AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0625810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0625810 MtrunA17_Chr4g0001371 95.616 365 16 0 1 365 1 365 0.0 640
Msa0625810 MtrunA17_Chr4g0073991 53.061 392 135 12 2 365 4 374 5.66e-126 367
Msa0625810 MtrunA17_Chr3g0141411 61.497 187 71 1 137 322 128 314 1.89e-87 267
Msa0625810 MtrunA17_Chr5g0420791 54.545 187 85 0 137 323 112 298 2.09e-79 245
Msa0625810 MtrunA17_Chr8g0366071 50.000 190 92 1 137 323 116 305 3.56e-70 222
Msa0625810 MtrunA17_Chr2g0309681 38.408 289 171 3 40 324 101 386 6.26e-69 221
Msa0625810 MtrunA17_Chr8g0356301 49.215 191 95 1 134 324 192 380 1.10e-68 220
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0625810 AT5G57970.1 52.661 357 124 9 1 326 1 343 6.42e-119 348
Msa0625810 AT5G57970.2 52.661 357 124 9 1 326 1 343 6.42e-119 348
Msa0625810 AT1G80850.1 51.327 339 130 6 1 323 1 320 4.57e-106 315
Msa0625810 AT1G15970.1 48.986 345 138 5 1 322 1 330 6.17e-104 310
Msa0625810 AT1G15970.2 48.986 345 138 5 1 322 1 330 6.17e-104 310
Msa0625810 AT1G75090.1 55.825 206 87 2 137 342 119 320 4.16e-85 261
Msa0625810 AT1G13635.2 42.041 245 132 2 82 323 64 301 6.37e-72 227
Msa0625810 AT1G13635.1 42.041 245 132 2 82 323 64 301 6.37e-72 227
Msa0625810 AT3G12710.1 46.277 188 99 1 137 324 122 307 3.07e-63 204
Msa0625810 AT5G44680.1 47.090 189 98 1 134 322 161 347 7.55e-61 199

Find 155 sgRNAs with CRISPR-Local

Find 446 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCAACAACTATGACTATT+TGG 0.243784 4_3:+5159202 None:intergenic
AAGAATTACCAAAGTCAATT+TGG 0.248023 4_3:+5159253 None:intergenic
AACCCTTTATTCTTCTTTCT+AGG 0.278572 4_3:-5165141 Msa0625810:five_prime_UTR
TTACTTATGAATTCTGCTTT+TGG 0.286769 4_3:+5159857 None:intergenic
CTCTCGTGGCCCACCATTCT+TGG 0.287227 4_3:-5160661 Msa0625810:CDS
AACCCTAGAAAGAAGAATAA+AGG 0.290005 4_3:+5165138 None:intergenic
CTGGTAGTTGTTAGGGAAGT+TGG 0.290242 4_3:-5159345 Msa0625810:three_prime_UTR
ATGAGGTAAGTGTGTGAAAA+AGG 0.293202 4_3:+5165198 None:intergenic
AATGAGCTGGCAGGACTTCC+AGG 0.294778 4_3:+5160363 None:intergenic
TTATTAATCTGGTAGTTGTT+AGG 0.302907 4_3:-5159353 Msa0625810:three_prime_UTR
CGAAGTTAATCTAAGGAAAA+AGG 0.308074 4_3:+5159171 None:intergenic
TTTGAGTTGCTCAGCTTCTC+TGG 0.308230 4_3:-5160697 Msa0625810:CDS
TGGCTATGTTGTTATTAATC+TGG 0.329538 4_3:-5159364 Msa0625810:three_prime_UTR
AGAAGAAAATTCTAGAATCT+AGG 0.334698 4_3:-5164960 Msa0625810:five_prime_UTR
TTGGCAAAAGGCAGTTATTT+CGG 0.344300 4_3:-5160642 Msa0625810:intron
GGTGAGAAAGTTGGAGTTGC+AGG 0.346237 4_3:+5165263 None:intergenic
AATTTCAACTGCAGGGGATC+AGG 0.353298 4_3:-5159424 Msa0625810:three_prime_UTR
CGGGATCATTGTGGGGTGGC+GGG 0.361427 4_3:-5164758 Msa0625810:CDS
CCTGGCGCGGGTACCGGAAT+TGG 0.362822 4_3:+5159894 None:intergenic
GGAATGAAGATACCTGTATT+TGG 0.366975 4_3:+5164500 None:intergenic
TGCTTCTGTTGAGGTGGAAT+CGG 0.374873 4_3:-5164564 Msa0625810:CDS
GCGGGATCATTGTGGGGTGG+CGG 0.378453 4_3:-5164759 Msa0625810:CDS
CTCCTTGACCTTAGAGTTGA+GGG 0.381707 4_3:+5159679 None:intergenic
ATTCAAATACAACTGCCTTC+TGG 0.382917 4_3:+5159277 None:intergenic
GTTGAGGTGGAATCGGTTGA+TGG 0.388009 4_3:-5164557 Msa0625810:CDS
GAAGAAGCAGGTTGGTTTGA+AGG 0.397868 4_3:-5164624 Msa0625810:CDS
AATGCGTCGAAGTTAATCTA+AGG 0.403580 4_3:+5159164 None:intergenic
TGCTTCATCGACGGATTCTT+CGG 0.404006 4_3:-5164696 Msa0625810:CDS
AGCCTATAGTCAGCCAATTC+CGG 0.406531 4_3:-5159907 Msa0625810:CDS
TCCTCCAACAGTGACATTCA+TGG 0.407744 4_3:+5164904 None:intergenic
TGCTTTGTGTTGTGTGATTG+TGG 0.412859 4_3:+5165235 None:intergenic
CTAACAAATGACCACCTTAT+CGG 0.413811 4_3:-5159764 Msa0625810:CDS
TGGTAGTTGTTAGGGAAGTT+GGG 0.414418 4_3:-5159344 Msa0625810:three_prime_UTR
TTCACTCACTCATATCTGTA+TGG 0.417370 4_3:+5159304 None:intergenic
GGTTTCTTCACCGTCTTCAC+AGG 0.418186 4_3:+5164857 None:intergenic
TATCGGTTGCTTCAGATTCA+AGG 0.418187 4_3:-5159747 Msa0625810:CDS
GACATTCATGGATCGAACTC+TGG 0.418188 4_3:+5164916 None:intergenic
TCCGTTTCTGGCGTCAGCGC+CGG 0.420103 4_3:+5164836 None:intergenic
TGCAGGTAATAGAAGAGTTC+GGG 0.420760 4_3:-5159967 Msa0625810:intron
GGTCCTTTGACAGCTACATT+TGG 0.426585 4_3:-5159946 Msa0625810:CDS
GAGCAGCTCCCTCAACTCTA+AGG 0.427071 4_3:-5159687 Msa0625810:CDS
GCTCAGCTTCTCTGGAGCCT+TGG 0.428503 4_3:-5160689 Msa0625810:CDS
TTTGAATACCAAATTGACTT+TGG 0.429244 4_3:-5159261 Msa0625810:three_prime_UTR
CAGGTACCTGGCGCGGGTAC+CGG 0.429776 4_3:+5159888 None:intergenic
TTTACACTGTCAACAAATCA+AGG 0.429855 4_3:-5159126 Msa0625810:three_prime_UTR
CAAAGCGGCGGGATCATTGT+GGG 0.432697 4_3:-5164766 Msa0625810:CDS
GGTGGAATCGGTTGATGGCT+TGG 0.438456 4_3:-5164552 Msa0625810:CDS
ATGCAGGTAATAGAAGAGTT+CGG 0.439690 4_3:-5159968 Msa0625810:intron
ACCCTTTATTCTTCTTTCTA+GGG 0.439886 4_3:-5165140 Msa0625810:five_prime_UTR
TATTAATCTGGTAGTTGTTA+GGG 0.440322 4_3:-5159352 Msa0625810:three_prime_UTR
TTTGCCGTCTGCTTCTGCAT+TGG 0.440436 4_3:+5159712 None:intergenic
CAGCTTCTCTGGAGCCTTGG+CGG 0.440685 4_3:-5160686 Msa0625810:CDS
ACCCTAGAAAGAAGAATAAA+GGG 0.442965 4_3:+5165139 None:intergenic
ACTTATTACCACGATGGCCT+TGG 0.446388 4_3:-5159393 Msa0625810:three_prime_UTR
TACCGGAATTGGCTGACTAT+AGG 0.451878 4_3:+5159905 None:intergenic
TTTCTCATTCATTCTTGAAA+CGG 0.452366 4_3:+5160398 None:intergenic
ACATACTTATCATCATGAAT+AGG 0.454068 4_3:+5160814 None:intergenic
GGGATCATTGTGGGGTGGCG+GGG 0.458837 4_3:-5164757 Msa0625810:CDS
TTGGAGATTTGGCAGGTACC+TGG 0.462486 4_3:+5159876 None:intergenic
CTGTAGGAAATTTCAACTGC+AGG 0.463981 4_3:-5159432 Msa0625810:three_prime_UTR
ACCTCGTAAAGAGAGGATTC+AGG 0.467770 4_3:-5159832 Msa0625810:CDS
TGGGAAGGTGGCGAGGCGTG+TGG 0.468356 4_3:-5164648 Msa0625810:CDS
GGGAAGGTGGCGAGGCGTGT+GGG 0.468839 4_3:-5164647 Msa0625810:CDS
CCAATTCCGGTACCCGCGCC+AGG 0.472079 4_3:-5159894 Msa0625810:CDS
TACACTTTCATGCAAGTGGC+TGG 0.473323 4_3:-5159788 Msa0625810:CDS
TCAAAGCGGCGGGATCATTG+TGG 0.474584 4_3:-5164767 Msa0625810:CDS
CACGATGGCCTTGGTTACAT+TGG 0.478016 4_3:-5159384 Msa0625810:three_prime_UTR
GAAGAAAATTCTAGAATCTA+GGG 0.478395 4_3:-5164959 Msa0625810:five_prime_UTR
CTTCACAGGGCGAACCGCCT+TGG 0.480011 4_3:+5164871 None:intergenic
GGCCCACCATTCTTGGCAAA+AGG 0.484731 4_3:-5160654 Msa0625810:CDS
