Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646560 | AES89103.1 | 96.516 | 488 | 2 | 1 | 1 | 473 | 73 | 560 | 0.0 | 977 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646560 | sp|Q9T034|SYFA_ARATH | 78.689 | 488 | 85 | 4 | 1 | 472 | 1 | 485 | 0.0 | 805 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646560 | G7JG63 | 96.516 | 488 | 2 | 1 | 1 | 473 | 73 | 560 | 0.0 | 977 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0089540 | Msa0646560 | 0.820143 | 8.013547e-53 | -8.615850e-47 |
| Msa0605610 | Msa0646560 | 0.939284 | 1.645700e-99 | -8.615850e-47 |
| Msa0643960 | Msa0646560 | 0.800440 | 1.439648e-48 | -8.615850e-47 |
| Msa0646560 | Msa0929700 | 0.810338 | 1.211156e-50 | -8.615850e-47 |
| Msa0646560 | Msa0965800 | 0.819202 | 1.314172e-52 | -8.615850e-47 |
| Msa0646560 | Msa1166670 | 0.803069 | 4.156790e-49 | -8.615850e-47 |
| Msa0547920 | Msa0646560 | 0.800735 | 1.253628e-48 | -8.615850e-47 |
| Msa0550100 | Msa0646560 | 0.915201 | 7.799318e-85 | -8.615850e-47 |
| Msa0573550 | Msa0646560 | 0.804997 | 1.651108e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646560 | MtrunA17_Chr4g0034971 | 96.516 | 488 | 2 | 1 | 1 | 473 | 73 | 560 | 0.0 | 977 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646560 | AT4G39280.1 | 78.689 | 488 | 85 | 4 | 1 | 472 | 1 | 485 | 0.0 | 805 |
| Msa0646560 | AT4G39280.2 | 78.689 | 488 | 85 | 4 | 1 | 472 | 1 | 485 | 0.0 | 804 |
| Msa0646560 | AT3G58140.1 | 24.348 | 230 | 113 | 7 | 234 | 450 | 131 | 312 | 3.82e-11 | 65.5 |
Find 133 sgRNAs with CRISPR-Local
Find 607 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTGAATTTCAACTAATTT+TGG | 0.096630 | 4_3:+52330271 | Msa0646560:CDS |
| GCCAAAATTAGTTGAAATTC+AGG | 0.195550 | 4_3:-52330272 | None:intergenic |
| TCTATTGTGCGGCGGTTCTT+AGG | 0.224374 | 4_3:+52329932 | Msa0646560:five_prime_UTR |
| CCCATCGGCCGCAACATTTC+AGG | 0.247616 | 4_3:-52336980 | None:intergenic |
| CCACATGTATTGCTTGATAT+TGG | 0.248698 | 4_3:-52337558 | None:intergenic |
| CACAGGCTGCTAAGAATAAA+TGG | 0.253144 | 4_3:+52331187 | Msa0646560:CDS |
| TTATATCACCACTGTTATAA+AGG | 0.264608 | 4_3:-52337761 | None:intergenic |
| GGGATTGTTCAATAGGTAAA+AGG | 0.264711 | 4_3:-52337740 | None:intergenic |
| GAAGGGTTACTCGGTGAAAA+AGG | 0.272456 | 4_3:+52332573 | Msa0646560:CDS |
| TAAGAATAAATGGGTGGAAA+TGG | 0.321478 | 4_3:+52331197 | Msa0646560:CDS |
| TTATAAAGGGATTGTTCAAT+AGG | 0.338680 | 4_3:-52337747 | None:intergenic |
| GGCAGTTTCTTTGTTGTTGA+AGG | 0.347853 | 4_3:-52335428 | None:intergenic |
| ATCCCATACATTATCATTGT+TGG | 0.352476 | 4_3:-52337236 | None:intergenic |
| GCAATAACTTGGACATCTTC+AGG | 0.352913 | 4_3:-52337007 | None:intergenic |
| ACACAACTGCTGTTTCTTCC+CGG | 0.353252 | 4_3:+52335680 | Msa0646560:CDS |
| AACAAATATATCAGACATAA+TGG | 0.358053 | 4_3:-52337514 | None:intergenic |
| GGAAACACTTATGCTACTTT+GGG | 0.368488 | 4_3:+52330245 | Msa0646560:CDS |
| AGGAAACACTTATGCTACTT+TGG | 0.372317 | 4_3:+52330244 | Msa0646560:CDS |
| TGACTCTATCTTCCACATCT+TGG | 0.374666 | 4_3:-52331451 | None:intergenic |
| AATGTCATCAAGAGTCTTCA+TGG | 0.375800 | 4_3:+52330064 | Msa0646560:CDS |
| ATGGCAGAAGAAGCAGTTCT+TGG | 0.380478 | 4_3:+52329962 | Msa0646560:CDS |
| TACGGTCCACTGCTTCATTT+CGG | 0.381127 | 4_3:-52336062 | None:intergenic |
| TATATCACCACTGTTATAAA+GGG | 0.387936 | 4_3:-52337760 | None:intergenic |
| CTCACTCTCTGTGACTTAAT+AGG | 0.389562 | 4_3:+52336575 | Msa0646560:CDS |
| AGGCCAACAATGATAATGTA+TGG | 0.396670 | 4_3:+52337233 | Msa0646560:intron |
| AAGAATAAATGGGTGGAAAT+GGG | 0.403506 | 4_3:+52331198 | Msa0646560:CDS |
| TCTGCTTCTTCAAATACAAC+AGG | 0.409658 | 4_3:+52331478 | Msa0646560:CDS |
| GTGAAGCAAATTCATGAATC+TGG | 0.409753 | 4_3:+52335470 | Msa0646560:CDS |
| AACGATGAGATTAAAGATTC+AGG | 0.411017 | 4_3:+52329998 | Msa0646560:CDS |
| CATGGGGACTTTCTCTTGAA+AGG | 0.415287 | 4_3:+52337029 | Msa0646560:CDS |
| TATCTCCAGAGATGAACTTC+AGG | 0.416797 | 4_3:+52330310 | Msa0646560:CDS |
| TTCATCTCTGGAGATACCTT+CGG | 0.418177 | 4_3:-52330303 | None:intergenic |
| GCTGAGTTCCATCAGATAGA+AGG | 0.424934 | 4_3:+52336093 | Msa0646560:CDS |
| TACTTTGTTGCAGTGGGGAG+TGG | 0.425940 | 4_3:+52332742 | Msa0646560:intron |
| ATCACGAGCAGGATGTTGTT+GGG | 0.429335 | 4_3:-52335301 | None:intergenic |
| GTGCCAGCTGGTAAAGCATC+CGG | 0.436309 | 4_3:-52335699 | None:intergenic |
| ACCTGAAATGTTGCGGCCGA+TGG | 0.441480 | 4_3:+52336979 | Msa0646560:CDS |
| GCTTTCAACATAATTATTTG+TGG | 0.443741 | 4_3:-52333632 | None:intergenic |
| TTCCCCTTTGCAATTTCTGT+TGG | 0.447295 | 4_3:+52337666 | Msa0646560:three_prime_UTR |
| TTCCCGGATGCTTTACCAGC+TGG | 0.449839 | 4_3:+52335696 | Msa0646560:CDS |
| CATGATTTCTTCTCACGCTT+AGG | 0.453055 | 4_3:+52336605 | Msa0646560:CDS |
| CTTTCAACATAATTATTTGT+GGG | 0.453083 | 4_3:-52333631 | None:intergenic |
