AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0622280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0622280 MtrunA17_Chr7g0269541 97.491 558 9 2 1 554 1 557 0.0 1115
Msa0622280 MtrunA17_Chr8g0345281 50.662 529 239 8 41 553 67 589 1.77e-178 516
Msa0622280 MtrunA17_Chr1g0147051 43.345 586 287 10 4 554 33 608 4.67e-168 490
Msa0622280 MtrunA17_Chr3g0126771 46.970 528 250 7 46 554 82 598 4.10e-166 484
Msa0622280 MtrunA17_Chr4g0011791 47.417 542 247 14 9 549 1 505 4.97e-161 468
Msa0622280 MtrunA17_Chr4g0011771 48.814 506 229 11 46 549 32 509 3.19e-160 466
Msa0622280 MtrunA17_Chr7g0233771 47.610 523 244 9 42 553 51 554 4.64e-160 468
Msa0622280 MtrunA17_Chr7g0233831 45.688 545 272 9 14 549 22 551 3.37e-157 460
Msa0622280 MtrunA17_Chr1g0192331 45.725 538 243 11 31 549 17 524 8.78e-154 451
Msa0622280 MtrunA17_Chr1g0195301 50.625 480 206 9 96 549 77 551 1.37e-153 451
Msa0622280 MtrunA17_Chr1g0195321 50.625 480 206 9 96 549 77 551 1.37e-153 451
Msa0622280 MtrunA17_Chr1g0195331 51.042 480 204 9 96 549 77 551 1.73e-153 451
Msa0622280 MtrunA17_Chr1g0175661 51.277 470 198 10 109 553 95 558 4.31e-153 450
Msa0622280 MtrunA17_Chr8g0391291 44.808 520 255 8 45 549 33 535 1.71e-151 445
Msa0622280 MtrunA17_Chr8g0391311 45.541 527 241 10 45 549 35 537 1.73e-151 445
Msa0622280 MtrunA17_Chr4g0069841 48.643 442 210 5 110 549 86 512 1.82e-151 444
Msa0622280 MtrunA17_Chr2g0302021 48.643 442 213 5 110 549 92 521 3.01e-151 444
Msa0622280 MtrunA17_Chr7g0269511 47.092 533 243 10 44 549 40 560 3.86e-151 445
Msa0622280 MtrunA17_Chr7g0269531 47.015 536 251 11 43 554 40 566 7.91e-150 442
Msa0622280 MtrunA17_Chr8g0354911 45.234 535 260 10 45 549 77 608 2.10e-149 442
Msa0622280 MtrunA17_Chr1g0195351 50.417 480 205 10 96 549 77 549 3.23e-149 440
Msa0622280 MtrunA17_Chr3g0080381 45.055 546 249 9 44 549 90 624 3.10e-148 440
Msa0622280 MtrunA17_Chr7g0272141 40.180 555 308 6 12 554 1 543 1.47e-147 435
Msa0622280 MtrunA17_Chr7g0233801 44.038 520 266 9 42 553 51 553 3.62e-146 432
Msa0622280 MtrunA17_Chr7g0269521 45.756 542 247 11 43 553 37 562 1.43e-145 431
Msa0622280 MtrunA17_Chr4g0069881 43.902 533 264 13 28 549 23 531 2.00e-143 424
Msa0622280 MtrunA17_Chr3g0079341 48.182 440 207 7 113 549 102 523 4.37e-141 418
Msa0622280 MtrunA17_Chr3g0090091 48.073 441 208 8 113 549 101 524 1.36e-140 417
Msa0622280 MtrunA17_Chr3g0079351 47.955 440 208 7 113 549 102 523 1.42e-140 417
Msa0622280 MtrunA17_Chr3g0079361 47.955 440 208 7 113 549 102 523 3.76e-140 416
Msa0622280 MtrunA17_Chr4g0069861 45.089 448 221 5 110 549 83 513 5.18e-140 415
Msa0622280 MtrunA17_Chr4g0018371 49.099 444 205 7 112 549 107 535 1.61e-138 412
Msa0622280 MtrunA17_Chr4g0011751 43.665 513 243 9 50 550 8 486 1.76e-138 410
Msa0622280 MtrunA17_Chr8g0354901 42.476 525 272 9 37 549 71 577 4.45e-137 410
Msa0622280 MtrunA17_Chr3g0080391 41.765 510 283 6 43 549 72 570 1.13e-135 406
Msa0622280 MtrunA17_Chr8g0345211 41.233 519 287 7 37 549 72 578 1.87e-127 385
Msa0622280 MtrunA17_Chr1g0195311 65.517 261 89 1 289 549 51 310 4.03e-125 369
Msa0622280 MtrunA17_Chr4g0069891 39.394 528 301 8 36 553 75 593 1.26e-123 375
Msa0622280 MtrunA17_Chr1g0192311 38.095 525 312 7 36 553 52 570 1.45e-118 362
Msa0622280 MtrunA17_Chr1g0192281 38.095 525 312 7 36 553 52 570 1.45e-118 362
Msa0622280 MtrunA17_Chr1g0192301 38.506 522 307 8 36 550 58 572 1.26e-117 360
Msa0622280 MtrunA17_Chr1g0194091 39.565 460 260 5 108 549 106 565 4.68e-117 358
Msa0622280 MtrunA17_Chr1g0192321 41.935 465 244 8 108 549 118 579 1.46e-116 357
Msa0622280 MtrunA17_Chr4g0000121 37.905 525 312 8 36 553 40 557 2.31e-116 356
Msa0622280 MtrunA17_Chr7g0272151 36.632 576 321 14 9 549 13 579 4.70e-111 343
Msa0622280 MtrunA17_Chr1g0194081 40.000 460 252 6 108 551 110 561 6.78e-110 339
Msa0622280 MtrunA17_Chr7g0270691 34.790 572 321 15 4 550 2 546 1.11e-108 335
Msa0622280 MtrunA17_Chr2g0302001 56.800 250 107 1 300 549 185 433 2.44e-103 318
Msa0622280 MtrunA17_Chr2g0295531 33.698 549 338 8 9 551 16 544 1.72e-102 322
Msa0622280 MtrunA17_Chr3g0129921 33.216 566 327 10 9 546 15 557 7.43e-102 318
Msa0622280 MtrunA17_Chr2g0295551 36.047 516 307 7 46 551 60 562 7.51e-102 318
Msa0622280 MtrunA17_Chr7g0270651 35.888 535 306 7 46 551 46 572 6.04e-101 316
Msa0622280 MtrunA17_Chr7g0270661 38.116 467 262 5 110 551 108 572 2.08e-100 315
Msa0622280 MtrunA17_Chr7g0270671 38.116 467 262 5 110 551 108 572 2.08e-100 315
Msa0622280 MtrunA17_Chr4g0067601 35.182 523 317 9 39 549 56 568 2.74e-100 315
Msa0622280 MtrunA17_Chr4g0067611 34.816 517 317 9 46 551 63 570 4.90e-100 314
Msa0622280 MtrunA17_Chr8g0384121 36.723 531 277 17 43 545 57 556 1.70e-99 312
Msa0622280 MtrunA17_Chr7g0234711 59.912 227 90 1 324 549 39 265 1.11e-97 297
Msa0622280 MtrunA17_Chr7g0270631 37.607 468 267 4 110 553 96 562 2.18e-93 308
Msa0622280 MtrunA17_Chr7g0270631 34.161 483 271 7 110 551 644 1120 1.56e-81 276
Msa0622280 MtrunA17_Chr2g0295541 34.124 548 305 9 46 551 60 593 1.99e-91 292
Msa0622280 MtrunA17_Chr2g0301931 50.000 284 137 3 270 553 14 292 4.68e-91 281
Msa0622280 MtrunA17_Chr8g0380581 40.057 352 200 7 203 549 27 372 2.73e-86 272
Msa0622280 MtrunA17_Chr5g0437831 40.774 336 194 4 217 549 46 379 1.10e-84 268
Msa0622280 MtrunA17_Chr2g0334111 41.049 324 177 4 231 553 13 323 1.32e-80 255
Msa0622280 MtrunA17_Chr7g0268241 41.875 320 174 4 231 549 38 346 1.02e-77 249
Msa0622280 MtrunA17_Chr7g0271381 28.881 554 343 14 12 549 34 552 6.30e-63 216
Msa0622280 MtrunA17_Chr6g0487101 36.905 336 183 8 222 543 61 381 1.15e-58 200
Msa0622280 MtrunA17_Chr6g0453551 36.275 306 171 5 241 536 4 295 4.49e-56 191
Msa0622280 MtrunA17_Chr8g0389771 36.808 307 166 7 251 544 88 379 1.75e-55 191
Msa0622280 MtrunA17_Chr7g0258341 35.191 341 191 7 214 544 69 389 2.66e-55 191
Msa0622280 MtrunA17_Chr8g0391261 56.296 135 59 0 415 549 28 162 4.06e-51 172
Msa0622280 MtrunA17_Chr7g0217941 35.762 302 170 4 245 536 8 295 3.10e-50 175
Msa0622280 MtrunA17_Chr1g0194311 34.862 327 186 7 228 544 61 370 5.33e-50 176
Msa0622280 MtrunA17_Chr4g0070051 32.248 307 180 8 245 542 56 343 2.93e-45 163
Msa0622280 MtrunA17_Chr6g0466961 33.813 278 161 4 243 515 40 299 1.04e-44 160
Msa0622280 MtrunA17_Chr6g0466951 33.094 278 163 5 243 515 69 328 1.32e-44 161
Msa0622280 MtrunA17_Chr2g0299431 39.592 245 121 7 217 448 28 258 1.87e-43 156
Msa0622280 MtrunA17_Chr5g0446301 34.641 306 173 7 249 542 67 357 2.43e-41 152
Msa0622280 MtrunA17_Chr7g0265201 32.573 307 180 6 243 542 99 385 3.06e-41 153
Msa0622280 MtrunA17_Chr2g0294321 30.693 303 185 7 248 542 61 346 1.64e-40 150
Msa0622280 MtrunA17_Chr5g0399221 28.358 335 202 7 223 545 54 362 2.28e-39 147
Msa0622280 MtrunA17_Chr1g0161731 30.986 284 176 4 239 515 45 315 7.74e-38 142
