | |
| GTACCTGAAGCTATATGGCA+AGG | + | chr4_2:72996872-72996891 | Msa0621090:CDS | 45.0% | |
| AGAATTTGAGAGGCAGAGAG+TGG | - | chr4_2:72996911-72996930 | None:intergenic | 45.0% | |
| TATAAGTGGTGAGCAAACGG+AGG | - | chr4_2:72996985-72997004 | None:intergenic | 45.0% | |
| ACTTGAGCAGCAATGGTGAA+AGG | + | chr4_2:72997020-72997039 | Msa0621090:CDS | 45.0% | |
| ACAGGTCAGACCATCATCAT+CGG | - | chr4_2:72997083-72997102 | None:intergenic | 45.0% | |
| CTGGACGAAAAATGATGCAC+AGG | - | chr4_2:72997101-72997120 | None:intergenic | 45.0% | |
| ! | ATTTTTCGTCCAGCACCATC+AGG | + | chr4_2:72997108-72997127 | Msa0621090:CDS | 45.0% |
| GATGTCATTGCCCTACATGA+GGG | + | chr4_2:72997766-72997785 | Msa0621090:CDS | 45.0% | |
| CTCCAACATTTCCCTCATGT+AGG | - | chr4_2:72997780-72997799 | None:intergenic | 45.0% | |
| ! | GTGGAGACTCTAGTTGATGT+TGG | + | chr4_2:72997821-72997840 | Msa0621090:CDS | 45.0% |
| ! | GAGACTCTAGTTGATGTTGG+TGG | + | chr4_2:72997824-72997843 | Msa0621090:CDS | 45.0% |
| !! | GTTGATGTTGGTGGCAATTC+TGG | + | chr4_2:72997833-72997852 | Msa0621090:CDS | 45.0% |
| GGTGCAGAAGAGATCATATC+GGG | - | chr4_2:72997923-72997942 | None:intergenic | 45.0% | |
| TCTTCTGCACCTCAATATCC+AGG | + | chr4_2:72997932-72997951 | Msa0621090:CDS | 45.0% | |
| ATAGGTATAACACACGTCGG+TGG | + | chr4_2:72998174-72998193 | Msa0621090:intron | 45.0% | |
| GTGGTGAGGAAAGAAAGGTT+AGG | + | chr4_2:72998765-72998784 | Msa0621090:intron | 45.0% | |
| GAAACCCACTAAAAAGGTGG+TGG | + | chr4_2:72998812-72998831 | Msa0621090:intron | 45.0% | |
| !! | GGTGGTGGAAAGAAAGAATG+TGG | + | chr4_2:72998827-72998846 | Msa0621090:intron | 45.0% |
| GGTGGAAAGAAAGAATGTGG+TGG | + | chr4_2:72998830-72998849 | Msa0621090:intron | 45.0% | |
| ! | GCGTGGAAAGATGTTTTGTG+TGG | - | chr4_2:72998859-72998878 | None:intergenic | 45.0% |
| !!! | CAATAATGGTAGGGGCGTTT+TGG | - | chr4_2:72998930-72998949 | None:intergenic | 45.0% |
| GAAAGGGAGTGGAAAGTAAG+AGG | - | chr4_2:72999090-72999109 | None:intergenic | 45.0% | |
| TGCAACCAAACAGACCCTTA+AGG | + | chr4_2:72999159-72999178 | Msa0621090:intron | 45.0% | |
| GTTCACCTTAAGGGTCTGTT+TGG | - | chr4_2:72999167-72999186 | None:intergenic | 45.0% | |
| GTGGGTATTCGTTCACCTTA+AGG | - | chr4_2:72999177-72999196 | None:intergenic | 45.0% | |
| !!! | TGATTTTTGGTTCGTGCTGC+AGG | - | chr4_2:72999225-72999244 | None:intergenic | 45.0% |
| AGTTAGAGACTGGAACGAGT+TGG | + | chr4_2:72999288-72999307 | Msa0621090:intron | 45.0% | |
| GTTAGAGACTGGAACGAGTT+GGG | + | chr4_2:72999289-72999308 | Msa0621090:intron | 45.0% | |
| TTAGAGACTGGAACGAGTTG+GGG | + | chr4_2:72999290-72999309 | Msa0621090:intron | 45.0% | |
| ! | TGGGGTTGATCACAACTAGT+TGG | - | chr4_2:72999392-72999411 | None:intergenic | 45.0% |
| !! | TGTTGGATTTGGTTTGGCCT+CGG | - | chr4_2:72999435-72999454 | None:intergenic | 45.0% |