| AACTACCTGAAGTTCATCTC+TGG | 0.454281 | 4_3:-52330315 | None:intergenic |
| CCAAAATTAGTTGAAATTCA+GGG | 0.454614 | 4_3:-52330271 | None:intergenic |
| TCCATGCTAGGTTCTGTGTA+TGG | 0.455200 | 4_3:-52336801 | None:intergenic |
| CGTGGATATAGGATATTAAG+AGG | 0.457838 | 4_3:+52330198 | Msa0646560:intron |
| TGGGAAAGCAACTCATATCT+AGG | 0.457897 | 4_3:+52331217 | Msa0646560:CDS |
| TATCTAATGCTGCAGGTTTG+AGG | 0.459179 | 4_3:+52333603 | Msa0646560:intron |
| GCTAAAGGTCAGCCTCTTGA+AGG | 0.483989 | 4_3:+52332798 | Msa0646560:CDS |
| AAAGTCCCCATGCAATAACT+TGG | 0.488007 | 4_3:-52337018 | None:intergenic |
| ACCCGCTGAACATAATCTTC+AGG | 0.489399 | 4_3:-52335449 | None:intergenic |
| TCTGTGTATGGATTGTAAGC+AGG | 0.492584 | 4_3:-52336789 | None:intergenic |
| GCGAACAGAAATGTGAAGAT+AGG | 0.497269 | 4_3:-52329900 | None:intergenic |
| GAGTACAACTACACTGCTAA+AGG | 0.503823 | 4_3:+52332783 | Msa0646560:CDS |
| CTCACGTACCTTCTATCTGA+TGG | 0.507401 | 4_3:-52336101 | None:intergenic |
| TCATCTCTGGAGATACCTTC+GGG | 0.514328 | 4_3:-52330302 | None:intergenic |
| TGGGTAGAAGTAGGAAACTC+TGG | 0.514681 | 4_3:+52336947 | Msa0646560:CDS |
| CCTGAAATGTTGCGGCCGAT+GGG | 0.514857 | 4_3:+52336980 | Msa0646560:CDS |
| ATCTGGTGGATATGAGTCTA+GGG | 0.518465 | 4_3:+52335487 | Msa0646560:CDS |
| TTGGTAGATATGCATATGAC+TGG | 0.519858 | 4_3:+52335620 | Msa0646560:intron |
| GAGCAGGATGTTGTTGGGGC+TGG | 0.519969 | 4_3:-52335296 | None:intergenic |
| GCCTGAAGATTATGTTCAGC+GGG | 0.522388 | 4_3:+52335448 | Msa0646560:CDS |
| AATCTGGTGGATATGAGTCT+AGG | 0.523310 | 4_3:+52335486 | Msa0646560:CDS |
| GCGGTTCTTAGGTTTGAGAA+TGG | 0.524236 | 4_3:+52329943 | Msa0646560:exon |
| ACATGGGTGTTAACTGATGA+AGG | 0.528044 | 4_3:+52330224 | Msa0646560:CDS |
| CAAATAATTATGTTGAAAGC+AGG | 0.529786 | 4_3:+52333635 | Msa0646560:CDS |
| TTTATAATCTAGGACATGGA+AGG | 0.529872 | 4_3:+52332555 | Msa0646560:intron |
| AGCAGGTTTGAATTTCAGCT+TGG | 0.531031 | 4_3:-52336772 | None:intergenic |
| ATATTGCAAATGCAGGGCAT+TGG | 0.535921 | 4_3:+52332382 | Msa0646560:intron |
| AAACCAACAGAAATTGCAAA+GGG | 0.538353 | 4_3:-52337669 | None:intergenic |
| CAGTTGTGTGGGTCCGCAGA+AGG | 0.541428 | 4_3:-52335666 | None:intergenic |
| TAGAGAAATATTTATGACAT+GGG | 0.544237 | 4_3:+52337638 | Msa0646560:three_prime_UTR |
| AATCACGAGCAGGATGTTGT+TGG | 0.550429 | 4_3:-52335302 | None:intergenic |
| TTATAATCTAGGACATGGAA+GGG | 0.551939 | 4_3:+52332556 | Msa0646560:intron |
| AAGATGTCCAAGTTATTGCA+TGG | 0.554823 | 4_3:+52337011 | Msa0646560:CDS |
| GATGCTTTACCAGCTGGCAC+AGG | 0.556280 | 4_3:+52335702 | Msa0646560:CDS |
| TCTTCAAATACAACAGGGAC+AGG | 0.557365 | 4_3:+52331484 | Msa0646560:CDS |
| AGGATATTAAGAGGGAGACA+TGG | 0.561811 | 4_3:+52330207 | Msa0646560:intron |
| ACAGGCTGCTAAGAATAAAT+GGG | 0.564845 | 4_3:+52331188 | Msa0646560:CDS |
| CAAAATTAGTTGAAATTCAG+GGG | 0.565317 | 4_3:-52330270 | None:intergenic |
| CTTCAAGATAGCTTGTGCAC+AGG | 0.567618 | 4_3:+52331170 | Msa0646560:CDS |
| ATGTTGTTGGGGCTGGAACA+AGG | 0.568157 | 4_3:-52335289 | None:intergenic |
| TGCCAGCTGGTAAAGCATCC+GGG | 0.570368 | 4_3:-52335698 | None:intergenic |
| GGCCAACAATGATAATGTAT+GGG | 0.574828 | 4_3:+52337234 | Msa0646560:intron |
| CTGGTTGAAGGTCCAAGATG+TGG | 0.575608 | 4_3:+52331439 | Msa0646560:intron |
| CAGAGATCTCTTCGGCCACA+AGG | 0.576224 | 4_3:+52337268 | Msa0646560:CDS |
| GATAACATCAGAGATCTCTT+CGG | 0.577235 | 4_3:+52337260 | Msa0646560:CDS |
| TGAGTCCTCGATCACATACA+AGG | 0.577373 | 4_3:-52336556 | None:intergenic |
| ACATACAAACCTGTGCCAGC+TGG | 0.581794 | 4_3:-52335711 | None:intergenic |
| AAGCAAATTCATGAATCTGG+TGG | 0.584637 | 4_3:+52335473 | Msa0646560:CDS |
| GGGAAGAAACAGCAGTTGTG+TGG | 0.585320 | 4_3:-52335678 | None:intergenic |
| AGATGTCCAAGTTATTGCAT+GGG | 0.585697 | 4_3:+52337012 | Msa0646560:CDS |
| GGATATTAAGAGGGAGACAT+GGG | 0.586886 | 4_3:+52330208 | Msa0646560:intron |
| TCCATACACAGAACCTAGCA+TGG | 0.588226 | 4_3:+52336800 | Msa0646560:CDS |
| TAGGACATGGAAGGGTTACT+CGG | 0.591543 | 4_3:+52332564 | Msa0646560:intron |
| AAAGCAACTCATATCTAGGA+AGG | 0.600368 | 4_3:+52331221 | Msa0646560:CDS |
| GGAACTCAGCAAGATGTGTA+CGG | 0.600616 | 4_3:-52336080 | None:intergenic |
| CAAGCTATCTTGAAGACTGA+AGG | 0.601060 | 4_3:-52331162 | None:intergenic |
| GCCGCACAATAGAACGGCGA+CGG | 0.602780 | 4_3:-52329922 | None:intergenic |
| TGAAGACTGCCACCTTCAAG+AGG | 0.603906 | 4_3:-52332810 | None:intergenic |
| AACAGAAATGTGAAGATAGG+TGG | 0.605431 | 4_3:-52329897 | None:intergenic |
| GTAGAGAAATATTTATGACA+TGG | 0.607873 | 4_3:+52337637 | Msa0646560:three_prime_UTR |
| TCGTATAACAGTTATCATGA+AGG | 0.610125 | 4_3:+52336914 | Msa0646560:intron |
| CACCTGAAAATCTCCATGCT+AGG | 0.612290 | 4_3:-52336813 | None:intergenic |
| TAACTCGAGATAACTTTCAG+AGG | 0.616702 | 4_3:+52332638 | Msa0646560:CDS |
