Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450030 | sp|Q93X62|FABG1_BRANA | 73.754 | 301 | 78 | 1 | 21 | 320 | 20 | 320 | 6.60e-158 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450030 | G7JC28 | 96.562 | 320 | 11 | 0 | 1 | 320 | 1 | 320 | 0.0 | 623 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa1450030 | 0.817629 | 2.986817e-52 | -8.615850e-47 |
| Msa0032400 | Msa1450030 | 0.818730 | 1.682777e-52 | -8.615850e-47 |
| Msa0048020 | Msa1450030 | 0.803873 | 2.832370e-49 | -8.615850e-47 |
| Msa0082820 | Msa1450030 | 0.800206 | 1.606538e-48 | -8.615850e-47 |
| Msa0110710 | Msa1450030 | 0.801394 | 9.193316e-49 | -8.615850e-47 |
| Msa1354040 | Msa1450030 | 0.815345 | 9.697833e-52 | -8.615850e-47 |
| Msa1366430 | Msa1450030 | 0.805619 | 1.223023e-49 | -8.615850e-47 |
| Msa1379570 | Msa1450030 | 0.800371 | 1.487185e-48 | -8.615850e-47 |
| Msa1382720 | Msa1450030 | 0.800036 | 1.739886e-48 | -8.615850e-47 |
| Msa1398480 | Msa1450030 | 0.800926 | 1.145733e-48 | -8.615850e-47 |
| Msa1419850 | Msa1450030 | 0.821248 | 4.466866e-53 | -8.615850e-47 |
| Msa1442300 | Msa1450030 | 0.810940 | 8.975699e-51 | -8.615850e-47 |
| Msa1447230 | Msa1450030 | 0.803442 | 3.480010e-49 | -8.615850e-47 |
| Msa1450030 | Msa1454020 | 0.882779 | 7.826060e-71 | -8.615850e-47 |
| Msa0620090 | Msa1450030 | 0.815628 | 8.386249e-52 | -8.615850e-47 |
| Msa0622280 | Msa1450030 | 0.821781 | 3.364737e-53 | -8.615850e-47 |
| Msa0640880 | Msa1450030 | 0.831086 | 2.037856e-55 | -8.615850e-47 |
| Msa0642650 | Msa1450030 | 0.816857 | 4.453527e-52 | -8.615850e-47 |
| Msa0659960 | Msa1450030 | 0.805823 | 1.108125e-49 | -8.615850e-47 |
| Msa0681890 | Msa1450030 | 0.815756 | 7.852180e-52 | -8.615850e-47 |
| Msa0688540 | Msa1450030 | 0.807275 | 5.474205e-50 | -8.615850e-47 |
| Msa0703720 | Msa1450030 | 0.805391 | 1.365732e-49 | -8.615850e-47 |
| Msa0706970 | Msa1450030 | 0.800329 | 1.516627e-48 | -8.615850e-47 |
| Msa0709480 | Msa1450030 | 0.822054 | 2.908479e-53 | -8.615850e-47 |
| Msa0717090 | Msa1450030 | 0.817118 | 3.892125e-52 | -8.615850e-47 |
| Msa0722940 | Msa1450030 | 0.810498 | 1.118613e-50 | -8.615850e-47 |
| Msa0723150 | Msa1450030 | 0.801224 | 9.961690e-49 | -8.615850e-47 |
| Msa0748290 | Msa1450030 | 0.804860 | 1.763343e-49 | -8.615850e-47 |
| Msa0790830 | Msa1450030 | 0.807876 | 4.079742e-50 | -8.615850e-47 |
| Msa0799210 | Msa1450030 | 0.812893 | 3.371038e-51 | -8.615850e-47 |
| Msa0803130 | Msa1450030 | 0.816032 | 6.816100e-52 | -8.615850e-47 |
| Msa0803920 | Msa1450030 | 0.805647 | 1.206607e-49 | -8.615850e-47 |
| Msa0841490 | Msa1450030 | 0.817077 | 3.976060e-52 | -8.615850e-47 |
| Msa0139900 | Msa1450030 | 0.825644 | 4.188508e-54 | -8.615850e-47 |
| Msa0141430 | Msa1450030 | 0.803483 | 3.411662e-49 | -8.615850e-47 |
| Msa0146470 | Msa1450030 | 0.809987 | 1.442178e-50 | -8.615850e-47 |
| Msa0157020 | Msa1450030 | 0.805360 | 1.386088e-49 | -8.615850e-47 |
| Msa0185700 | Msa1450030 | 0.812401 | 4.318358e-51 | -8.615850e-47 |
| Msa0200970 | Msa1450030 | 0.809373 | 1.953610e-50 | -8.615850e-47 |
| Msa0227500 | Msa1450030 | 0.802604 | 5.184508e-49 | -8.615850e-47 |
| Msa0230400 | Msa1450030 | 0.809798 | 1.583767e-50 | -8.615850e-47 |
| Msa1226620 | Msa1450030 | 0.823786 | 1.147941e-53 | -8.615850e-47 |
| Msa1232860 | Msa1450030 | 0.805303 | 1.424480e-49 | -8.615850e-47 |
| Msa1261360 | Msa1450030 | 0.800268 | 1.561135e-48 | -8.615850e-47 |
| Msa1261370 | Msa1450030 | 0.803940 | 2.741999e-49 | -8.615850e-47 |
| Msa1261400 | Msa1450030 | 0.808728 | 2.686070e-50 | -8.615850e-47 |
| Msa1277600 | Msa1450030 | 0.816598 | 5.092358e-52 | -8.615850e-47 |
| Msa1284030 | Msa1450030 | 0.837064 | 6.480412e-57 | -8.615850e-47 |
| Msa1307370 | Msa1450030 | 0.806065 | 9.856118e-50 | -8.615850e-47 |
| Msa1313460 | Msa1450030 | 0.804440 | 2.157966e-49 | -8.615850e-47 |
| Msa1315980 | Msa1450030 | 0.802268 | 6.081958e-49 | -8.615850e-47 |
| Msa1323060 | Msa1450030 | 0.814284 | 1.666311e-51 | -8.615850e-47 |
| Msa0382560 | Msa1450030 | 0.811540 | 6.651822e-51 | -8.615850e-47 |
| Msa0388720 | Msa1450030 | 0.840412 | 8.834040e-58 | -8.615850e-47 |
| Msa0417630 | Msa1450030 | 0.801130 | 1.040938e-48 | -8.615850e-47 |
| Msa0468610 | Msa1450030 | 0.920047 | 2.096254e-87 | -8.615850e-47 |
| Msa0990520 | Msa1450030 | 0.810279 | 1.247379e-50 | -8.615850e-47 |
| Msa1002040 | Msa1450030 | 0.801027 | 1.092542e-48 | -8.615850e-47 |
| Msa1004500 | Msa1450030 | 0.824159 | 9.385459e-54 | -8.615850e-47 |
| Msa1004520 | Msa1450030 | 0.804860 | 1.763331e-49 | -8.615850e-47 |
| Msa1018790 | Msa1450030 | 0.803198 | 3.909259e-49 | -8.615850e-47 |
| Msa1022310 | Msa1450030 | 0.816383 | 5.689405e-52 | -8.615850e-47 |
| Msa1023960 | Msa1450030 | 0.806315 | 8.730630e-50 | -8.615850e-47 |
| Msa1045880 | Msa1450030 | 0.810329 | 1.216984e-50 | -8.615850e-47 |
| Msa1045970 | Msa1450030 | 0.803394 | 3.560137e-49 | -8.615850e-47 |
| Msa1046870 | Msa1450030 | 0.827752 | 1.315212e-54 | -8.615850e-47 |
| Msa1061180 | Msa1450030 | 0.822587 | 2.187220e-53 | -8.615850e-47 |
| Msa1072080 | Msa1450030 | 0.814076 | 1.851660e-51 | -8.615850e-47 |
| Msa1103670 | Msa1450030 | 0.800308 | 1.532042e-48 | -8.615850e-47 |
| Msa0239660 | Msa1450030 | 0.806378 | 8.467851e-50 | -8.615850e-47 |
| Msa0274780 | Msa1450030 | 0.808572 | 2.899106e-50 | -8.615850e-47 |
| Msa0277640 | Msa1450030 | 0.802923 | 4.456134e-49 | -8.615850e-47 |
| Msa0297920 | Msa1450030 | 0.819283 | 1.260089e-52 | -8.615850e-47 |
| Msa0314790 | Msa1450030 | 0.801115 | 1.048387e-48 | -8.615850e-47 |
| Msa0315480 | Msa1450030 | 0.809055 | 2.285731e-50 | -8.615850e-47 |
| Msa1122160 | Msa1450030 | 0.821240 | 4.484824e-53 | -8.615850e-47 |
| Msa1125780 | Msa1450030 | 0.802869 | 4.572426e-49 | -8.615850e-47 |
| Msa1125950 | Msa1450030 | 0.804818 | 1.799513e-49 | -8.615850e-47 |
| Msa1147270 | Msa1450030 | 0.801264 | 9.771736e-49 | -8.615850e-47 |
| Msa1160570 | Msa1450030 | 0.823430 | 1.390751e-53 | -8.615850e-47 |
| Msa1171340 | Msa1450030 | 0.810182 | 1.308827e-50 | -8.615850e-47 |
| Msa1175750 | Msa1450030 | 0.818866 | 1.567235e-52 | -8.615850e-47 |
| Msa1200920 | Msa1450030 | 0.805647 | 1.206426e-49 | -8.615850e-47 |
| Msa0514490 | Msa1450030 | 0.923197 | 3.646182e-89 | -8.615850e-47 |
| Msa0519200 | Msa1450030 | 0.809955 | 1.464633e-50 | -8.615850e-47 |
| Msa0526700 | Msa1450030 | 0.800319 | 1.523627e-48 | -8.615850e-47 |
| Msa0538570 | Msa1450030 | 0.823664 | 1.226170e-53 | -8.615850e-47 |
| Msa0578900 | Msa1450030 | 0.806723 | 7.161187e-50 | -8.615850e-47 |
| Msa0581340 | Msa1450030 | 0.801883 | 7.297270e-49 | -8.615850e-47 |
| Msa0594390 | Msa1450030 | 0.827000 | 1.991414e-54 | -8.615850e-47 |
| Msa0600390 | Msa1450030 | 0.816524 | 5.289200e-52 | -8.615850e-47 |
| Msa0863440 | Msa1450030 | 0.806793 | 6.922952e-50 | -8.615850e-47 |
| Msa0900320 | Msa1450030 | 0.801317 | 9.533172e-49 | -8.615850e-47 |
| Msa0930330 | Msa1450030 | 0.811372 | 7.234197e-51 | -8.615850e-47 |
| Msa0931480 | Msa1450030 | 0.822872 | 1.877940e-53 | -8.615850e-47 |
| Msa0931610 | Msa1450030 | 0.819234 | 1.292723e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450030 | MtrunA17_Chr3g0122901 | 96.562 | 320 | 11 | 0 | 1 | 320 | 1 | 320 | 0.0 | 623 |