AGGGCAAGAAAAGGTGTGCT+TGG 0.485088 4_3:-5164529 Msa0625810:CDS
GCCGGTGGTTTCAAAGCGGC+GGG 0.485521 4_3:-5164777 Msa0625810:CDS
ACCGGCGCTGACGCCAGAAA+CGG 0.485963 4_3:-5164837 Msa0625810:CDS
TGTGAAGACGGTGAAGAAAC+CGG 0.488013 4_3:-5164855 Msa0625810:CDS
CGCCGGTGGTTTCAAAGCGG+CGG 0.488097 4_3:-5164778 Msa0625810:CDS
AGTTGTTAGGGAAGTTGGGT+AGG 0.490609 4_3:-5159340 Msa0625810:three_prime_UTR
TGCTGTTCCTGCTTCTGTTG+AGG 0.493180 4_3:-5164573 Msa0625810:CDS
ATTTGGCAGGTACCTGGCGC+GGG 0.495432 4_3:+5159882 None:intergenic
GGGCAAGAAAAGGTGTGCTT+GGG 0.504932 4_3:-5164528 Msa0625810:CDS
AACAACAGACTGACATTGGT+TGG 0.508916 4_3:+5159641 None:intergenic
GTGGAGTGTGGTGAGAAAGT+TGG 0.509200 4_3:+5165254 None:intergenic
GGCGGTTCGCCCTGTGAAGA+CGG 0.513216 4_3:-5164867 Msa0625810:CDS
GATTCTTCGGCTTGTAGTAG+TGG 0.516385 4_3:-5164683 Msa0625810:CDS
TGTTGTGTGATTGTGGAGTG+TGG 0.516927 4_3:+5165242 None:intergenic
GGAATCGGTTGATGGCTTGG+AGG 0.518370 4_3:-5164549 Msa0625810:CDS
AAATAATTCTCACAGTTCAA+TGG 0.521918 4_3:-5159056 Msa0625810:three_prime_UTR
TGAATCTGAAGCAACCGATA+AGG 0.522161 4_3:+5159750 None:intergenic
GAGGCGTGTGGGGAAGAAGC+AGG 0.526699 4_3:-5164636 Msa0625810:CDS
GGTTGGTTTGAAGGTTGAGA+AGG 0.527194 4_3:-5164615 Msa0625810:CDS
TCCATGAATGTCACTGTTGG+AGG 0.529107 4_3:-5164905 Msa0625810:CDS
ATTTCAACTGCAGGGGATCA+GGG 0.531399 4_3:-5159423 Msa0625810:three_prime_UTR
GGAAGGTGGCGAGGCGTGTG+GGG 0.535981 4_3:-5164646 Msa0625810:CDS
GATGAATGCTTCGTGTTCGT+CGG 0.539358 4_3:-5164720 Msa0625810:CDS
AAATGCACGTCAGATGTGTA+AGG 0.541389 4_3:-5160307 Msa0625810:intron
AAGGCCATCGTGGTAATAAG+TGG 0.541812 4_3:+5159395 None:intergenic
GAATCGGTTGATGGCTTGGA+GGG 0.542348 4_3:-5164548 Msa0625810:CDS
GAGCCTTGGCGGAACTCTCG+TGG 0.547535 4_3:-5160675 Msa0625810:CDS
TGTAGGAAATTTCAACTGCA+GGG 0.548537 4_3:-5159431 Msa0625810:three_prime_UTR
AACAGATTCGCTGCAGTATG+TGG 0.549612 4_3:-5159585 Msa0625810:three_prime_UTR
ATGGCTTGGAGGGCAAGAAA+AGG 0.550290 4_3:-5164538 Msa0625810:CDS
TCTCCTTGACCTTAGAGTTG+AGG 0.551920 4_3:+5159678 None:intergenic
TTCATTCTTGAAACGGCACA+TGG 0.552021 4_3:+5160405 None:intergenic
GAGTTCTGACAACAATGAGC+TGG 0.554796 4_3:+5160350 None:intergenic
ACATTCATGGATCGAACTCT+GGG 0.554917 4_3:+5164917 None:intergenic
TGTTCCTGCTTCTGTTGAGG+TGG 0.555906 4_3:-5164570 Msa0625810:CDS
CGATCCATGAATGTCACTGT+TGG 0.558361 4_3:-5164908 Msa0625810:CDS
CTCCCTCAACTCTAAGGTCA+AGG 0.560939 4_3:-5159681 Msa0625810:CDS
GTTCCAAATGTAGCTGTCAA+AGG 0.561616 4_3:+5159943 None:intergenic
TGGTGCTTCGTCGAGTGGGA+AGG 0.564647 4_3:-5164663 Msa0625810:CDS
GATTCCACCTCAACAGAAGC+AGG 0.564993 4_3:+5164566 None:intergenic
AACTATACAATCTTGATCAA+CGG 0.567941 4_3:+5159540 None:intergenic
TGGAGGAGATTCTGATTCCA+AGG 0.572176 4_3:-5164888 Msa0625810:CDS
CATCTACACTTTCATGCAAG+TGG 0.572752 4_3:-5159792 Msa0625810:CDS
AGTAGTGGTGCTTCGTCGAG+TGG 0.573054 4_3:-5164668 Msa0625810:CDS
TGCTTCGTCGAGTGGGAAGG+TGG 0.575190 4_3:-5164660 Msa0625810:CDS
GTTTCTTCACCGTCTTCACA+GGG 0.576121 4_3:+5164858 None:intergenic
CGTCGAGTGGGAAGGTGGCG+AGG 0.576833 4_3:-5164655 Msa0625810:CDS
TCTGACAACAATGAGCTGGC+AGG 0.577866 4_3:+5160354 None:intergenic
GCTTGGGTTACACCAAATAC+AGG 0.577939 4_3:-5164512 Msa0625810:intron
GCTCATTGTTGTCAGAACTC+AGG 0.583785 4_3:-5160347 Msa0625810:CDS
AGATAACAACAGACTGACAT+TGG 0.585213 4_3:+5159637 None:intergenic
GATTTGGCAGGTACCTGGCG+CGG 0.587303 4_3:+5159881 None:intergenic
TCCCGCCGCTTTGAAACCAC+CGG 0.591202 4_3:+5164776 None:intergenic
ATGTGTGGTGGTTACGCCGG+TGG 0.592067 4_3:-5164792 Msa0625810:CDS
GTAGTGGTGCTTCGTCGAGT+GGG 0.599496 4_3:-5164667 Msa0625810:CDS
TTCGTCGGATGCTTCATCGA+CGG 0.600016 4_3:-5164705 Msa0625810:CDS
AAGAGAGGATTCAGGAGCGT+GGG 0.601130 4_3:-5159824 Msa0625810:CDS
AAAGCGGCGGGATCATTGTG+GGG 0.601498 4_3:-5164765 Msa0625810:CDS
TTCTCCAATGCAGAAGCAGA+CGG 0.602716 4_3:-5159716 Msa0625810:CDS
GGTCAAGGAGAAGTCAAATG+AGG 0.608561 4_3:-5159666 Msa0625810:CDS
CGTGTGGGGAAGAAGCAGGT+TGG 0.610013 4_3:-5164632 Msa0625810:CDS
GTGAGAAAGTTGGAGTTGCA+GGG 0.615716 4_3:+5165264 None:intergenic
CTATTGACTACGGTTACTGT+AGG 0.616699 4_3:-5159448 Msa0625810:intron
AAAGAGAGGATTCAGGAGCG+TGG 0.617225 4_3:-5159825 Msa0625810:CDS
AGTAAAGACCTCGTAAAGAG+AGG 0.620812 4_3:-5159839 Msa0625810:CDS
ATCTGAAGCAACCGATAAGG+TGG 0.624426 4_3:+5159753 None:intergenic
GGGCCACGAGAGTTCCGCCA+AGG 0.627368 4_3:+5160672 None:intergenic
TCCTCCACTTATTACCACGA+TGG 0.628485 4_3:-5159399 Msa0625810:three_prime_UTR
GCGGCGGGATCATTGTGGGG+TGG 0.632466 4_3:-5164762 Msa0625810:CDS
AACTTTGCCGCAATGTGTGG+TGG 0.635175 4_3:-5164804 Msa0625810:CDS
GCAATGTGTGGTGGTTACGC+CGG 0.638351 4_3:-5164795 Msa0625810:CDS
GTAGGAAATTTCAACTGCAG+GGG 0.639655 4_3:-5159430 Msa0625810:three_prime_UTR
TCGTGAAAAGCAATATAACA+TGG 0.643369 4_3:+5160853 None:intergenic
GAAAACTTTGCCGCAATGTG+TGG 0.647587 4_3:-5164807 Msa0625810:CDS
GAGTGAGTGAAATAGCCAGA+AGG 0.649119 4_3:-5159292 Msa0625810:three_prime_UTR
CTAACTTAAACGTCATACAA+AGG 0.650546 4_3:+5159099 None:intergenic
GCCATCGTGGTAATAAGTGG+AGG 0.654142 4_3:+5159398 None:intergenic
TCCTGAATCCTCTCTTTACG+AGG 0.657037 4_3:+5159831 None:intergenic
TTCATGGATCGAACTCTGGG+TGG 0.660267 4_3:+5164920 None:intergenic
CAACATAGCCAATGTAACCA+AGG 0.663996 4_3:+5159376 None:intergenic
GGCGTAACCACCACACATTG+CGG 0.680670 4_3:+5164797 None:intergenic
CAATGTAACCAAGGCCATCG+TGG 0.702102 4_3:+5159385 None:intergenic
ATGAAAGTGTAGATGACTGT+CGG 0.713201 4_3:+5159800 None:intergenic
AGGAGATTCTGATTCCAAGG+CGG 0.731855 4_3:-5164885 Msa0625810:CDS
TTACGCCGGTGGTTTCAAAG+CGG 0.754631 4_3:-5164781 Msa0625810:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACTAATCAATAATTAATA+AGG - chr4_3:5160848-5160867 Msa0625810:CDS 10.0%
!! AATAATTAATAAGGATAATT+TGG - chr4_3:5160857-5160876 Msa0625810:CDS 10.0%
!! TACTATTTATGAAAATTTAA+TGG + chr4_3:5161693-5161712 None:intergenic 10.0%
!! TACTATTTATGAAAATTTAA+TGG + chr4_3:5161693-5161712 None:intergenic 10.0%
!! ATAATTTATCCAATTATTAT+TGG + chr4_3:5162228-5162247 None:intergenic 10.0%
!!! TTACTTTTAATGTAATTGTA+CGG - chr4_3:5159876-5159895 Msa0625810:CDS 15.0%