| GCCGTCGCCGTTCTATTGTG+CGG | 0.616946 | 4_3:+52329921 | Msa0646560:five_prime_UTR |
| TCAGGCCTTGTATGTGATCG+AGG | 0.620832 | 4_3:+52336551 | Msa0646560:intron |
| TGTTCAGACCTGAAATGTTG+CGG | 0.621149 | 4_3:+52336972 | Msa0646560:CDS |
| GGAAGAAACAGCAGTTGTGT+GGG | 0.622693 | 4_3:-52335677 | None:intergenic |
| GTGTCATGTGAATCACGAGC+AGG | 0.626400 | 4_3:-52335312 | None:intergenic |
| GGTGAATTTGCAGCTGAACG+TGG | 0.628430 | 4_3:+52330019 | Msa0646560:CDS |
| CCAATATCAAGCAATACATG+TGG | 0.632002 | 4_3:+52337558 | Msa0646560:three_prime_UTR |
| CAAACCAACAGAAATTGCAA+AGG | 0.633270 | 4_3:-52337670 | None:intergenic |
| AAAGGTCAGCCTCTTGAAGG+TGG | 0.635059 | 4_3:+52332801 | Msa0646560:CDS |
| TGCATATGACTGGAAAAGAG+AGG | 0.636420 | 4_3:+52335630 | Msa0646560:CDS |
| GAACAATCCCTTTATAACAG+TGG | 0.642484 | 4_3:+52337753 | Msa0646560:three_prime_UTR |
| GGCTGCTAAGAATAAATGGG+TGG | 0.644736 | 4_3:+52331191 | Msa0646560:CDS |
| ACATCTTCAGGAAGTCCCAT+CGG | 0.645307 | 4_3:-52336995 | None:intergenic |
| TCACGAGCAGGATGTTGTTG+GGG | 0.645590 | 4_3:-52335300 | None:intergenic |
| AGAACCGCCGCACAATAGAA+CGG | 0.646809 | 4_3:-52329928 | None:intergenic |
| CTGCTTCTTCAAATACAACA+GGG | 0.647717 | 4_3:+52331479 | Msa0646560:CDS |
| GTCGCCGTTCTATTGTGCGG+CGG | 0.649096 | 4_3:+52329924 | Msa0646560:five_prime_UTR |
| GATGTCCAAGTTATTGCATG+GGG | 0.652254 | 4_3:+52337013 | Msa0646560:CDS |
| TGCCTGAAGATTATGTTCAG+CGG | 0.652900 | 4_3:+52335447 | Msa0646560:CDS |
| CGACTTGGAATTGAATGAAG+TGG | 0.657604 | 4_3:+52337490 | Msa0646560:exon |
| GTGGATATAGGATATTAAGA+GGG | 0.659435 | 4_3:+52330199 | Msa0646560:intron |
| CTGGTGGATATGAGTCTAGG+GGG | 0.660548 | 4_3:+52335489 | Msa0646560:CDS |
| TTTCAGATACGTCGATGCTG+TGG | 0.662586 | 4_3:+52330087 | Msa0646560:CDS |
| TGACATTGACGATTTCGTTG+TGG | 0.667924 | 4_3:-52330048 | None:intergenic |
| TGTATTCCGAAATGAAGCAG+TGG | 0.678250 | 4_3:+52336056 | Msa0646560:CDS |
| TCTGGTGGATATGAGTCTAG+GGG | 0.691706 | 4_3:+52335488 | Msa0646560:CDS |
| TCTCTGGAGATACCTTCGGG+CGG | 0.738824 | 4_3:-52330299 | None:intergenic |
| AACCAACAGAAATTGCAAAG+GGG | 0.744711 | 4_3:-52337668 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAATGTCAATTTAATTT+TGG | - | chr4_3:52330134-52330153 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTTCTTTCTTAA+AGG | - | chr4_3:52330946-52330965 | None:intergenic | 10.0% |
| !!! | TAATTTTCTCAAGTTAATAA+CGG | + | chr4_3:52330592-52330611 | Msa0646560:intron | 15.0% |
| !!! | TTGAATCTAATTGTTTTTTA+TGG | + | chr4_3:52331121-52331140 | Msa0646560:intron | 15.0% |
| !! | TAATGTTCTATTAAAATTGA+GGG | + | chr4_3:52331630-52331649 | Msa0646560:intron | 15.0% |
| !!! | AATTTGAAAAAGTTTTATGT+AGG | - | chr4_3:52333236-52333255 | None:intergenic | 15.0% |
| !! | TTAGATGTAAAGAATAATAA+TGG | + | chr4_3:52333879-52333898 | Msa0646560:intron | 15.0% |
| !!! | ATCATTCAAATAAAAGATTT+TGG | - | chr4_3:52334949-52334968 | None:intergenic | 15.0% |
| !!! | AAAATCTTTTATTTGAATGA+TGG | + | chr4_3:52334948-52334967 | Msa0646560:intron | 15.0% |
| !!! | AAATATTTTTTTGGAGAAAA+TGG | - | chr4_3:52336024-52336043 | None:intergenic | 15.0% |
| !!! | TCTATAGAGAAATATTTTTT+TGG | - | chr4_3:52336033-52336052 | None:intergenic | 15.0% |
| !!! | AAATTAATTCATTTTACTGT+TGG | - | chr4_3:52337091-52337110 | None:intergenic | 15.0% |
| !!! | TTTTTTTTGTTGTCTTTTTA+AGG | + | chr4_3:52337338-52337357 | Msa0646560:intron | 15.0% |
| !!! | TTTTTTTGTTGTCTTTTTAA+GGG | + | chr4_3:52337339-52337358 | Msa0646560:intron | 15.0% |
| !! | TACTACTAAATAATGTATTG+CGG | - | chr4_3:52330486-52330505 | None:intergenic | 20.0% |
| !! | TACAAAATATTGTGAAATAG+TGG | + | chr4_3:52330504-52330523 | Msa0646560:intron | 20.0% |
| !! | GAAAGAAAAAAAAAATGAGT+TGG | + | chr4_3:52330950-52330969 | Msa0646560:intron | 20.0% |
| !!! | ATTCTAAATCTACTACTTTT+GGG | + | chr4_3:52331254-52331273 | Msa0646560:intron | 20.0% |
| !! | CTAATGTTCTATTAAAATTG+AGG | + | chr4_3:52331629-52331648 | Msa0646560:intron | 20.0% |
| !! | AATGTTCTATTAAAATTGAG+GGG | + | chr4_3:52331631-52331650 | Msa0646560:intron | 20.0% |
| !! | AATCAGATAATAATAGATAG+TGG | + | chr4_3:52331692-52331711 | Msa0646560:intron | 20.0% |
| !! | GTTTCCATATAATTAACATA+AGG | - | chr4_3:52332284-52332303 | None:intergenic | 20.0% |
| !!! | ATATTTTATAATCTAGGACA+TGG | + | chr4_3:52332551-52332570 | Msa0646560:intron | 20.0% |
| !!! | GATGTATTTTTTTATGATAC+AGG | - | chr4_3:52333164-52333183 | None:intergenic | 20.0% |
| !!! | TTATTTGATGTTCACTTTTT+TGG | - | chr4_3:52333350-52333369 | None:intergenic | 20.0% |
| !! | CTTTCAACATAATTATTTGT+GGG | - | chr4_3:52333634-52333653 | None:intergenic | 20.0% |
| !! | TTCTACTAAGGATTTATTAA+AGG | - | chr4_3:52334051-52334070 | None:intergenic | 20.0% |