| Msa1450030 | MtrunA17_Chr7g0259521 | 35.714 | 252 | 155 | 5 | 75 | 320 | 6 | 256 | 1.55e-38 | 137 |
| Msa1450030 | MtrunA17_Chr4g0026001 | 33.074 | 257 | 158 | 7 | 71 | 320 | 10 | 259 | 8.44e-36 | 130 |
| Msa1450030 | MtrunA17_Chr7g0259531 | 35.223 | 247 | 151 | 6 | 79 | 318 | 15 | 259 | 1.21e-35 | 129 |
| Msa1450030 | MtrunA17_Chr4g0025971 | 32.549 | 255 | 162 | 6 | 69 | 318 | 8 | 257 | 1.04e-34 | 127 |
| Msa1450030 | MtrunA17_Chr4g0028921 | 31.923 | 260 | 167 | 6 | 70 | 320 | 6 | 264 | 2.63e-32 | 121 |
| Msa1450030 | MtrunA17_Chr4g0028911 | 32.197 | 264 | 161 | 9 | 70 | 320 | 6 | 264 | 4.53e-31 | 117 |
| Msa1450030 | MtrunA17_Chr4g0032141 | 30.072 | 276 | 188 | 4 | 46 | 318 | 27 | 300 | 8.13e-31 | 118 |
| Msa1450030 | MtrunA17_Chr1g0171831 | 35.769 | 260 | 142 | 12 | 70 | 310 | 9 | 262 | 1.78e-30 | 115 |
| Msa1450030 | MtrunA17_Chr3g0112261 | 31.707 | 246 | 157 | 5 | 81 | 320 | 25 | 265 | 1.43e-29 | 114 |
| Msa1450030 | MtrunA17_Chr7g0272961 | 30.451 | 266 | 153 | 7 | 74 | 320 | 39 | 291 | 1.47e-29 | 114 |
| Msa1450030 | MtrunA17_Chr6g0459261 | 30.739 | 257 | 159 | 8 | 74 | 318 | 24 | 273 | 1.60e-29 | 114 |
| Msa1450030 | MtrunA17_Chr7g0244061 | 27.957 | 279 | 156 | 6 | 73 | 318 | 27 | 293 | 1.93e-29 | 114 |
| Msa1450030 | MtrunA17_Chr4g0025981 | 30.522 | 249 | 155 | 6 | 79 | 318 | 45 | 284 | 2.69e-29 | 114 |
| Msa1450030 | MtrunA17_Chr1g0182511 | 35.686 | 255 | 152 | 7 | 74 | 319 | 13 | 264 | 5.46e-29 | 112 |
| Msa1450030 | MtrunA17_Chr3g0112151 | 30.488 | 246 | 160 | 6 | 81 | 320 | 92 | 332 | 1.60e-28 | 112 |
| Msa1450030 | MtrunA17_Chr3g0112171 | 30.488 | 246 | 160 | 6 | 81 | 320 | 21 | 261 | 3.19e-28 | 110 |
| Msa1450030 | MtrunA17_Chr7g0268591 | 28.517 | 263 | 171 | 6 | 68 | 318 | 26 | 283 | 1.36e-27 | 109 |
| Msa1450030 | MtrunA17_Chr1g0191751 | 29.572 | 257 | 167 | 6 | 74 | 320 | 100 | 352 | 1.69e-27 | 110 |
| Msa1450030 | MtrunA17_Chr7g0266981 | 30.916 | 262 | 158 | 9 | 70 | 318 | 8 | 259 | 2.72e-27 | 107 |
| Msa1450030 | MtrunA17_Chr6g0459351 | 30.916 | 262 | 158 | 9 | 69 | 316 | 7 | 259 | 3.49e-27 | 107 |
| Msa1450030 | MtrunA17_Chr4g0074511 | 30.739 | 257 | 165 | 8 | 74 | 320 | 39 | 292 | 4.23e-27 | 107 |
| Msa1450030 | MtrunA17_Chr7g0239481 | 30.000 | 250 | 160 | 5 | 81 | 320 | 21 | 265 | 1.07e-26 | 105 |
| Msa1450030 | MtrunA17_Chr4g0044111 | 30.916 | 262 | 158 | 9 | 70 | 318 | 8 | 259 | 1.13e-26 | 106 |
| Msa1450030 | MtrunA17_Chr7g0267011 | 31.795 | 195 | 124 | 4 | 73 | 263 | 6 | 195 | 1.43e-26 | 103 |
| Msa1450030 | MtrunA17_Chr7g0252031 | 30.682 | 264 | 165 | 6 | 68 | 318 | 28 | 286 | 2.14e-26 | 105 |
| Msa1450030 | MtrunA17_Chr7g0239491 | 30.400 | 250 | 154 | 7 | 81 | 318 | 21 | 262 | 3.54e-26 | 104 |
| Msa1450030 | MtrunA17_Chr7g0239511 | 30.435 | 253 | 155 | 6 | 81 | 320 | 22 | 266 | 5.13e-26 | 104 |
| Msa1450030 | MtrunA17_Chr4g0032181 | 32.870 | 216 | 139 | 5 | 109 | 320 | 34 | 247 | 5.13e-26 | 103 |
| Msa1450030 | MtrunA17_Chr3g0112141 | 29.508 | 244 | 161 | 6 | 81 | 318 | 23 | 261 | 5.58e-26 | 104 |
| Msa1450030 | MtrunA17_Chr6g0459301 | 30.233 | 258 | 159 | 8 | 74 | 318 | 13 | 262 | 1.08e-25 | 103 |
| Msa1450030 | MtrunA17_Chr6g0459271 | 31.274 | 259 | 155 | 8 | 74 | 318 | 12 | 261 | 1.25e-25 | 103 |
| Msa1450030 | MtrunA17_Chr0c30g0494101 | 29.572 | 257 | 166 | 8 | 74 | 320 | 39 | 290 | 1.49e-25 | 103 |
| Msa1450030 | MtrunA17_Chr7g0239501 | 29.880 | 251 | 159 | 6 | 81 | 320 | 22 | 266 | 2.49e-25 | 102 |
| Msa1450030 | MtrunA17_Chr3g0112271 | 29.675 | 246 | 162 | 5 | 81 | 320 | 23 | 263 | 2.68e-25 | 102 |
| Msa1450030 | MtrunA17_Chr4g0044131 | 28.346 | 254 | 167 | 7 | 73 | 317 | 6 | 253 | 1.78e-24 | 100 |
| Msa1450030 | MtrunA17_Chr4g0075531 | 30.739 | 257 | 160 | 8 | 70 | 318 | 2 | 248 | 2.36e-24 | 99.4 |
| Msa1450030 | MtrunA17_Chr6g0459281 | 29.615 | 260 | 160 | 9 | 74 | 319 | 12 | 262 | 3.26e-24 | 99.4 |
| Msa1450030 | MtrunA17_Chr6g0459331 | 29.434 | 265 | 164 | 8 | 68 | 318 | 6 | 261 | 1.95e-23 | 97.1 |
| Msa1450030 | MtrunA17_Chr7g0266891 | 29.804 | 255 | 164 | 8 | 73 | 318 | 5 | 253 | 2.08e-23 | 97.1 |
| Msa1450030 | MtrunA17_Chr3g0133421 | 83.673 | 49 | 8 | 0 | 1 | 49 | 1 | 49 | 5.69e-23 | 92.0 |
| Msa1450030 | MtrunA17_Chr3g0084871 | 31.295 | 278 | 162 | 8 | 61 | 318 | 1 | 269 | 2.81e-22 | 94.4 |
| Msa1450030 | MtrunA17_Chr3g0124471 | 32.124 | 193 | 124 | 3 | 73 | 264 | 24 | 210 | 1.40e-21 | 92.8 |
| Msa1450030 | MtrunA17_Chr7g0239451 | 29.435 | 248 | 158 | 6 | 81 | 317 | 22 | 263 | 2.62e-21 | 91.3 |
| Msa1450030 | MtrunA17_Chr2g0324021 | 27.519 | 258 | 166 | 9 | 73 | 318 | 4 | 252 | 8.78e-21 | 90.1 |
| Msa1450030 | MtrunA17_Chr7g0270451 | 29.297 | 256 | 164 | 8 | 73 | 318 | 4 | 252 | 1.54e-20 | 89.4 |
| Msa1450030 | MtrunA17_Chr4g0040371 | 30.189 | 265 | 159 | 9 | 71 | 318 | 15 | 270 | 2.37e-20 | 89.4 |
| Msa1450030 | MtrunA17_Chr8g0357481 | 27.715 | 267 | 178 | 6 | 67 | 320 | 3 | 267 | 2.56e-20 | 89.4 |
| Msa1450030 | MtrunA17_Chr7g0270441 | 26.820 | 261 | 165 | 10 | 73 | 318 | 4 | 253 | 6.46e-19 | 84.7 |
| Msa1450030 | MtrunA17_Chr7g0239461 | 28.745 | 247 | 113 | 7 | 81 | 318 | 22 | 214 | 3.78e-18 | 81.6 |
| Msa1450030 | MtrunA17_Chr4g0076931 | 32.984 | 191 | 122 | 5 | 80 | 266 | 11 | 199 | 5.23e-18 | 81.6 |
| Msa1450030 | MtrunA17_Chr3g0124481 | 30.058 | 173 | 115 | 2 | 92 | 264 | 29 | 195 | 3.56e-17 | 80.1 |
| Msa1450030 | MtrunA17_Chr4g0054341 | 28.718 | 195 | 124 | 3 | 76 | 264 | 3 | 188 | 3.69e-17 | 80.1 |
| Msa1450030 | MtrunA17_Chr7g0266991 | 29.146 | 199 | 119 | 3 | 72 | 268 | 22 | 200 | 9.65e-17 | 78.2 |
| Msa1450030 | MtrunA17_Chr4g0045041 | 28.641 | 206 | 130 | 6 | 81 | 272 | 10 | 212 | 1.06e-16 | 80.9 |
| Msa1450030 | MtrunA17_Chr7g0267001 | 26.000 | 250 | 160 | 6 | 73 | 317 | 6 | 235 | 1.82e-16 | 77.8 |
| Msa1450030 | MtrunA17_Chr8g0386201 | 26.009 | 223 | 151 | 5 | 73 | 283 | 43 | 263 | 1.94e-16 | 79.0 |
| Msa1450030 | MtrunA17_Chr4g0045061 | 28.780 | 205 | 123 | 7 | 81 | 268 | 10 | 208 | 7.54e-16 | 78.2 |
| Msa1450030 | MtrunA17_Chr8g0381191 | 27.230 | 213 | 140 | 5 | 81 | 283 | 51 | 258 | 2.50e-15 | 75.5 |
| Msa1450030 | MtrunA17_Chr3g0123251 | 30.208 | 192 | 127 | 4 | 81 | 266 | 57 | 247 | 4.81e-15 | 74.7 |
| Msa1450030 | MtrunA17_Chr8g0355281 | 28.879 | 232 | 141 | 9 | 80 | 298 | 74 | 294 | 8.28e-15 | 74.3 |
| Msa1450030 | MtrunA17_Chr4g0033091 | 31.088 | 193 | 125 | 6 | 80 | 266 | 29 | 219 | 1.01e-13 | 70.1 |
| Msa1450030 | MtrunA17_Chr2g0287951 | 32.787 | 183 | 112 | 5 | 80 | 257 | 38 | 214 | 1.47e-13 | 70.5 |
| Msa1450030 | MtrunA17_Chr7g0249571 | 27.979 | 193 | 133 | 5 | 75 | 262 | 38 | 229 | 4.10e-13 | 68.9 |
| Msa1450030 | MtrunA17_Chr4g0044121 | 31.579 | 171 | 101 | 6 | 159 | 318 | 1 | 166 | 1.06e-12 | 65.5 |
| Msa1450030 | MtrunA17_Chr8g0386171 | 27.935 | 247 | 135 | 9 | 73 | 283 | 50 | 289 | 1.61e-12 | 67.4 |
| Msa1450030 | MtrunA17_Chr7g0270471 | 31.081 | 148 | 83 | 6 | 185 | 320 | 3 | 143 | 1.71e-12 | 64.3 |
| Msa1450030 | MtrunA17_Chr6g0463951 | 30.952 | 168 | 106 | 5 | 159 | 318 | 1 | 166 | 3.18e-12 | 64.3 |
| Msa1450030 | MtrunA17_Chr7g0247011 | 22.449 | 245 | 131 | 5 | 81 | 269 | 10 | 251 | 3.82e-12 | 65.9 |