| ! | GCTTCCTGTTGGATTTGGTT+TGG | - | chr4_2:72999441-72999460 | None:intergenic | 45.0% |
| ! | AGTTGGCTTCCTGTTGGATT+TGG | - | chr4_2:72999446-72999465 | None:intergenic | 45.0% |
| GGTGGCTTATGTATTCATGG+TGG | - | chr4_2:72999508-72999527 | None:intergenic | 45.0% | |
| CAGGGTGGCTTATGTATTCA+TGG | - | chr4_2:72999511-72999530 | None:intergenic | 45.0% | |
| GCTTCCATGTTGTTGAATCG+TGG | + | chr4_2:72999604-72999623 | Msa0621090:intron | 45.0% | |
| ! | ACTGTTGTTCGCGTGGTTTT+GGG | - | chr4_2:72999648-72999667 | None:intergenic | 45.0% |
| ! | TACTGTTGTTCGCGTGGTTT+TGG | - | chr4_2:72999649-72999668 | None:intergenic | 45.0% |
| AACTGTTACTGTTGTTCGCG+TGG | - | chr4_2:72999655-72999674 | None:intergenic | 45.0% | |
| TTCTGCAACACACACAACGA+CGG | + | chr4_2:72999673-72999692 | Msa0621090:intron | 45.0% | |
| TGCACGAAGACAAGCAAATG+AGG | - | chr4_2:73000771-73000790 | None:intergenic | 45.0% | |
| TGCAGTGGACAGTGTTAACA+TGG | + | chr4_2:73001091-73001110 | Msa0621090:intron | 45.0% | |
| GGCCTTGCAAAGTTGTTACA+AGG | + | chr4_2:73001134-73001153 | Msa0621090:CDS | 45.0% | |
| TTGTTACAAGGCTCTTCCAG+TGG | + | chr4_2:73001146-73001165 | Msa0621090:CDS | 45.0% | |
| ! | AGAATCAATTTTCCGGCCAC+TGG | - | chr4_2:73001165-73001184 | None:intergenic | 45.0% |
| !! | GAAGAAGGCTTTGAAGTGTG+TGG | + | chr4_2:73001399-73001418 | Msa0621090:three_prime_UTR | 45.0% |
| ! | CCAACTTTCGTTGGTTGCAA+TGG | - | chr4_2:73001598-73001617 | None:intergenic | 45.0% |
| CCATTGCAACCAACGAAAGT+TGG | + | chr4_2:73001595-73001614 | Msa0621090:three_prime_UTR | 45.0% | |
| GATCTAAGCCCAACTTTCGT+TGG | - | chr4_2:73001607-73001626 | None:intergenic | 45.0% | |
| ! | TGTGGATGGTGCCAATTTGT+TGG | - | chr4_2:73001725-73001744 | None:intergenic | 45.0% |
| !!! | TTTTAATTTTAATTTATCTA+AGG | - | chr4_2:72998548-72998567 | None:intergenic | 5.0% |
| !! | AATTAAAAAAAAAATACAAA+AGG | + | chr4_2:72998560-72998579 | Msa0621090:intron | 5.0% |
| !!! | TGTTTTATTTTATATATATA+AGG | + | chr4_2:72998979-72998998 | Msa0621090:intron | 5.0% |
| !!! | GTTTTATTTTATATATATAA+GGG | + | chr4_2:72998980-72998999 | Msa0621090:intron | 5.0% |
| GTTGTGTGGCCCAGATACAA+TGG | + | chr4_2:72996144-72996163 | Msa0621090:intron | 50.0% | |
| AATGTGTGGCCCAGATGCAA+TGG | + | chr4_2:72996174-72996193 | Msa0621090:intron | 50.0% | |
| TAAGACATGACGACAAGGGG+GGG | - | chr4_2:72996238-72996257 | None:intergenic | 50.0% | |
| GGAGAATGGGAAAGTTGCTG+TGG | + | chr4_2:72996757-72996776 | Msa0621090:CDS | 50.0% | |
| !! | TGAAGCGAGGCTTGCCATTT+TGG | + | chr4_2:72996793-72996812 | Msa0621090:CDS | 50.0% |
| CCACCTTGCCATATAGCTTC+AGG | - | chr4_2:72996878-72996897 | None:intergenic | 50.0% | |
| CCTGAAGCTATATGGCAAGG+TGG | + | chr4_2:72996875-72996894 | Msa0621090:CDS | 50.0% | |