| !!! | GAATCCCAAATTTTTTAATA+TGG | + | chr4_3:52334084-52334103 | Msa0646560:intron | 20.0% |
| !! | GAAGCCATATTAAAAAATTT+GGG | - | chr4_3:52334091-52334110 | None:intergenic | 20.0% |
| !! | TCTTGCTTATTTATGTTATT+TGG | + | chr4_3:52335146-52335165 | Msa0646560:intron | 20.0% |
| !!! | CTTGCTTATTTATGTTATTT+GGG | + | chr4_3:52335147-52335166 | Msa0646560:intron | 20.0% |
| !!! | TTGCTTATTTATGTTATTTG+GGG | + | chr4_3:52335148-52335167 | Msa0646560:intron | 20.0% |
| !!! | TTACATCTTAATGCTTTAAA+TGG | + | chr4_3:52335246-52335265 | Msa0646560:intron | 20.0% |
| !! | GAAAGAAAAATGAAGATAAT+AGG | - | chr4_3:52335805-52335824 | None:intergenic | 20.0% |
| !! | GTGGAAAAAAAAATCATAAT+TGG | - | chr4_3:52336207-52336226 | None:intergenic | 20.0% |
| !! | TTGAACCATAAAAGTAAAAA+GGG | - | chr4_3:52336471-52336490 | None:intergenic | 20.0% |
| !! | ATTGAACCATAAAAGTAAAA+AGG | - | chr4_3:52336472-52336491 | None:intergenic | 20.0% |
| !! | AACAAATTTAGTGAATGTAT+CGG | + | chr4_3:52337141-52337160 | Msa0646560:intron | 20.0% |
| !!! | TTGTTATTTTTCCTAAAAAC+AGG | + | chr4_3:52337213-52337232 | Msa0646560:intron | 20.0% |
| !! | TGAATAAATCACTGTTTATT+TGG | + | chr4_3:52337312-52337331 | Msa0646560:intron | 20.0% |
| !! | GAATAAATCACTGTTTATTT+GGG | + | chr4_3:52337313-52337332 | Msa0646560:intron | 20.0% |
| !! | AAAAAAACATGGAAAATACA+TGG | - | chr4_3:52337430-52337449 | None:intergenic | 20.0% |
| !! | AACAAATATATCAGACATAA+TGG | - | chr4_3:52337517-52337536 | None:intergenic | 20.0% |
| !! | TAGAGAAATATTTATGACAT+GGG | + | chr4_3:52337638-52337657 | Msa0646560:three_prime_UTR | 20.0% |
| ! | TAAATCGTTTGTGACAAATT+TGG | + | chr4_3:52330165-52330184 | Msa0646560:intron | 25.0% |
| ! | CAAAATTAGTTGAAATTCAG+GGG | - | chr4_3:52330273-52330292 | None:intergenic | 25.0% |
| ! | CCAAAATTAGTTGAAATTCA+GGG | - | chr4_3:52330274-52330293 | None:intergenic | 25.0% |
| ! | TCAGATTAAATGTATGTGTT+CGG | + | chr4_3:52330393-52330412 | Msa0646560:intron | 25.0% |
| !! | GATTCTAAATCTACTACTTT+TGG | + | chr4_3:52331253-52331272 | Msa0646560:intron | 25.0% |
| ! | ACTTATCATAAACCAATTTC+TGG | + | chr4_3:52331420-52331439 | Msa0646560:intron | 25.0% |
| !!! | AAGTTCTTTTTTCTTTCCTT+GGG | + | chr4_3:52331590-52331609 | Msa0646560:intron | 25.0% |
| ! | ATGTTCTATTAAAATTGAGG+GGG | + | chr4_3:52331632-52331651 | Msa0646560:intron | 25.0% |
| ! | TAAAACATGGATTTCAAAGA+AGG | - | chr4_3:52331987-52332006 | None:intergenic | 25.0% |
| !!! | ATATGCTTATCTCTAAAACA+TGG | - | chr4_3:52332000-52332019 | None:intergenic | 25.0% |
| !!! | TGTTTTAGAGATAAGCATAT+AGG | + | chr4_3:52332000-52332019 | Msa0646560:intron | 25.0% |
| !! | TTTGGTTTATTGTATTACGT+TGG | + | chr4_3:52332037-52332056 | Msa0646560:intron | 25.0% |
| ! | TTCAACTAAATATGTGAGAT+AGG | + | chr4_3:52332092-52332111 | Msa0646560:intron | 25.0% |
| ! | TAAATATGTGAGATAGGTAT+AGG | + | chr4_3:52332098-52332117 | Msa0646560:intron | 25.0% |
| ! | TAAGTCATAACTAAAGAGAA+TGG | - | chr4_3:52332151-52332170 | None:intergenic | 25.0% |
| ! | TCCTCCTTATGTTAATTATA+TGG | + | chr4_3:52332277-52332296 | Msa0646560:intron | 25.0% |
| ! | TCCATATAATTAACATAAGG+AGG | - | chr4_3:52332281-52332300 | None:intergenic | 25.0% |
| ! | AAATGAAATGGTTATTACTG+TGG | - | chr4_3:52332451-52332470 | None:intergenic | 25.0% |
| ! | TGAAGAACAATCAAATGAAA+TGG | - | chr4_3:52332463-52332482 | None:intergenic | 25.0% |
| ! | CAATAGGAAAATTCATATTC+TGG | + | chr4_3:52332911-52332930 | Msa0646560:intron | 25.0% |
| ! | AATAAAGCATATACGATATG+TGG | + | chr4_3:52333022-52333041 | Msa0646560:intron | 25.0% |
| ! | ATATTGGACAGTATACATAT+AGG | - | chr4_3:52333053-52333072 | None:intergenic | 25.0% |
| ! | GCATAATTTCCTAAACATAT+TGG | - | chr4_3:52333069-52333088 | None:intergenic | 25.0% |
| !!! | TAGGAAATTATGCGTTTTTT+TGG | + | chr4_3:52333076-52333095 | Msa0646560:intron | 25.0% |
| !!! | TTTTTGGTAGTTTCTATATG+TGG | + | chr4_3:52333092-52333111 | Msa0646560:intron | 25.0% |
| ! | ATTTGTATGATGTGAACTTA+TGG | + | chr4_3:52333253-52333272 | Msa0646560:intron | 25.0% |
| ! | ACACAATGATCAAATATGTT+CGG | - | chr4_3:52333425-52333444 | None:intergenic | 25.0% |
| ! | CATTGTGTATTTAATAGATC+TGG | + | chr4_3:52333437-52333456 | Msa0646560:intron | 25.0% |
| !!! | CATTTTTCCATTTTTAGGTA+CGG | + | chr4_3:52333461-52333480 | Msa0646560:intron | 25.0% |
| !!! | ATTTTTCCATTTTTAGGTAC+GGG | + | chr4_3:52333462-52333481 | Msa0646560:intron | 25.0% |
| ! | TTACAAAATGTCAATCTCAA+AGG | - | chr4_3:52333579-52333598 | None:intergenic | 25.0% |
| !! | TTGAGATTGACATTTTGTAA+TGG | + | chr4_3:52333579-52333598 | Msa0646560:intron | 25.0% |
| ! | GCTTTCAACATAATTATTTG+TGG | - | chr4_3:52333635-52333654 | None:intergenic | 25.0% |
| ! | CAAATAATTATGTTGAAAGC+AGG | + | chr4_3:52333635-52333654 | Msa0646560:CDS | 25.0% |