| Msa1450030 | MtrunA17_Chr3g0142651 | 29.457 | 129 | 84 | 2 | 159 | 280 | 1 | 129 | 6.66e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450030 | AT1G24360.1 | 67.085 | 319 | 103 | 1 | 2 | 320 | 3 | 319 | 1.04e-151 | 428 |
| Msa1450030 | AT5G18210.1 | 35.060 | 251 | 151 | 6 | 79 | 319 | 12 | 260 | 2.13e-36 | 132 |
| Msa1450030 | AT5G06060.1 | 35.341 | 249 | 144 | 7 | 81 | 320 | 15 | 255 | 2.41e-34 | 126 |
| Msa1450030 | AT1G62610.4 | 35.878 | 262 | 155 | 9 | 70 | 320 | 14 | 273 | 4.96e-34 | 126 |
| Msa1450030 | AT1G62610.2 | 36.293 | 259 | 152 | 9 | 70 | 317 | 8 | 264 | 5.80e-34 | 125 |
| Msa1450030 | AT3G03980.1 | 34.646 | 254 | 152 | 5 | 79 | 319 | 18 | 270 | 6.03e-34 | 125 |
| Msa1450030 | AT1G62610.1 | 36.293 | 259 | 152 | 9 | 70 | 317 | 9 | 265 | 6.25e-34 | 125 |
| Msa1450030 | AT1G62610.3 | 36.293 | 259 | 152 | 9 | 70 | 317 | 10 | 266 | 6.40e-34 | 125 |
| Msa1450030 | AT5G18210.2 | 35.498 | 231 | 138 | 5 | 79 | 299 | 12 | 241 | 1.15e-33 | 125 |
| Msa1450030 | AT3G04000.1 | 34.375 | 256 | 153 | 6 | 79 | 320 | 18 | 272 | 3.27e-33 | 124 |
| Msa1450030 | AT1G07440.1 | 32.661 | 248 | 163 | 4 | 75 | 320 | 12 | 257 | 3.62e-33 | 123 |
| Msa1450030 | AT1G63380.4 | 35.115 | 262 | 157 | 10 | 70 | 320 | 14 | 273 | 6.32e-33 | 123 |
| Msa1450030 | AT1G63380.1 | 35.115 | 262 | 157 | 10 | 70 | 320 | 12 | 271 | 6.36e-33 | 123 |
| Msa1450030 | AT1G63380.3 | 35.115 | 262 | 157 | 10 | 70 | 320 | 10 | 269 | 7.50e-33 | 123 |
| Msa1450030 | AT1G63380.2 | 35.115 | 262 | 157 | 10 | 70 | 320 | 17 | 276 | 9.13e-33 | 123 |
| Msa1450030 | AT2G29260.1 | 31.535 | 241 | 160 | 4 | 81 | 318 | 74 | 312 | 1.27e-32 | 123 |
| Msa1450030 | AT4G13180.1 | 34.940 | 249 | 153 | 7 | 79 | 320 | 17 | 263 | 1.06e-30 | 117 |
| Msa1450030 | AT2G29150.1 | 32.520 | 246 | 160 | 5 | 75 | 317 | 16 | 258 | 2.75e-30 | 116 |
| Msa1450030 | AT2G30670.1 | 32.510 | 243 | 159 | 4 | 81 | 320 | 13 | 253 | 3.69e-30 | 115 |
| Msa1450030 | AT1G54870.2 | 30.469 | 256 | 166 | 6 | 74 | 320 | 83 | 335 | 4.03e-30 | 117 |
| Msa1450030 | AT1G54870.1 | 30.469 | 256 | 166 | 6 | 74 | 320 | 81 | 333 | 4.22e-30 | 117 |
| Msa1450030 | AT2G29370.1 | 33.333 | 252 | 157 | 7 | 75 | 320 | 16 | 262 | 5.82e-30 | 115 |
| Msa1450030 | AT3G05260.1 | 29.412 | 255 | 169 | 5 | 74 | 320 | 36 | 287 | 7.54e-30 | 115 |
| Msa1450030 | AT3G46170.1 | 33.969 | 262 | 159 | 11 | 70 | 320 | 21 | 279 | 1.57e-29 | 114 |
| Msa1450030 | AT3G55290.2 | 32.830 | 265 | 158 | 11 | 70 | 320 | 12 | 270 | 2.19e-29 | 114 |
| Msa1450030 | AT3G55290.1 | 32.830 | 265 | 158 | 11 | 70 | 320 | 13 | 271 | 2.19e-29 | 114 |
| Msa1450030 | AT2G29340.2 | 32.099 | 243 | 160 | 4 | 81 | 320 | 13 | 253 | 2.43e-29 | 113 |
| Msa1450030 | AT3G55310.1 | 33.588 | 262 | 160 | 11 | 70 | 320 | 12 | 270 | 3.79e-29 | 113 |
| Msa1450030 | AT2G29340.1 | 32.099 | 243 | 160 | 4 | 81 | 320 | 13 | 253 | 4.57e-29 | 113 |
| Msa1450030 | AT2G29360.1 | 32.099 | 243 | 160 | 5 | 81 | 320 | 22 | 262 | 6.09e-29 | 112 |
| Msa1450030 | AT3G26770.1 | 29.344 | 259 | 165 | 5 | 73 | 318 | 39 | 292 | 8.14e-28 | 110 |
| Msa1450030 | AT2G29330.1 | 31.687 | 243 | 161 | 4 | 81 | 320 | 13 | 253 | 9.41e-28 | 108 |
| Msa1450030 | AT2G29350.1 | 32.083 | 240 | 157 | 6 | 81 | 317 | 21 | 257 | 1.44e-27 | 108 |
| Msa1450030 | AT2G17845.1 | 33.462 | 260 | 152 | 12 | 74 | 317 | 46 | 300 | 1.56e-27 | 109 |
| Msa1450030 | AT1G52340.1 | 33.208 | 265 | 152 | 7 | 73 | 318 | 16 | 274 | 2.01e-27 | 108 |
| Msa1450030 | AT2G29290.2 | 30.705 | 241 | 162 | 4 | 81 | 318 | 13 | 251 | 4.58e-27 | 107 |
| Msa1450030 | AT2G29310.1 | 31.276 | 243 | 162 | 4 | 81 | 320 | 13 | 253 | 4.67e-27 | 107 |
| Msa1450030 | AT2G29320.1 | 31.429 | 245 | 160 | 6 | 81 | 320 | 19 | 260 | 4.78e-26 | 104 |
| Msa1450030 | AT2G29300.1 | 31.837 | 245 | 159 | 6 | 81 | 320 | 13 | 254 | 1.37e-25 | 103 |
| Msa1450030 | AT2G29300.2 | 32.510 | 243 | 156 | 6 | 81 | 318 | 13 | 252 | 2.07e-25 | 103 |
| Msa1450030 | AT4G03140.1 | 27.799 | 259 | 168 | 6 | 73 | 318 | 76 | 328 | 3.12e-25 | 103 |
| Msa1450030 | AT2G47120.2 | 31.783 | 258 | 153 | 9 | 72 | 317 | 4 | 250 | 3.06e-24 | 99.8 |
| Msa1450030 | AT2G47120.1 | 32.031 | 256 | 151 | 9 | 74 | 317 | 5 | 249 | 3.49e-24 | 99.4 |
| Msa1450030 | AT2G29310.2 | 31.527 | 203 | 135 | 3 | 121 | 320 | 50 | 251 | 8.14e-24 | 98.6 |
| Msa1450030 | AT3G51680.1 | 32.836 | 201 | 123 | 4 | 73 | 264 | 30 | 227 | 1.46e-23 | 98.6 |
| Msa1450030 | AT3G26760.1 | 29.389 | 262 | 163 | 7 | 73 | 318 | 34 | 289 | 2.16e-23 | 98.2 |
| Msa1450030 | AT1G49670.1 | 35.349 | 215 | 116 | 7 | 81 | 280 | 10 | 216 | 2.89e-23 | 100 |
| Msa1450030 | AT1G49670.2 | 35.349 | 215 | 116 | 7 | 81 | 280 | 10 | 216 | 3.11e-23 | 100 |
| Msa1450030 | AT2G29290.1 | 30.047 | 213 | 145 | 3 | 109 | 318 | 23 | 234 | 6.03e-23 | 95.9 |
| Msa1450030 | AT2G29350.3 | 30.660 | 212 | 142 | 5 | 109 | 317 | 10 | 219 | 6.61e-23 | 95.5 |
| Msa1450030 | AT5G65205.1 | 33.684 | 190 | 119 | 3 | 76 | 264 | 7 | 190 | 9.20e-23 | 96.3 |
| Msa1450030 | AT1G07450.1 | 31.621 | 253 | 147 | 7 | 81 | 320 | 14 | 253 | 1.48e-22 | 95.1 |
| Msa1450030 | AT2G29320.2 | 31.414 | 191 | 124 | 5 | 135 | 320 | 54 | 242 | 2.14e-22 | 94.4 |
| Msa1450030 | AT3G42960.1 | 31.439 | 264 | 152 | 7 | 73 | 317 | 6 | 259 | 7.29e-22 | 93.6 |
| Msa1450030 | AT5G10050.1 | 31.579 | 190 | 123 | 3 | 76 | 264 | 6 | 189 | 2.20e-21 | 92.4 |
| Msa1450030 | AT1G10310.1 | 33.333 | 198 | 127 | 5 | 75 | 270 | 15 | 209 | 8.02e-21 | 90.1 |
| Msa1450030 | AT3G29260.1 | 29.804 | 255 | 161 | 7 | 73 | 317 | 4 | 250 | 8.84e-21 | 90.1 |
| Msa1450030 | AT3G47350.2 | 32.821 | 195 | 126 | 5 | 73 | 265 | 42 | 233 | 1.66e-20 | 90.5 |
| Msa1450030 | AT3G47350.1 | 32.821 | 195 | 126 | 5 | 73 | 265 | 42 | 233 | 1.72e-20 | 90.5 |
| Msa1450030 | AT2G47130.1 | 29.020 | 255 | 161 | 8 | 74 | 317 | 5 | 250 | 3.39e-20 | 88.6 |
| Msa1450030 | AT2G47140.1 | 28.235 | 255 | 166 | 7 | 73 | 317 | 4 | 251 | 1.79e-19 | 86.7 |
| Msa1450030 | AT4G05530.1 | 28.800 | 250 | 168 | 7 | 73 | 318 | 7 | 250 | 2.21e-19 | 86.3 |
| Msa1450030 | AT3G12800.1 | 27.237 | 257 | 174 | 5 | 75 | 320 | 10 | 264 | 8.54e-19 | 85.5 |
| Msa1450030 | AT3G29250.2 | 28.077 | 260 | 160 | 8 | 74 | 318 | 5 | 252 | 3.86e-18 | 82.8 |
| Msa1450030 | AT3G47360.1 | 31.884 | 207 | 131 | 6 | 73 | 272 | 43 | 246 | 1.08e-17 | 82.4 |
| Msa1450030 | AT3G29250.1 | 28.352 | 261 | 160 | 8 | 73 | 318 | 42 | 290 | 1.35e-17 | 82.0 |
| Msa1450030 | AT3G29250.3 | 28.077 | 260 | 160 | 8 | 74 | 318 | 41 | 288 | 1.60e-17 | 81.6 |
| Msa1450030 | AT5G50770.1 | 31.282 | 195 | 129 | 5 | 73 | 265 | 43 | 234 | 2.88e-16 | 79.0 |
| Msa1450030 | AT5G50700.1 | 28.947 | 190 | 128 | 6 | 79 | 265 | 49 | 234 | 8.35e-16 | 77.4 |
| Msa1450030 | AT5G50600.1 | 28.947 | 190 | 128 | 6 | 79 | 265 | 49 | 234 | 8.35e-16 | 77.4 |
| Msa1450030 | AT2G29350.2 | 30.151 | 199 | 131 | 5 | 81 | 277 | 21 | 213 | 2.65e-15 | 74.3 |
| Msa1450030 | AT3G06060.1 | 34.574 | 188 | 112 | 6 | 75 | 257 | 37 | 218 | 3.26e-15 | 75.5 |
| Msa1450030 | AT3G06060.2 | 34.574 | 188 | 112 | 6 | 75 | 257 | 54 | 235 | 3.48e-15 | 75.5 |
| Msa1450030 | AT5G19200.1 | 34.973 | 183 | 108 | 5 | 80 | 257 | 40 | 216 | 4.97e-15 | 75.1 |
| Msa1450030 | AT1G24470.1 | 28.205 | 195 | 129 | 6 | 81 | 268 | 56 | 246 | 8.41e-15 | 74.3 |