!!! TTAATAACCATTTTATTGTT+TGG - chr4_3:5160620-5160639 Msa0625810:intron 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG + chr4_3:5160731-5160750 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr4_3:5160834-5160853 None:intergenic 15.0%
!!! TTTATTTGGTTAAATTGTTT+TGG + chr4_3:5161102-5161121 None:intergenic 15.0%
!!! GGTTTTAAATCTTTTTTATT+TGG + chr4_3:5161116-5161135 None:intergenic 15.0%
!!! TGAATTTTTTTTAGTAAATG+AGG + chr4_3:5162182-5162201 None:intergenic 15.0%
!! ACATTTATACCAATAATAAT+TGG - chr4_3:5162216-5162235 Msa0625810:intron 15.0%
!! TTAAATTTCGAAAAAGAAAA+TGG - chr4_3:5162753-5162772 Msa0625810:intron 15.0%
!! TTCTGTGATATATAATTATA+CGG - chr4_3:5163689-5163708 Msa0625810:intron 15.0%
!!! TAATTCAAAGCTAATTTTTA+GGG + chr4_3:5163822-5163841 None:intergenic 15.0%
!!! TTAATTCAAAGCTAATTTTT+AGG + chr4_3:5163823-5163842 None:intergenic 15.0%
!!! AAAAATTAGCTTTGAATTAA+TGG - chr4_3:5163823-5163842 Msa0625810:intron 15.0%
!! TATTAAGCTGAAAAAAAATG+AGG + chr4_3:5159118-5159137 None:intergenic 20.0%
!!! AAAACTCGAAATTTTCAATT+GGG - chr4_3:5159280-5159299 Msa0625810:three_prime_UTR 20.0%
!! ATCACAAATCACAATATTAT+AGG + chr4_3:5159839-5159858 None:intergenic 20.0%
!!! AATATTGTGATTTGTGATAT+TGG - chr4_3:5159841-5159860 Msa0625810:CDS 20.0%
!!! ATTTATCATTTTCAACATTG+AGG + chr4_3:5159965-5159984 None:intergenic 20.0%
!!! GAATTTTATTTGTTTCGAAT+AGG - chr4_3:5160502-5160521 Msa0625810:intron 20.0%
!! TCATATACCAAACAATAAAA+TGG + chr4_3:5160630-5160649 None:intergenic 20.0%
!!! ATTTTATTGTTTGGTATATG+AGG - chr4_3:5160629-5160648 Msa0625810:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr4_3:5160771-5160790 None:intergenic 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG + chr4_3:5160891-5160910 None:intergenic 20.0%
!! TAAACAATGTTGTCAAATAA+TGG + chr4_3:5161312-5161331 None:intergenic 20.0%
!!! TTGATAGTGAGATATTATTT+TGG - chr4_3:5161394-5161413 Msa0625810:intron 20.0%
!!! TATTTTGGTTTTGATTTCAT+AGG - chr4_3:5161409-5161428 Msa0625810:intron 20.0%
!! ATTACATATGAAACAAATTG+TGG + chr4_3:5161879-5161898 None:intergenic 20.0%
!! TTAAATCTTAATCACTAATG+CGG + chr4_3:5161926-5161945 None:intergenic 20.0%
!! CATTAGTGATTAAGATTTAA+AGG - chr4_3:5161926-5161945 Msa0625810:intron 20.0%
!!! ATATGTGATGATTTTTGAAA+TGG + chr4_3:5162702-5162721 None:intergenic 20.0%
!! ATCATCACATATATATAAGA+AGG - chr4_3:5162710-5162729 Msa0625810:intron 20.0%
!! TACAACAAAATAAACTAAAG+AGG + chr4_3:5163146-5163165 None:intergenic 20.0%
!!! TTTAGTTTATTTTGTTGTAG+TGG - chr4_3:5163147-5163166 Msa0625810:intron 20.0%
!!! GAATAAAGGGTTTCTTTTTT+GGG + chr4_3:5159147-5159166 None:intergenic 25.0%
!!! AGAATAAAGGGTTTCTTTTT+TGG + chr4_3:5159148-5159167 None:intergenic 25.0%
!! CAAAACTCGAAATTTTCAAT+TGG - chr4_3:5159279-5159298 Msa0625810:three_prime_UTR 25.0%
!! GAAATTTTCAATTGGGTATT+CGG - chr4_3:5159287-5159306 Msa0625810:three_prime_UTR 25.0%
!!! AGAAGAAAATTCTAGAATCT+AGG - chr4_3:5159336-5159355 Msa0625810:three_prime_UTR 25.0%
!!! GAAGAAAATTCTAGAATCTA+GGG - chr4_3:5159337-5159356 Msa0625810:three_prime_UTR 25.0%
! CACAATATTATAGGTTAATC+AGG + chr4_3:5159830-5159849 None:intergenic 25.0%
! ATTAACCTCAATGTAGAAAA+TGG - chr4_3:5159911-5159930 Msa0625810:CDS 25.0%
! TTAACCTCAATGTAGAAAAT+GGG - chr4_3:5159912-5159931 Msa0625810:CDS 25.0%
!!! ATTTTTTCCATCAAATTGTG+CGG + chr4_3:5160011-5160030 None:intergenic 25.0%
!! TAAGACTGACAATGTTTTAT+GGG - chr4_3:5160045-5160064 Msa0625810:intron 25.0%
! AGGAATATGATAGAACATTA+TGG - chr4_3:5160378-5160397 Msa0625810:CDS 25.0%
! AATATGATAGAACATTATGG+CGG - chr4_3:5160381-5160400 Msa0625810:CDS 25.0%
!!! TTGGTTAAATTGTTTTGGAT+GGG + chr4_3:5161097-5161116 None:intergenic 25.0%
!!! TTTGGTTAAATTGTTTTGGA+TGG + chr4_3:5161098-5161117 None:intergenic 25.0%
!!! TACAAAGTATTGACAAATAG+CGG + chr4_3:5161215-5161234 None:intergenic 25.0%
!! AAAGACACAATCTCATATTT+TGG + chr4_3:5161443-5161462 None:intergenic 25.0%
!!! CAAAGTCTTTTTAGTTACAA+AGG - chr4_3:5161643-5161662 Msa0625810:intron 25.0%
! TAAATCTTAATCACTAATGC+GGG + chr4_3:5161925-5161944 None:intergenic 25.0%
!! CTTCAAAATAGTTGATATGT+TGG - chr4_3:5162110-5162129 Msa0625810:intron 25.0%
!!! AAATGTTGATTTCCTAATGT+AGG + chr4_3:5162467-5162486 None:intergenic 25.0%
! TACATTAGGAAATCAACATT+TGG - chr4_3:5162466-5162485 Msa0625810:intron 25.0%
! ATGTAATCTACTATAACTGA+AGG + chr4_3:5162568-5162587 None:intergenic 25.0%
! TTTAATGTCCATAATGTATC+CGG + chr4_3:5162738-5162757 None:intergenic 25.0%
!! ATGATTGACATTTTTCTAAC+GGG + chr4_3:5162829-5162848 None:intergenic 25.0%
!! CATGATTGACATTTTTCTAA+CGG + chr4_3:5162830-5162849 None:intergenic 25.0%
!! AATTTTCTTCCATTCTTCTT+TGG - chr4_3:5163265-5163284 Msa0625810:intron 25.0%
! TATATAAAAAACACACTCCA+AGG + chr4_3:5163355-5163374 None:intergenic 25.0%
! ACATACTTATCATCATGAAT+AGG + chr4_3:5163485-5163504 None:intergenic 25.0%
! TATTCATGATGATAAGTATG+TGG - chr4_3:5163484-5163503 Msa0625810:intron 25.0%
! ATTCATGATGATAAGTATGT+GGG - chr4_3:5163485-5163504 Msa0625810:intron 25.0%
! GTGATATATAATTATACGGT+TGG - chr4_3:5163693-5163712 Msa0625810:intron 25.0%
! TTTCTCATTCATTCTTGAAA+CGG + chr4_3:5163901-5163920 None:intergenic 25.0%
!! AGATTAGAAAAGTATGATGT+CGG + chr4_3:5164022-5164041 None:intergenic 25.0%
!! TGTTTTTCTTCTGAATCAAA+AGG - chr4_3:5164086-5164105 Msa0625810:intron 25.0%
! TCATAACACATATGTTATGT+GGG + chr4_3:5164213-5164232 None:intergenic 25.0%
! TTCATAACACATATGTTATG+TGG + chr4_3:5164214-5164233 None:intergenic 25.0%
! TCTACAATATTCAAACATCA+AGG - chr4_3:5164268-5164287 Msa0625810:intron 25.0%
!! TTACTTATGAATTCTGCTTT+TGG + chr4_3:5164442-5164461 None:intergenic 25.0%
! AACTATACAATCTTGATCAA+CGG + chr4_3:5164759-5164778 None:intergenic 25.0%
! TTATTAATCTGGTAGTTGTT+AGG - chr4_3:5164943-5164962 Msa0625810:exon 25.0%
! TATTAATCTGGTAGTTGTTA+GGG - chr4_3:5164944-5164963 Msa0625810:exon 25.0%
!! TTTGAATACCAAATTGACTT+TGG - chr4_3:5165035-5165054 Msa0625810:five_prime_UTR 25.0%
! AAGAATTACCAAAGTCAATT+TGG + chr4_3:5165046-5165065 None:intergenic 25.0%
! ATTCAACAACTATGACTATT+TGG + chr4_3:5165097-5165116 None:intergenic 25.0%
!! TGACAGTGTAAAAAGTTTTA+CGG + chr4_3:5165162-5165181 None:intergenic 25.0%
! AAATAATTCTCACAGTTCAA+TGG - chr4_3:5165240-5165259 Msa0625810:five_prime_UTR 25.0%