| TGAGCAAACGGAGGATACGT+TGG | - | chr4_2:72996976-72996995 | None:intergenic | 50.0% | |
| GTTGAGGACTTGAGCAGCAA+TGG | + | chr4_2:72997013-72997032 | Msa0621090:CDS | 50.0% | |
| AAGTACTCCCTCACCGATGT+CGG | + | chr4_2:72997043-72997062 | Msa0621090:CDS | 50.0% | |
| AGCTTTACCGACATCGGTGA+GGG | - | chr4_2:72997053-72997072 | None:intergenic | 50.0% | |
| GCTCTTGTTCCCGATGATGA+TGG | + | chr4_2:72997070-72997089 | Msa0621090:CDS | 50.0% | |
| CAGGTCAGACCATCATCATC+GGG | - | chr4_2:72997082-72997101 | None:intergenic | 50.0% | |
| TTCTCGAACGGTTCCACAGT+TGG | - | chr4_2:72997668-72997687 | None:intergenic | 50.0% | |
| CATGTAGGGCAATGACATCC+CGG | - | chr4_2:72997765-72997784 | None:intergenic | 50.0% | |
| GGATGTCATTGCCCTACATG+AGG | + | chr4_2:72997765-72997784 | Msa0621090:CDS | 50.0% | |
| GCCCTACATGAGGGAAATGT+TGG | + | chr4_2:72997775-72997794 | Msa0621090:CDS | 50.0% | |
| CACTTGAATCAGTTCCGGCT+GGG | + | chr4_2:72998202-72998221 | Msa0621090:CDS | 50.0% | |
| ACTTGAATCAGTTCCGGCTG+GGG | + | chr4_2:72998203-72998222 | Msa0621090:CDS | 50.0% | |
| ATGAAGATAGCATCCCCAGC+CGG | - | chr4_2:72998219-72998238 | None:intergenic | 50.0% | |
| CACGCCAACAAGTGCAGAAA+GGG | + | chr4_2:72998874-72998893 | Msa0621090:intron | 50.0% | |
| CTCACCCTTTCTGCACTTGT+TGG | - | chr4_2:72998881-72998900 | None:intergenic | 50.0% | |
| CAACAAGTGCAGAAAGGGTG+AGG | + | chr4_2:72998879-72998898 | Msa0621090:intron | 50.0% | |
| !! | TGCTGCAGGTTTGTTGGGTT+GGG | - | chr4_2:72999211-72999230 | None:intergenic | 50.0% |
| ! | GTTCGTGCTGCAGGTTTGTT+GGG | - | chr4_2:72999216-72999235 | None:intergenic | 50.0% |
| !! | GATTTGGTTTGGCCTCGGAT+TGG | - | chr4_2:72999430-72999449 | None:intergenic | 50.0% |
| GAGGCCAAACCAAATCCAAC+AGG | + | chr4_2:72999434-72999453 | Msa0621090:intron | 50.0% | |
| ! | GTCATGGGTCTCGTTTGTTG+TGG | - | chr4_2:72999582-72999601 | None:intergenic | 50.0% |
| CGTGGAAGACATTGAAGCCA+TGG | + | chr4_2:72999622-72999641 | Msa0621090:intron | 50.0% | |
| ATAGCTCAGACATGGGTTCG+TGG | - | chr4_2:72999741-72999760 | None:intergenic | 50.0% | |
| !! | TCTTTGTGAACCGGTGTTGC+CGG | + | chr4_2:73001182-73001201 | Msa0621090:CDS | 50.0% |
| TTACTCTCATCGGTCTGCTC+CGG | - | chr4_2:73001204-73001223 | None:intergenic | 50.0% | |
| CATTGTTGGCGGCTGACATA+TGG | + | chr4_2:73001235-73001254 | Msa0621090:CDS | 50.0% | |
| TCTCTCTCTCAACCCCCTCA+CGG | + | chr4_2:72996080-72996099 | Msa0621090:five_prime_UTR | 55.0% | |
| ! | GTCACCGTGCCATTGCATCT+GGG | - | chr4_2:72996186-72996205 | None:intergenic | 55.0% |
| ! | TGTCACCGTGCCATTGCATC+TGG | - | chr4_2:72996187-72996206 | None:intergenic | 55.0% |
| GCAAGCCTCGCTTCACTTTG+AGG | - | chr4_2:72996788-72996807 | None:intergenic | 55.0% | |
| CTCTCCATAGTCCGTCCCAA+TGG | + | chr4_2:72996929-72996948 | Msa0621090:CDS | 55.0% | |