| !! | AGTTTGATTTATTTATTGGG+GGG | - | chr4_3:52333958-52333977 | None:intergenic | 25.0% |
| !! | GAGTTTGATTTATTTATTGG+GGG | - | chr4_3:52333959-52333978 | None:intergenic | 25.0% |
| !! | CGAGTTTGATTTATTTATTG+GGG | - | chr4_3:52333960-52333979 | None:intergenic | 25.0% |
| !! | CCGAGTTTGATTTATTTATT+GGG | - | chr4_3:52333961-52333980 | None:intergenic | 25.0% |
| ! | CCCAATAAATAAATCAAACT+CGG | + | chr4_3:52333958-52333977 | Msa0646560:intron | 25.0% |
| ! | CAGTGGAAAAATAAAATGTT+TGG | + | chr4_3:52334008-52334027 | Msa0646560:intron | 25.0% |
| ! | GGAAGCCATATTAAAAAATT+TGG | - | chr4_3:52334092-52334111 | None:intergenic | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr4_3:52334550-52334569 | Msa0646560:intron | 25.0% |
| ! | TTGATCTATTCTTCTTACAA+CGG | - | chr4_3:52334616-52334635 | None:intergenic | 25.0% |
| ! | TGTAAGAAGAATAGATCAAA+TGG | + | chr4_3:52334617-52334636 | Msa0646560:intron | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | - | chr4_3:52334732-52334751 | None:intergenic | 25.0% |
| !! | GATTCGGCTTTTATAATTTA+GGG | - | chr4_3:52334853-52334872 | None:intergenic | 25.0% |
| ! | TAACCTTACAATTTATTCCT+TGG | + | chr4_3:52335601-52335620 | Msa0646560:intron | 25.0% |
| ! | TGGTTTCTGCAAAATTATAA+TGG | - | chr4_3:52336004-52336023 | None:intergenic | 25.0% |
| ! | TGAATTGAAATGGAAAATCA+CGG | - | chr4_3:52336534-52336553 | None:intergenic | 25.0% |
| ! | ATGAGTTAAATGTTGAATGT+AGG | + | chr4_3:52336660-52336679 | Msa0646560:intron | 25.0% |
| ! | AAAATTTCTTTGTTGAGTTC+AGG | + | chr4_3:52336744-52336763 | Msa0646560:intron | 25.0% |
| ! | TGATTAACATGTAATCTCTT+GGG | - | chr4_3:52336889-52336908 | None:intergenic | 25.0% |
| ! | ACAAATTTAGTGAATGTATC+GGG | + | chr4_3:52337142-52337161 | Msa0646560:intron | 25.0% |
| !!! | TATTTTCCATGTTTTTTTGC+AGG | + | chr4_3:52337432-52337451 | Msa0646560:intron | 25.0% |
| !! | AAAAATTCAATATGTCGACT+TGG | + | chr4_3:52337475-52337494 | Msa0646560:CDS | 25.0% |
| !! | TGGTAATAGCATTTTTCATT+TGG | + | chr4_3:52337615-52337634 | Msa0646560:three_prime_UTR | 25.0% |
| ! | GTAGAGAAATATTTATGACA+TGG | + | chr4_3:52337637-52337656 | Msa0646560:three_prime_UTR | 25.0% |
| ! | TTATAAAGGGATTGTTCAAT+AGG | - | chr4_3:52337750-52337769 | None:intergenic | 25.0% |
| AACGATGAGATTAAAGATTC+AGG | + | chr4_3:52329998-52330017 | Msa0646560:CDS | 30.0% | |
| GTGGATATAGGATATTAAGA+GGG | + | chr4_3:52330199-52330218 | Msa0646560:intron | 30.0% | |
| ! | CCCTGAATTTCAACTAATTT+TGG | + | chr4_3:52330271-52330290 | Msa0646560:CDS | 30.0% |
| GCCAAAATTAGTTGAAATTC+AGG | - | chr4_3:52330275-52330294 | None:intergenic | 30.0% | |
| AAGCTTCAATAGTAGAAAAG+GGG | - | chr4_3:52330374-52330393 | None:intergenic | 30.0% | |
| GAAGCTTCAATAGTAGAAAA+GGG | - | chr4_3:52330375-52330394 | None:intergenic | 30.0% | |
| TGAAGCTTCAATAGTAGAAA+AGG | - | chr4_3:52330376-52330395 | None:intergenic | 30.0% | |
| TTGTGAAATAGTGGTTATAG+TGG | + | chr4_3:52330513-52330532 | Msa0646560:intron | 30.0% | |
| AAGATGGTAGAAAATAGACT+TGG | + | chr4_3:52330660-52330679 | Msa0646560:intron | 30.0% | |
| AGATGGTAGAAAATAGACTT+GGG | + | chr4_3:52330661-52330680 | Msa0646560:intron | 30.0% | |
| GATTCAAATCATTAGAGGTA+GGG | + | chr4_3:52330749-52330768 | Msa0646560:intron | 30.0% | |
| ATTCAAATCATTAGAGGTAG+GGG | + | chr4_3:52330750-52330769 | Msa0646560:intron | 30.0% | |
| ! | GTTTCTCTTGTAGTTTTTCT+AGG | - | chr4_3:52330780-52330799 | None:intergenic | 30.0% |
| TACAAGAGAAACTGTTATGA+AGG | + | chr4_3:52330788-52330807 | Msa0646560:intron | 30.0% | |
| !! | TGGTTTTTGAAAGAACACTA+TGG | + | chr4_3:52330982-52331001 | Msa0646560:intron | 30.0% |
| GTTACAGTTAGTATTGTATC+TGG | + | chr4_3:52331068-52331087 | Msa0646560:intron | 30.0% | |
| TAAGAATAAATGGGTGGAAA+TGG | + | chr4_3:52331197-52331216 | Msa0646560:CDS | 30.0% | |
| AAGAATAAATGGGTGGAAAT+GGG | + | chr4_3:52331198-52331217 | Msa0646560:CDS | 30.0% | |
| TTGAGATGAGAATTACTTCA+TGG | + | chr4_3:52331387-52331406 | Msa0646560:intron | 30.0% | |
| !! | ATAAACCAATTTCTGGTTGA+AGG | + | chr4_3:52331427-52331446 | Msa0646560:intron | 30.0% |
| TAATTGTGTTGAAACTTGAG+AGG | + | chr4_3:52331547-52331566 | Msa0646560:intron | 30.0% | |
| AATTGTGTTGAAACTTGAGA+GGG | + | chr4_3:52331548-52331567 | Msa0646560:intron | 30.0% | |
| !!! | GAAGTTCTTTTTTCTTTCCT+TGG | + | chr4_3:52331589-52331608 | Msa0646560:intron | 30.0% |
| !! | ACAACTCTGAAGTATAAGAA+TGG | - | chr4_3:52331881-52331900 | None:intergenic | 30.0% |
| TCATAACTAAAGAGAATGGA+AGG | - | chr4_3:52332147-52332166 | None:intergenic | 30.0% | |
| CTCTTTAGTTATGACTTATG+AGG | + | chr4_3:52332153-52332172 | Msa0646560:intron | 30.0% | |
| ! | TTTATAATCTAGGACATGGA+AGG | + | chr4_3:52332555-52332574 | Msa0646560:intron | 30.0% |