| Msa1450030 | AT1G67730.1 | 33.854 | 192 | 118 | 7 | 81 | 265 | 55 | 244 | 1.43e-14 | 73.6 |
| Msa1450030 | AT5G50590.2 | 30.366 | 191 | 126 | 6 | 73 | 260 | 43 | 229 | 2.20e-14 | 72.0 |
| Msa1450030 | AT5G50690.2 | 30.366 | 191 | 126 | 6 | 73 | 260 | 43 | 229 | 2.20e-14 | 72.0 |
| Msa1450030 | AT3G03330.1 | 29.268 | 205 | 120 | 6 | 73 | 262 | 39 | 233 | 3.95e-14 | 72.4 |
| Msa1450030 | AT5G50590.1 | 30.366 | 191 | 126 | 6 | 73 | 260 | 43 | 229 | 8.66e-14 | 71.2 |
| Msa1450030 | AT5G50690.1 | 30.366 | 191 | 126 | 6 | 73 | 260 | 43 | 229 | 8.66e-14 | 71.2 |
| Msa1450030 | AT4G10020.1 | 28.054 | 221 | 143 | 7 | 48 | 265 | 29 | 236 | 5.15e-13 | 69.7 |
| Msa1450030 | AT2G29340.3 | 26.702 | 191 | 138 | 2 | 81 | 270 | 13 | 202 | 1.98e-12 | 65.9 |
| Msa1450030 | AT2G29340.4 | 26.702 | 191 | 138 | 2 | 81 | 270 | 13 | 202 | 1.98e-12 | 65.9 |
| Msa1450030 | AT5G04900.1 | 25.087 | 287 | 178 | 11 | 1 | 264 | 1 | 273 | 3.44e-12 | 67.0 |
| Msa1450030 | AT2G29310.3 | 26.344 | 186 | 135 | 2 | 81 | 265 | 13 | 197 | 2.80e-11 | 62.4 |
Find 99 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGTCGTGTTAGCAAAAT+AGG | 0.205410 | tig0032775:-1642 | Msa1450030:three_prime_UTR |
| ATTTGGATGAACTGTGATTT+AGG | 0.268514 | tig0032775:+1785 | Msa1450030:intergenic |
| AATCATCTGCGTCCTGTTTC+CGG | 0.282070 | tig0032775:-5747 | Msa1450030:CDS |
| TGCTGGATTAGTGGAATTCT+TGG | 0.283631 | tig0032775:-2201 | Msa1450030:CDS |
| GGTTGAGTTAAACGAAATAT+TGG | 0.295744 | tig0032775:+5710 | Msa1450030:intergenic |
| TCATCAGTTGTTGGTTTGAT+TGG | 0.305542 | tig0032775:-2603 | Msa1450030:CDS |
| GCTGCAAAAGCAGGAGTAAT+TGG | 0.309144 | tig0032775:-2555 | Msa1450030:CDS |
| CTCAAGGTCATTTCCTAACT+TGG | 0.314108 | tig0032775:+2363 | Msa1450030:intergenic |
| CCTAGATGTTCTTTGCTAGT+AGG | 0.324392 | tig0032775:-1571 | Msa1450030:three_prime_UTR |
| ACAGCAATGGCTTCTCTTAC+CGG | 0.335931 | tig0032775:-5858 | Msa1450030:exon |
| GGAAACCTCTTCAGCTTCCT+TGG | 0.347864 | tig0032775:+4525 | Msa1450030:intergenic |
| TCATTTCATTTCATTTCCTC+TGG | 0.350340 | tig0032775:-5904 | Msa1450030:five_prime_UTR |
| ACTAATCCAGCAACTTCTTC+TGG | 0.371540 | tig0032775:+2212 | Msa1450030:intergenic |
| ACGTTGAATTTAGGACGATA+TGG | 0.382624 | tig0032775:-2239 | Msa1450030:intron |
| TGTTCTTTGCTAGTAGGAAC+TGG | 0.384204 | tig0032775:-1565 | Msa1450030:three_prime_UTR |
| AGAAATAGTTGAAAACCATT+TGG | 0.386208 | tig0032775:+1768 | Msa1450030:intergenic |
| AATATTTCGTTTAACTCAAC+CGG | 0.391775 | tig0032775:-5708 | Msa1450030:intron |
| AAAGCAATTGCGTTAGCGTT+AGG | 0.392256 | tig0032775:-5497 | Msa1450030:CDS |
| CAGGTTAATGCTGTTGCTCC+AGG | 0.394323 | tig0032775:-2409 | Msa1450030:CDS |
| TTCCACTTTCTGAACTGCTT+CGG | 0.396378 | tig0032775:+5562 | Msa1450030:intergenic |
| TCGCCGGTTGTGATTGTTAC+CGG | 0.401377 | tig0032775:-5539 | Msa1450030:CDS |
| ATCAATATTTCATCAGTTGT+TGG | 0.404399 | tig0032775:-2612 | Msa1450030:CDS |
| TTTGTAGGCAGTAGATGCTT+GGG | 0.417671 | tig0032775:-3238 | Msa1450030:intron |
| TCTGACATGACTGCCAAGTT+AGG | 0.421559 | tig0032775:-2376 | Msa1450030:CDS |
| GGAACGGAGAGCGACGCAAT+TGG | 0.440016 | tig0032775:+5833 | Msa1450030:intergenic |
| GTTGGTTTGATTGGCAATGC+TGG | 0.445619 | tig0032775:-2594 | Msa1450030:CDS |
| AGAAGAAGTTGCTGGATTAG+TGG | 0.457509 | tig0032775:-2210 | Msa1450030:CDS |
| TCTCATCAATAAACCATCTC+TGG | 0.460320 | tig0032775:+3102 | Msa1450030:intergenic |
| TCCGATACCTCTGGAAGCTC+CGG | 0.461105 | tig0032775:+5520 | Msa1450030:intergenic |
| ATTTGTAGGCAGTAGATGCT+TGG | 0.464311 | tig0032775:-3239 | Msa1450030:intron |
| TAAATCACAGTTCATCCAAA+TGG | 0.467738 | tig0032775:-1783 | Msa1450030:three_prime_UTR |
| AATTATGCTGCTGCAAAAGC+AGG | 0.487568 | tig0032775:-2564 | Msa1450030:CDS |
| CTAGTTTGAAGACCGGAAAC+AGG | 0.488153 | tig0032775:+5735 | Msa1450030:intergenic |
| GGCCAACCAGAAGAAGTTGC+TGG | 0.489361 | tig0032775:-2218 | Msa1450030:CDS |
| CAAGCTGCCAGCTACATCAC+TGG | 0.490614 | tig0032775:-2170 | Msa1450030:CDS |
| CCTACTAGCAAAGAACATCT+AGG | 0.490661 | tig0032775:+1571 | Msa1450030:intergenic |
| CGTTGTGTTTGTTAGTACTT+TGG | 0.494267 | tig0032775:+5961 | Msa1450030:intergenic |
| TGTTAGTACTTTGGAAGCTC+CGG | 0.497080 | tig0032775:+5970 | Msa1450030:intergenic |
| TTTCACCATTGATGGAGGTA+TGG | 0.499842 | tig0032775:-1854 | Msa1450030:CDS |
| CATCACCATACCTCCATCAA+TGG | 0.506907 | tig0032775:+1849 | Msa1450030:intergenic |
| GAAATGAAGAGAAGAGAGGA+TGG | 0.509610 | tig0032775:+5920 | Msa1450030:intergenic |
| GGAAGCTGAAGAGGTTTCCA+AGG | 0.510390 | tig0032775:-4521 | Msa1450030:CDS |
| TTTCATGAATATGCTCAACT+AGG | 0.510501 | tig0032775:+1680 | Msa1450030:intergenic |
| TTTCTCTTTCAAAACAGCAA+TGG | 0.512327 | tig0032775:-5871 | Msa1450030:exon |
| GTGTAGGAGCTCAAATTGCT+AGG | 0.513133 | tig0032775:+1807 | Msa1450030:intergenic |
| GCGTTAGCGTTAGGTAAAGC+AGG | 0.516336 | tig0032775:-5488 | Msa1450030:CDS |
| ATGTCAGATGCAATGAATCC+TGG | 0.521848 | tig0032775:+2391 | Msa1450030:intergenic |
| AATGAAGAAGTCTCAGTGGC+AGG | 0.522699 | tig0032775:-3080 | Msa1450030:CDS |
| GGTGGGCAAGCTCTAACATA+TGG | 0.524116 | tig0032775:-3373 | Msa1450030:CDS |
| ACCGGAGCTTCCAGAGGTAT+CGG | 0.526611 | tig0032775:-5521 | Msa1450030:CDS |
| GAGAGCGACGCAATTGGATC+CGG | 0.528319 | tig0032775:+5839 | Msa1450030:intergenic |
| ATTGGATCTAGTTTGAAGAC+CGG | 0.529069 | tig0032775:+5728 | Msa1450030:intergenic |
| ATCCAGCAACTTCTTCTGGT+TGG | 0.533238 | tig0032775:+2216 | Msa1450030:intergenic |
| GGTTGCTACACTGGCGGACG+CGG | 0.533600 | tig0032775:-5588 | Msa1450030:CDS |
| GATTATGATGAAGAATAAGA+AGG | 0.545866 | tig0032775:-2914 | Msa1450030:intron |
| GTGAGAATGTTGTTATTGAG+TGG | 0.546998 | tig0032775:+5996 | Msa1450030:intergenic |
| GTTATTGATCTAAATCTCAC+TGG | 0.551796 | tig0032775:-3055 | Msa1450030:CDS |
| GCTCCGGTAACAATCACAAC+CGG | 0.558097 | tig0032775:+5536 | Msa1450030:intergenic |
| GAGAGCACAGGTTGCTACAC+TGG | 0.559959 | tig0032775:-5597 | Msa1450030:CDS |
| TGCCAGCTACATCACTGGGC+AGG | 0.563723 | tig0032775:-2165 | Msa1450030:intron |
| GATTGAGAAGTGGAGAGTAA+TGG | 0.569836 | tig0032775:+5766 | Msa1450030:intergenic |
| ATTGTTTATCAATACATCAA+CGG | 0.570986 | tig0032775:+3212 | Msa1450030:intergenic |
| ATCATCCAAGGAAGCTGAAG+AGG | 0.573441 | tig0032775:-4530 | Msa1450030:CDS |
| GTTATAGGAATAACCAGAGA+TGG | 0.573576 | tig0032775:-3115 | Msa1450030:intron |
| CCTGACAAAATCTGTTGCAA+AGG | 0.574173 | tig0032775:-2532 | Msa1450030:CDS |
| GAGCATATTCATGAAATCAA+AGG | 0.577527 | tig0032775:-1673 | Msa1450030:three_prime_UTR |
| GAGTGTTGTGTAGTCTCAGT+AGG | 0.582036 | tig0032775:+6039 | Msa1450030:intergenic |
| TGTAGGAGCTCAAATTGCTA+GGG | 0.582898 | tig0032775:+1808 | Msa1450030:intergenic |
| AACCGAAGCAGTTCAGAAAG+TGG | 0.583413 | tig0032775:-5564 | Msa1450030:CDS |
| GATGTATTGATAAACAATGC+CGG | 0.584295 | tig0032775:-3207 | Msa1450030:intron |
| AAATGAAATGAAGAGAAGAG+AGG | 0.590934 | tig0032775:+5916 | Msa1450030:intergenic |
| AGTTCAGAAAGTGGAATCGC+CGG | 0.598878 | tig0032775:-5555 | Msa1450030:CDS |
| GTTAGGTAAAGCAGGTTGCA+AGG | 0.599628 | tig0032775:-5480 | Msa1450030:intron |
| TGTAGATTGAAGCACTCGGT+GGG | 0.599744 | tig0032775:-3390 | Msa1450030:intron |
| CTAGCAAAGAACATCTAGGA+AGG | 0.604066 | tig0032775:+1575 | Msa1450030:intergenic |