Msa0622280 MtrunA17_Chr8g0351871 30.000 310 189 6 243 543 33 323 5.21e-37 140
Msa0622280 MtrunA17_Chr5g0440871 29.712 313 200 5 232 544 28 320 6.80e-37 139
Msa0622280 MtrunA17_Chr2g0295851 29.470 302 181 8 248 542 60 336 1.65e-35 136
Msa0622280 MtrunA17_Chr4g0037751 29.373 303 195 7 245 542 73 361 2.82e-34 133
Msa0622280 MtrunA17_Chr5g0420831 30.164 305 190 7 245 542 73 361 2.85e-34 133
Msa0622280 MtrunA17_Chr8g0391281 33.444 302 155 10 45 324 33 310 1.54e-32 127
Msa0622280 MtrunA17_Chr7g0234731 35.849 212 116 6 113 322 121 314 1.41e-31 124
Msa0622280 MtrunA17_Chr5g0437821 41.667 132 76 1 356 486 4 135 1.28e-30 116
Msa0622280 MtrunA17_Chr4g0025841 30.204 245 154 4 243 487 37 264 1.04e-25 106
Msa0622280 MtrunA17_Chr6g0459781 35.052 194 112 4 230 413 2 191 1.05e-25 105
Msa0622280 MtrunA17_Chr2g0314691 30.151 199 120 4 347 542 19 201 4.76e-23 97.4
Msa0622280 MtrunA17_Chr7g0265161 27.386 241 138 5 308 543 5 213 2.74e-22 95.9
Msa0622280 MtrunA17_Chr5g0440901 31.373 153 95 2 335 487 1 143 1.56e-20 88.2
Msa0622280 MtrunA17_Chr5g0440891 34.731 167 100 3 237 402 42 200 7.90e-20 88.2
Msa0622280 MtrunA17_Chr4g0073911 32.386 176 107 5 259 426 24 195 3.19e-19 87.4
Msa0622280 MtrunA17_Chr6g0459791 41.732 127 59 5 418 542 3 116 8.52e-19 82.4
Msa0622280 MtrunA17_Chr7g0269361 30.636 173 118 1 26 198 18 188 2.41e-17 80.5
Msa0622280 MtrunA17_Chr6g0460141 33.571 140 85 5 271 402 5 144 1.97e-14 70.9
Msa0622280 MtrunA17_Chr4g0018281 27.950 161 104 3 43 197 38 192 2.46e-13 68.9
Msa0622280 MtrunA17_Chr4g0018251 26.708 161 106 3 43 197 38 192 7.08e-12 64.7
Msa0622280 MtrunA17_Chr4g0067891 23.936 188 132 3 18 194 11 198 1.37e-11 64.3
Msa0622280 MtrunA17_Chr4g0018241 26.708 161 106 3 43 197 38 192 2.60e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0622280 AT4G02320.1 55.578 502 193 5 66 553 33 518 0.0 564
Msa0622280 AT4G02300.1 55.172 493 201 3 67 551 50 530 0.0 546
Msa0622280 AT1G53830.1 50.735 544 242 9 30 553 50 587 9.50e-178 514
Msa0622280 AT3G14310.1 47.349 547 258 8 33 553 50 592 9.98e-167 486
Msa0622280 AT5G53370.1 44.912 570 267 10 14 554 35 586 3.42e-162 474
Msa0622280 AT5G53370.2 44.912 570 267 10 14 554 71 622 1.34e-161 474
Msa0622280 AT3G49220.1 46.565 524 250 8 45 554 90 597 7.22e-160 469
Msa0622280 AT2G45220.1 53.813 459 168 11 99 549 85 507 2.98e-159 464
Msa0622280 AT3G49220.3 46.565 524 250 8 45 554 135 642 3.36e-159 469
Msa0622280 AT3G43270.1 51.116 448 213 4 110 553 80 525 4.39e-158 462
Msa0622280 AT1G11580.1 45.703 512 253 6 46 549 59 553 2.91e-156 458
Msa0622280 AT1G11580.2 45.489 521 258 7 37 549 72 574 8.18e-156 458
Msa0622280 AT4G33220.1 45.898 512 254 7 54 549 15 519 6.38e-154 451
Msa0622280 AT1G02810.1 45.423 579 263 13 16 549 3 573 9.63e-154 452
Msa0622280 AT4G02330.1 44.737 570 273 9 22 553 6 571 3.85e-152 448
Msa0622280 AT3G10720.2 43.119 545 263 10 45 553 82 615 1.15e-145 433
Msa0622280 AT5G04970.1 43.911 542 263 12 45 553 87 620 1.63e-144 431
Msa0622280 AT4G33220.2 50.995 402 179 4 162 549 1 398 4.91e-144 421
Msa0622280 AT2G26440.1 43.822 518 276 8 39 549 34 543 6.99e-144 426
Msa0622280 AT3G05620.1 42.246 561 274 10 18 554 8 542 8.28e-143 423
Msa0622280 AT1G23200.1 43.646 543 239 12 44 548 36 549 4.18e-140 417
Msa0622280 AT2G47550.1 50.217 460 205 8 110 549 99 554 2.37e-139 415
Msa0622280 AT5G51490.1 44.015 518 253 9 46 549 38 532 1.61e-138 412
Msa0622280 AT3G60730.1 45.415 458 222 6 110 549 68 515 1.70e-138 411
Msa0622280 AT5G51500.1 46.526 475 227 9 84 553 88 540 2.62e-132 396
Msa0622280 AT5G49180.1 40.727 523 296 7 37 550 50 567 9.10e-132 396
Msa0622280 AT3G59010.1 47.186 462 213 9 95 549 87 524 1.34e-131 394
Msa0622280 AT3G05610.1 39.925 531 288 10 32 549 49 561 1.03e-130 397
Msa0622280 AT5G27870.1 40.232 517 291 6 43 553 58 562 3.69e-130 397
Msa0622280 AT4G33230.1 41.839 533 270 11 41 553 94 606 2.19e-129 391
Msa0622280 AT2G26450.1 41.221 524 277 10 41 553 108 611 1.47e-128 389
Msa0622280 AT2G43050.1 46.050 443 207 7 111 549 98 512 1.56e-128 386
Msa0622280 AT3G47400.1 46.966 445 223 7 110 549 154 590 1.73e-128 388
Msa0622280 AT3G10710.1 41.373 510 273 7 43 549 71 557 1.00e-127 385
Msa0622280 AT5G04960.1 40.698 516 281 6 43 553 69 564 2.03e-125 379
Msa0622280 AT1G53840.1 39.360 531 285 11 37 547 68 581 7.31e-125 379
Msa0622280 AT3G10720.1 62.692 260 96 1 294 553 1 259 3.85e-124 365
Msa0622280 AT3G14300.1 41.109 523 273 13 37 542 454 958 2.18e-119 375
Msa0622280 AT4G00190.1 40.117 511 259 12 46 553 8 474 4.80e-118 357
Msa0622280 AT3G06830.1 38.506 522 297 10 43 549 52 564 7.14e-118 360
Msa0622280 AT4G03930.1 40.667 450 246 7 107 549 85 520 4.75e-108 333
Msa0622280 AT5G20860.2 37.951 527 287 12 39 549 32 534 8.84e-108 333
Msa0622280 AT4G15980.1 48.949 333 166 3 220 549 367 698 6.83e-104 328
Msa0622280 AT4G15980.2 48.949 333 166 3 220 549 377 708 2.10e-103 327
Msa0622280 AT1G11590.1 42.195 410 221 5 143 549 124 520 3.32e-103 321
Msa0622280 AT3G27980.1 42.040 402 219 5 148 549 106 493 4.33e-103 320
Msa0622280 AT5G09760.1 36.692 526 301 13 35 543 38 548 2.44e-98 309
Msa0622280 AT5G09760.2 36.692 526 301 13 35 543 64 574 3.87e-98 309
Msa0622280 AT5G64640.1 35.206 534 285 14 45 545 96 601 4.31e-93 297
Msa0622280 AT5G20860.1 34.942 518 269 11 39 540 32 497 3.27e-89 284
Msa0622280 AT1G11370.1 51.527 262 121 1 222 483 31 286 5.95e-89 276
Msa0622280 AT3G62170.1 34.296 554 315 11 39 553 45 588 1.06e-84 275
Msa0622280 AT2G47030.1 32.215 596 353 11 1 553 1 588 2.91e-84 273
Msa0622280 AT2G47040.1 33.443 607 338 15 1 553 1 595 2.53e-83 271
Msa0622280 AT1G05310.1 35.015 337 189 6 216 542 72 388 4.68e-55 191
Msa0622280 AT2G36710.1 35.000 320 187 6 237 547 83 390 2.81e-54 189
Msa0622280 AT5G19730.1 34.985 343 191 9 217 542 54 381 9.90e-54 187
Msa0622280 AT3G29090.1 35.350 314 170 10 245 542 9 305 7.71e-51 177
Msa0622280 AT2G36700.1 33.770 305 184 4 243 542 42 333 1.90e-49 174
Msa0622280 AT3G17060.1 31.098 328 192 7 234 542 24 336 6.16e-49 173
Msa0622280 AT5G18990.1 35.593 295 166 5 232 515 18 299 8.62e-49 172
Msa0622280 AT2G21610.1 34.323 303 175 9 243 542 51 332 2.73e-47 169
Msa0622280 AT2G21610.2 34.323 303 175 9 243 542 56 337 3.48e-47 169
Msa0622280 AT3G24130.1 35.211 284 160 5 243 515 34 304 8.00e-46 164
Msa0622280 AT5G55590.1 35.256 312 175 8 243 542 82 378 1.41e-45 165
Msa0622280 AT5G07430.1 30.769 351 214 10 204 542 22 355 4.36e-42 155
Msa0622280 AT3G49220.2 33.333 294 166 8 45 324 135 412 2.75e-40 151
Msa0622280 AT5G55590.2 35.547 256 141 6 243 486 82 325 2.96e-40 149
Msa0622280 AT1G44980.1 38.750 240 136 3 170 406 10 241 5.85e-40 145
Msa0622280 AT5G07420.1 30.671 313 196 7 235 542 59 355 7.43e-39 146
Msa0622280 AT1G69940.1 30.537 298 185 8 251 542 74 355 4.79e-38 144