| ! | TTATAATCTAGGACATGGAA+GGG | + | chr4_3:52332556-52332575 | Msa0646560:intron | 30.0% |
| !!! | TTTCTTTTTGGAGCATAGTT+AGG | - | chr4_3:52332601-52332620 | None:intergenic | 30.0% |
| TCCTTAAACTGAATGTAGAT+TGG | + | chr4_3:52332672-52332691 | Msa0646560:intron | 30.0% | |
| CCTTAAACTGAATGTAGATT+GGG | + | chr4_3:52332673-52332692 | Msa0646560:intron | 30.0% | |
| CTTAAACTGAATGTAGATTG+GGG | + | chr4_3:52332674-52332693 | Msa0646560:intron | 30.0% | |
| TTTAAGCTTGTAGCTTGATA+CGG | + | chr4_3:52332969-52332988 | Msa0646560:intron | 30.0% | |
| GTATACTGTCCAATATGTTT+AGG | + | chr4_3:52333057-52333076 | Msa0646560:intron | 30.0% | |
| !!! | TGATGTTCACTTTTTTGGTA+AGG | - | chr4_3:52333345-52333364 | None:intergenic | 30.0% |
| CACAATGATCAAATATGTTC+GGG | - | chr4_3:52333424-52333443 | None:intergenic | 30.0% | |
| !! | CTGGACATTTTTCCATTTTT+AGG | + | chr4_3:52333456-52333475 | Msa0646560:intron | 30.0% |
| ! | AAAACAGATTTTCCACTGTA+TGG | + | chr4_3:52333492-52333511 | Msa0646560:intron | 30.0% |
| ! | AAACAGATTTTCCACTGTAT+GGG | + | chr4_3:52333493-52333512 | Msa0646560:intron | 30.0% |
| ATTATGTTGAAAGCAGGTAA+TGG | + | chr4_3:52333641-52333660 | Msa0646560:intron | 30.0% | |
| !!! | TGTGTGTGTGTTTCTTTTTT+TGG | + | chr4_3:52333713-52333732 | Msa0646560:intron | 30.0% |
| !!! | CTTTTTTTGGTGTACAATAG+TGG | + | chr4_3:52333726-52333745 | Msa0646560:intron | 30.0% |
| GATGGTTTATATGAGATCAA+AGG | - | chr4_3:52333766-52333785 | None:intergenic | 30.0% | |
| TTGTGTGTACATCATAGATT+AGG | - | chr4_3:52333825-52333844 | None:intergenic | 30.0% | |
| ! | GCCGAGTTTGATTTATTTAT+TGG | - | chr4_3:52333962-52333981 | None:intergenic | 30.0% |
| CTAAGGATTTATTAAAGGTC+AGG | - | chr4_3:52334046-52334065 | None:intergenic | 30.0% | |
| TTTGACTATCAGTTCTACTA+AGG | - | chr4_3:52334063-52334082 | None:intergenic | 30.0% | |
| TGAAATGTAACTTCAGCAAA+AGG | + | chr4_3:52334139-52334158 | Msa0646560:intron | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | - | chr4_3:52334211-52334230 | None:intergenic | 30.0% | |
| TTACACGGTTTAGATATCTT+GGG | + | chr4_3:52334214-52334233 | Msa0646560:intron | 30.0% | |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | chr4_3:52334546-52334565 | None:intergenic | 30.0% |
| AAGAAGAATAGATCAAATGG+AGG | + | chr4_3:52334620-52334639 | Msa0646560:intron | 30.0% | |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | - | chr4_3:52334675-52334694 | None:intergenic | 30.0% |
| ! | TTTTCGAATGGTTTCTCTAA+TGG | - | chr4_3:52334685-52334704 | None:intergenic | 30.0% |
| AACCATTCGAAAAGATTTAG+AGG | + | chr4_3:52334692-52334711 | Msa0646560:intron | 30.0% | |
| ! | TGGTTTTTGATAGAACACTA+TGG | + | chr4_3:52334736-52334755 | Msa0646560:intron | 30.0% |
| ! | TTGTTGTTGTTGTTGTTGTT+TGG | + | chr4_3:52334807-52334826 | Msa0646560:intron | 30.0% |
| ! | GGATTCGGCTTTTATAATTT+AGG | - | chr4_3:52334854-52334873 | None:intergenic | 30.0% |
| TTTATAACAGTCACTACTGA+AGG | - | chr4_3:52335044-52335063 | None:intergenic | 30.0% | |
| ! | TTATTTATGTTATTTGGGGC+TGG | + | chr4_3:52335152-52335171 | Msa0646560:intron | 30.0% |
| ! | TTCACATGACACATTCTTTT+TGG | + | chr4_3:52335323-52335342 | Msa0646560:CDS | 30.0% |
| CTCGTAAGAAAATGTATTGA+GGG | - | chr4_3:52335529-52335548 | None:intergenic | 30.0% | |
| CTACCAAGGAATAAATTGTA+AGG | - | chr4_3:52335607-52335626 | None:intergenic | 30.0% | |
| AAGCAAATAAAAACCTTCTG+CGG | + | chr4_3:52335653-52335672 | Msa0646560:CDS | 30.0% | |
| TGTATGATTGTGTTGTGTTT+GGG | + | chr4_3:52335767-52335786 | Msa0646560:intron | 30.0% | |
| ! | TACAAAGTACTTCTGTATTC+TGG | + | chr4_3:52335888-52335907 | Msa0646560:intron | 30.0% |
| AGTATAATCTATTATCCCTG+TGG | - | chr4_3:52335933-52335952 | None:intergenic | 30.0% | |
| AAATGATGCAAGCATTAATG+AGG | - | chr4_3:52335971-52335990 | None:intergenic | 30.0% | |
| TTCGTTTGTAAAAAGGTGAA+CGG | - | chr4_3:52336164-52336183 | None:intergenic | 30.0% | |
| ! | GATCGTTTTCGTTTGTAAAA+AGG | - | chr4_3:52336171-52336190 | None:intergenic | 30.0% |
| ! | TTTTCCACATCATACTATAG+AGG | + | chr4_3:52336219-52336238 | Msa0646560:intron | 30.0% |
| !!! | TCACTTTTTTGGTTCAATGA+GGG | + | chr4_3:52336276-52336295 | Msa0646560:intron | 30.0% |
| GAATTGAAATGGAAAATCAC+GGG | - | chr4_3:52336533-52336552 | None:intergenic | 30.0% | |
| ! | GTGATTTTCCATTTCAATTC+AGG | + | chr4_3:52336533-52336552 | Msa0646560:intron | 30.0% |
| CAAGCCAAATAATCATTACA+GGG | - | chr4_3:52336844-52336863 | None:intergenic | 30.0% | |
| ACAAGCCAAATAATCATTAC+AGG | - | chr4_3:52336845-52336864 | None:intergenic | 30.0% | |
| GTGATTAACATGTAATCTCT+TGG | - | chr4_3:52336890-52336909 | None:intergenic | 30.0% | |
| TCGTATAACAGTTATCATGA+AGG | + | chr4_3:52336914-52336933 | Msa0646560:intron | 30.0% | |
| ATCATGAAGGCTTCAAAAAA+TGG | + | chr4_3:52336927-52336946 | Msa0646560:CDS | 30.0% | |