| CTTCAAAATATTCACCTGTG+TGG | 0.605776 | tig0032775:+3021 | Msa1450030:intergenic |
| CAACTATGCAAGATCATCCA+AGG | 0.609283 | tig0032775:-4542 | Msa1450030:CDS |
| ACCGGCGGCGGCAAAAGTGA+CGG | 0.609458 | tig0032775:+5812 | Msa1450030:intergenic |
| GGGCAAGCTCTAACATATGG+TGG | 0.611395 | tig0032775:-3370 | Msa1450030:CDS |
| GGACGCAGATGATTGAGAAG+TGG | 0.616684 | tig0032775:+5756 | Msa1450030:intergenic |
| ATGAACTGTGATTTAGGTGT+AGG | 0.620376 | tig0032775:+1791 | Msa1450030:intergenic |
| GAGAAAATGGAAGAAGCCAG+AGG | 0.621180 | tig0032775:+5888 | Msa1450030:intergenic |
| TTGTAGATTGAAGCACTCGG+TGG | 0.621839 | tig0032775:-3391 | Msa1450030:intron |
| AAGCTGCCAGCTACATCACT+GGG | 0.623670 | tig0032775:-2169 | Msa1450030:CDS |
| CGGCGGCAAAAGTGACGGAA+CGG | 0.625215 | tig0032775:+5817 | Msa1450030:intergenic |
| GCAAAGGAATATTCTAGCAG+AGG | 0.644543 | tig0032775:-2516 | Msa1450030:CDS |
| TTGTAGGCAGTAGATGCTTG+GGG | 0.648579 | tig0032775:-3237 | Msa1450030:intron |
| ATAACAACATTCTCACACTC+CGG | 0.650450 | tig0032775:-5989 | Msa1450030:five_prime_UTR |
| ATTGTTACCGGAGCTTCCAG+AGG | 0.650765 | tig0032775:-5527 | Msa1450030:CDS |
| GAATGTTGTTATTGAGTGGA+CGG | 0.655046 | tig0032775:+6000 | Msa1450030:intergenic |
| TGAGCTGTGAAGCTTAGCAA+TGG | 0.656875 | tig0032775:+6062 | Msa1450030:intergenic |
| TGAGAAGTGGAGAGTAATGG+CGG | 0.660025 | tig0032775:+5769 | Msa1450030:intergenic |
| AGCTGAAGAGGTTTCCAAGG+AGG | 0.661491 | tig0032775:-4518 | Msa1450030:intron |
| AGCACAGGTTGCTACACTGG+CGG | 0.662783 | tig0032775:-5594 | Msa1450030:CDS |
| TATTTGTAGATTGAAGCACT+CGG | 0.665627 | tig0032775:-3394 | Msa1450030:intron |
| GAAGAAGTCTCAGTGGCAGG+AGG | 0.670136 | tig0032775:-3077 | Msa1450030:CDS |
| GACCTGCCCAGTGATGTAGC+TGG | 0.695510 | tig0032775:+2163 | Msa1450030:intergenic |
| GGATTCTACTATAAATCACA+AGG | 0.706707 | tig0032775:+1701 | Msa1450030:intergenic |
| TGAGAATGAAGAAGTCTCAG+TGG | 0.725436 | tig0032775:-3084 | Msa1450030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACTATTACTCTTTTATTTT+TGG | - | tig0032775:2372-2391 | Msa1450030:CDS | 15.0% |
| !! | ACATTACATATTAAAAGTAA+CGG | + | tig0032775:3168-3187 | Msa1450030:intergenic | 15.0% |
| !! | GGATGAAATTTAATAAATAA+GGG | + | tig0032775:3727-3746 | Msa1450030:intergenic | 15.0% |
| !! | TGGATGAAATTTAATAAATA+AGG | + | tig0032775:3728-3747 | Msa1450030:intergenic | 15.0% |
| !! | AAGCACAATATTAAAAATTA+TGG | + | tig0032775:3923-3942 | Msa1450030:intergenic | 15.0% |
| !! | ATATCAGATTAAAAAGAAAA+GGG | + | tig0032775:4519-4538 | Msa1450030:intergenic | 15.0% |
| !! | AAAAAATTAGAATCAAACTT+TGG | + | tig0032775:4765-4784 | Msa1450030:intergenic | 15.0% |
| !! | TGTATAATGTACTTATAAAA+CGG | + | tig0032775:5379-5398 | Msa1450030:intergenic | 15.0% |
| !!! | CAACATTCATGTTTATTTTT+TGG | - | tig0032775:2074-2093 | Msa1450030:intron | 20.0% |
| !! | TTTGATATTATTGTTACAAG+TGG | - | tig0032775:2791-2810 | Msa1450030:intron | 20.0% |
| !! | CATAAAAACAGAAACATTAA+TGG | + | tig0032775:3044-3063 | Msa1450030:intergenic | 20.0% |
| !! | ATTAGTATAAACTTTAACCA+TGG | + | tig0032775:3084-3103 | Msa1450030:intergenic | 20.0% |
| !! | TATAAGTCTACCAAATATTT+GGG | + | tig0032775:3260-3279 | Msa1450030:intergenic | 20.0% |
| !! | TTATAAGTCTACCAAATATT+TGG | + | tig0032775:3261-3280 | Msa1450030:intergenic | 20.0% |
| !! | CTAAAACTATAATATTGTTG+AGG | + | tig0032775:3311-3330 | Msa1450030:intergenic | 20.0% |
| !!! | ATTAATTGTGTTGATTTCAA+TGG | + | tig0032775:3811-3830 | Msa1450030:intergenic | 20.0% |
| !! | ATTGTTTATCAATACATCAA+CGG | + | tig0032775:4277-4296 | Msa1450030:intergenic | 20.0% |
| !! | CATATCAGATTAAAAAGAAA+AGG | + | tig0032775:4520-4539 | Msa1450030:intergenic | 20.0% |
| !! | ATTTAACAATTGACAATATC+AGG | + | tig0032775:5031-5050 | Msa1450030:intergenic | 20.0% |
| !! | ACAACATCTTCAATAAATTA+CGG | + | tig0032775:5204-5223 | Msa1450030:intergenic | 20.0% |
| ! | AATATTTCGTTTAACTCAAC+CGG | - | tig0032775:1778-1797 | Msa1450030:three_prime_UTR | 25.0% |
| ! | CATTATCAGTTTATGTCTAA+CGG | + | tig0032775:2046-2065 | Msa1450030:intergenic | 25.0% |
| ! | ATCTAAAGAATATGATCTTG+CGG | - | tig0032775:2432-2451 | Msa1450030:intron | 25.0% |
| !!! | TAAATCAACCAGAACTTTTT+TGG | + | tig0032775:2631-2650 | Msa1450030:intergenic | 25.0% |
| !! | ATTATTGTTACAAGTGGTTT+TGG | - | tig0032775:2797-2816 | Msa1450030:intron | 25.0% |
| !! | TACATGCACTTAATATTTTC+AGG | - | tig0032775:2914-2933 | Msa1450030:intron | 25.0% |
| !!! | CACTTAATATTTTCAGGTTT+TGG | - | tig0032775:2920-2939 | Msa1450030:CDS | 25.0% |
| ! | ATAATCACACATATTTCAGA+AGG | + | tig0032775:3004-3023 | Msa1450030:intergenic | 25.0% |
| !! | TTTTATGCCAATCTAATATC+AGG | - | tig0032775:3057-3076 | Msa1450030:CDS | 25.0% |
| ! | ATAAGTCTACCAAATATTTG+GGG | + | tig0032775:3259-3278 | Msa1450030:intergenic | 25.0% |
| ! | ATTTGGTAGACTTATAAAGT+TGG | - | tig0032775:3264-3283 | Msa1450030:intron | 25.0% |
| !!! | ATTCTATGATTTTTTTAGCC+AGG | - | tig0032775:3478-3497 | Msa1450030:intron | 25.0% |
| !!! | TTCTATGATTTTTTTAGCCA+GGG | - | tig0032775:3479-3498 | Msa1450030:intron | 25.0% |
| ! | CACAATTAATGTTAATGACT+TGG | - | tig0032775:3577-3596 | Msa1450030:intron | 25.0% |
| !!! | AAGAGACAATTATTTTGAGA+CGG | + | tig0032775:3628-3647 | Msa1450030:intergenic | 25.0% |
| !! | AATAAATAAGGGCATAATAG+TGG | + | tig0032775:3716-3735 | Msa1450030:intergenic | 25.0% |
| ! | CTCTTATTAATTGTAGTTAG+TGG | + | tig0032775:3762-3781 | Msa1450030:intergenic | 25.0% |
| !!! | AAACGACTATTATTTTGAGA+TGG | - | tig0032775:3859-3878 | Msa1450030:intron | 25.0% |
| !!! | TAGTGTTCATGCTATTTTAT+TGG | - | tig0032775:4036-4055 | Msa1450030:intron | 25.0% |
| ! | TTTATGACTTTCACATTTGT+AGG | - | tig0032775:4233-4252 | Msa1450030:intron | 25.0% |
| ! | ATACTCAAACAAAGATTGTA+TGG | - | tig0032775:4349-4368 | Msa1450030:intron | 25.0% |
| ! | AACAAAGATTGTATGGTTAT+AGG | - | tig0032775:4356-4375 | Msa1450030:intron | 25.0% |
| ! | GATTATGATGAAGAATAAGA+AGG | - | tig0032775:4572-4591 | Msa1450030:intron | 25.0% |
| ! | CCTACAAGAAATCATAAAAT+GGG | + | tig0032775:4624-4643 | Msa1450030:intergenic | 25.0% |
| ! | TCCTACAAGAAATCATAAAA+TGG | + | tig0032775:4625-4644 | Msa1450030:intergenic | 25.0% |
| ! | GGAATAATTAATGACTTGAA+CGG | + | tig0032775:4669-4688 | Msa1450030:intergenic | 25.0% |
| ! | GTCATTAATTATTCCTAAAG+TGG | - | tig0032775:4674-4693 | Msa1450030:intron | 25.0% |
| ! | TTGAGAAAAAATTCCACTTT+AGG | + | tig0032775:4690-4709 | Msa1450030:intergenic | 25.0% |
| ! | AATTCTTATTGTTCCTAGAT+AGG | + | tig0032775:4738-4757 | Msa1450030:intergenic | 25.0% |
| !! | ATACTCTACTTTAGGAATAA+AGG | + | tig0032775:4811-4830 | Msa1450030:intergenic | 25.0% |
| ! | AAAAGTAGATACTCTACTTT+AGG | + | tig0032775:4819-4838 | Msa1450030:intergenic | 25.0% |
| ! | ATCAATATTTCATCAGTTGT+TGG | - | tig0032775:4874-4893 | Msa1450030:intron | 25.0% |
| ! | TATTTCTTGCATTTACCTAA+TGG | + | tig0032775:5170-5189 | Msa1450030:intergenic | 25.0% |
| !!! | ATTTTTTGCACGTTGAATTT+AGG | - | tig0032775:5238-5257 | Msa1450030:intron | 25.0% |
| ! | ATGTAGTTATGATATCCAAA+GGG | + | tig0032775:5429-5448 | Msa1450030:intergenic | 25.0% |
| ! | TATGTAGTTATGATATCCAA+AGG | + | tig0032775:5430-5449 | Msa1450030:intergenic | 25.0% |