| TCCATAGTCCGTCCCAATGG+CGG | + | chr4_2:72996932-72996951 | Msa0621090:CDS | 55.0% | |
| GAGCTTTACCGACATCGGTG+AGG | - | chr4_2:72997054-72997073 | None:intergenic | 55.0% | |
| GAACCGTTCGAGAAGCTGCA+CGG | + | chr4_2:72997674-72997693 | Msa0621090:CDS | 55.0% | |
| TCTCCGTGCAGCTTCTCGAA+CGG | - | chr4_2:72997680-72997699 | None:intergenic | 55.0% | |
| GCACTTGAATCAGTTCCGGC+TGG | + | chr4_2:72998201-72998220 | Msa0621090:CDS | 55.0% | |
| ! | CCTTTCTGCACTTGTTGGCG+TGG | - | chr4_2:72998876-72998895 | None:intergenic | 55.0% |
| CCACGCCAACAAGTGCAGAA+AGG | + | chr4_2:72998873-72998892 | Msa0621090:intron | 55.0% | |
| ! | GGTTGGGTTGTGCTTGTGGT+GGG | - | chr4_2:72999195-72999214 | None:intergenic | 55.0% |
| !! | GTTGGGTTGGGTTGTGCTTG+TGG | - | chr4_2:72999199-72999218 | None:intergenic | 55.0% |
| !! | GTGCTGCAGGTTTGTTGGGT+TGG | - | chr4_2:72999212-72999231 | None:intergenic | 55.0% |
| GGTTCGTGCTGCAGGTTTGT+TGG | - | chr4_2:72999217-72999236 | None:intergenic | 55.0% | |
| GTTGTGGTTCGATCTCAGGG+TGG | - | chr4_2:72999526-72999545 | None:intergenic | 55.0% | |
| TACAAGGCTCTTCCAGTGGC+CGG | + | chr4_2:73001150-73001169 | Msa0621090:CDS | 55.0% | |
| GTGGCCCAGATGCAATGGCA+CGG | + | chr4_2:72996179-72996198 | Msa0621090:intron | 60.0% | |
| TGACGACAAGGGGGGGTTGA+GGG | - | chr4_2:72996231-72996250 | None:intergenic | 60.0% | |
| ATGACGACAAGGGGGGGTTG+AGG | - | chr4_2:72996232-72996251 | None:intergenic | 60.0% | |
| !! | TCCGCCATTGGGACGGACTA+TGG | - | chr4_2:72996936-72996955 | None:intergenic | 60.0% |
| ATAGTCCGTCCCAATGGCGG+AGG | + | chr4_2:72996935-72996954 | Msa0621090:CDS | 60.0% | |
| TCAGCGTCTCCTCCGCCATT+GGG | - | chr4_2:72996947-72996966 | None:intergenic | 60.0% | |
| TTCAGCGTCTCCTCCGCCAT+TGG | - | chr4_2:72996948-72996967 | None:intergenic | 60.0% | |
| AACGGCCATGCTCGCAGGTA+CGG | - | chr4_2:72997623-72997642 | None:intergenic | 60.0% | |
| TCCACTGCGTCTCCCACCAA+CGG | - | chr4_2:72997641-72997660 | None:intergenic | 60.0% | |
| CGCAGTGGAGGATCCAACTG+TGG | + | chr4_2:72997652-72997671 | Msa0621090:CDS | 60.0% | |
| GGGCAATGACATCCCGGACA+TGG | - | chr4_2:72997759-72997778 | None:intergenic | 60.0% | |
| ! | GGGTTGGGTTGTGCTTGTGG+TGG | - | chr4_2:72999196-72999215 | None:intergenic | 60.0% |
| !!! | GTTCGCGTGGTTTTGGGCCA+TGG | - | chr4_2:72999642-72999661 | None:intergenic | 60.0% |
| !! | ATGGGTTCGTGGCACCGATC+CGG | - | chr4_2:72999730-72999749 | None:intergenic | 60.0% |
| GGGGTTGAGGGGTGGCACTT+TGG | - | chr4_2:72996219-72996238 | None:intergenic | 65.0% | |
| GACGACAAGGGGGGGTTGAG+GGG | - | chr4_2:72996230-72996249 | None:intergenic | 65.0% | |
| CGTCTCCTCCGCCATTGGGA+CGG | - | chr4_2:72996943-72996962 | None:intergenic | 65.0% | |