| TCATGAAGGCTTCAAAAAAT+GGG | + | chr4_3:52336928-52336947 | Msa0646560:CDS | 30.0% | |
| TTCAAAAAATGGGTAGAAGT+AGG | + | chr4_3:52336938-52336957 | Msa0646560:CDS | 30.0% | |
| TACTGTTGGCAATGATTATA+TGG | - | chr4_3:52337077-52337096 | None:intergenic | 30.0% | |
| CAAATTTAGTGAATGTATCG+GGG | + | chr4_3:52337143-52337162 | Msa0646560:intron | 30.0% | |
| ATCCCATACATTATCATTGT+TGG | - | chr4_3:52337239-52337258 | None:intergenic | 30.0% | |
| ACATGGAAAATACATGGTTT+AGG | - | chr4_3:52337424-52337443 | None:intergenic | 30.0% | |
| !!! | TGTACGAAGAATTTTGATTG+TGG | + | chr4_3:52337595-52337614 | Msa0646560:three_prime_UTR | 30.0% |
| AAACCAACAGAAATTGCAAA+GGG | - | chr4_3:52337672-52337691 | None:intergenic | 30.0% | |
| AACAGAAATGTGAAGATAGG+TGG | - | chr4_3:52329900-52329919 | None:intergenic | 35.0% | |
| !! | TAATCTCATCGTTGTTTTGC+AGG | - | chr4_3:52329991-52330010 | None:intergenic | 35.0% |
| AATGTCATCAAGAGTCTTCA+TGG | + | chr4_3:52330064-52330083 | Msa0646560:CDS | 35.0% | |
| !! | AAATTTGGTTTGTTACGACG+TGG | + | chr4_3:52330180-52330199 | Msa0646560:intron | 35.0% |
| CGTGGATATAGGATATTAAG+AGG | + | chr4_3:52330198-52330217 | Msa0646560:intron | 35.0% | |
| ! | AGGAAACACTTATGCTACTT+TGG | + | chr4_3:52330244-52330263 | Msa0646560:CDS | 35.0% |
| !! | GGAAACACTTATGCTACTTT+GGG | + | chr4_3:52330245-52330264 | Msa0646560:CDS | 35.0% |
| TGTTATGCAATAGCGCTATA+GGG | - | chr4_3:52330439-52330458 | None:intergenic | 35.0% | |
| TATTGTGGTAGCACATATAG+TGG | + | chr4_3:52330635-52330654 | Msa0646560:intron | 35.0% | |
| ! | AGCACATATAGTGGAAAAGA+TGG | + | chr4_3:52330644-52330663 | Msa0646560:intron | 35.0% |
| AAAATAGACTTGGGTGGTTT+GGG | + | chr4_3:52330670-52330689 | Msa0646560:intron | 35.0% | |
| GGATTCAAATCATTAGAGGT+AGG | + | chr4_3:52330748-52330767 | Msa0646560:intron | 35.0% | |
| GGATCTAGAGATTAATGAGT+TGG | + | chr4_3:52330809-52330828 | Msa0646560:intron | 35.0% | |
| ! | TCTAGAGATTAATGAGTTGG+CGG | + | chr4_3:52330812-52330831 | Msa0646560:intron | 35.0% |
| AAATCAAACCTGAGATCTTG+TGG | - | chr4_3:52330892-52330911 | None:intergenic | 35.0% | |
| ! | TGTCGTTTGATTCATGTAGT+TGG | + | chr4_3:52331005-52331024 | Msa0646560:intron | 35.0% |
| TTTATGGTTGCAGAAAAAGC+TGG | + | chr4_3:52331137-52331156 | Msa0646560:intron | 35.0% | |
| TTATGGTTGCAGAAAAAGCT+GGG | + | chr4_3:52331138-52331157 | Msa0646560:intron | 35.0% | |
| ACAGGCTGCTAAGAATAAAT+GGG | + | chr4_3:52331188-52331207 | Msa0646560:CDS | 35.0% | |
| AAAGCAACTCATATCTAGGA+AGG | + | chr4_3:52331221-52331240 | Msa0646560:CDS | 35.0% | |
| TTGATGCACATTTGCATGTA+AGG | + | chr4_3:52331284-52331303 | Msa0646560:intron | 35.0% | |
| TCTGCTTCTTCAAATACAAC+AGG | + | chr4_3:52331478-52331497 | Msa0646560:CDS | 35.0% | |
| CTGCTTCTTCAAATACAACA+GGG | + | chr4_3:52331479-52331498 | Msa0646560:CDS | 35.0% | |
| !!! | TCTTTTTTCTTTCCTTGGGA+AGG | + | chr4_3:52331594-52331613 | Msa0646560:intron | 35.0% |
| !!! | CTTTTTTCTTTCCTTGGGAA+GGG | + | chr4_3:52331595-52331614 | Msa0646560:intron | 35.0% |
| !!! | TTTTTTCTTTCCTTGGGAAG+GGG | + | chr4_3:52331596-52331615 | Msa0646560:intron | 35.0% |
| GAATGGAAACCAGGTAAAAA+GGG | - | chr4_3:52331754-52331773 | None:intergenic | 35.0% | |
| TGAATGGAAACCAGGTAAAA+AGG | - | chr4_3:52331755-52331774 | None:intergenic | 35.0% | |
| GGTTTCTATTCATGCTTGTT+TGG | + | chr4_3:52331796-52331815 | Msa0646560:intron | 35.0% | |
| ! | TGTCATTTCATCCCTATATG+CGG | + | chr4_3:52331834-52331853 | Msa0646560:intron | 35.0% |
| ACAAGTGCATGTTACCAAAT+GGG | - | chr4_3:52331915-52331934 | None:intergenic | 35.0% | |
| AACAAGTGCATGTTACCAAA+TGG | - | chr4_3:52331916-52331935 | None:intergenic | 35.0% | |
| ! | TAACATGCACTTGTTGATTG+TGG | + | chr4_3:52331921-52331940 | Msa0646560:intron | 35.0% |
| TAGAGATAAGCATATAGGTC+AGG | + | chr4_3:52332005-52332024 | Msa0646560:intron | 35.0% | |
| !! | AGAAAGTGACAAGTTTTGTG+TGG | + | chr4_3:52332060-52332079 | Msa0646560:intron | 35.0% |
| TATGTTTGCCTCTATTTGCT+TGG | + | chr4_3:52332227-52332246 | Msa0646560:intron | 35.0% | |
| ATGTTTGCCTCTATTTGCTT+GGG | + | chr4_3:52332228-52332247 | Msa0646560:intron | 35.0% | |
| AAATTTCCCCAAGCAAATAG+AGG | - | chr4_3:52332238-52332257 | None:intergenic | 35.0% | |
| TTACCACATATTGCAAATGC+AGG | + | chr4_3:52332375-52332394 | Msa0646560:intron | 35.0% | |
| TACCACATATTGCAAATGCA+GGG | + | chr4_3:52332376-52332395 | Msa0646560:intron | 35.0% | |
| CTATGCTCCAAAAAGAAAGA+AGG | + | chr4_3:52332603-52332622 | Msa0646560:CDS | 35.0% | |
| ! | GTGACAACCTTCTTTCTTTT+TGG | - | chr4_3:52332613-52332632 | None:intergenic | 35.0% |
| TAACTCGAGATAACTTTCAG+AGG | + | chr4_3:52332638-52332657 | Msa0646560:CDS | 35.0% | |
| CCCAATCTACATTCAGTTTA+AGG | - | chr4_3:52332676-52332695 | None:intergenic | 35.0% | |