| !! | TTTAAGACATGCTCAATTTA+TGG | - | tig0032775:5496-5515 | Msa1450030:CDS | 25.0% |
| ! | AGAAATAGTTGAAAACCATT+TGG | + | tig0032775:5721-5740 | Msa1450030:intergenic | 25.0% |
| !!! | AAATCAAAGGTGTTTTAACA+AGG | - | tig0032775:5826-5845 | Msa1450030:CDS | 25.0% |
| AAATGAAATGAAGAGAAGAG+AGG | + | tig0032775:1573-1592 | Msa1450030:intergenic | 30.0% | |
| TCATTTCATTTCATTTCCTC+TGG | - | tig0032775:1582-1601 | Msa1450030:three_prime_UTR | 30.0% | |
| !!! | TGCTGTTTTGAAAGAGAAAA+TGG | + | tig0032775:1614-1633 | Msa1450030:intergenic | 30.0% |
| TTTCTCTTTCAAAACAGCAA+TGG | - | tig0032775:1615-1634 | Msa1450030:three_prime_UTR | 30.0% | |
| GGTTGAGTTAAACGAAATAT+TGG | + | tig0032775:1779-1798 | Msa1450030:intergenic | 30.0% | |
| ATCGATTACATAAATTGCGA+TGG | + | tig0032775:2200-2219 | Msa1450030:intergenic | 30.0% | |
| GAACATTACATAAATTGCGA+TGG | + | tig0032775:2298-2317 | Msa1450030:intergenic | 30.0% | |
| ATGTAATGTTCATGAATCAC+TGG | - | tig0032775:2307-2326 | Msa1450030:intron | 30.0% | |
| AGATTTCTAACAAGATTACC+AGG | + | tig0032775:2471-2490 | Msa1450030:intergenic | 30.0% | |
| AATTTCTGACAGAAATTTGG+GGG | + | tig0032775:2513-2532 | Msa1450030:intergenic | 30.0% | |
| CAATTTCTGACAGAAATTTG+GGG | + | tig0032775:2514-2533 | Msa1450030:intergenic | 30.0% | |
| CCAATTTCTGACAGAAATTT+GGG | + | tig0032775:2515-2534 | Msa1450030:intergenic | 30.0% | |
| CAATAGTTAGAATTCCTTGT+AGG | - | tig0032775:2535-2554 | Msa1450030:CDS | 30.0% | |
| !!! | CAGAACTTTTTTGGAAATGA+AGG | + | tig0032775:2622-2641 | Msa1450030:intergenic | 30.0% |
| CTTCATTTCCAAAAAAGTTC+TGG | - | tig0032775:2620-2639 | Msa1450030:CDS | 30.0% | |
| ! | TGCTGTAAATGTAATGCTTT+TGG | - | tig0032775:2876-2895 | Msa1450030:intron | 30.0% |
| CATAGAATGATCAACATCTT+TGG | + | tig0032775:3466-3485 | Msa1450030:intergenic | 30.0% | |
| TTTATCAATTTCACCTCAAC+TGG | + | tig0032775:3551-3570 | Msa1450030:intergenic | 30.0% | |
| AAGTTTGTGCACGATATTTA+AGG | + | tig0032775:3839-3858 | Msa1450030:intergenic | 30.0% | |
| !!! | GACTATTATTTTGAGATGGA+GGG | - | tig0032775:3863-3882 | Msa1450030:intron | 30.0% |
| ATGTTATATTGATGCATGCT+TGG | - | tig0032775:3974-3993 | Msa1450030:intron | 30.0% | |
| ! | TATTTGTAGATTGAAGCACT+CGG | - | tig0032775:4092-4111 | Msa1450030:intron | 30.0% |
| ! | GATGTATTGATAAACAATGC+CGG | - | tig0032775:4279-4298 | Msa1450030:intron | 30.0% |
| ! | ACAAGATCTTTTCAACTTAC+CGG | + | tig0032775:4301-4320 | Msa1450030:intergenic | 30.0% |
| ! | CAATCTTTGTTTGAGTATGA+GGG | + | tig0032775:4347-4366 | Msa1450030:intergenic | 30.0% |
| ! | ACAATCTTTGTTTGAGTATG+AGG | + | tig0032775:4348-4367 | Msa1450030:intergenic | 30.0% |
| GTTATTGATCTAAATCTCAC+TGG | - | tig0032775:4431-4450 | Msa1450030:intron | 30.0% | |
| !!! | GAGACTGTTAATTTTTTTGC+AGG | - | tig0032775:4539-4558 | Msa1450030:CDS | 30.0% |
| !!! | ACTGTTAATTTTTTTGCAGG+CGG | - | tig0032775:4542-4561 | Msa1450030:CDS | 30.0% |
| CAAGAAATCATAAAATGGGA+AGG | + | tig0032775:4620-4639 | Msa1450030:intergenic | 30.0% | |
| ! | CCCATTTTATGATTTCTTGT+AGG | - | tig0032775:4621-4640 | Msa1450030:intron | 30.0% |
| !! | AGGATTTGTTGAGAAATTAG+AGG | + | tig0032775:4718-4737 | Msa1450030:intergenic | 30.0% |
| TTTCTCAACAAATCCTATCT+AGG | - | tig0032775:4722-4741 | Msa1450030:intron | 30.0% | |
| !! | AGAGTATCTACTTTTAAACG+TGG | - | tig0032775:4824-4843 | Msa1450030:intron | 30.0% |
| !!! | TGGATGCTTGTATTTTTTCA+GGG | - | tig0032775:4844-4863 | Msa1450030:intron | 30.0% |
| ! | TGACCTTGAGAAAAAGATTT+TGG | - | tig0032775:5136-5155 | Msa1450030:intron | 30.0% |
| CGTGCAAAAAATAAGTTAAG+CGG | + | tig0032775:5230-5249 | Msa1450030:intergenic | 30.0% | |
| TATAACTTACAAACACCCTT+TGG | - | tig0032775:5411-5430 | Msa1450030:intron | 30.0% | |
| ATTTCAGAGTTTCGATAAGT+TGG | + | tig0032775:5477-5496 | Msa1450030:intergenic | 30.0% | |
| ATAAAGAACCCTAACATGAT+AGG | + | tig0032775:5540-5559 | Msa1450030:intergenic | 30.0% | |
| ATAAGCAGAAAAAGAAACAC+TGG | + | tig0032775:5571-5590 | Msa1450030:intergenic | 30.0% | |
| ATTTGGATGAACTGTGATTT+AGG | + | tig0032775:5704-5723 | Msa1450030:intergenic | 30.0% | |
| TAAATCACAGTTCATCCAAA+TGG | - | tig0032775:5703-5722 | Msa1450030:intron | 30.0% | |
| GGATTCTACTATAAATCACA+AGG | + | tig0032775:5788-5807 | Msa1450030:intergenic | 30.0% | |
| TTTCATGAATATGCTCAACT+AGG | + | tig0032775:5809-5828 | Msa1450030:intergenic | 30.0% | |
| GAGCATATTCATGAAATCAA+AGG | - | tig0032775:5813-5832 | Msa1450030:CDS | 30.0% | |
| ! | GAATGTTGTTATTGAGTGGA+CGG | + | tig0032775:1489-1508 | Msa0961320:intergenic | 35.0% |
| ! | GTGAGAATGTTGTTATTGAG+TGG | + | tig0032775:1493-1512 | Msa0961320:intergenic | 35.0% |
| ATAACAACATTCTCACACTC+CGG | - | tig0032775:1497-1516 | Msa1450030:three_prime_UTR | 35.0% | |
| ! | CGTTGTGTTTGTTAGTACTT+TGG | + | tig0032775:1528-1547 | Msa1450030:intergenic | 35.0% |
| ! | ATTGGATCTAGTTTGAAGAC+CGG | + | tig0032775:1761-1780 | Msa1450030:intergenic | 35.0% |
| ! | GAAGAATTGAAGAAGAGTAC+CGG | + | tig0032775:1800-1819 | Msa1450030:intergenic | 35.0% |
| TGCGGTAATAATGAAATTCC+TGG | - | tig0032775:2450-2469 | Msa1450030:intron | 35.0% | |
| CCCAAATTTCTGTCAGAAAT+TGG | - | tig0032775:2512-2531 | Msa1450030:CDS | 35.0% | |
| GCCAATTTCTGACAGAAATT+TGG | + | tig0032775:2516-2535 | Msa1450030:intergenic | 35.0% | |
| TCATTGCAAGGACTAAAAGA+CGG | + | tig0032775:2838-2857 | Msa1450030:intergenic | 35.0% | |
| ACAACTCTGATTTCATTGCA+AGG | + | tig0032775:2850-2869 | Msa1450030:intergenic | 35.0% | |
| TTCATTCTGCCCCAAATATT+TGG | - | tig0032775:3247-3266 | Msa1450030:intron | 35.0% | |
| TGGTAGACTTATAAAGTTGG+TGG | - | tig0032775:3267-3286 | Msa1450030:intron | 35.0% | |
| AATGATCAACATCTTTGGCT+GGG | + | tig0032775:3461-3480 | Msa1450030:intergenic | 35.0% | |
| !!! | TTTTTTTAGCCAGGGTTTCA+TGG | - | tig0032775:3487-3506 | Msa1450030:intron | 35.0% |
| TGTTCTTTCTTTACCAGTTG+AGG | - | tig0032775:3535-3554 | Msa1450030:intron | 35.0% | |
| !!! | GACAATTATTTTGAGACGGA+GGG | + | tig0032775:3624-3643 | Msa1450030:intergenic | 35.0% |
| !!! | AGACAATTATTTTGAGACGG+AGG | + | tig0032775:3625-3644 | Msa1450030:intergenic | 35.0% |
| !!! | CGACTATTATTTTGAGATGG+AGG | - | tig0032775:3862-3881 | Msa1450030:intron | 35.0% |
| TGAAAGTCATAAAGCAGCAA+AGG | + | tig0032775:4226-4245 | Msa1450030:intergenic | 35.0% | |
| AGTATGAGGGAAGATAGAAA+GGG | + | tig0032775:4334-4353 | Msa1450030:intergenic | 35.0% | |
| GTTATAGGAATAACCAGAGA+TGG | - | tig0032775:4371-4390 | Msa1450030:intron | 35.0% | |
| TCTCATCAATAAACCATCTC+TGG | + | tig0032775:4387-4406 | Msa1450030:intergenic | 35.0% | |
| CTTCAAAATATTCACCTGTG+TGG | + | tig0032775:4468-4487 | Msa1450030:intergenic | 35.0% | |
| TTCTTGTAGGAGTCCTATTT+AGG | - | tig0032775:4634-4653 | Msa1450030:intron | 35.0% | |
| !!! | GTGGATGCTTGTATTTTTTC+AGG | - | tig0032775:4843-4862 | Msa1450030:intron | 35.0% |
| !!! | TGCTTGTATTTTTTCAGGGA+AGG | - | tig0032775:4848-4867 | Msa1450030:intron | 35.0% |
| !! | TCATCAGTTGTTGGTTTGAT+TGG | - | tig0032775:4883-4902 | Msa1450030:intron | 35.0% |
| TTAACCTGGCAAGAAAAACA+GGG | + | tig0032775:5065-5084 | Msa1450030:intergenic | 35.0% | |
| ATTAACCTGGCAAGAAAAAC+AGG | + | tig0032775:5066-5085 | Msa1450030:intergenic | 35.0% | |