| AGGACCCGTACCTGCGAGCA+TGG | + | chr4_2:72997615-72997634 | Msa0621090:intron | 65.0% | |
| ACGGCCATGCTCGCAGGTAC+GGG | - | chr4_2:72997622-72997641 | None:intergenic | 65.0% | |
| GTACCTGCGAGCATGGCCGT+TGG | + | chr4_2:72997622-72997641 | Msa0621090:CDS | 65.0% | |
| CTGCGAGCATGGCCGTTGGT+GGG | + | chr4_2:72997626-72997645 | Msa0621090:CDS | 65.0% | |
| ! | GTTGGTGGGAGACGCAGTGG+AGG | + | chr4_2:72997640-72997659 | Msa0621090:CDS | 65.0% |
| TCGGTCTGCTCCGGCAACAC+CGG | - | chr4_2:73001195-73001214 | None:intergenic | 65.0% | |
| GACAAGGGGGGGTTGAGGGG+TGG | - | chr4_2:72996227-72996246 | None:intergenic | 70.0% | |
| CCACCAACGGCCATGCTCGC+AGG | - | chr4_2:72997628-72997647 | None:intergenic | 70.0% | |
| CCTGCGAGCATGGCCGTTGG+TGG | + | chr4_2:72997625-72997644 | Msa0621090:CDS | 70.0% | |
| ! | GCCGTTGGTGGGAGACGCAG+TGG | + | chr4_2:72997637-72997656 | Msa0621090:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 72996004 | 73001747 | 72996004 | ID=Msa0621090;Name=Msa0621090 |
| chr4_2 | mRNA | 72996004 | 73001747 | 72996004 | ID=Msa0621090-mRNA-1;Parent=Msa0621090;Name=Msa0621090-mRNA-1;_AED=0.09;_eAED=0.09;_QI=605|1|1|1|0.6|0.33|6|325|358 |
| chr4_2 | exon | 72996004 | 72996101 | 72996004 | ID=Msa0621090-mRNA-1:exon:21870;Parent=Msa0621090-mRNA-1 |
| chr4_2 | exon | 72996248 | 72997129 | 72996248 | ID=Msa0621090-mRNA-1:exon:21871;Parent=Msa0621090-mRNA-1 |
| chr4_2 | exon | 72997617 | 72997953 | 72997617 | ID=Msa0621090-mRNA-1:exon:21872;Parent=Msa0621090-mRNA-1 |
| chr4_2 | exon | 72998178 | 72998242 | 72998178 | ID=Msa0621090-mRNA-1:exon:21873;Parent=Msa0621090-mRNA-1 |
| chr4_2 | exon | 73001096 | 73001457 | 73001096 | ID=Msa0621090-mRNA-1:exon:21874;Parent=Msa0621090-mRNA-1 |
| chr4_2 | exon | 73001485 | 73001747 | 73001485 | ID=Msa0621090-mRNA-1:exon:21875;Parent=Msa0621090-mRNA-1 |
| chr4_2 | five_prime_UTR | 72996004 | 72996101 | 72996004 | ID=Msa0621090-mRNA-1:five_prime_utr;Parent=Msa0621090-mRNA-1 |
| chr4_2 | five_prime_UTR | 72996248 | 72996754 | 72996248 | ID=Msa0621090-mRNA-1:five_prime_utr;Parent=Msa0621090-mRNA-1 |
| chr4_2 | CDS | 72996755 | 72997129 | 72996755 | ID=Msa0621090-mRNA-1:cds;Parent=Msa0621090-mRNA-1 |
| chr4_2 | CDS | 72997617 | 72997953 | 72997617 | ID=Msa0621090-mRNA-1:cds;Parent=Msa0621090-mRNA-1 |
| chr4_2 | CDS | 72998178 | 72998242 | 72998178 | ID=Msa0621090-mRNA-1:cds;Parent=Msa0621090-mRNA-1 |
| chr4_2 | CDS | 73001096 | 73001395 | 73001096 | ID=Msa0621090-mRNA-1:cds;Parent=Msa0621090-mRNA-1 |
| chr4_2 | three_prime_UTR | 73001396 | 73001457 | 73001396 | ID=Msa0621090-mRNA-1:three_prime_utr;Parent=Msa0621090-mRNA-1 |
| chr4_2 | three_prime_UTR | 73001485 | 73001747 | 73001485 | ID=Msa0621090-mRNA-1:three_prime_utr;Parent=Msa0621090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