AACCCTTTATTCTTCTTTCT+AGG - chr4_3:5159155-5159174 Msa0625810:three_prime_UTR 30.0%
ACCCTTTATTCTTCTTTCTA+GGG - chr4_3:5159156-5159175 Msa0625810:three_prime_UTR 30.0%
ACCCTAGAAAGAAGAATAAA+GGG + chr4_3:5159160-5159179 None:intergenic 30.0%
AACCCTAGAAAGAAGAATAA+AGG + chr4_3:5159161-5159180 None:intergenic 30.0%
!!! AAATTTCGAGTTTTGAGAGA+TGG + chr4_3:5159274-5159293 None:intergenic 30.0%
! ATTTCCCATTTTCTACATTG+AGG + chr4_3:5159919-5159938 None:intergenic 30.0%
! GTAAGACTGACAATGTTTTA+TGG - chr4_3:5160044-5160063 Msa0625810:intron 30.0%
TTCGTTACTAAAGAATCTAC+AGG + chr4_3:5160268-5160287 None:intergenic 30.0%
TGTAGATTCTTTAGTAACGA+AGG - chr4_3:5160267-5160286 Msa0625810:intron 30.0%
!! AGTTCTAGAGATTAATGAGT+TGG - chr4_3:5160353-5160372 Msa0625810:CDS 30.0%
! TAGAGATTAATGAGTTGGAT+AGG - chr4_3:5160358-5160377 Msa0625810:CDS 30.0%
TATTTGTTTCGAATAGGACA+TGG - chr4_3:5160508-5160527 Msa0625810:intron 30.0%
ATTTGTTTCGAATAGGACAT+GGG - chr4_3:5160509-5160528 Msa0625810:intron 30.0%
! ATGAGGAAAGATTTTTGTGA+AGG - chr4_3:5160646-5160665 Msa0625810:CDS 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr4_3:5160939-5160958 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr4_3:5160940-5160959 Msa0625810:intron 30.0%
!!! TGGTTAAATTGTTTTGGATG+GGG + chr4_3:5161096-5161115 None:intergenic 30.0%
TATATATGGGTGTAATGTAG+TGG + chr4_3:5161185-5161204 None:intergenic 30.0%
CATAACAGAAATCGAACAAA+TGG + chr4_3:5161264-5161283 None:intergenic 30.0%
TAACGCTATGTAATGTACTT+AGG - chr4_3:5161332-5161351 Msa0625810:intron 30.0%
TACTCAGCTCAAATATGATA+CGG + chr4_3:5161370-5161389 None:intergenic 30.0%
TATCATATTTGAGCTGAGTA+TGG - chr4_3:5161370-5161389 Msa0625810:intron 30.0%
!!! TGGTTTTGATTTCATAGGTT+AGG - chr4_3:5161414-5161433 Msa0625810:intron 30.0%
GAACATTAAGCATTTCCAAT+TGG - chr4_3:5161577-5161596 Msa0625810:intron 30.0%
GAAAACCAACCTTGATAAAT+TGG + chr4_3:5161615-5161634 None:intergenic 30.0%
CATATGAAACAAATTGTGGA+TGG + chr4_3:5161875-5161894 None:intergenic 30.0%
AAATCTTAATCACTAATGCG+GGG + chr4_3:5161924-5161943 None:intergenic 30.0%
GTTGCAACTTATGATAGTTT+GGG - chr4_3:5161948-5161967 Msa0625810:intron 30.0%
!! AACCATTTTTAATGCTAGCT+TGG - chr4_3:5162053-5162072 Msa0625810:intron 30.0%
TTCCAAGCTAGCATTAAAAA+TGG + chr4_3:5162058-5162077 None:intergenic 30.0%
!! ATTTTTAATGCTAGCTTGGA+AGG - chr4_3:5162057-5162076 Msa0625810:intron 30.0%
! TTTTAAGCTTCCTTAACCAA+AGG + chr4_3:5162089-5162108 None:intergenic 30.0%
! CAAAATAGTTGATATGTTGG+TGG - chr4_3:5162113-5162132 Msa0625810:intron 30.0%
! TTGGCTTATGATTTTACAGA+CGG - chr4_3:5162510-5162529 Msa0625810:intron 30.0%
AATGATGTCTTCATGATTCA+TGG + chr4_3:5162604-5162623 None:intergenic 30.0%
GAATCATGAAGACATCATTA+TGG - chr4_3:5162605-5162624 Msa0625810:intron 30.0%
ACAATTATCTGTCAGCATAT+AGG + chr4_3:5162638-5162657 None:intergenic 30.0%
ATGGAAAGTTATAGATGTGT+TGG + chr4_3:5162683-5162702 None:intergenic 30.0%
CTAAAATGACAAGTTCCTTT+AGG - chr4_3:5162803-5162822 Msa0625810:intron 30.0%
! AAACAGTTTGTTCATTTGCA+GGG - chr4_3:5162967-5162986 Msa0625810:intron 30.0%
AACTAAAGAGGTAGCAATTA+AGG + chr4_3:5163134-5163153 None:intergenic 30.0%
! TGTCTTGCAAATTTGCTTAA+CGG - chr4_3:5163203-5163222 Msa0625810:intron 30.0%
AGAAAATTAGTCATGCTAAG+AGG + chr4_3:5163253-5163272 None:intergenic 30.0%
TAGATGGAATGTTTAATCCT+TGG - chr4_3:5163335-5163354 Msa0625810:intron 30.0%
GAAACAAATGAGCACAAATT+AGG + chr4_3:5163419-5163438 None:intergenic 30.0%
TCGTGAAAAGCAATATAACA+TGG + chr4_3:5163446-5163465 None:intergenic 30.0%
!! ATAAGTATGTGGGTTAGTTA+TGG - chr4_3:5163495-5163514 Msa0625810:intron 30.0%
TGTCTCTCAATGAAAGAATT+TGG - chr4_3:5163558-5163577 Msa0625810:intron 30.0%
!!! AAAGAATTTGGCTTTTGTGT+AGG - chr4_3:5163570-5163589 Msa0625810:intron 30.0%
TATGATTTATCCATGAACAC+AGG - chr4_3:5163847-5163866 Msa0625810:intron 30.0%
AAAATACTTTCCTGTGTTCA+TGG + chr4_3:5163860-5163879 None:intergenic 30.0%
!!! TGAACACAGGAAAGTATTTT+TGG - chr4_3:5163860-5163879 Msa0625810:intron 30.0%
ATTCAAGTCTCATTCAATTC+AGG + chr4_3:5164117-5164136 None:intergenic 30.0%
! CTCACAAAATTTTCCATAGT+AGG + chr4_3:5164164-5164183 None:intergenic 30.0%
TGTGTTATGAAATGAAGACT+AGG - chr4_3:5164223-5164242 Msa0625810:intron 30.0%
!!! ATTTTTTCTCATTCCAATGC+AGG - chr4_3:5164312-5164331 Msa0625810:intron 30.0%
!! ATTTTGACAAAGCAGAAACT+TGG + chr4_3:5164788-5164807 None:intergenic 30.0%
AGTCAATAGATCTAAACCAT+TGG + chr4_3:5164837-5164856 None:intergenic 30.0%
! TGGTTTAGATCTATTGACTA+CGG - chr4_3:5164838-5164857 Msa0625810:CDS 30.0%
! TGGCTATGTTGTTATTAATC+TGG - chr4_3:5164932-5164951 Msa0625810:CDS 30.0%
CGAAGTTAATCTAAGGAAAA+AGG + chr4_3:5165128-5165147 None:intergenic 30.0%
TTTACACTGTCAACAAATCA+AGG - chr4_3:5165170-5165189 Msa0625810:five_prime_UTR 30.0%
CTAACTTAAACGTCATACAA+AGG + chr4_3:5165200-5165219 None:intergenic 30.0%
ATGAGGTAAGTGTGTGAAAA+AGG + chr4_3:5159101-5159120 None:intergenic 35.0%
!! AATCTAGGGTTTTGCAATGT+CGG - chr4_3:5159351-5159370 Msa0625810:three_prime_UTR 35.0%
GGAATGAAGATACCTGTATT+TGG + chr4_3:5159799-5159818 None:intergenic 35.0%
TAGGTTAATCAGGATTACGA+AGG + chr4_3:5159820-5159839 None:intergenic 35.0%
!! ATTTGTGATATTGGTGCTGT+TGG - chr4_3:5159850-5159869 Msa0625810:CDS 35.0%
! ACTGACAATGTTTTATGGGA+TGG - chr4_3:5160049-5160068 Msa0625810:intron 35.0%
TGAGAGTAAAATAAGCGTAG+CGG - chr4_3:5160097-5160116 Msa0625810:intron 35.0%
ACAATGTTAGAGAGAGAGTT+GGG - chr4_3:5160177-5160196 Msa0625810:intron 35.0%
TATCACCTATCGTGAAAAGA+TGG - chr4_3:5160201-5160220 Msa0625810:intron 35.0%
! TTCTACCATCTTTTCACGAT+AGG + chr4_3:5160209-5160228 None:intergenic 35.0%
AGTAACGAAGGTAGATAAGA+TGG - chr4_3:5160279-5160298 Msa0625810:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr4_3:5160705-5160724 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + chr4_3:5160805-5160824 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + chr4_3:5160809-5160828 None:intergenic 35.0%
TCTAAATCCGCCAAAATTAG+AGG - chr4_3:5161033-5161052 Msa0625810:intron 35.0%
CTAAATCCGCCAAAATTAGA+GGG - chr4_3:5161034-5161053 Msa0625810:intron 35.0%
!!! ATTTTGGCTCCCTCTAATTT+TGG + chr4_3:5161046-5161065 None:intergenic 35.0%