| ! | CCTCCAAAATCTTTTTCTCA+AGG | + | tig0032775:5142-5161 | Msa1450030:intergenic | 35.0% |
| ! | CCTTGAGAAAAAGATTTTGG+AGG | - | tig0032775:5139-5158 | Msa1450030:intron | 35.0% |
| !! | ATTTTGGAGGCAATTCCATT+AGG | - | tig0032775:5152-5171 | Msa1450030:intron | 35.0% |
| ! | ACGTTGAATTTAGGACGATA+TGG | - | tig0032775:5247-5266 | Msa1450030:intron | 35.0% |
| AGACATGCTCAATTTATGGT+TGG | - | tig0032775:5500-5519 | Msa1450030:CDS | 35.0% | |
| ATCATCTGTCCTATCATGTT+AGG | - | tig0032775:5528-5547 | Msa1450030:CDS | 35.0% | |
| TCATCTGTCCTATCATGTTA+GGG | - | tig0032775:5529-5548 | Msa1450030:CDS | 35.0% | |
| TACTATAATTACCGTGTTGC+AGG | - | tig0032775:5608-5627 | Msa1450030:intron | 35.0% | |
| ATGAACTGTGATTTAGGTGT+AGG | + | tig0032775:5698-5717 | Msa1450030:intergenic | 35.0% | |
| !! | ATTATATTTTCTGGCCTCTG+AGG | - | tig0032775:5877-5896 | Msa1450030:five_prime_UTR | 35.0% |
| AGGAAAAAACTAAACCTCAG+AGG | + | tig0032775:5894-5913 | Msa1450030:intergenic | 35.0% | |
| ! | CTGTCAAAGCTAAGTTTTTG+TGG | - | tig0032775:5989-6008 | Msa1450030:five_prime_UTR | 35.0% |
| ! | TGTTAGTACTTTGGAAGCTC+CGG | + | tig0032775:1519-1538 | Msa1450030:intergenic | 40.0% |
| GAAATGAAGAGAAGAGAGGA+TGG | + | tig0032775:1569-1588 | Msa1450030:intergenic | 40.0% | |
| ! | CTGAGTGATTTTACGGTTAC+CGG | + | tig0032775:1695-1714 | Msa1450030:intergenic | 40.0% |
| GATTGAGAAGTGGAGAGTAA+TGG | + | tig0032775:1723-1742 | Msa1450030:intergenic | 40.0% | |
| TTCCACTTTCTGAACTGCTT+CGG | + | tig0032775:1927-1946 | Msa1450030:intergenic | 40.0% | |
| !! | AATTGCTTTTCCGATACCTC+TGG | + | tig0032775:1978-1997 | Msa1450030:intergenic | 40.0% |
| AAAGCAATTGCGTTAGCGTT+AGG | - | tig0032775:1989-2008 | Msa1450030:intron | 40.0% | |
| ! | TTTTCCTCTTCATACGTAGC+AGG | - | tig0032775:2172-2191 | Msa1450030:CDS | 40.0% |
| ! | TTTTCCTCTTCATACGTAGC+AGG | - | tig0032775:2172-2191 | Msa1450030:CDS | 40.0% |
| GCGAGTTAAAAAATGTGCGT+TGG | - | tig0032775:2340-2359 | Msa1450030:CDS | 40.0% | |
| ! | TGCTTTTGGATCCTGATGTT+CGG | - | tig0032775:2890-2909 | Msa1450030:intron | 40.0% |
| CAACTATGCAAGATCATCCA+AGG | - | tig0032775:2944-2963 | Msa1450030:intron | 40.0% | |
| CCATGGTCCTGATATTAGAT+TGG | + | tig0032775:3067-3086 | Msa1450030:intergenic | 40.0% | |
| CCAATCTAATATCAGGACCA+TGG | - | tig0032775:3064-3083 | Msa1450030:CDS | 40.0% | |
| GAATGATCAACATCTTTGGC+TGG | + | tig0032775:3462-3481 | Msa1450030:intergenic | 40.0% | |
| AATAGAAGACCATGAAACCC+TGG | + | tig0032775:3499-3518 | Msa1450030:intergenic | 40.0% | |
| AGTTAGTGGAGTAGTCAAGT+TGG | + | tig0032775:3748-3767 | Msa1450030:intergenic | 40.0% | |
| ! | TTTACAGCAGTAGTTCTGTG+TGG | - | tig0032775:3941-3960 | Msa1450030:intron | 40.0% |
| ATTTGTAGGCAGTAGATGCT+TGG | - | tig0032775:4247-4266 | Msa1450030:intron | 40.0% | |
| TTTGTAGGCAGTAGATGCTT+GGG | - | tig0032775:4248-4267 | Msa1450030:intron | 40.0% | |
| GAGTATGAGGGAAGATAGAA+AGG | + | tig0032775:4335-4354 | Msa1450030:intergenic | 40.0% | |
| TGAGAATGAAGAAGTCTCAG+TGG | - | tig0032775:4402-4421 | Msa1450030:intron | 40.0% | |
| ! | TGGTGTTTTTCTTTCCACAC+AGG | - | tig0032775:4451-4470 | Msa1450030:intron | 40.0% |
| GGAGTCCTATTTAGGAACAA+TGG | - | tig0032775:4642-4661 | Msa1450030:intron | 40.0% | |
| ACGGTCCATTGTTCCTAAAT+AGG | + | tig0032775:4650-4669 | Msa1450030:intergenic | 40.0% | |
| ! | TGCTTTTGCAGCAGCATAAT+TGG | + | tig0032775:4923-4942 | Msa1450030:intergenic | 40.0% |
| AATTATGCTGCTGCAAAAGC+AGG | - | tig0032775:4922-4941 | Msa1450030:intron | 40.0% | |
| ! | CCTTTGCAACAGATTTTGTC+AGG | + | tig0032775:4957-4976 | Msa1450030:intergenic | 40.0% |
| CCTGACAAAATCTGTTGCAA+AGG | - | tig0032775:4954-4973 | Msa1450030:intron | 40.0% | |
| GCAAAGGAATATTCTAGCAG+AGG | - | tig0032775:4970-4989 | Msa1450030:intron | 40.0% | |
| !! | AAAACCCTGTTTTTCTTGCC+AGG | - | tig0032775:5058-5077 | Msa1450030:intron | 40.0% |
| ATGTCAGATGCAATGAATCC+TGG | + | tig0032775:5098-5117 | Msa1450030:intergenic | 40.0% | |
| CTCAAGGTCATTTCCTAACT+TGG | + | tig0032775:5126-5145 | Msa1450030:intergenic | 40.0% | |
| ACTAATCCAGCAACTTCTTC+TGG | + | tig0032775:5277-5296 | Msa1450030:intergenic | 40.0% | |
| ! | AGAAGAAGTTGCTGGATTAG+TGG | - | tig0032775:5276-5295 | Msa1450030:intron | 40.0% |
| !! | TGCTGGATTAGTGGAATTCT+TGG | - | tig0032775:5285-5304 | Msa1450030:intron | 40.0% |
| ! | TCAGAGTTTCGATAAGTTGG+CGG | + | tig0032775:5474-5493 | Msa1450030:intergenic | 40.0% |
| AATGGTGAAAACCTGCAACA+CGG | + | tig0032775:5622-5641 | Msa1450030:intergenic | 40.0% | |
| ! | TTGCAGGTTTTCACCATTGA+TGG | - | tig0032775:5624-5643 | Msa1450030:intron | 40.0% |
| TTTCACCATTGATGGAGGTA+TGG | - | tig0032775:5632-5651 | Msa1450030:intron | 40.0% | |
| TGTAGGAGCTCAAATTGCTA+GGG | + | tig0032775:5681-5700 | Msa1450030:intergenic | 40.0% | |
| CAAGGTCGTGTTAGCAAAAT+AGG | - | tig0032775:5844-5863 | Msa1450030:CDS | 40.0% | |
| CTAGCAAAGAACATCTAGGA+AGG | + | tig0032775:5914-5933 | Msa1450030:intergenic | 40.0% | |
| CCTACTAGCAAAGAACATCT+AGG | + | tig0032775:5918-5937 | Msa1450030:intergenic | 40.0% | |
| CCTAGATGTTCTTTGCTAGT+AGG | - | tig0032775:5915-5934 | Msa1450030:five_prime_UTR | 40.0% | |
| TGTTCTTTGCTAGTAGGAAC+TGG | - | tig0032775:5921-5940 | Msa1450030:five_prime_UTR | 40.0% | |
| TGAGCTGTGAAGCTTAGCAA+TGG | + | tig0032775:1427-1446 | Msa0961320:intergenic | 45.0% | |
| ! | GAGTGTTGTGTAGTCTCAGT+AGG | + | tig0032775:1450-1469 | Msa0961320:intergenic | 45.0% |
| GAGAAAATGGAAGAAGCCAG+AGG | + | tig0032775:1601-1620 | Msa1450030:intergenic | 45.0% | |
| ACAGCAATGGCTTCTCTTAC+CGG | - | tig0032775:1628-1647 | Msa1450030:three_prime_UTR | 45.0% | |
| ! | AGTGATTTTACGGTTACCGG+CGG | + | tig0032775:1692-1711 | Msa1450030:intergenic | 45.0% |
| ! | GGCGGATCTGAGTGATTTTA+CGG | + | tig0032775:1702-1721 | Msa1450030:intergenic | 45.0% |
| TGAGAAGTGGAGAGTAATGG+CGG | + | tig0032775:1720-1739 | Msa1450030:intergenic | 45.0% | |
| AATCATCTGCGTCCTGTTTC+CGG | - | tig0032775:1739-1758 | Msa1450030:three_prime_UTR | 45.0% | |
| CTAGTTTGAAGACCGGAAAC+AGG | + | tig0032775:1754-1773 | Msa1450030:intergenic | 45.0% | |
| AACCGAAGCAGTTCAGAAAG+TGG | - | tig0032775:1922-1941 | Msa1450030:intron | 45.0% | |
| AGTTCAGAAAGTGGAATCGC+CGG | - | tig0032775:1931-1950 | Msa1450030:intron | 45.0% | |
| GTTAGGTAAAGCAGGTTGCA+AGG | - | tig0032775:2006-2025 | Msa1450030:intron | 45.0% | |
| AGGAGAGCTACAAACCTACA+AGG | + | tig0032775:2552-2571 | Msa1450030:intergenic | 45.0% | |
| GTAGGTTTGTAGCTCTCCTT+AGG | - | tig0032775:2553-2572 | Msa1450030:CDS | 45.0% | |
| TGACAACCAAACTGAGCCTA+AGG | + | tig0032775:2572-2591 | Msa1450030:intergenic | 45.0% | |
| AGTGCATGTAACCGAACATC+AGG | + | tig0032775:2904-2923 | Msa1450030:intergenic | 45.0% | |
| ATCATCCAAGGAAGCTGAAG+AGG | - | tig0032775:2956-2975 | Msa1450030:intron | 45.0% | |
| ! | AAGGCAGTTTTCTACCTCCT+TGG | + | tig0032775:2985-3004 | Msa1450030:intergenic | 45.0% |
| ACTTGACACTCCTTGTTCCT+GGG | + | tig0032775:3362-3381 | Msa1450030:intergenic | 45.0% | |
| AACATCTTTGGCTGGGAATC+AGG | + | tig0032775:3454-3473 | Msa1450030:intergenic | 45.0% | |
| ! | TTGTAGATTGAAGCACTCGG+TGG | - | tig0032775:4095-4114 | Msa1450030:intron | 45.0% |
| ! | TGTAGATTGAAGCACTCGGT+GGG | - | tig0032775:4096-4115 | Msa1450030:intron | 45.0% |