Msa0622280 AT5G07410.1 30.537 298 185 8 251 542 74 355 1.78e-37 142
Msa0622280 AT5G47500.1 27.327 333 204 7 223 543 52 358 2.00e-36 139
Msa0622280 AT5G61680.1 31.023 303 189 6 245 542 71 358 3.14e-36 139
Msa0622280 AT2G19150.1 31.447 318 188 7 243 549 41 339 8.67e-36 137
Msa0622280 AT2G47280.1 31.173 324 188 11 234 543 26 328 1.67e-32 128
Msa0622280 AT5G26810.1 26.347 334 220 8 229 550 20 339 5.83e-31 123
Msa0622280 AT2G19150.2 32.016 253 149 5 243 486 41 279 1.70e-29 118
Msa0622280 AT4G25250.1 30.000 190 122 7 14 194 6 193 1.97e-15 75.5
Msa0622280 AT5G62360.1 29.268 164 105 3 43 201 45 202 2.45e-12 66.6
Msa0622280 AT5G51520.1 27.604 192 124 6 17 194 9 199 2.72e-12 66.6

Find 156 sgRNAs with CRISPR-Local

Find 335 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAGTAGCTTCCTATCTTTC+GGG 0.181837 4_2:+74650934 None:intergenic
ATATGATAAATTGTATTTAT+AGG 0.196924 4_2:-74646345 Msa0622280:three_prime_UTR
AATCTTCAGTCTTATTTATA+TGG 0.200774 4_2:-74646421 Msa0622280:three_prime_UTR
TCTTTCACTTTACCATATTC+AGG 0.200801 4_2:+74650978 None:intergenic
TACCGCGAATGTGATGTTTA+TGG 0.201693 4_2:-74647282 Msa0622280:CDS
TACCTAGTTGCGCTAGAATT+TGG 0.221120 4_2:+74650819 None:intergenic
CACAATCCTCAAGGGCTCTT+TGG 0.254373 4_2:+74651288 None:intergenic
TGTAGTAGCTTCCTATCTTT+CGG 0.258132 4_2:+74650933 None:intergenic
ACAATTCAAGATTGAAATTC+CGG 0.284922 4_2:+74647131 None:intergenic
ATCAACTACCATATTTATAT+TGG 0.303942 4_2:-74651714 Msa0622280:five_prime_UTR
ACTTTCCAATCATCTACTTT+TGG 0.313523 4_2:-74650289 Msa0622280:intron
TCTGAAACTTTCCCTGAATA+TGG 0.313917 4_2:-74650990 Msa0622280:CDS
ATCTCCAACTAACATCAAAT+TGG 0.314325 4_2:+74650366 None:intergenic
AGATTGAAATTCCGGTGTTT+TGG 0.332878 4_2:+74647139 None:intergenic
GGAACTGTAGACTTCATCTT+TGG 0.342099 4_2:-74647261 Msa0622280:CDS
AAAACCAATTTGATGTTAGT+TGG 0.349295 4_2:-74650370 Msa0622280:CDS
ATTTGTTTGAACTCTCTATA+TGG 0.350807 4_2:+74651833 None:intergenic
GCTTTGGATACATTGTTCTA+TGG 0.359797 4_2:-74646952 Msa0622280:CDS
GTTCTCAAAGGTTATACCTT+TGG 0.362612 4_2:+74647428 None:intergenic
ACTAAAATTGTGGAGAGAAT+TGG 0.366205 4_2:+74651572 None:intergenic
GTGCATATAGGTTGCAGTTT+TGG 0.366257 4_2:+74647220 None:intergenic
GCCAGCAGAAATGTTGTAGA+TGG 0.376204 4_2:-74650319 Msa0622280:CDS
AATGAATGGTTGAGCTCTAC+TGG 0.377444 4_2:-74646808 Msa0622280:CDS
GTGTTCCTTCGCATGCTGAT+TGG 0.381606 4_2:+74651483 None:intergenic
ATTTATATGGAGGATTTGAT+AGG 0.389886 4_2:-74646408 Msa0622280:three_prime_UTR
CTCTATGAATTTAGTACATA+AGG 0.392062 4_2:+74646702 None:intergenic
ACATAAAATAAATGAGAGTT+GGG 0.393557 4_2:+74646502 None:intergenic
ACTTACCAAAAGTAGATGAT+TGG 0.393790 4_2:+74650284 None:intergenic
TGTTCCTTCGCATGCTGATT+GGG 0.403041 4_2:+74651484 None:intergenic
ATGGAATGGAACGTTTGCTT+TGG 0.405279 4_2:-74646968 Msa0622280:CDS
CAGATTTGTGATACACATAA+AGG 0.408417 4_2:-74650431 Msa0622280:CDS
CTTCTACCAATGTAGCTTTG+TGG 0.408896 4_2:-74647346 Msa0622280:CDS
ACTAAATTCATAGAGTTTAA+CGG 0.409472 4_2:-74646694 Msa0622280:three_prime_UTR
GGTGATTGCCAATATAAATA+TGG 0.409717 4_2:+74651706 None:intergenic
GATCGGGTTTGCGTGCATAT+AGG 0.411663 4_2:+74647208 None:intergenic
ACTTGTAAATTTCGCACATA+AGG 0.413327 4_2:+74646737 None:intergenic
CGCTTGATGTTTGCTAGGTC+CGG 0.416833 4_2:+74647401 None:intergenic
AGTTTGAGAGAGATCAGAAA+TGG 0.418630 4_2:+74651226 None:intergenic
CATGGGTGTCCCCGAAAGAT+AGG 0.420538 4_2:-74650944 Msa0622280:CDS
TACATAAAATAAATGAGAGT+TGG 0.423760 4_2:+74646501 None:intergenic
GCCATGTTGAAGAAAGTTCC+TGG 0.423964 4_2:-74651035 Msa0622280:CDS
GAGAATAATTGTAGTTGTGC+TGG 0.440554 4_2:+74651640 None:intergenic
GACCAATGTGTACACATGTT+TGG 0.445484 4_2:-74651144 Msa0622280:CDS
AGAGTTACCTCGGTCGTCCT+TGG 0.448194 4_2:-74647062 Msa0622280:CDS
AAGTCGAAGTCCGGTGCAAT+TGG 0.449411 4_2:+74651340 None:intergenic
CTTTCACTTTACCATATTCA+GGG 0.450923 4_2:+74650979 None:intergenic
TATGGAGGATTTGATAGGCT+TGG 0.451928 4_2:-74646403 Msa0622280:three_prime_UTR
GACTGTCAAACTCTACTTAG+TGG 0.454122 4_2:-74651173 Msa0622280:CDS
GCAATATTATGAACTCTCAT+TGG 0.455689 4_2:+74646629 None:intergenic
ATGCTGATTGGGCTACTGTT+TGG 0.456849 4_2:+74651495 None:intergenic
CACAAAGCTACATTGGTAGA+AGG 0.457431 4_2:+74647347 None:intergenic
ATAGGCTTGGCAACGATTGT+CGG 0.459543 4_2:-74646390 Msa0622280:three_prime_UTR
AGCAACCACAAGATCAAACT+TGG 0.461853 4_2:+74650893 None:intergenic
AAGGTTGAGACACAAAGGTC+TGG 0.465297 4_2:+74651455 None:intergenic
ATGTAGCTTTGTGGCTTACC+AGG 0.466786 4_2:-74647337 Msa0622280:CDS
CTCTTGAACGTTGATTGTAC+TGG 0.467559 4_2:+74647081 None:intergenic
ACACCTTTCAACTCAAATCA+AGG 0.468433 4_2:+74646773 None:intergenic
CAAGCGGTAGCGGTGAGAAA+TGG 0.469647 4_2:-74647384 Msa0622280:CDS
AAGATCTGGGAAAGTGGATA+AGG 0.473621 4_2:+74651436 None:intergenic
TGAAAGATGGGTTTCCATCA+TGG 0.476648 4_2:-74650962 Msa0622280:CDS
AAGAATTTGTTCACTGCACA+AGG 0.478688 4_2:-74647177 Msa0622280:CDS
AATTTGATGTTAGTTGGAGA+TGG 0.480444 4_2:-74650364 Msa0622280:CDS
AGGACAGAGCAAATCATTTG+TGG 0.480835 4_2:+74651398 None:intergenic
GGACAGAGCAAATCATTTGT+GGG 0.481086 4_2:+74651399 None:intergenic
TGCACCGGACTTCGACTTCG+CGG 0.482626 4_2:-74651335 Msa0622280:CDS
ATCCAGCAGGATGGTTAGAA+TGG 0.483621 4_2:-74646987 Msa0622280:CDS
GATCTTGTGGTTGCTAAAGA+TGG 0.486358 4_2:-74650885 Msa0622280:CDS
AATTATAGTGTGTTTGAGAG+TGG 0.486644 4_2:+74651683 None:intergenic
TGAGGTAAGATCTGGGAAAG+TGG 0.486681 4_2:+74651430 None:intergenic
GAATATGGTAAAGTGAAAGA+TGG 0.489119 4_2:-74650975 Msa0622280:CDS
ACAGGCAACTTTACCACTAT+AGG 0.490528 4_2:-74650861 Msa0622280:CDS
TTTCCTTGATTTGAGTTGAA+AGG 0.493049 4_2:-74646776 Msa0622280:exon
ATAACCTGGCCACGTAACTC+TGG 0.494148 4_2:+74646891 None:intergenic
GATAATTTGATTGATCCAGC+AGG 0.499966 4_2:-74647000 Msa0622280:CDS
AGCAATTGCTTCTCCTATAG+TGG 0.501131 4_2:+74650848 None:intergenic
ATTCTCTCCTTTACCATGAG+AGG 0.501133 4_2:-74651623 Msa0622280:exon
TTCCATTCTAACCATCCTGC+TGG 0.501249 4_2:+74646985 None:intergenic
CACATTCGCGGTAGAATTGA+CGG 0.504026 4_2:+74647292 None:intergenic
TTCTCTCCTTTACCATGAGA+GGG 0.505750 4_2:-74651622 Msa0622280:exon
ATTTGATGTTAGTTGGAGAT+GGG 0.508898 4_2:-74650363 Msa0622280:CDS
ATGTTAGTTGGAGATGGGAT+TGG 0.509060 4_2:-74650358 Msa0622280:CDS
ATTTGAGTTGAAAGGTGTAA+TGG 0.509601 4_2:-74646768 Msa0622280:exon
AAAATGTTGGATATACTCAT+TGG 0.511540 4_2:-74646564 Msa0622280:three_prime_UTR
AATTTATACAAGGAAATGAA+TGG 0.514507 4_2:-74646822 Msa0622280:CDS
TCAAACCAAGTTTGATCTTG+TGG 0.515791 4_2:-74650898 Msa0622280:CDS
ATAAATTAACACAATCCTCA+AGG 0.516148 4_2:+74651279 None:intergenic
CCTAAACAACACCATAAAAG+AGG 0.516848 4_2:-74651378 Msa0622280:CDS
CCCATCTACAACATTTCTGC+TGG 0.519474 4_2:+74650318 None:intergenic
TTATGTATTGTTGAAATGGA+TGG 0.520768 4_2:-74646485 Msa0622280:three_prime_UTR
TATGTATTGTTGAAATGGAT+GGG 0.529259 4_2:-74646484 Msa0622280:three_prime_UTR