! AATCCCTCCTCACTTAATTT+TGG + chr4_3:5161062-5161081 None:intergenic 35.0%
!!! GGTTAAATTGTTTTGGATGG+GGG + chr4_3:5161095-5161114 None:intergenic 35.0%
!! AAACCGCTATTTTCAGTGTT+CGG + chr4_3:5161153-5161172 None:intergenic 35.0%
TAGCGGCTATAGGTATATAT+GGG + chr4_3:5161198-5161217 None:intergenic 35.0%
ATAGCGGCTATAGGTATATA+TGG + chr4_3:5161199-5161218 None:intergenic 35.0%
TATTGACAAATAGCGGCTAT+AGG + chr4_3:5161208-5161227 None:intergenic 35.0%
ATGGCTATTGTTCTACGATA+CGG + chr4_3:5161245-5161264 None:intergenic 35.0%
ATCTGCCAATTTATCAAGGT+TGG - chr4_3:5161607-5161626 Msa0625810:intron 35.0%
AAACAAATTGTGGATGGACA+TGG + chr4_3:5161869-5161888 None:intergenic 35.0%
GGTTGCAACTTATGATAGTT+TGG - chr4_3:5161947-5161966 Msa0625810:intron 35.0%
TGCTACTGATATGCTTAACA+AGG - chr4_3:5161973-5161992 Msa0625810:intron 35.0%
GCTACTGATATGCTTAACAA+GGG - chr4_3:5161974-5161993 Msa0625810:intron 35.0%
AACATAACCAGAGTTATGCA+AGG + chr4_3:5162016-5162035 None:intergenic 35.0%
GCATAACTCTGGTTATGTTA+CGG - chr4_3:5162017-5162036 Msa0625810:intron 35.0%
AAGGTTCATACCTTTGGTTA+AGG - chr4_3:5162076-5162095 Msa0625810:intron 35.0%
ATATGAGATGACACGAACAT+GGG + chr4_3:5162394-5162413 None:intergenic 35.0%
AAATCATAAGCCAAGTACAC+TGG + chr4_3:5162504-5162523 None:intergenic 35.0%
! ATAACTGAAGGCACAATTCA+GGG + chr4_3:5162556-5162575 None:intergenic 35.0%
! TATAACTGAAGGCACAATTC+AGG + chr4_3:5162557-5162576 None:intergenic 35.0%
!! GATAATTGTATGCCACTTTG+AGG - chr4_3:5162649-5162668 Msa0625810:intron 35.0%
! ACATATATATAAGAAGGCGC+CGG - chr4_3:5162716-5162735 Msa0625810:intron 35.0%
! GAAACAGTTTGTTCATTTGC+AGG - chr4_3:5162966-5162985 Msa0625810:intron 35.0%
! AACAGTTTGTTCATTTGCAG+GGG - chr4_3:5162968-5162987 Msa0625810:intron 35.0%
ACACACATTGAGATCTAAGA+GGG + chr4_3:5163008-5163027 None:intergenic 35.0%
! GTGCTATAGTATTGAGTGTT+TGG - chr4_3:5163039-5163058 Msa0625810:intron 35.0%
ACAGCTATTGGAATTTCAGA+TGG + chr4_3:5163297-5163316 None:intergenic 35.0%
TTGGCAAAAGGCAGTTATTT+CGG - chr4_3:5163654-5163673 Msa0625810:intron 35.0%
! CCACATAGAAGCACATTAAA+GGG + chr4_3:5163761-5163780 None:intergenic 35.0%
! ACCACATAGAAGCACATTAA+AGG + chr4_3:5163762-5163781 None:intergenic 35.0%
! TGCTTCTATGTGGTTTTTGA+TGG - chr4_3:5163768-5163787 Msa0625810:intron 35.0%
! CTGACGTGCATTTTCAATTA+TGG + chr4_3:5163982-5164001 None:intergenic 35.0%
AACTTATCTGCTACCTACTA+TGG - chr4_3:5164148-5164167 Msa0625810:intron 35.0%
AACTCTTCTATTACCTGCAT+TGG + chr4_3:5164328-5164347 None:intergenic 35.0%
ATGCAGGTAATAGAAGAGTT+CGG - chr4_3:5164328-5164347 Msa0625810:intron 35.0%
!! GAATTCTGCTTTTGGAGATT+TGG + chr4_3:5164434-5164453 None:intergenic 35.0%
! ATGAAAGTGTAGATGACTGT+CGG + chr4_3:5164499-5164518 None:intergenic 35.0%
CTAACAAATGACCACCTTAT+CGG - chr4_3:5164532-5164551 Msa0625810:CDS 35.0%
AGATAACAACAGACTGACAT+TGG + chr4_3:5164662-5164681 None:intergenic 35.0%
TGTAGGAAATTTCAACTGCA+GGG - chr4_3:5164865-5164884 Msa0625810:CDS 35.0%
TTCACTCACTCATATCTGTA+TGG + chr4_3:5164995-5165014 None:intergenic 35.0%
ATTCAAATACAACTGCCTTC+TGG + chr4_3:5165022-5165041 None:intergenic 35.0%
AATGCGTCGAAGTTAATCTA+AGG + chr4_3:5165135-5165154 None:intergenic 35.0%
TGCTTTGTGTTGTGTGATTG+TGG + chr4_3:5159064-5159083 None:intergenic 40.0%
!! ATCTAGGGTTTTGCAATGTC+GGG - chr4_3:5159352-5159371 Msa0625810:three_prime_UTR 40.0%
ACATTCATGGATCGAACTCT+GGG + chr4_3:5159382-5159401 None:intergenic 40.0%
! GTTTTCTTCTTCTCCGTTTC+TGG + chr4_3:5159475-5159494 None:intergenic 40.0%
!! AAAAGTGCCGCACAATTTGA+TGG - chr4_3:5160001-5160020 Msa0625810:intron 40.0%
!! GTTTTATGGGATGGAGTGTT+AGG - chr4_3:5160058-5160077 Msa0625810:intron 40.0%
GTGGTAAGACAAGACATGAT+AGG - chr4_3:5160144-5160163 Msa0625810:intron 40.0%
GACAATGTTAGAGAGAGAGT+TGG - chr4_3:5160176-5160195 Msa0625810:intron 40.0%
CAATGTTAGAGAGAGAGTTG+GGG - chr4_3:5160178-5160197 Msa0625810:intron 40.0%
AGATGGTAGAAACTCGACTT+AGG - chr4_3:5160218-5160237 Msa0625810:intron 40.0%
AAACTCGACTTAGGTGGTTT+GGG - chr4_3:5160227-5160246 Msa0625810:intron 40.0%
AGTCAACTTACTAGAAGCAG+AGG - chr4_3:5160307-5160326 Msa0625810:intron 40.0%
! AAGCCTTATCCAACTAAGTG+GGG + chr4_3:5160427-5160446 None:intergenic 40.0%
! CAAGCCTTATCCAACTAAGT+GGG + chr4_3:5160428-5160447 None:intergenic 40.0%
!! AGCAGTTTTAATGGAGGAGA+GGG - chr4_3:5160539-5160558 Msa0625810:intron 40.0%
! TTTTAATGGAGGAGAGGGAA+AGG - chr4_3:5160544-5160563 Msa0625810:intron 40.0%
!! AGATATTCGGTTTGGTTGAG+AGG - chr4_3:5160572-5160591 Msa0625810:intron 40.0%
AGGAGGAGAAAAGAGTAGAA+GGG - chr4_3:5160592-5160611 Msa0625810:intron 40.0%
! TTGAAACGGAGGGAGTATAA+GGG + chr4_3:5160691-5160710 None:intergenic 40.0%
! TTTGAAACGGAGGGAGTATA+AGG + chr4_3:5160692-5160711 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr4_3:5160944-5160963 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + chr4_3:5160806-5160825 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr4_3:5160944-5160963 Msa0625810:intron 40.0%
GAGCCAAAATTAAGTGAGGA+GGG - chr4_3:5161056-5161075 Msa0625810:intron 40.0%
!!! AAATTGTTTTGGATGGGGGA+GGG + chr4_3:5161091-5161110 None:intergenic 40.0%
!!! TAAATTGTTTTGGATGGGGG+AGG + chr4_3:5161092-5161111 None:intergenic 40.0%
TGGCTATTGTTCTACGATAC+GGG + chr4_3:5161244-5161263 None:intergenic 40.0%
TCAGCTCAAATATGATACGG+TGG + chr4_3:5161367-5161386 None:intergenic 40.0%
TTTCTACATAACTCACCGAC+TGG - chr4_3:5161512-5161531 Msa0625810:intron 40.0%
GTATCAATCAAGAGACCAGT+CGG + chr4_3:5161530-5161549 None:intergenic 40.0%
CTCGATCTGCCAATTTATCA+AGG - chr4_3:5161603-5161622 Msa0625810:intron 40.0%
ATAACCAGAGTTATGCAAGG+AGG + chr4_3:5162013-5162032 None:intergenic 40.0%
TTTCTGCTAAGTGTCAACAC+AGG + chr4_3:5162143-5162162 None:intergenic 40.0%
GATATGAGATGACACGAACA+TGG + chr4_3:5162395-5162414 None:intergenic 40.0%
GGAAATCAACATTTGGCAGT+TGG - chr4_3:5162473-5162492 Msa0625810:intron 40.0%
ATCAACATTTGGCAGTTGGT+TGG - chr4_3:5162477-5162496 Msa0625810:intron 40.0%
! TAACTGAAGGCACAATTCAG+GGG + chr4_3:5162555-5162574 None:intergenic 40.0%
TTGGACATATGTCCTCAAAG+TGG + chr4_3:5162664-5162683 None:intergenic 40.0%
GGTATACTCGTACTTACACA+TGG - chr4_3:5162774-5162793 Msa0625810:intron 40.0%