| TTGTAGGCAGTAGATGCTTG+GGG | - | tig0032775:4249-4268 | Msa1450030:intron | 45.0% | |
| AATGAAGAAGTCTCAGTGGC+AGG | - | tig0032775:4406-4425 | Msa1450030:intron | 45.0% | |
| !! | GTTGGTTTGATTGGCAATGC+TGG | - | tig0032775:4892-4911 | Msa1450030:intron | 45.0% |
| GCTGCAAAAGCAGGAGTAAT+TGG | - | tig0032775:4931-4950 | Msa1450030:intron | 45.0% | |
| TCTGACATGACTGCCAAGTT+AGG | - | tig0032775:5110-5129 | Msa1450030:intron | 45.0% | |
| ATCCAGCAACTTCTTCTGGT+TGG | + | tig0032775:5273-5292 | Msa1450030:intergenic | 45.0% | |
| ! | CAGGTTTTCACCATTGATGG+AGG | - | tig0032775:5627-5646 | Msa1450030:intron | 45.0% |
| CATCACCATACCTCCATCAA+TGG | + | tig0032775:5640-5659 | Msa1450030:intergenic | 45.0% | |
| GTGTAGGAGCTCAAATTGCT+AGG | + | tig0032775:5682-5701 | Msa1450030:intergenic | 45.0% | |
| !!! | AATAATATTATTATATTTTC+TGG | - | tig0032775:5868-5887 | Msa1450030:exon | 5.0% |
| GGACGCAGATGATTGAGAAG+TGG | + | tig0032775:1733-1752 | Msa1450030:intergenic | 50.0% | |
| ! | ATTCGAGAACGCGCGTTTTC+AGG | - | tig0032775:1863-1882 | Msa1450030:intron | 50.0% |
| !!! | GTTTTCAGGTGTGAGAGCAC+AGG | - | tig0032775:1877-1896 | Msa1450030:intron | 50.0% |
| ! | TCGCCGGTTGTGATTGTTAC+CGG | - | tig0032775:1947-1966 | Msa1450030:intron | 50.0% |
| GCTCCGGTAACAATCACAAC+CGG | + | tig0032775:1953-1972 | Msa1450030:intergenic | 50.0% | |
| ATTGTTACCGGAGCTTCCAG+AGG | - | tig0032775:1959-1978 | Msa1450030:intron | 50.0% | |
| GCGTTAGCGTTAGGTAAAGC+AGG | - | tig0032775:1998-2017 | Msa1450030:intron | 50.0% | |
| AGCTCTCCTTAGGCTCAGTT+TGG | - | tig0032775:2563-2582 | Msa1450030:CDS | 50.0% | |
| GGAAACCTCTTCAGCTTCCT+TGG | + | tig0032775:2964-2983 | Msa1450030:intergenic | 50.0% | |
| GGAAGCTGAAGAGGTTTCCA+AGG | - | tig0032775:2965-2984 | Msa1450030:intron | 50.0% | |
| AGCTGAAGAGGTTTCCAAGG+AGG | - | tig0032775:2968-2987 | Msa1450030:intron | 50.0% | |
| ! | CTTCGATAAGTTTTCCCCCC+AGG | - | tig0032775:3342-3361 | Msa1450030:CDS | 50.0% |
| ! | AAGTTTTCCCCCCAGGAACA+AGG | - | tig0032775:3349-3368 | Msa1450030:CDS | 50.0% |
| TTGACACTCCTTGTTCCTGG+GGG | + | tig0032775:3360-3379 | Msa1450030:intergenic | 50.0% | |
| CTTGACACTCCTTGTTCCTG+GGG | + | tig0032775:3361-3380 | Msa1450030:intergenic | 50.0% | |
| CACTTGACACTCCTTGTTCC+TGG | + | tig0032775:3363-3382 | Msa1450030:intergenic | 50.0% | |
| ! | GGTGGGCAAGCTCTAACATA+TGG | - | tig0032775:4113-4132 | Msa1450030:intron | 50.0% |
| ! | GGGCAAGCTCTAACATATGG+TGG | - | tig0032775:4116-4135 | Msa1450030:intron | 50.0% |
| CTGGAGCAACAGCATTAACC+TGG | + | tig0032775:5079-5098 | Msa1450030:intergenic | 50.0% | |
| CAGGTTAATGCTGTTGCTCC+AGG | - | tig0032775:5077-5096 | Msa1450030:intron | 50.0% | |
| AAGCTGCCAGCTACATCACT+GGG | - | tig0032775:5317-5336 | Msa1450030:intron | 50.0% | |
| GAGAGCGACGCAATTGGATC+CGG | + | tig0032775:1650-1669 | Msa1450030:intergenic | 55.0% | |
| ! | GATTTTACGGTTACCGGCGG+CGG | + | tig0032775:1689-1708 | Msa1450030:intergenic | 55.0% |
| ! | GAGAGCACAGGTTGCTACAC+TGG | - | tig0032775:1889-1908 | Msa1450030:intron | 55.0% |
| AGCACAGGTTGCTACACTGG+CGG | - | tig0032775:1892-1911 | Msa1450030:intron | 55.0% | |
| ! | ACCGGAGCTTCCAGAGGTAT+CGG | - | tig0032775:1965-1984 | Msa1450030:intron | 55.0% |
| ! | TCCGATACCTCTGGAAGCTC+CGG | + | tig0032775:1969-1988 | Msa1450030:intergenic | 55.0% |
| GGAGCCTGCTACGTATGAAG+AGG | + | tig0032775:2179-2198 | Msa1450030:intergenic | 55.0% | |
| GGAGCCTGCTACGTATGAAG+AGG | + | tig0032775:2179-2198 | Msa1450030:intergenic | 55.0% | |
| TGACACTCCTTGTTCCTGGG+GGG | + | tig0032775:3359-3378 | Msa1450030:intergenic | 55.0% | |
| GAAGAAGTCTCAGTGGCAGG+AGG | - | tig0032775:4409-4428 | Msa1450030:intron | 55.0% | |
| GGCCAACCAGAAGAAGTTGC+TGG | - | tig0032775:5268-5287 | Msa1450030:intron | 55.0% | |
| CAAGCTGCCAGCTACATCAC+TGG | - | tig0032775:5316-5335 | Msa1450030:intron | 55.0% | |
| GGAACGGAGAGCGACGCAAT+TGG | + | tig0032775:1656-1675 | Msa1450030:intergenic | 60.0% | |
| ! | CGGCGGCAAAAGTGACGGAA+CGG | + | tig0032775:1672-1691 | Msa1450030:intergenic | 60.0% |
| TGCCAGCTACATCACTGGGC+AGG | - | tig0032775:5321-5340 | Msa1450030:intron | 60.0% | |
| GACCTGCCCAGTGATGTAGC+TGG | + | tig0032775:5326-5345 | Msa1450030:intergenic | 60.0% | |
| !!! | TCCGTCACTTTTGCCGCCGC+CGG | - | tig0032775:1673-1692 | Msa1450030:three_prime_UTR | 65.0% |
| ACCGGCGGCGGCAAAAGTGA+CGG | + | tig0032775:1677-1696 | Msa1450030:intergenic | 65.0% | |
| ! | GGTTGCTACACTGGCGGACG+CGG | - | tig0032775:1898-1917 | Msa1450030:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0032775 | gene | 1420 | 6088 | 1420 | ID=Msa1450030;Name=Msa1450030 |
| tig0032775 | mRNA | 1420 | 6088 | 1420 | ID=Msa1450030-mRNA-1;Parent=Msa1450030;Name=Msa1450030-mRNA-1;_AED=0.05;_eAED=0.05;_QI=214|1|1|1|1|1|11|426|320 |
| tig0032775 | exon | 1420 | 1878 | 1420 | ID=Msa1450030-mRNA-1:exon:17254;Parent=Msa1450030-mRNA-1 |
| tig0032775 | exon | 2166 | 2248 | 2166 | ID=Msa1450030-mRNA-1:exon:17253;Parent=Msa1450030-mRNA-1 |
| tig0032775 | exon | 2335 | 2428 | 2335 | ID=Msa1450030-mRNA-1:exon:17252;Parent=Msa1450030-mRNA-1 |
| tig0032775 | exon | 2509 | 2643 | 2509 | ID=Msa1450030-mRNA-1:exon:17251;Parent=Msa1450030-mRNA-1 |
| tig0032775 | exon | 2915 | 2947 | 2915 | ID=Msa1450030-mRNA-1:exon:17250;Parent=Msa1450030-mRNA-1 |
| tig0032775 | exon | 3036 | 3130 | 3036 | ID=Msa1450030-mRNA-1:exon:17249;Parent=Msa1450030-mRNA-1 |
| tig0032775 | exon | 3208 | 3253 | 3208 | ID=Msa1450030-mRNA-1:exon:17248;Parent=Msa1450030-mRNA-1 |
| tig0032775 | exon | 3327 | 3407 | 3327 | ID=Msa1450030-mRNA-1:exon:17247;Parent=Msa1450030-mRNA-1 |
| tig0032775 | exon | 4519 | 4572 | 4519 | ID=Msa1450030-mRNA-1:exon:17246;Parent=Msa1450030-mRNA-1 |
| tig0032775 | exon | 5481 | 5623 | 5481 | ID=Msa1450030-mRNA-1:exon:17245;Parent=Msa1450030-mRNA-1 |
| tig0032775 | exon | 5709 | 6088 | 5709 | ID=Msa1450030-mRNA-1:exon:17244;Parent=Msa1450030-mRNA-1 |
| tig0032775 | five_prime_UTR | 5875 | 6088 | 5875 | ID=Msa1450030-mRNA-1:five_prime_utr;Parent=Msa1450030-mRNA-1 |
| tig0032775 | CDS | 5709 | 5874 | 5709 | ID=Msa1450030-mRNA-1:cds;Parent=Msa1450030-mRNA-1 |
| tig0032775 | CDS | 5481 | 5623 | 5481 | ID=Msa1450030-mRNA-1:cds;Parent=Msa1450030-mRNA-1 |
| tig0032775 | CDS | 4519 | 4572 | 4519 | ID=Msa1450030-mRNA-1:cds;Parent=Msa1450030-mRNA-1 |
| tig0032775 | CDS | 3327 | 3407 | 3327 | ID=Msa1450030-mRNA-1:cds;Parent=Msa1450030-mRNA-1 |
| tig0032775 | CDS | 3208 | 3253 | 3208 | ID=Msa1450030-mRNA-1:cds;Parent=Msa1450030-mRNA-1 |
| tig0032775 | CDS | 3036 | 3130 | 3036 | ID=Msa1450030-mRNA-1:cds;Parent=Msa1450030-mRNA-1 |
| tig0032775 | CDS | 2915 | 2947 | 2915 | ID=Msa1450030-mRNA-1:cds;Parent=Msa1450030-mRNA-1 |
| tig0032775 | CDS | 2509 | 2643 | 2509 | ID=Msa1450030-mRNA-1:cds;Parent=Msa1450030-mRNA-1 |
| tig0032775 | CDS | 2335 | 2428 | 2335 | ID=Msa1450030-mRNA-1:cds;Parent=Msa1450030-mRNA-1 |
| tig0032775 | CDS | 2166 | 2248 | 2166 | ID=Msa1450030-mRNA-1:cds;Parent=Msa1450030-mRNA-1 |
| tig0032775 | CDS | 1846 | 1878 | 1846 | ID=Msa1450030-mRNA-1:cds;Parent=Msa1450030-mRNA-1 |
| tig0032775 | three_prime_UTR | 1420 | 1845 | 1420 | ID=Msa1450030-mRNA-1:three_prime_utr;Parent=Msa1450030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