CTTCAGTCTTATTTATATGG+AGG 0.529416 4_2:-74646418 Msa0622280:three_prime_UTR
AATGTGTACACATGTTTGGA+TGG 0.529704 4_2:-74651140 Msa0622280:CDS
GAGTATAAGAATAGAGGTCC+TGG 0.529819 4_2:-74646928 Msa0622280:CDS
TTTGTGATACACATAAAGGC+TGG 0.530863 4_2:-74650427 Msa0622280:CDS
GTTTGAACTCTCTATATGGA+AGG 0.530971 4_2:+74651837 None:intergenic
ATTATAGTGTGTTTGAGAGT+GGG 0.538134 4_2:+74651684 None:intergenic
TTCCATAAACATCACATTCG+CGG 0.538310 4_2:+74647280 None:intergenic
TCGACCGCGAAGTCGAAGTC+CGG 0.539588 4_2:+74651331 None:intergenic
GAAAGATGGGTTTCCATCAT+GGG 0.541400 4_2:-74650961 Msa0622280:CDS
CTCCAAATTCTAGCGCAACT+AGG 0.542551 4_2:-74650821 Msa0622280:intron
TTGTGATACACATAAAGGCT+GGG 0.546086 4_2:-74650426 Msa0622280:CDS
GCTACCGCTTGATGTTTGCT+AGG 0.546145 4_2:+74647396 None:intergenic
AGGTTGAGACACAAAGGTCT+GGG 0.550274 4_2:+74651456 None:intergenic
AATATGGTAAAGTGAAAGAT+GGG 0.551007 4_2:-74650974 Msa0622280:CDS
AACAGTGAACTGACTTGCCT+CGG 0.552572 4_2:+74646849 None:intergenic
TTGTAAAATTGCAGCTGCCG+CGG 0.554976 4_2:-74647112 Msa0622280:CDS
GAAGCTTTAGTCTTCACTCC+AGG 0.555587 4_2:+74651017 None:intergenic
TTGGTAGAAGGCTGAGAAGT+CGG 0.555627 4_2:+74647359 None:intergenic
CTGGCACTTGTATTCGAACC+AGG 0.557623 4_2:+74646910 None:intergenic
GGTAGAATTGACGGAGGGAG+TGG 0.563274 4_2:+74647301 None:intergenic
ACTGTTAGACAATTTATACA+AGG 0.563307 4_2:-74646832 Msa0622280:CDS
AGTGCCAGAGTTACGTGGCC+AGG 0.568322 4_2:-74646895 Msa0622280:CDS
GCAGGATGGTTAGAATGGAA+TGG 0.569015 4_2:-74646982 Msa0622280:CDS
TAGCAAACATCAAGCGGTAG+CGG 0.569213 4_2:-74647394 Msa0622280:CDS
AAAAGTAGATGATTGGAAAG+TGG 0.570646 4_2:+74650291 None:intergenic
CATCTTTGGCAATGCAGCGG+TGG 0.575842 4_2:-74647247 Msa0622280:CDS
GGTAAGCCACAAAGCTACAT+TGG 0.578392 4_2:+74647340 None:intergenic
TCCAGGAACTTTCTTCAACA+TGG 0.582962 4_2:+74651034 None:intergenic
TCTTTCGGGGACACCCATGA+TGG 0.585799 4_2:+74650948 None:intergenic
TGTGATACACATAAAGGCTG+GGG 0.589170 4_2:-74650425 Msa0622280:CDS
ATAACCTTTGAGAACTCAGC+CGG 0.591636 4_2:-74647420 Msa0622280:CDS
TGGATATACTCATTGGAAGT+CGG 0.593100 4_2:-74646557 Msa0622280:three_prime_UTR
CAATCATCTTCCAATTGCAC+CGG 0.594371 4_2:-74651350 Msa0622280:CDS
TATGGTGAGTATAAGAATAG+AGG 0.595570 4_2:-74646934 Msa0622280:CDS
GTGGTTGCTAAAGATGGCAC+AGG 0.596430 4_2:-74650879 Msa0622280:CDS
AAATATTAGAACTAAAATTG+TGG 0.600237 4_2:+74651562 None:intergenic
TAGTAGCTTCCTATCTTTCG+GGG 0.601425 4_2:+74650935 None:intergenic
CCAGCAGAAATGTTGTAGAT+GGG 0.603077 4_2:-74650318 Msa0622280:CDS
TAAATTAACACAATCCTCAA+GGG 0.603853 4_2:+74651280 None:intergenic
GGAGACAAATTCATAGCCAA+AGG 0.605203 4_2:-74647444 Msa0622280:CDS
GCAGAAATGTTGTAGATGGG+TGG 0.611210 4_2:-74650315 Msa0622280:CDS
TTATAGTGTGTTTGAGAGTG+GGG 0.611386 4_2:+74651685 None:intergenic
ACTTGACCAAAGAGCCCTTG+AGG 0.618624 4_2:-74651294 Msa0622280:CDS
ACTAGAAATATCATTCAACT+TGG 0.619819 4_2:+74651076 None:intergenic
TTTGTAATGACTTTATAACC+TGG 0.621460 4_2:+74646877 None:intergenic
AGTGGACATAGAGAGTGTCC+TGG 0.625727 4_2:+74647319 None:intergenic
TGGATAAGGTTGAGACACAA+AGG 0.626369 4_2:+74651450 None:intergenic
ATTTGATTGATCCAGCAGGA+TGG 0.631665 4_2:-74646996 Msa0622280:CDS
CTTACTGCTAGAAGCTACTG+TGG 0.644189 4_2:+74651199 None:intergenic
CTTCATCTTTGGCAATGCAG+CGG 0.646252 4_2:-74647250 Msa0622280:CDS
CGGACCTAGCAAACATCAAG+CGG 0.654497 4_2:-74647400 Msa0622280:CDS
ATTGGCATGAGAGCAAGCAA+TGG 0.659872 4_2:+74651590 None:intergenic
ATCCAAACATGTGTACACAT+TGG 0.661634 4_2:+74651142 None:intergenic
AGGTCCGGCTGAGTTCTCAA+AGG 0.661652 4_2:+74647416 None:intergenic
GTAGCCCAATCAGCATGCGA+AGG 0.662933 4_2:-74651488 Msa0622280:CDS
GAAGATCCTAACCAAAACAC+CGG 0.670235 4_2:-74647150 Msa0622280:CDS
CATAAAATAAATGAGAGTTG+GGG 0.670290 4_2:+74646503 None:intergenic
TCAACGTTCAAGAGTTACCT+CGG 0.677560 4_2:-74647072 Msa0622280:CDS
GGTTATAAAGCAGATTTACG+TGG 0.688032 4_2:+74646607 None:intergenic
TTCGCGGTAGAATTGACGGA+GGG 0.690665 4_2:+74647296 None:intergenic
GATTGGACAGACTGTTGTGA+AGG 0.692383 4_2:-74650341 Msa0622280:CDS
TGGGGCTTACTTTGAAAACG+TGG 0.696123 4_2:-74650407 Msa0622280:CDS
ATACAAGTGCCAGAGTTACG+TGG 0.697478 4_2:-74646900 Msa0622280:CDS
AGTCATTACAAACACTACCG+AGG 0.710837 4_2:-74646866 Msa0622280:CDS
TTGTACTGGAATCAAATCCG+CGG 0.716710 4_2:+74647095 None:intergenic
ATTCGCGGTAGAATTGACGG+AGG 0.742607 4_2:+74647295 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAATTATTTTATCTTTTTTA+AGG + chr4_2:74648063-74648082 None:intergenic 10.0%
!! AAAAAGATAAAATAATTGAA+TGG - chr4_2:74648065-74648084 Msa0622280:intron 10.0%
!! ATTTCAAATCAAAATTATTT+CGG - chr4_2:74648179-74648198 Msa0622280:intron 10.0%
!! ATTCATTAATAAATAGAAAA+CGG + chr4_2:74649783-74649802 None:intergenic 10.0%
!! CAAAAAAAATGTTTATATAA+AGG - chr4_2:74650045-74650064 Msa0622280:intron 10.0%
!! ATATGATAAATTGTATTTAT+AGG - chr4_2:74651855-74651874 Msa0622280:five_prime_UTR 10.0%
!! AAATATTAGAACTAAAATTG+TGG + chr4_2:74646641-74646660 None:intergenic 15.0%
!! AAAATTGAGAAAAAAAATTG+AGG - chr4_2:74647101-74647120 Msa0622280:CDS 15.0%
!! GATCTATATTCATAATTTAT+AGG + chr4_2:74647418-74647437 None:intergenic 15.0%
!! TCTATATTCATAATTTATGT+CGG - chr4_2:74647553-74647572 Msa0622280:intron 15.0%
!!! TATTAAAGTGTCAATAAAAT+AGG + chr4_2:74649134-74649153 None:intergenic 15.0%
!!! AAAATTTTAAAATCTATTGG+TGG - chr4_2:74649257-74649276 Msa0622280:intron 15.0%
!!! GAAAAGTAAGTAATTTTATA+TGG - chr4_2:74649395-74649414 Msa0622280:intron 15.0%
!!! TATACTTTAAGCAAATATTT+TGG - chr4_2:74649808-74649827 Msa0622280:intron 15.0%
!!! TTTTTTACACAATTGAATAT+TGG - chr4_2:74650715-74650734 Msa0622280:intron 15.0%
!!! AACCAGAATTTTAAAAATAA+CGG - chr4_2:74651612-74651631 Msa0622280:exon 15.0%
!!! TATTTTATGTATTGTTGAAA+TGG - chr4_2:74651711-74651730 Msa0622280:five_prime_UTR 15.0%
!! ATCAACTACCATATTTATAT+TGG - chr4_2:74646486-74646505 Msa0622280:three_prime_UTR 20.0%
!! CTATATTCATAATTTATGTC+GGG - chr4_2:74647554-74647573 Msa0622280:intron 20.0%
!! AATCAATAACACACTATTTA+AGG + chr4_2:74647748-74647767 None:intergenic 20.0%
!! TAAAATAATTGAATGGCATA+TGG - chr4_2:74648072-74648091 Msa0622280:intron 20.0%
!! AAATTGTGTTCAAGTAATAT+TGG + chr4_2:74648163-74648182 None:intergenic 20.0%
!! ATCATCTATGTTATTATTGT+TGG - chr4_2:74648332-74648351 Msa0622280:intron 20.0%
!! AATGTAACATGATTCTAATT+GGG - chr4_2:74648694-74648713 Msa0622280:intron 20.0%
!! TTAAGTTCCTATATTTAGTT+GGG - chr4_2:74648727-74648746 Msa0622280:intron 20.0%
!!! AGAATATGCAAATTTTGTAT+AGG - chr4_2:74648843-74648862 Msa0622280:intron 20.0%
!! GTAACTGTATTTATTTAAGT+CGG - chr4_2:74649044-74649063 Msa0622280:intron 20.0%
!! TACTAATTAGAACTAACATT+CGG - chr4_2:74649102-74649121 Msa0622280:intron 20.0%
!! GTAATGAATAGAAGAAAATT+AGG + chr4_2:74649174-74649193 None:intergenic 20.0%
!! TTGTAAAAACGACAAAAATA+TGG - chr4_2:74649445-74649464 Msa0622280:intron 20.0%