!! CATTTTTCTAACGGGCCTAA+AGG + chr4_3:5162821-5162840 None:intergenic 40.0%
GAGGTTACACACTCAAATCT+TGG - chr4_3:5162944-5162963 Msa0625810:intron 40.0%
GACACACATTGAGATCTAAG+AGG + chr4_3:5163009-5163028 None:intergenic 40.0%
GCTCAATCATGACACTGAAA+AGG + chr4_3:5163085-5163104 None:intergenic 40.0%
ATTGAGCTTCATAGCATGCA+AGG - chr4_3:5163098-5163117 Msa0625810:intron 40.0%
AAGAGGTAGCAATTAAGGCA+AGG + chr4_3:5163129-5163148 None:intergenic 40.0%
AGTGGAGTAACTGAAGTTGT+TGG - chr4_3:5163165-5163184 Msa0625810:intron 40.0%
! CTTCCATTCTTCTTTGGCTT+TGG - chr4_3:5163271-5163290 Msa0625810:intron 40.0%
TACTGTAGGCTAACAGCTAT+TGG + chr4_3:5163309-5163328 None:intergenic 40.0%
! AATAGCTGTTAGCCTACAGT+AGG - chr4_3:5163308-5163327 Msa0625810:intron 40.0%
ATCTATTTCGTTCAGCTTCC+AGG - chr4_3:5163528-5163547 Msa0625810:intron 40.0%
! TAACTGCCTTTTGCCAAGAA+TGG + chr4_3:5163651-5163670 None:intergenic 40.0%
CCCTTTAATGTGCTTCTATG+TGG - chr4_3:5163758-5163777 Msa0625810:intron 40.0%
TTCATTCTTGAAACGGCACA+TGG + chr4_3:5163894-5163913 None:intergenic 40.0%
GAGAAAAAGATAGTTGCACC+TGG - chr4_3:5163915-5163934 Msa0625810:intron 40.0%
AAATGCACGTCAGATGTGTA+AGG - chr4_3:5163989-5164008 Msa0625810:intron 40.0%
ACACATATGTTATGTGGGTC+AGG + chr4_3:5164208-5164227 None:intergenic 40.0%
TGCAGGTAATAGAAGAGTTC+GGG - chr4_3:5164329-5164348 Msa0625810:intron 40.0%
GTTCCAAATGTAGCTGTCAA+AGG + chr4_3:5164356-5164375 None:intergenic 40.0%
AGTAAAGACCTCGTAAAGAG+AGG - chr4_3:5164457-5164476 Msa0625810:intron 40.0%
CATCTACACTTTCATGCAAG+TGG - chr4_3:5164504-5164523 Msa0625810:intron 40.0%
! TGAATCTGAAGCAACCGATA+AGG + chr4_3:5164549-5164568 None:intergenic 40.0%
! TATCGGTTGCTTCAGATTCA+AGG - chr4_3:5164549-5164568 Msa0625810:CDS 40.0%
AACAACAGACTGACATTGGT+TGG + chr4_3:5164658-5164677 None:intergenic 40.0%
! CAGCGAATCTGTTTTCTAAG+AGG + chr4_3:5164704-5164723 None:intergenic 40.0%
! CTATTGACTACGGTTACTGT+AGG - chr4_3:5164848-5164867 Msa0625810:CDS 40.0%
CTGTAGGAAATTTCAACTGC+AGG - chr4_3:5164864-5164883 Msa0625810:CDS 40.0%
GTAGGAAATTTCAACTGCAG+GGG - chr4_3:5164866-5164885 Msa0625810:CDS 40.0%
CAACATAGCCAATGTAACCA+AGG + chr4_3:5164923-5164942 None:intergenic 40.0%
TGGTAGTTGTTAGGGAAGTT+GGG - chr4_3:5164952-5164971 Msa0625810:five_prime_UTR 40.0%
TGTTGTGTGATTGTGGAGTG+TGG + chr4_3:5159057-5159076 None:intergenic 45.0%
GACATTCATGGATCGAACTC+TGG + chr4_3:5159383-5159402 None:intergenic 45.0%
CGATCCATGAATGTCACTGT+TGG - chr4_3:5159388-5159407 Msa0625810:three_prime_UTR 45.0%
TCCATGAATGTCACTGTTGG+AGG - chr4_3:5159391-5159410 Msa0625810:three_prime_UTR 45.0%
TCCTCCAACAGTGACATTCA+TGG + chr4_3:5159395-5159414 None:intergenic 45.0%
TGGAGGAGATTCTGATTCCA+AGG - chr4_3:5159408-5159427 Msa0625810:three_prime_UTR 45.0%
AGGAGATTCTGATTCCAAGG+CGG - chr4_3:5159411-5159430 Msa0625810:three_prime_UTR 45.0%
GTTTCTTCACCGTCTTCACA+GGG + chr4_3:5159441-5159460 None:intergenic 45.0%
TGTGAAGACGGTGAAGAAAC+CGG - chr4_3:5159441-5159460 Msa0625810:three_prime_UTR 45.0%
GAAAACTTTGCCGCAATGTG+TGG - chr4_3:5159489-5159508 Msa0625810:intron 45.0%
GATGAATGCTTCGTGTTCGT+CGG - chr4_3:5159576-5159595 Msa0625810:three_prime_UTR 45.0%
! TGCTTCATCGACGGATTCTT+CGG - chr4_3:5159600-5159619 Msa0625810:exon 45.0%
! GATTCTTCGGCTTGTAGTAG+TGG - chr4_3:5159613-5159632 Msa0625810:CDS 45.0%
!! GAAGAAGCAGGTTGGTTTGA+AGG - chr4_3:5159672-5159691 Msa0625810:CDS 45.0%
!! GGTTGGTTTGAAGGTTGAGA+AGG - chr4_3:5159681-5159700 Msa0625810:CDS 45.0%
TGCTTCTGTTGAGGTGGAAT+CGG - chr4_3:5159732-5159751 Msa0625810:CDS 45.0%
GCTTGGGTTACACCAAATAC+AGG - chr4_3:5159784-5159803 Msa0625810:CDS 45.0%
! AAATAAGCGTAGCGGAGATG+AGG - chr4_3:5160105-5160124 Msa0625810:intron 45.0%
AGGTTGTTGTGTTGGATGTG+TGG - chr4_3:5160125-5160144 Msa0625810:intron 45.0%
TGGTAGAAACTCGACTTAGG+TGG - chr4_3:5160221-5160240 Msa0625810:intron 45.0%
GAAACTCGACTTAGGTGGTT+TGG - chr4_3:5160226-5160245 Msa0625810:intron 45.0%
CAACTTACTAGAAGCAGAGG+AGG - chr4_3:5160310-5160329 Msa0625810:CDS 45.0%
CTTATCCAACTAAGTGGGGT+TGG + chr4_3:5160423-5160442 None:intergenic 45.0%
CAACCCCACTTAGTTGGATA+AGG - chr4_3:5160421-5160440 Msa0625810:CDS 45.0%
! CCAAGCCTTATCCAACTAAG+TGG + chr4_3:5160429-5160448 None:intergenic 45.0%
CCACTTAGTTGGATAAGGCT+TGG - chr4_3:5160426-5160445 Msa0625810:CDS 45.0%
TGTTTCGAATAGGACATGGG+AGG - chr4_3:5160512-5160531 Msa0625810:intron 45.0%
GTTTCGAATAGGACATGGGA+GGG - chr4_3:5160513-5160532 Msa0625810:intron 45.0%
!! GGAGGGAAGAGCAGTTTTAA+TGG - chr4_3:5160530-5160549 Msa0625810:intron 45.0%
!! GGGAAGAGCAGTTTTAATGG+AGG - chr4_3:5160533-5160552 Msa0625810:intron 45.0%
!! GAGCAGTTTTAATGGAGGAG+AGG - chr4_3:5160538-5160557 Msa0625810:intron 45.0%
!! TATTCGGTTTGGTTGAGAGG+AGG - chr4_3:5160575-5160594 Msa0625810:intron 45.0%
GAGGAGGAGAAAAGAGTAGA+AGG - chr4_3:5160591-5160610 Msa0625810:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr4_3:5160943-5160962 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr4_3:5160943-5160962 Msa0625810:intron 45.0%
! TTGGCTCCCTCTAATTTTGG+CGG + chr4_3:5161043-5161062 None:intergenic 45.0%
GAGGGAGCCAAAATTAAGTG+AGG - chr4_3:5161052-5161071 Msa0625810:intron 45.0%
GGAGCCAAAATTAAGTGAGG+AGG - chr4_3:5161055-5161074 Msa0625810:intron 45.0%
!!! AATTGTTTTGGATGGGGGAG+GGG + chr4_3:5161090-5161109 None:intergenic 45.0%
TGTTCGGCGATTTGTAACAC+GGG + chr4_3:5161137-5161156 None:intergenic 45.0%
GTGTTCGGCGATTTGTAACA+CGG + chr4_3:5161138-5161157 None:intergenic 45.0%
TCGCCGAACACTGAAAATAG+CGG - chr4_3:5161147-5161166 Msa0625810:intron 45.0%
TGGCAGATCGAGAATCCAAT+TGG + chr4_3:5161595-5161614 None:intergenic 45.0%
ATTGCCTCCTTGCATAACTC+TGG - chr4_3:5162006-5162025 Msa0625810:intron 45.0%
GCTTGGAAGGTTCATACCTT+TGG - chr4_3:5162070-5162089 Msa0625810:intron 45.0%
TGTGATACATGACGTGATGC+AGG + chr4_3:5162431-5162450 None:intergenic 45.0%
CCTAATGTAGGTCGAAAGCA+TGG + chr4_3:5162455-5162474 None:intergenic 45.0%
CCATGCTTTCGACCTACATT+AGG - chr4_3:5162452-5162471 Msa0625810:intron 45.0%
TTTGTTCATTTGCAGGGGTG+TGG - chr4_3:5162973-5162992 Msa0625810:intron 45.0%
CACTGAAAAGGAACACGACA+TGG + chr4_3:5163073-5163092 None:intergenic 45.0%
TGGCCAAAGCCAAAGAAGAA+TGG + chr4_3:5163277-5163296 None:intergenic 45.0%
TCCATCTATCCTCCTACTGT+AGG + chr4_3:5163323-5163342 None:intergenic 45.0%
!! TTGCTTTTCACGACGAAGAG+TGG - chr4_3:5163453-5163472 Msa0625810:intron 45.0%
! TGCTTTTCACGACGAAGAGT+GGG - chr4_3:5163454-5163473 Msa0625810:intron 45.0%
ATTGAGAGACAGTTGCAACC+TGG + chr4_3:5163549-5163568 None:intergenic 45.0%
!! TTTGAGTTGCTCAGCTTCTC+TGG - chr4_3:5163599-5163618 Msa0625810:intron 45.0%
! TGCCTTTTGCCAAGAATGGT+GGG + chr4_3:5163647-5163666 None:intergenic 45.0%
! GAGTTCTGACAACAATGAGC+TGG + chr4_3:5163949-5163968 None:intergenic 45.0%
GCTCATTGTTGTCAGAACTC+AGG - chr4_3:5163949-5163968 Msa0625810:intron 45.0%
GGTCCTTTGACAGCTACATT+TGG - chr4_3:5164350-5164369 Msa0625810:intron 45.0%
AGCCTATAGTCAGCCAATTC+CGG - chr4_3:5164389-5164408 Msa0625810:intron 45.0%
TACCGGAATTGGCTGACTAT+AGG + chr4_3:5164394-5164413 None:intergenic 45.0%
!! TCTGCTTTTGGAGATTTGGC+AGG + chr4_3:5164430-5164449 None:intergenic 45.0%
ACCTCGTAAAGAGAGGATTC+AGG - chr4_3:5164464-5164483 Msa0625810:intron 45.0%
TCCTGAATCCTCTCTTTACG+AGG + chr4_3:5164468-5164487 None:intergenic 45.0%
TACACTTTCATGCAAGTGGC+TGG - chr4_3:5164508-5164527 Msa0625810:intron 45.0%
! ATCTGAAGCAACCGATAAGG+TGG + chr4_3:5164546-5164565 None:intergenic 45.0%
TTCTCCAATGCAGAAGCAGA+CGG - chr4_3:5164580-5164599 Msa0625810:CDS 45.0%
CTCCTTGACCTTAGAGTTGA+GGG + chr4_3:5164620-5164639 None:intergenic 45.0%
TCTCCTTGACCTTAGAGTTG+AGG + chr4_3:5164621-5164640 None:intergenic 45.0%
GGTCAAGGAGAAGTCAAATG+AGG - chr4_3:5164630-5164649 Msa0625810:CDS 45.0%
AACAGATTCGCTGCAGTATG+TGG - chr4_3:5164711-5164730 Msa0625810:CDS 45.0%
AAATCACGATGTGAGCTGTC+TGG - chr4_3:5164804-5164823 Msa0625810:CDS 45.0%
! GCTGTCTGGTTTACATCCAA+TGG - chr4_3:5164818-5164837 Msa0625810:CDS 45.0%
AATTTCAACTGCAGGGGATC+AGG - chr4_3:5164872-5164891 Msa0625810:CDS 45.0%
ATTTCAACTGCAGGGGATCA+GGG - chr4_3:5164873-5164892 Msa0625810:CDS 45.0%
TCCTCCACTTATTACCACGA+TGG - chr4_3:5164897-5164916 Msa0625810:CDS 45.0%
AAGGCCATCGTGGTAATAAG+TGG + chr4_3:5164904-5164923 None:intergenic 45.0%
ACTTATTACCACGATGGCCT+TGG - chr4_3:5164903-5164922 Msa0625810:CDS 45.0%
CTGGTAGTTGTTAGGGAAGT+TGG - chr4_3:5164951-5164970 Msa0625810:exon 45.0%
AGTTGTTAGGGAAGTTGGGT+AGG - chr4_3:5164956-5164975 Msa0625810:five_prime_UTR 45.0%
GAGTGAGTGAAATAGCCAGA+AGG - chr4_3:5165004-5165023 Msa0625810:five_prime_UTR 45.0%
GTGGAGTGTGGTGAGAAAGT+TGG + chr4_3:5159045-5159064 None:intergenic 50.0%
TTCATGGATCGAACTCTGGG+TGG + chr4_3:5159379-5159398 None:intergenic 50.0%
GGTTTCTTCACCGTCTTCAC+AGG + chr4_3:5159442-5159461 None:intergenic 50.0%
AACTTTGCCGCAATGTGTGG+TGG - chr4_3:5159492-5159511 Msa0625810:intron 50.0%
TTACGCCGGTGGTTTCAAAG+CGG - chr4_3:5159515-5159534 Msa0625810:three_prime_UTR 50.0%
TTCGTCGGATGCTTCATCGA+CGG - chr4_3:5159591-5159610 Msa0625810:exon 50.0%
TGCTGTTCCTGCTTCTGTTG+AGG - chr4_3:5159723-5159742 Msa0625810:CDS 50.0%
TGTTCCTGCTTCTGTTGAGG+TGG - chr4_3:5159726-5159745 Msa0625810:CDS 50.0%
GATTCCACCTCAACAGAAGC+AGG + chr4_3:5159733-5159752 None:intergenic 50.0%
GTTGAGGTGGAATCGGTTGA+TGG - chr4_3:5159739-5159758 Msa0625810:CDS 50.0%
!! GAATCGGTTGATGGCTTGGA+GGG - chr4_3:5159748-5159767 Msa0625810:CDS 50.0%
! ATGGCTTGGAGGGCAAGAAA+AGG - chr4_3:5159758-5159777 Msa0625810:CDS 50.0%
! AGGGCAAGAAAAGGTGTGCT+TGG - chr4_3:5159767-5159786 Msa0625810:CDS 50.0%
! GGGCAAGAAAAGGTGTGCTT+GGG - chr4_3:5159768-5159787 Msa0625810:CDS 50.0%
CGGAGATGAGGTTGTTGTGT+TGG - chr4_3:5160117-5160136 Msa0625810:intron 50.0%
! GGTGGTTTGGGCATGTAAAG+AGG - chr4_3:5160239-5160258 Msa0625810:intron 50.0%
!! ACTAAGTGGGGTTGGCTACA+TGG + chr4_3:5160415-5160434 None:intergenic 50.0%
TGTAGCCAACCCCACTTAGT+TGG - chr4_3:5160415-5160434 Msa0625810:CDS 50.0%
TAATGGAGGAGAGGGAAAGG+AGG - chr4_3:5160547-5160566 Msa0625810:intron 50.0%
AATGGAGGAGAGGGAAAGGA+GGG - chr4_3:5160548-5160567 Msa0625810:intron 50.0%
GGGAAAGGAGGGGAGATATT+CGG - chr4_3:5160559-5160578 Msa0625810:intron 50.0%
AGGAGGGGAGATATTCGGTT+TGG - chr4_3:5160564-5160583 Msa0625810:intron 50.0%
! GTTGGTTGGTCCAGTGTACT+TGG - chr4_3:5162491-5162510 Msa0625810:intron 50.0%
AGGCACAATTCAGGGGTAAC+AGG + chr4_3:5162548-5162567 None:intergenic 50.0%
!! AGAAGGCGCCGGATACATTA+TGG - chr4_3:5162727-5162746 Msa0625810:intron 50.0%
GTGTGAAAGTGAGCAAGCCT+TGG - chr4_3:5162890-5162909 Msa0625810:intron 50.0%
TGTGTAACCTCTGCGTCACA+AGG + chr4_3:5162935-5162954 None:intergenic 50.0%
! AGCTGTTAGCCTACAGTAGG+AGG - chr4_3:5163311-5163330 Msa0625810:intron 50.0%
GCCTACAGTAGGAGGATAGA+TGG - chr4_3:5163319-5163338 Msa0625810:intron 50.0%
! GCTTTTCACGACGAAGAGTG+GGG - chr4_3:5163455-5163474 Msa0625810:intron 50.0%
! CTGCCTTTTGCCAAGAATGG+TGG + chr4_3:5163648-5163667 None:intergenic 50.0%
TCTGACAACAATGAGCTGGC+AGG + chr4_3:5163945-5163964 None:intergenic 50.0%
TGTTATGTGGGTCAGGAAGC+AGG + chr4_3:5164201-5164220 None:intergenic 50.0%
TTGGAGATTTGGCAGGTACC+TGG + chr4_3:5164423-5164442 None:intergenic 50.0%
AAAGAGAGGATTCAGGAGCG+TGG - chr4_3:5164471-5164490 Msa0625810:intron 50.0%
! AAGAGAGGATTCAGGAGCGT+GGG - chr4_3:5164472-5164491 Msa0625810:intron 50.0%
TTTGCCGTCTGCTTCTGCAT+TGG + chr4_3:5164587-5164606 None:intergenic 50.0%
!! CTCCCTCAACTCTAAGGTCA+AGG - chr4_3:5164615-5164634 Msa0625810:CDS 50.0%
GCCATCGTGGTAATAAGTGG+AGG + chr4_3:5164901-5164920 None:intergenic 50.0%
CAATGTAACCAAGGCCATCG+TGG + chr4_3:5164914-5164933 None:intergenic 50.0%
! CACGATGGCCTTGGTTACAT+TGG - chr4_3:5164912-5164931 Msa0625810:CDS 50.0%
GGCGTAACCACCACACATTG+CGG + chr4_3:5159502-5159521 None:intergenic 55.0%
GCAATGTGTGGTGGTTACGC+CGG - chr4_3:5159501-5159520 Msa0625810:three_prime_UTR 55.0%
TCAAAGCGGCGGGATCATTG+TGG - chr4_3:5159529-5159548 Msa0625810:three_prime_UTR 55.0%
CAAAGCGGCGGGATCATTGT+GGG - chr4_3:5159530-5159549 Msa0625810:three_prime_UTR 55.0%
AAAGCGGCGGGATCATTGTG+GGG - chr4_3:5159531-5159550 Msa0625810:three_prime_UTR 55.0%
AGTAGTGGTGCTTCGTCGAG+TGG - chr4_3:5159628-5159647 Msa0625810:CDS 55.0%
GTAGTGGTGCTTCGTCGAGT+GGG - chr4_3:5159629-5159648 Msa0625810:CDS 55.0%
!! GGTGGAATCGGTTGATGGCT+TGG - chr4_3:5159744-5159763 Msa0625810:CDS 55.0%