!! TAGCCAAATTAAATCTTTAA+TGG - chr4_2:74649558-74649577 Msa0622280:intron 20.0%
!! ACACCATTAAAGATTTAATT+TGG + chr4_2:74649564-74649583 None:intergenic 20.0%
!! TAATAAATAGAAAACGGTAA+AGG + chr4_2:74649777-74649796 None:intergenic 20.0%
!! ATGCATTTGTTTATACTAAA+AGG - chr4_2:74649911-74649930 Msa0622280:intron 20.0%
!! TGCATTTGTTTATACTAAAA+GGG - chr4_2:74649912-74649931 Msa0622280:intron 20.0%
!! ACACATTTCATGTTTATATA+AGG - chr4_2:74650012-74650031 Msa0622280:intron 20.0%
!!! CCATTTTATACTTTACTAAA+CGG + chr4_2:74650480-74650499 None:intergenic 20.0%
!! AATTTATACAAGGAAATGAA+TGG - chr4_2:74651378-74651397 Msa0622280:CDS 20.0%
!! ACTAAATTCATAGAGTTTAA+CGG - chr4_2:74651506-74651525 Msa0622280:CDS 20.0%
!! ACATAAAATAAATGAGAGTT+GGG + chr4_2:74651701-74651720 None:intergenic 20.0%
!! TACATAAAATAAATGAGAGT+TGG + chr4_2:74651702-74651721 None:intergenic 20.0%
!!! AATCTTCAGTCTTATTTATA+TGG - chr4_2:74651779-74651798 Msa0622280:five_prime_UTR 20.0%
! ATTTGTTTGAACTCTCTATA+TGG + chr4_2:74646370-74646389 None:intergenic 25.0%
!!! TGTTGCTAATTTTGAGAAAT+TGG + chr4_2:74646671-74646690 None:intergenic 25.0%
!! TGATTGTTTAACCTCTTTTA+TGG + chr4_2:74646836-74646855 None:intergenic 25.0%
! TAAATTAACACAATCCTCAA+GGG + chr4_2:74646923-74646942 None:intergenic 25.0%
! ATAAATTAACACAATCCTCA+AGG + chr4_2:74646924-74646943 None:intergenic 25.0%
! ACTAGAAATATCATTCAACT+TGG + chr4_2:74647127-74647146 None:intergenic 25.0%
! AATATGGTAAAGTGAAAGAT+GGG - chr4_2:74647226-74647245 Msa0622280:CDS 25.0%
! CATAATTTATAGGTATGTAG+TGG + chr4_2:74647408-74647427 None:intergenic 25.0%
! GTTTATCTCTCTAATTCTAA+TGG - chr4_2:74647497-74647516 Msa0622280:intron 25.0%
! AAAACCAATTTGATGTTAGT+TGG - chr4_2:74647830-74647849 Msa0622280:intron 25.0%
! TACATTCTACAATTAATACG+AGG + chr4_2:74647975-74647994 None:intergenic 25.0%
! CAATGTAACATGATTCTAAT+TGG - chr4_2:74648693-74648712 Msa0622280:intron 25.0%
! GATTCTAATTGGGAAAATTA+TGG - chr4_2:74648704-74648723 Msa0622280:intron 25.0%
! GTTAAGTTCCTATATTTAGT+TGG - chr4_2:74648726-74648745 Msa0622280:intron 25.0%
! TAAGTTCCTATATTTAGTTG+GGG - chr4_2:74648728-74648747 Msa0622280:intron 25.0%
!! CAAATTTTGTATAGGAGAAA+GGG - chr4_2:74648851-74648870 Msa0622280:intron 25.0%
! AAATATTTCAACACGCATTT+AGG - chr4_2:74649020-74649039 Msa0622280:intron 25.0%
!! GACACTTTAATATTTTCAGT+AGG - chr4_2:74649142-74649161 Msa0622280:intron 25.0%
! CAAATTGAGATTTGGATTTA+TGG + chr4_2:74649322-74649341 None:intergenic 25.0%
! TACATATGCAAATTGAGATT+TGG + chr4_2:74649330-74649349 None:intergenic 25.0%
!!! ACTTACTTTTCTTGCTTAAT+TGG + chr4_2:74649386-74649405 None:intergenic 25.0%
!! ACAATGTTCTTTTCTTTAGT+TGG + chr4_2:74649429-74649448 None:intergenic 25.0%
! TTGACTAAAATTATTGCTGT+TGG + chr4_2:74649498-74649517 None:intergenic 25.0%
! TAAATCTTTAATGGTGTGTT+TGG - chr4_2:74649567-74649586 Msa0622280:intron 25.0%
! GAGATGATTATTTAGTTGTT+TGG + chr4_2:74650138-74650157 None:intergenic 25.0%
!!! ATTTTCCGATCTTTAAAGTA+TGG - chr4_2:74650429-74650448 Msa0622280:CDS 25.0%
!!! TTTTCCGATCTTTAAAGTAT+GGG - chr4_2:74650430-74650449 Msa0622280:CDS 25.0%
!! AAATCCCATACTTTAAAGAT+CGG + chr4_2:74650437-74650456 None:intergenic 25.0%
! CCGTTTAGTAAAGTATAAAA+TGG - chr4_2:74650477-74650496 Msa0622280:intron 25.0%
! TTTACACAATTGAATATTGG+TGG - chr4_2:74650718-74650737 Msa0622280:intron 25.0%
! ACAATTCAAGATTGAAATTC+CGG + chr4_2:74651072-74651091 None:intergenic 25.0%
!!! GTTCTTGAATATTTTTTCCA+AGG + chr4_2:74651158-74651177 None:intergenic 25.0%
! TTTGTAATGACTTTATAACC+TGG + chr4_2:74651326-74651345 None:intergenic 25.0%
! ACTGTTAGACAATTTATACA+AGG - chr4_2:74651368-74651387 Msa0622280:CDS 25.0%
! CTCTATGAATTTAGTACATA+AGG + chr4_2:74651501-74651520 None:intergenic 25.0%
!!! TGCCGTTATTTTTAAAATTC+TGG + chr4_2:74651617-74651636 None:intergenic 25.0%
! TAAAAATAACGGCAAAATGT+TGG - chr4_2:74651623-74651642 Msa0622280:exon 25.0%
! AAAATGTTGGATATACTCAT+TGG - chr4_2:74651636-74651655 Msa0622280:five_prime_UTR 25.0%
!! GTAAAACTATTTTACACTGA+AGG - chr4_2:74651667-74651686 Msa0622280:five_prime_UTR 25.0%
! CATAAAATAAATGAGAGTTG+GGG + chr4_2:74651700-74651719 None:intergenic 25.0%
! TTATGTATTGTTGAAATGGA+TGG - chr4_2:74651715-74651734 Msa0622280:five_prime_UTR 25.0%
! TATGTATTGTTGAAATGGAT+GGG - chr4_2:74651716-74651735 Msa0622280:five_prime_UTR 25.0%
! ATTTATATGGAGGATTTGAT+AGG - chr4_2:74651792-74651811 Msa0622280:five_prime_UTR 25.0%
GGTGATTGCCAATATAAATA+TGG + chr4_2:74646497-74646516 None:intergenic 30.0%
ATTATAGTGTGTTTGAGAGT+GGG + chr4_2:74646519-74646538 None:intergenic 30.0%
AATTATAGTGTGTTTGAGAG+TGG + chr4_2:74646520-74646539 None:intergenic 30.0%
ACTAAAATTGTGGAGAGAAT+TGG + chr4_2:74646631-74646650 None:intergenic 30.0%
CTTTCACTTTACCATATTCA+GGG + chr4_2:74647224-74647243 None:intergenic 30.0%
TCTTTCACTTTACCATATTC+AGG + chr4_2:74647225-74647244 None:intergenic 30.0%
GAATATGGTAAAGTGAAAGA+TGG - chr4_2:74647225-74647244 Msa0622280:CDS 30.0%
ATATAGACCATCTCACAATA+TGG + chr4_2:74647540-74647559 None:intergenic 30.0%
TTCATTTCCACAATTGAACA+TGG - chr4_2:74647641-74647660 Msa0622280:intron 30.0%
! ACTATTTAAGGTCACATAGT+AGG + chr4_2:74647736-74647755 None:intergenic 30.0%
CAGATTTGTGATACACATAA+AGG - chr4_2:74647769-74647788 Msa0622280:intron 30.0%
ATCTCCAACTAACATCAAAT+TGG + chr4_2:74647837-74647856 None:intergenic 30.0%
AATTTGATGTTAGTTGGAGA+TGG - chr4_2:74647836-74647855 Msa0622280:intron 30.0%
ATTTGATGTTAGTTGGAGAT+GGG - chr4_2:74647837-74647856 Msa0622280:intron 30.0%
AAAAGTAGATGATTGGAAAG+TGG + chr4_2:74647912-74647931 None:intergenic 30.0%
! ACTTTCCAATCATCTACTTT+TGG - chr4_2:74647911-74647930 Msa0622280:intron 30.0%
ACTTACCAAAAGTAGATGAT+TGG + chr4_2:74647919-74647938 None:intergenic 30.0%
CGAGGAAAATTAGTAGAAAA+AGG + chr4_2:74647957-74647976 None:intergenic 30.0%
ATACAGTTAAACAGAGTACA+AGG - chr4_2:74648098-74648117 Msa0622280:intron 30.0%
TACAGTTAAACAGAGTACAA+GGG - chr4_2:74648099-74648118 Msa0622280:intron 30.0%
ATGATTTGAGCTCAATTGTT+TGG + chr4_2:74648515-74648534 None:intergenic 30.0%
CTCAAACATATCGAAGAAAT+TGG - chr4_2:74648546-74648565 Msa0622280:intron 30.0%
! CGAAGAAATTGGTCAAATTT+TGG - chr4_2:74648557-74648576 Msa0622280:intron 30.0%
TGATAATCTAGAGATTATCC+AGG + chr4_2:74648589-74648608 None:intergenic 30.0%
TCATTTCCCCAACTAAATAT+AGG + chr4_2:74648737-74648756 None:intergenic 30.0%
! GCAAATTTTGTATAGGAGAA+AGG - chr4_2:74648850-74648869 Msa0622280:intron 30.0%
TCTACAATAGATCGAAATCA+CGG - chr4_2:74648895-74648914 Msa0622280:intron 30.0%
TCAATCATAGCCAATTAAGA+TGG + chr4_2:74649284-74649303 None:intergenic 30.0%
TGGATTTATGGATCATCTTT+CGG + chr4_2:74649310-74649329 None:intergenic 30.0%
! TGGATCTGATTGATAACAAA+GGG + chr4_2:74649366-74649385 None:intergenic 30.0%
! TTGGATCTGATTGATAACAA+AGG + chr4_2:74649367-74649386 None:intergenic 30.0%
AGTAAAATGGATCCAAACTA+TGG + chr4_2:74649655-74649674 None:intergenic 30.0%
GAATTGTTTCCACTCTATAT+TGG - chr4_2:74649714-74649733 Msa0622280:intron 30.0%
CAAAGAAAGTGAAAAGAAAG+TGG + chr4_2:74650112-74650131 None:intergenic 30.0%
GTATGAGGAAAGATTGTTAA+AGG + chr4_2:74650192-74650211 None:intergenic 30.0%
! AAATCACCTCTTTCTCTTTT+TGG + chr4_2:74650557-74650576 None:intergenic 30.0%
!! AAATTCTTTTGCTTTGGATC+GGG + chr4_2:74651011-74651030 None:intergenic 30.0%
!! CAAATTCTTTTGCTTTGGAT+CGG + chr4_2:74651012-74651031 None:intergenic 30.0%
! GTGAACAAATTCTTTTGCTT+TGG + chr4_2:74651017-74651036 None:intergenic 30.0%
TATGGTGAGTATAAGAATAG+AGG - chr4_2:74651266-74651285 Msa0622280:CDS 30.0%
CAACTCAAATCAAGGAAAAA+TGG + chr4_2:74651422-74651441 None:intergenic 30.0%
!! TTTCCTTGATTTGAGTTGAA+AGG - chr4_2:74651424-74651443 Msa0622280:CDS 30.0%
!! ATTTGAGTTGAAAGGTGTAA+TGG - chr4_2:74651432-74651451 Msa0622280:CDS 30.0%
ACTTGTAAATTTCGCACATA+AGG + chr4_2:74651466-74651485 None:intergenic 30.0%
GCAATATTATGAACTCTCAT+TGG + chr4_2:74651574-74651593 None:intergenic 30.0%
!! CTTCAGTCTTATTTATATGG+AGG - chr4_2:74651782-74651801 Msa0622280:five_prime_UTR 30.0%
GTTTGAACTCTCTATATGGA+AGG + chr4_2:74646366-74646385 None:intergenic 35.0%
TTATAGTGTGTTTGAGAGTG+GGG + chr4_2:74646518-74646537 None:intergenic 35.0%
GAGAATAATTGTAGTTGTGC+TGG + chr4_2:74646563-74646582 None:intergenic 35.0%
!!! CTGTTTTTGAGGTAAGATCT+GGG + chr4_2:74646780-74646799 None:intergenic 35.0%
!!! ACTGTTTTTGAGGTAAGATC+TGG + chr4_2:74646781-74646800 None:intergenic 35.0%
!!! CCTCTTTTATGGTGTTGTTT+AGG + chr4_2:74646825-74646844 None:intergenic 35.0%
CCTAAACAACACCATAAAAG+AGG - chr4_2:74646822-74646841 Msa0622280:CDS 35.0%
AGTTTGAGAGAGATCAGAAA+TGG + chr4_2:74646977-74646996 None:intergenic 35.0%
ATCCAAACATGTGTACACAT+TGG + chr4_2:74647061-74647080 None:intergenic 35.0%
AATGTGTACACATGTTTGGA+TGG - chr4_2:74647060-74647079 Msa0622280:CDS 35.0%
! TCTGAAACTTTCCCTGAATA+TGG - chr4_2:74647210-74647229 Msa0622280:CDS 35.0%
TGTAGTAGCTTCCTATCTTT+CGG + chr4_2:74647270-74647289 None:intergenic 35.0%
TCAAACCAAGTTTGATCTTG+TGG - chr4_2:74647302-74647321 Msa0622280:CDS 35.0%
! GATCATCTAGCTCACTAATA+TGG - chr4_2:74647434-74647453 Msa0622280:CDS 35.0%
CCTTATCTCTCTACATTGAA+TGG + chr4_2:74647478-74647497 None:intergenic 35.0%
CCATTCAATGTAGAGAGATA+AGG - chr4_2:74647475-74647494 Msa0622280:intron 35.0%
TACAACACCATATTGTGAGA+TGG - chr4_2:74647530-74647549 Msa0622280:intron 35.0%
TAATATGTCTCCAATCTCCA+TGG + chr4_2:74647668-74647687 None:intergenic 35.0%
TTTGTGATACACATAAAGGC+TGG - chr4_2:74647773-74647792 Msa0622280:intron 35.0%
TTGTGATACACATAAAGGCT+GGG - chr4_2:74647774-74647793 Msa0622280:intron 35.0%
!! TGATTTGCTTAGATGCATGT+GGG - chr4_2:74648474-74648493 Msa0622280:intron 35.0%
TGCATGTGGGAAAATAACAA+TGG - chr4_2:74648487-74648506 Msa0622280:intron 35.0%
TAATCTAGAGATTATCCAGG+AGG + chr4_2:74648586-74648605 None:intergenic 35.0%
! AGAAAAACAACAGAAAGTGC+AGG + chr4_2:74648878-74648897 None:intergenic 35.0%
! TATTGGTGGTCCATCTTAAT+TGG - chr4_2:74649271-74649290 Msa0622280:intron 35.0%
! TCTGATTGATAACAAAGGGA+GGG + chr4_2:74649362-74649381 None:intergenic 35.0%
! ATCTGATTGATAACAAAGGG+AGG + chr4_2:74649363-74649382 None:intergenic 35.0%
! TGTTCTTTTCTTTAGTTGGC+TGG + chr4_2:74649425-74649444 None:intergenic 35.0%
! TTTGGAACCAAAGAAAGGAT+AGG - chr4_2:74649585-74649604 Msa0622280:intron 35.0%
TTGGAACCAAAGAAAGGATA+GGG - chr4_2:74649586-74649605 Msa0622280:intron 35.0%
! TAGCGAGGAAAGAAAGTTTT+TGG - chr4_2:74649676-74649695 Msa0622280:intron 35.0%
!!! GAGGAAAGAAAGTTTTTGGT+GGG - chr4_2:74649680-74649699 Msa0622280:intron 35.0%
!!! AGGAAAGAAAGTTTTTGGTG+GGG - chr4_2:74649681-74649700 Msa0622280:intron 35.0%
TATATTGGACAGAAAGGCAA+GGG - chr4_2:74649729-74649748 Msa0622280:intron 35.0%
GAAAGTGAAAAGAAAGTGGA+AGG + chr4_2:74650108-74650127 None:intergenic 35.0%
GAAAGTGAGTAGAAAGTGAA+GGG + chr4_2:74650166-74650185 None:intergenic 35.0%
TGAAAGTGAGTAGAAAGTGA+AGG + chr4_2:74650167-74650186 None:intergenic 35.0%
GTGAAAGGAAAGATAGTATG+AGG + chr4_2:74650207-74650226 None:intergenic 35.0%
GGAACATCAAAGAAAGTGAA+AGG + chr4_2:74650222-74650241 None:intergenic 35.0%
TTTGATGTTCCAAACATACC+AGG - chr4_2:74650231-74650250 Msa0622280:intron 35.0%
TTGATGTTCCAAACATACCA+GGG - chr4_2:74650232-74650251 Msa0622280:intron 35.0%
ATTTCTTAATATGTGCCCCA+AGG - chr4_2:74650394-74650413 Msa0622280:CDS 35.0%
TTTCTTAATATGTGCCCCAA+GGG - chr4_2:74650395-74650414 Msa0622280:CDS 35.0%
AAATGATAACATGTGCCCTT+GGG + chr4_2:74650413-74650432 None:intergenic 35.0%
AAAATGATAACATGTGCCCT+TGG + chr4_2:74650414-74650433 None:intergenic 35.0%
GTTCTCAAAGGTTATACCTT+TGG + chr4_2:74650775-74650794 None:intergenic 35.0%
TTCCATAAACATCACATTCG+CGG + chr4_2:74650923-74650942 None:intergenic 35.0%
! AAGAATTTGTTCACTGCACA+AGG - chr4_2:74651023-74651042 Msa0622280:CDS 35.0%
! AGATTGAAATTCCGGTGTTT+TGG + chr4_2:74651064-74651083 None:intergenic 35.0%
GATAATTTGATTGATCCAGC+AGG - chr4_2:74651200-74651219 Msa0622280:CDS 35.0%
! GCTTTGGATACATTGTTCTA+TGG - chr4_2:74651248-74651267 Msa0622280:CDS 35.0%
ACACCTTTCAACTCAAATCA+AGG + chr4_2:74651430-74651449 None:intergenic 35.0%
GGTTATAAAGCAGATTTACG+TGG + chr4_2:74651596-74651615 None:intergenic 35.0%
TGGATATACTCATTGGAAGT+CGG - chr4_2:74651643-74651662 Msa0622280:five_prime_UTR 35.0%
ATTCTCTCCTTTACCATGAG+AGG - chr4_2:74646577-74646596 Msa0622280:three_prime_UTR 40.0%
TTCTCTCCTTTACCATGAGA+GGG - chr4_2:74646578-74646597 Msa0622280:three_prime_UTR 40.0%
! TGTTTTCCCTCTCATGGTAA+AGG + chr4_2:74646587-74646606 None:intergenic 40.0%
TGGATAAGGTTGAGACACAA+AGG + chr4_2:74646753-74646772 None:intergenic 40.0%
AAGATCTGGGAAAGTGGATA+AGG + chr4_2:74646767-74646786 None:intergenic 40.0%
!!! CATTTGTGGGACTGTTTTTG+AGG + chr4_2:74646791-74646810 None:intergenic 40.0%
GGACAGAGCAAATCATTTGT+GGG + chr4_2:74646804-74646823 None:intergenic 40.0%
AGGACAGAGCAAATCATTTG+TGG + chr4_2:74646805-74646824 None:intergenic 40.0%
CAATCATCTTCCAATTGCAC+CGG - chr4_2:74646850-74646869 Msa0622280:CDS 40.0%
!!! GGTTGTTTTGAGTTCGTCAA+TGG + chr4_2:74646956-74646975 None:intergenic 40.0%
GACTGTCAAACTCTACTTAG+TGG - chr4_2:74647027-74647046 Msa0622280:CDS 40.0%
GACCAATGTGTACACATGTT+TGG - chr4_2:74647056-74647075 Msa0622280:CDS 40.0%
TCCAGGAACTTTCTTCAACA+TGG + chr4_2:74647169-74647188 None:intergenic 40.0%
! TGAAAGATGGGTTTCCATCA+TGG - chr4_2:74647238-74647257 Msa0622280:CDS 40.0%
! GAAAGATGGGTTTCCATCAT+GGG - chr4_2:74647239-74647258 Msa0622280:CDS 40.0%
TAGTAGCTTCCTATCTTTCG+GGG + chr4_2:74647268-74647287 None:intergenic 40.0%
GTAGTAGCTTCCTATCTTTC+GGG + chr4_2:74647269-74647288 None:intergenic 40.0%
AGCAACCACAAGATCAAACT+TGG + chr4_2:74647310-74647329 None:intergenic 40.0%