!! GGAATCGGTTGATGGCTTGG+AGG - chr4_3:5159747-5159766 Msa0625810:CDS 55.0%
ATGGAGGAGAGGGAAAGGAG+GGG - chr4_3:5160549-5160568 Msa0625810:intron 55.0%
GGCCCACCATTCTTGGCAAA+AGG - chr4_3:5163642-5163661 Msa0625810:intron 55.0%
AATGAGCTGGCAGGACTTCC+AGG + chr4_3:5163936-5163955 None:intergenic 55.0%
GAGCAGCTCCCTCAACTCTA+AGG - chr4_3:5164609-5164628 Msa0625810:CDS 55.0%
ATGTGTGGTGGTTACGCCGG+TGG - chr4_3:5159504-5159523 Msa0625810:three_prime_UTR 60.0%
!! TCCCGCCGCTTTGAAACCAC+CGG + chr4_3:5159523-5159542 None:intergenic 60.0%
TGGTGCTTCGTCGAGTGGGA+AGG - chr4_3:5159633-5159652 Msa0625810:CDS 60.0%
TGCTTCGTCGAGTGGGAAGG+TGG - chr4_3:5159636-5159655 Msa0625810:CDS 60.0%
CGTGTGGGGAAGAAGCAGGT+TGG - chr4_3:5159664-5159683 Msa0625810:CDS 60.0%
GTGAGCAAGCCTTGGCGCAA+TGG - chr4_3:5162898-5162917 Msa0625810:intron 60.0%
CAAGCCTTGGCGCAATGGCA+AGG - chr4_3:5162903-5162922 Msa0625810:intron 60.0%
GCAACCTTGCCATTGCGCCA+AGG + chr4_3:5162910-5162929 None:intergenic 60.0%
GTTGCTGCCTTGTGACGCAG+AGG - chr4_3:5162925-5162944 Msa0625810:intron 60.0%
!! GCTCAGCTTCTCTGGAGCCT+TGG - chr4_3:5163607-5163626 Msa0625810:intron 60.0%
!! CAGCTTCTCTGGAGCCTTGG+CGG - chr4_3:5163610-5163629 Msa0625810:intron 60.0%
CTCTCGTGGCCCACCATTCT+TGG - chr4_3:5163635-5163654 Msa0625810:intron 60.0%
ATTTGGCAGGTACCTGGCGC+GGG + chr4_3:5164417-5164436 None:intergenic 60.0%
GATTTGGCAGGTACCTGGCG+CGG + chr4_3:5164418-5164437 None:intergenic 60.0%
CTTCACAGGGCGAACCGCCT+TGG + chr4_3:5159428-5159447 None:intergenic 65.0%
GGCGGTTCGCCCTGTGAAGA+CGG - chr4_3:5159429-5159448 Msa0625810:three_prime_UTR 65.0%
!! ACCGGCGCTGACGCCAGAAA+CGG - chr4_3:5159459-5159478 Msa0625810:intron 65.0%
!! TCCGTTTCTGGCGTCAGCGC+CGG + chr4_3:5159463-5159482 None:intergenic 65.0%
CGCCGGTGGTTTCAAAGCGG+CGG - chr4_3:5159518-5159537 Msa0625810:three_prime_UTR 65.0%
GCCGGTGGTTTCAAAGCGGC+GGG - chr4_3:5159519-5159538 Msa0625810:three_prime_UTR 65.0%
GCGGGATCATTGTGGGGTGG+CGG - chr4_3:5159537-5159556 Msa0625810:three_prime_UTR 65.0%
CGGGATCATTGTGGGGTGGC+GGG - chr4_3:5159538-5159557 Msa0625810:three_prime_UTR 65.0%
GGGATCATTGTGGGGTGGCG+GGG - chr4_3:5159539-5159558 Msa0625810:three_prime_UTR 65.0%
GAGGCGTGTGGGGAAGAAGC+AGG - chr4_3:5159660-5159679 Msa0625810:CDS 65.0%
GAGCCTTGGCGGAACTCTCG+TGG - chr4_3:5163621-5163640 Msa0625810:intron 65.0%
GCGGCGGGATCATTGTGGGG+TGG - chr4_3:5159534-5159553 Msa0625810:three_prime_UTR 70.0%
CGTCGAGTGGGAAGGTGGCG+AGG - chr4_3:5159641-5159660 Msa0625810:CDS 70.0%
TGGGAAGGTGGCGAGGCGTG+TGG - chr4_3:5159648-5159667 Msa0625810:CDS 70.0%
GGGAAGGTGGCGAGGCGTGT+GGG - chr4_3:5159649-5159668 Msa0625810:CDS 70.0%
GGAAGGTGGCGAGGCGTGTG+GGG - chr4_3:5159650-5159669 Msa0625810:CDS 70.0%
GGGCCACGAGAGTTCCGCCA+AGG + chr4_3:5163627-5163646 None:intergenic 70.0%
!! CCTGGCGCGGGTACCGGAAT+TGG + chr4_3:5164405-5164424 None:intergenic 70.0%
CCAATTCCGGTACCCGCGCC+AGG - chr4_3:5164402-5164421 Msa0625810:intron 70.0%
CAGGTACCTGGCGCGGGTAC+CGG + chr4_3:5164411-5164430 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 5159035 5165283 5159035 ID=Msa0625810;Name=Msa0625810
chr4_3 mRNA 5159035 5165283 5159035 ID=Msa0625810-mRNA-1;Parent=Msa0625810;Name=Msa0625810-mRNA-1;_AED=0.08;_eAED=0.08;_QI=332|1|1|1|0.8|0.66|6|543|365
chr4_3 exon 5159035 5159464 5159035 ID=Msa0625810-mRNA-1:exon:1425;Parent=Msa0625810-mRNA-1
chr4_3 exon 5159497 5159984 5159497 ID=Msa0625810-mRNA-1:exon:1424;Parent=Msa0625810-mRNA-1
chr4_3 exon 5160308 5160449 5160308 ID=Msa0625810-mRNA-1:exon:1423;Parent=Msa0625810-mRNA-1
chr4_3 exon 5160643 5160726 5160643 ID=Msa0625810-mRNA-1:exon:1422;Parent=Msa0625810-mRNA-1
chr4_3 exon 5160820 5160877 5160820 ID=Msa0625810-mRNA-1:exon:1421;Parent=Msa0625810-mRNA-1
chr4_3 exon 5164513 5165283 5164513 ID=Msa0625810-mRNA-1:exon:1420;Parent=Msa0625810-mRNA-1
chr4_3 five_prime_UTR 5164952 5165283 5164952 ID=Msa0625810-mRNA-1:five_prime_utr;Parent=Msa0625810-mRNA-1
chr4_3 CDS 5164513 5164951 5164513 ID=Msa0625810-mRNA-1:cds;Parent=Msa0625810-mRNA-1
chr4_3 CDS 5160820 5160877 5160820 ID=Msa0625810-mRNA-1:cds;Parent=Msa0625810-mRNA-1
chr4_3 CDS 5160643 5160726 5160643 ID=Msa0625810-mRNA-1:cds;Parent=Msa0625810-mRNA-1
chr4_3 CDS 5160308 5160449 5160308 ID=Msa0625810-mRNA-1:cds;Parent=Msa0625810-mRNA-1
chr4_3 CDS 5159610 5159984 5159610 ID=Msa0625810-mRNA-1:cds;Parent=Msa0625810-mRNA-1
chr4_3 three_prime_UTR 5159497 5159609 5159497 ID=Msa0625810-mRNA-1:three_prime_utr;Parent=Msa0625810-mRNA-1
chr4_3 three_prime_UTR 5159035 5159464 5159035 ID=Msa0625810-mRNA-1:three_prime_utr;Parent=Msa0625810-mRNA-1
Gene Sequence

>Msa0625810

ATGTCGGGTCCACCCAGAGTTCGATCCATGAATGTCACTGTTGGAGGAGATTCTGATTCCAAGGCGGTTCGCCCTGTGAAGACGGTGAAGAAACCGGCGCTGACGCCAGAAACGGAGAAGAAGAAAACTTTGCCGCAATGTGTGGTGGTTACGCCGGTGGTTTCAAAGCGGCGGGATCATTGTGGGGTGGCGGGGATGAAGAATTTGTCGATGAATGCTTCGTGTTCGTCGGATGCTTCATCGACGGATTCTTCGGCTTGTAGTAGTGGTGCTTCGTCGAGTGGGAAGGTGGCGAGGCGTGTGGGGAAGAAGCAGGTTGGTTTGAAGGTTGAGAAGGTGAGTATTGATGCTGTTGTTGCTGTTCCTGCTTCTGTTGAGGTGGAATCGGTTGATGGCTTGGAGGGCAAGAAAAGGTGTGCTTGGGTTACACCAAATACAGAACCATGTTATATTGCTTTTCACGACGAAGAGTGGGGAGTTCCTATTCATGATGATAAGAAACTGTTTGAGTTGCTCAGCTTCTCTGGAGCCTTGGCGGAACTCTCGTGGCCCACCATTCTTGGCAAAAGGCAGTTATTTCGGAAAGTATTTTTGGACTTTGATCCATGTGCCGTTTCAAGAATGAATGAGAAAAAGATAGTTGCACCTGGAAGTCCTGCCAGCTCATTGTTGTCAGAACTCAGGCTGCGATCCATAATTGAAAATGCACGTCAGATGTGTAAGGTAATAGAAGAGTTCGGGTCCTTTGACAGCTACATTTGGAACTTTGTGAACAATAAGCCTATAGTCAGCCAATTCCGGTACCCGCGCCAGGTACCTGCCAAATCTCCAAAAGCAGAATTCATAAGTAAAGACCTCGTAAAGAGAGGATTCAGGAGCGTGGGACCGACAGTCATCTACACTTTCATGCAAGTGGCTGGACTAACAAATGACCACCTTATCGGTTGCTTCAGATTCAAGGAGTGTATCTTCTCCAATGCAGAAGCAGACGGCAAAGAGAGCAGCTCCCTCAACTCTAAGGTCAAGGAGAAGTCAAATGAGGATCCAACCAATGTCAGTCTGTTGTTATCTGTGAACAAGTTGAGCTTCTCCTCTTAG
Protein sequence

>Msa0625810

MSGPPRVRSMNVTVGGDSDSKAVRPVKTVKKPALTPETEKKKTLPQCVVVTPVVSKRRDHCGVAGMKNLSMNASCSSDASSTDSSACSSGASSSGKVARRVGKKQVGLKVEKVSIDAVVAVPASVEVESVDGLEGKKRCAWVTPNTEPCYIAFHDEEWGVPIHDDKKLFELLSFSGALAELSWPTILGKRQLFRKVFLDFDPCAVSRMNEKKIVAPGSPASSLLSELRLRSIIENARQMCKVIEEFGSFDSYIWNFVNNKPIVSQFRYPRQVPAKSPKAEFISKDLVKRGFRSVGPTVIYTFMQVAGLTNDHLIGCFRFKECIFSNAEADGKESSSLNSKVKEKSNEDPTNVSLLLSVNKLSFSS*