GATCTTGTGGTTGCTAAAGA+TGG - chr4_2:74647315-74647334 Msa0622280:CDS 40.0%
ACAGGCAACTTTACCACTAT+AGG - chr4_2:74647339-74647358 Msa0622280:CDS 40.0%
AGCAATTGCTTCTCCTATAG+TGG + chr4_2:74647355-74647374 None:intergenic 40.0%
TACCTAGTTGCGCTAGAATT+TGG + chr4_2:74647384-74647403 None:intergenic 40.0%
TGTGATACACATAAAGGCTG+GGG - chr4_2:74647775-74647794 Msa0622280:intron 40.0%
ATGTTAGTTGGAGATGGGAT+TGG - chr4_2:74647842-74647861 Msa0622280:intron 40.0%
CCAGCAGAAATGTTGTAGAT+GGG - chr4_2:74647882-74647901 Msa0622280:intron 40.0%
!! GTGATTTGCTTAGATGCATG+TGG - chr4_2:74648473-74648492 Msa0622280:intron 40.0%
!!! GTCAAATTTTGGTTACCTCC+TGG - chr4_2:74648568-74648587 Msa0622280:intron 40.0%
AAAGACCTTTCCACTGAAAC+TGG - chr4_2:74648608-74648627 Msa0622280:intron 40.0%
AAGACCTTTCCACTGAAACT+GGG - chr4_2:74648609-74648628 Msa0622280:intron 40.0%
ATTCTAATGCAGCTCTGCAT+GGG + chr4_2:74648828-74648847 None:intergenic 40.0%
TATTCTAATGCAGCTCTGCA+TGG + chr4_2:74648829-74648848 None:intergenic 40.0%
TAACAAAGGGAGGGAAAACT+GGG + chr4_2:74649353-74649372 None:intergenic 40.0%
ATAACAAAGGGAGGGAAAAC+TGG + chr4_2:74649354-74649373 None:intergenic 40.0%
! TCTTTTCTTTAGTTGGCTGG+TGG + chr4_2:74649422-74649441 None:intergenic 40.0%
! GTGTGTTTGGAACCAAAGAA+AGG - chr4_2:74649580-74649599 Msa0622280:intron 40.0%
GTCTTTCCCTATCCTTTCTT+TGG + chr4_2:74649595-74649614 None:intergenic 40.0%
AAATCCGAGCTTCCATAGTT+TGG - chr4_2:74649640-74649659 Msa0622280:intron 40.0%
CTTTCCTCGCTACAGTAAAA+TGG + chr4_2:74649668-74649687 None:intergenic 40.0%
!! CGAGGAAAGAAAGTTTTTGG+TGG - chr4_2:74649679-74649698 Msa0622280:intron 40.0%
AGTGGAAACAATTCTGAGCA+TGG + chr4_2:74649708-74649727 None:intergenic 40.0%
CCTTTCTGTCCAATATAGAG+TGG + chr4_2:74649726-74649745 None:intergenic 40.0%
CCACTCTATATTGGACAGAA+AGG - chr4_2:74649723-74649742 Msa0622280:intron 40.0%
CTATATTGGACAGAAAGGCA+AGG - chr4_2:74649728-74649747 Msa0622280:intron 40.0%
!!! CAAATATTTTGGCAACCACG+TGG - chr4_2:74649819-74649838 Msa0622280:intron 40.0%
TTTCCAATGCTATATCCACG+TGG + chr4_2:74649837-74649856 None:intergenic 40.0%
! ACGTGGATATAGCATTGGAA+AGG - chr4_2:74649836-74649855 Msa0622280:intron 40.0%
! CGTGGATATAGCATTGGAAA+GGG - chr4_2:74649837-74649856 Msa0622280:intron 40.0%
TAACAAGACCCTGGTATGTT+TGG + chr4_2:74650243-74650262 None:intergenic 40.0%
! TCTTGTTATCTTGTGCCCTT+AGG - chr4_2:74650255-74650274 Msa0622280:intron 40.0%
! CTTGTTATCTTGTGCCCTTA+GGG - chr4_2:74650256-74650275 Msa0622280:intron 40.0%
!! TTCCTTAACTTGTGCCCTAA+GGG + chr4_2:74650273-74650292 None:intergenic 40.0%
!! ATTCCTTAACTTGTGCCCTA+AGG + chr4_2:74650274-74650293 None:intergenic 40.0%
AATGATAACATGTGCCCTTG+GGG + chr4_2:74650412-74650431 None:intergenic 40.0%
GAGAGACCAAAAAGAGAAAG+AGG - chr4_2:74650548-74650567 Msa0622280:intron 40.0%
GGAGACAAATTCATAGCCAA+AGG - chr4_2:74650756-74650775 Msa0622280:intron 40.0%
! ATAACCTTTGAGAACTCAGC+CGG - chr4_2:74650780-74650799 Msa0622280:intron 40.0%
CACAAAGCTACATTGGTAGA+AGG + chr4_2:74650856-74650875 None:intergenic 40.0%
! CTTCTACCAATGTAGCTTTG+TGG - chr4_2:74650854-74650873 Msa0622280:CDS 40.0%
TACCGCGAATGTGATGTTTA+TGG - chr4_2:74650918-74650937 Msa0622280:CDS 40.0%
GGAACTGTAGACTTCATCTT+TGG - chr4_2:74650939-74650958 Msa0622280:CDS 40.0%
! GTGCATATAGGTTGCAGTTT+TGG + chr4_2:74650983-74651002 None:intergenic 40.0%
GAAGATCCTAACCAAAACAC+CGG - chr4_2:74651050-74651069 Msa0622280:CDS 40.0%
!!! GAAATTCCGGTGTTTTGGTT+AGG + chr4_2:74651059-74651078 None:intergenic 40.0%
TTGTACTGGAATCAAATCCG+CGG + chr4_2:74651108-74651127 None:intergenic 40.0%
! CTCTTGAACGTTGATTGTAC+TGG + chr4_2:74651122-74651141 None:intergenic 40.0%
TCAACGTTCAAGAGTTACCT+CGG - chr4_2:74651128-74651147 Msa0622280:CDS 40.0%
ATTTGATTGATCCAGCAGGA+TGG - chr4_2:74651204-74651223 Msa0622280:CDS 40.0%
ATGGAATGGAACGTTTGCTT+TGG - chr4_2:74651232-74651251 Msa0622280:CDS 40.0%
GAGTATAAGAATAGAGGTCC+TGG - chr4_2:74651272-74651291 Msa0622280:CDS 40.0%
AGTCATTACAAACACTACCG+AGG - chr4_2:74651334-74651353 Msa0622280:CDS 40.0%
AATGAATGGTTGAGCTCTAC+TGG - chr4_2:74651392-74651411 Msa0622280:CDS 40.0%
TATGGAGGATTTGATAGGCT+TGG - chr4_2:74651797-74651816 Msa0622280:five_prime_UTR 40.0%
ATTGGCATGAGAGCAAGCAA+TGG + chr4_2:74646613-74646632 None:intergenic 45.0%
! ATGCTGATTGGGCTACTGTT+TGG + chr4_2:74646708-74646727 None:intergenic 45.0%
! TGTTCCTTCGCATGCTGATT+GGG + chr4_2:74646719-74646738 None:intergenic 45.0%
AGGTTGAGACACAAAGGTCT+GGG + chr4_2:74646747-74646766 None:intergenic 45.0%
AAGGTTGAGACACAAAGGTC+TGG + chr4_2:74646748-74646767 None:intergenic 45.0%
TGAGGTAAGATCTGGGAAAG+TGG + chr4_2:74646773-74646792 None:intergenic 45.0%
CTTACTGCTAGAAGCTACTG+TGG + chr4_2:74647004-74647023 None:intergenic 45.0%
GCCATGTTGAAGAAAGTTCC+TGG - chr4_2:74647165-74647184 Msa0622280:CDS 45.0%
! GAAGCTTTAGTCTTCACTCC+AGG + chr4_2:74647186-74647205 None:intergenic 45.0%
CTCCAAATTCTAGCGCAACT+AGG - chr4_2:74647379-74647398 Msa0622280:CDS 45.0%
CCATGGACCATGTTCAATTG+TGG + chr4_2:74647651-74647670 None:intergenic 45.0%
CCACAATTGAACATGGTCCA+TGG - chr4_2:74647648-74647667 Msa0622280:intron 45.0%
TGAACATGGTCCATGGAGAT+TGG - chr4_2:74647655-74647674 Msa0622280:intron 45.0%
! TGGGGCTTACTTTGAAAACG+TGG - chr4_2:74647793-74647812 Msa0622280:intron 45.0%
GATTGGACAGACTGTTGTGA+AGG - chr4_2:74647859-74647878 Msa0622280:intron 45.0%
GCCAGCAGAAATGTTGTAGA+TGG - chr4_2:74647881-74647900 Msa0622280:intron 45.0%
CCCATCTACAACATTTCTGC+TGG + chr4_2:74647885-74647904 None:intergenic 45.0%
GCAGAAATGTTGTAGATGGG+TGG - chr4_2:74647885-74647904 Msa0622280:intron 45.0%
AGACCTTTCCACTGAAACTG+GGG - chr4_2:74648610-74648629 Msa0622280:intron 45.0%
TATCAGACATGTGACGTGTG+AGG - chr4_2:74649224-74649243 Msa0622280:intron 45.0%
GATAGGGAAAGACAGCTATG+AGG - chr4_2:74649602-74649621 Msa0622280:intron 45.0%
GGATCCAAACTATGGAAGCT+CGG + chr4_2:74649647-74649666 None:intergenic 45.0%
! GGATCCATTTTACTGTAGCG+AGG - chr4_2:74649661-74649680 Msa0622280:intron 45.0%
CAACCACGTGGATATAGCAT+TGG - chr4_2:74649831-74649850 Msa0622280:intron 45.0%
!! TTGGTGGTTTTCAGCTGTTG+TGG - chr4_2:74650734-74650753 Msa0622280:intron 45.0%
! TGGTGGTTTTCAGCTGTTGT+GGG - chr4_2:74650735-74650754 Msa0622280:intron 45.0%
TAGCAAACATCAAGCGGTAG+CGG - chr4_2:74650806-74650825 Msa0622280:intron 45.0%
TTGGTAGAAGGCTGAGAAGT+CGG + chr4_2:74650844-74650863 None:intergenic 45.0%
GGTAAGCCACAAAGCTACAT+TGG + chr4_2:74650863-74650882 None:intergenic 45.0%
!! ATGTAGCTTTGTGGCTTACC+AGG - chr4_2:74650863-74650882 Msa0622280:CDS 45.0%
CACATTCGCGGTAGAATTGA+CGG + chr4_2:74650911-74650930 None:intergenic 45.0%
CTTCATCTTTGGCAATGCAG+CGG - chr4_2:74650950-74650969 Msa0622280:CDS 45.0%
TTGTAAAATTGCAGCTGCCG+CGG - chr4_2:74651088-74651107 Msa0622280:CDS 45.0%
!!! ATTTTTTCCAAGGACGACCG+AGG + chr4_2:74651148-74651167 None:intergenic 45.0%
ATCCAGCAGGATGGTTAGAA+TGG - chr4_2:74651213-74651232 Msa0622280:CDS 45.0%
TTCCATTCTAACCATCCTGC+TGG + chr4_2:74651218-74651237 None:intergenic 45.0%
GCAGGATGGTTAGAATGGAA+TGG - chr4_2:74651218-74651237 Msa0622280:CDS 45.0%
!! AACAGTGAACTGACTTGCCT+CGG + chr4_2:74651354-74651373 None:intergenic 45.0%
ATAGGCTTGGCAACGATTGT+CGG - chr4_2:74651810-74651829 Msa0622280:five_prime_UTR 45.0%
!!! AATTATTTTATCTTTTTTAA+GGG + chr4_2:74648062-74648081 None:intergenic 5.0%
!!! TTTAAAATTTTAAAATCTAT+TGG - chr4_2:74649254-74649273 Msa0622280:intron 5.0%
!!! TGGTGCTGTTTTCCCTCTCA+TGG + chr4_2:74646593-74646612 None:intergenic 50.0%
GTGTTCCTTCGCATGCTGAT+TGG + chr4_2:74646720-74646739 None:intergenic 50.0%
AAGTCGAAGTCCGGTGCAAT+TGG + chr4_2:74646863-74646882 None:intergenic 50.0%
ACTTGACCAAAGAGCCCTTG+AGG - chr4_2:74646906-74646925 Msa0622280:CDS 50.0%
CACAATCCTCAAGGGCTCTT+TGG + chr4_2:74646915-74646934 None:intergenic 50.0%
GTGGTTGCTAAAGATGGCAC+AGG - chr4_2:74647321-74647340 Msa0622280:CDS 50.0%
!! ATATGGTGTTGCACACGTCG+TGG - chr4_2:74647451-74647470 Msa0622280:CDS 50.0%
GACCTTTCCACTGAAACTGG+GGG - chr4_2:74648611-74648630 Msa0622280:intron 50.0%
AACCCCCAGTTTCAGTGGAA+AGG + chr4_2:74648616-74648635 None:intergenic 50.0%
CTGTTAACCCCCAGTTTCAG+TGG + chr4_2:74648621-74648640 None:intergenic 50.0%
!! AGCGTCGGTTGTCTGACAAA+GGG - chr4_2:74648921-74648940 Msa0622280:intron 50.0%
ATTGGACAGAAAGGCAAGGG+AGG - chr4_2:74649732-74649751 Msa0622280:intron 50.0%
TTGGACAGAAAGGCAAGGGA+GGG - chr4_2:74649733-74649752 Msa0622280:intron 50.0%
GGCACAAGATAACAAGACCC+TGG + chr4_2:74650252-74650271 None:intergenic 50.0%
TGCCCTTAGGGCACAAGTTA+AGG - chr4_2:74650268-74650287 Msa0622280:intron 50.0%
! CGCTTGATGTTTGCTAGGTC+CGG + chr4_2:74650802-74650821 None:intergenic 50.0%
CGGACCTAGCAAACATCAAG+CGG - chr4_2:74650800-74650819 Msa0622280:intron 50.0%
GCTACCGCTTGATGTTTGCT+AGG + chr4_2:74650807-74650826 None:intergenic 50.0%
!! AGTGGACATAGAGAGTGTCC+TGG + chr4_2:74650884-74650903 None:intergenic 50.0%
TTCGCGGTAGAATTGACGGA+GGG + chr4_2:74650907-74650926 None:intergenic 50.0%
ATTCGCGGTAGAATTGACGG+AGG + chr4_2:74650908-74650927 None:intergenic 50.0%
GATCGGGTTTGCGTGCATAT+AGG + chr4_2:74650995-74651014 None:intergenic 50.0%
CTGGCACTTGTATTCGAACC+AGG + chr4_2:74651293-74651312 None:intergenic 50.0%
GTAGCCCAATCAGCATGCGA+AGG - chr4_2:74646712-74646731 Msa0622280:three_prime_UTR 55.0%
TCTTTCGGGGACACCCATGA+TGG + chr4_2:74647255-74647274 None:intergenic 55.0%
CATGGGTGTCCCCGAAAGAT+AGG - chr4_2:74647256-74647275 Msa0622280:CDS 55.0%
TCGAAATCACGGACCAGCGT+CGG - chr4_2:74648906-74648925 Msa0622280:intron 55.0%
CTTTGTCAGACAACCGACGC+TGG + chr4_2:74648922-74648941 None:intergenic 55.0%
!! CAGCGTCGGTTGTCTGACAA+AGG - chr4_2:74648920-74648939 Msa0622280:intron 55.0%
TGGACAGAAAGGCAAGGGAG+GGG - chr4_2:74649734-74649753 Msa0622280:intron 55.0%
AGGTCCGGCTGAGTTCTCAA+AGG + chr4_2:74650787-74650806 None:intergenic 55.0%
! CAAGCGGTAGCGGTGAGAAA+TGG - chr4_2:74650816-74650835 Msa0622280:intron 55.0%
GGTAGAATTGACGGAGGGAG+TGG + chr4_2:74650902-74650921 None:intergenic 55.0%
CATCTTTGGCAATGCAGCGG+TGG - chr4_2:74650953-74650972 Msa0622280:CDS 55.0%
AGAGTTACCTCGGTCGTCCT+TGG - chr4_2:74651138-74651157 Msa0622280:CDS 55.0%
TGCACCGGACTTCGACTTCG+CGG - chr4_2:74646865-74646884 Msa0622280:CDS 60.0%
TCGACCGCGAAGTCGAAGTC+CGG + chr4_2:74646872-74646891 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 74646313 74651909 74646313 ID=Msa0622280;Name=Msa0622280
chr4_2 mRNA 74646313 74651909 74646313 ID=Msa0622280-mRNA-1;Parent=Msa0622280;Name=Msa0622280-mRNA-1;_AED=0.00;_eAED=0.00;_QI=279|1|1|1|1|1|3|467|554
chr4_2 exon 74646313 74647474 74646313 ID=Msa0622280-mRNA-1:exon:22567;Parent=Msa0622280-mRNA-1
chr4_2 exon 74650290 74650450 74650290 ID=Msa0622280-mRNA-1:exon:22566;Parent=Msa0622280-mRNA-1
chr4_2 exon 74650822 74651909 74650822 ID=Msa0622280-mRNA-1:exon:22565;Parent=Msa0622280-mRNA-1
chr4_2 five_prime_UTR 74651631 74651909 74651631 ID=Msa0622280-mRNA-1:five_prime_utr;Parent=Msa0622280-mRNA-1
chr4_2 CDS 74650822 74651630 74650822 ID=Msa0622280-mRNA-1:cds;Parent=Msa0622280-mRNA-1
chr4_2 CDS 74650290 74650450 74650290 ID=Msa0622280-mRNA-1:cds;Parent=Msa0622280-mRNA-1
chr4_2 CDS 74646780 74647474 74646780 ID=Msa0622280-mRNA-1:cds;Parent=Msa0622280-mRNA-1
chr4_2 three_prime_UTR 74646313 74646779 74646313 ID=Msa0622280-mRNA-1:three_prime_utr;Parent=Msa0622280-mRNA-1
Gene Sequence

>Msa0622280

ATGAGAGGGAAAACAGCACCATTGCTTGCTCTCATGCCAATTCTCTCCACAATTTTAGTTCTAATATTTTCAGTAACCAATTTCTCAAAATTAGCAACAGCAACAGCAACACTCCAAACAGTAGCCCAATCAGCATGCGAAGGAACACTCTACCCAGACCTTTGTGTCTCAACCTTATCCACTTTCCCAGATCTTACCTCAAAAACAGTCCCACAAATGATTTGCTCTGTCCTAAACAACACCATAAAAGAGGTTAAACAATCATCTTCCAATTGCACCGGACTTCGACTTCGCGGTCGAAGTGCACAAAGCATACTTGACCAAAGAGCCCTTGAGGATTGTGTTAATTTATTTGACACTACCATTGACGAACTCAAAACAACCATTTCTGATCTCTCTCAAACTCAAACCACAGTAGCTTCTAGCAGTAAGCGTGACTGTCAAACTCTACTTAGTGGTGCAATGACCAATGTGTACACATGTTTGGATGGTTTTGCATATAGTAAATCAAAATTGAGAAAAAAAATTGAGGCCAAGTTGAATGATATTTCTAGTCACGTTAGTAACTCACTTGCCATGTTGAAGAAAGTTCCTGGAGTGAAGACTAAAGCTTCTGAGTCTGAAACTTTCCCTGAATATGGTAAAGTGAAAGATGGGTTTCCATCATGGGTGTCCCCGAAAGATAGGAAGCTACTACAAGCTGCAGTGAATCAAACCAAGTTTGATCTTGTGGTTGCTAAAGATGGCACAGGCAACTTTACCACTATAGGAGAAGCAATTGCTGCAGCTCCAAATTCTAGCGCAACTAGATTTGTGATACACATAAAGGCTGGGGCTTACTTTGAAAACGTGGAAGTGATAAAGAAGAAAACCAATTTGATGTTAGTTGGAGATGGGATTGGACAGACTGTTGTGAAGGCCAGCAGAAATGTTGTAGATGGGTGGACCACTTTCCAATCATCTACTTTTGCTGTTGTGGGAGACAAATTCATAGCCAAAGGTATAACCTTTGAGAACTCAGCCGGACCTAGCAAACATCAAGCGGTAGCGGTGAGAAATGGCGCCGACTTCTCAGCCTTCTACCAATGTAGCTTTGTGGCTTACCAGGACACTCTCTATGTCCACTCCCTCCGTCAATTCTACCGCGAATGTGATGTTTATGGAACTGTAGACTTCATCTTTGGCAATGCAGCGGTGGTATTCCAAAACTGCAACCTATATGCACGCAAACCCGATCCAAAGCAAAAGAATTTGTTCACTGCACAAGGCAGAGAAGATCCTAACCAAAACACCGGAATTTCAATCTTGAATTGTAAAATTGCAGCTGCCGCGGATTTGATTCCAGTACAATCAACGTTCAAGAGTTACCTCGGTCGTCCTTGGAAAAAATATTCAAGAACTGTTTATCTGAATTCTTTTATAGATAATTTGATTGATCCAGCAGGATGGTTAGAATGGAATGGAACGTTTGCTTTGGATACATTGTTCTATGGTGAGTATAAGAATAGAGGTCCTGGTTCGAATACAAGTGCCAGAGTTACGTGGCCAGGTTATAAAGTCATTACAAACACTACCGAGGCAAGTCAGTTCACTGTTAGACAATTTATACAAGGAAATGAATGGTTGAGCTCTACTGGAGTTCCATTTTTCCTTGATTTGAGTTGA
Protein sequence

>Msa0622280

MRGKTAPLLALMPILSTILVLIFSVTNFSKLATATATLQTVAQSACEGTLYPDLCVSTLSTFPDLTSKTVPQMICSVLNNTIKEVKQSSSNCTGLRLRGRSAQSILDQRALEDCVNLFDTTIDELKTTISDLSQTQTTVASSSKRDCQTLLSGAMTNVYTCLDGFAYSKSKLRKKIEAKLNDISSHVSNSLAMLKKVPGVKTKASESETFPEYGKVKDGFPSWVSPKDRKLLQAAVNQTKFDLVVAKDGTGNFTTIGEAIAAAPNSSATRFVIHIKAGAYFENVEVIKKKTNLMLVGDGIGQTVVKASRNVVDGWTTFQSSTFAVVGDKFIAKGITFENSAGPSKHQAVAVRNGADFSAFYQCSFVAYQDTLYVHSLRQFYRECDVYGTVDFIFGNAAVVFQNCNLYARKPDPKQKNLFTAQGREDPNQNTGISILNCKIAAAADLIPVQSTFKSYLGRPWKKYSRTVYLNSFIDNLIDPAGWLEWNGTFALDTLFYGEYKNRGPGSNTSARVTWPGYKVITNTTEASQFTVRQFIQGNEWLSSTGVPFFLDLS*