| ACTGTATTACTTTGTTGCAG+TGG | + | chr4_3:52332735-52332754 | Msa0646560:intron | 35.0% | |
| CTGTATTACTTTGTTGCAGT+GGG | + | chr4_3:52332736-52332755 | Msa0646560:intron | 35.0% | |
| TGTATTACTTTGTTGCAGTG+GGG | + | chr4_3:52332737-52332756 | Msa0646560:intron | 35.0% | |
| TATCTTCTTGCCTTTAACAG+TGG | - | chr4_3:52332837-52332856 | None:intergenic | 35.0% | |
| !! | AACATAAGCAAAAGCATCGT+CGG | + | chr4_3:52332936-52332955 | Msa0646560:intron | 35.0% |
| ! | AACAGATTTTCCACTGTATG+GGG | + | chr4_3:52333494-52333513 | Msa0646560:intron | 35.0% |
| ! | TGAGTCTTATATTTGTCCTG+TGG | + | chr4_3:52333517-52333536 | Msa0646560:intron | 35.0% |
| TAATGGTTATCTAATGCTGC+AGG | + | chr4_3:52333596-52333615 | Msa0646560:intron | 35.0% | |
| !! | ACACTAGAAAGGTATCAACA+CGG | - | chr4_3:52333678-52333697 | None:intergenic | 35.0% |
| AGGGTTACAAAGCTTTACAT+TGG | - | chr4_3:52333928-52333947 | None:intergenic | 35.0% | |
| !! | ATCAAACTCGGCACTTTTTA+AGG | + | chr4_3:52333970-52333989 | Msa0646560:intron | 35.0% |
| ATATCATACCCCAAGTTACA+CGG | + | chr4_3:52334199-52334218 | Msa0646560:intron | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | - | chr4_3:52334210-52334229 | None:intergenic | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | - | chr4_3:52334212-52334231 | None:intergenic | 35.0% | |
| GTTACACGGTTTAGATATCT+TGG | + | chr4_3:52334213-52334232 | Msa0646560:intron | 35.0% | |
| TACATCATCGTATTCAAGCT+GGG | + | chr4_3:52334274-52334293 | Msa0646560:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | + | chr4_3:52334339-52334358 | Msa0646560:intron | 35.0% |
| AACTTTCCTTTCAGCTTAAG+TGG | - | chr4_3:52334348-52334367 | None:intergenic | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | + | chr4_3:52334352-52334371 | Msa0646560:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | chr4_3:52334539-52334558 | Msa0646560:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | + | chr4_3:52334559-52334578 | Msa0646560:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | + | chr4_3:52334564-52334583 | Msa0646560:intron | 35.0% | |
| ! | GACCTCTAAATCTTTTCGAA+TGG | - | chr4_3:52334697-52334716 | None:intergenic | 35.0% |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr4_3:52334704-52334723 | Msa0646560:intron | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr4_3:52334716-52334735 | Msa0646560:intron | 35.0% |
| AAAAGCCGAATCCAAAATCT+TGG | + | chr4_3:52334861-52334880 | Msa0646560:intron | 35.0% | |
| ! | AAAATCTTGGTGCACTGAAT+CGG | + | chr4_3:52334874-52334893 | Msa0646560:intron | 35.0% |
| TACTTCAATCTGTGTTTCAG+CGG | + | chr4_3:52334899-52334918 | Msa0646560:intron | 35.0% | |
| AAGCAAGAAGCAATGAATCA+TGG | - | chr4_3:52335134-52335153 | None:intergenic | 35.0% | |
| ! | ATGCTTTAAATGGCAGTTTC+TGG | + | chr4_3:52335256-52335275 | Msa0646560:intron | 35.0% |
| ! | CATGACACATTCTTTTTGGA+AGG | + | chr4_3:52335327-52335346 | Msa0646560:CDS | 35.0% |
| GTGAAGCAAATTCATGAATC+TGG | + | chr4_3:52335470-52335489 | Msa0646560:CDS | 35.0% | |
| AAGCAAATTCATGAATCTGG+TGG | + | chr4_3:52335473-52335492 | Msa0646560:CDS | 35.0% | |
| CCTCGTAAGAAAATGTATTG+AGG | - | chr4_3:52335530-52335549 | None:intergenic | 35.0% | |
| ! | CCTCAATACATTTTCTTACG+AGG | + | chr4_3:52335527-52335546 | Msa0646560:intron | 35.0% |
| AGTCATATGCATATCTACCA+AGG | - | chr4_3:52335621-52335640 | None:intergenic | 35.0% | |
| TTGGTAGATATGCATATGAC+TGG | + | chr4_3:52335620-52335639 | Msa0646560:intron | 35.0% | |
| GTGTATGATTGTGTTGTGTT+TGG | + | chr4_3:52335766-52335785 | Msa0646560:intron | 35.0% | |
| GTATGATTGTGTTGTGTTTG+GGG | + | chr4_3:52335768-52335787 | Msa0646560:intron | 35.0% | |
| GAAGATAATAGGATGCTCAA+TGG | - | chr4_3:52335794-52335813 | None:intergenic | 35.0% | |
| AATCATAATTGGACCATCGA+AGG | - | chr4_3:52336196-52336215 | None:intergenic | 35.0% | |
| ATTGAACCAAAAAAGTGACG+CGG | - | chr4_3:52336274-52336293 | None:intergenic | 35.0% | |
| !!! | GTCACTTTTTTGGTTCAATG+AGG | + | chr4_3:52336275-52336294 | Msa0646560:intron | 35.0% |
| !!! | CACTTTTTTGGTTCAATGAG+GGG | + | chr4_3:52336277-52336296 | Msa0646560:intron | 35.0% |
| AACAGCCTCTTGTGTAAAAT+AGG | + | chr4_3:52336365-52336384 | Msa0646560:intron | 35.0% | |
| ACAGCCTCTTGTGTAAAATA+GGG | + | chr4_3:52336366-52336385 | Msa0646560:intron | 35.0% | |
| ! | CTTACCCTATTTTACACAAG+AGG | - | chr4_3:52336373-52336392 | None:intergenic | 35.0% |
| CTCTTGTGTAAAATAGGGTA+AGG | + | chr4_3:52336371-52336390 | Msa0646560:intron | 35.0% | |
| TAAAAGTAAAAAGGGCAACC+CGG | - | chr4_3:52336463-52336482 | None:intergenic | 35.0% | |
| !! | GGTTGCCCTTTTTACTTTTA+TGG | + | chr4_3:52336463-52336482 | Msa0646560:intron | 35.0% |
| ! | ACTTTTATGGTTCAATGCAC+TGG | + | chr4_3:52336476-52336495 | Msa0646560:intron | 35.0% |
| ! | CTTTTATGGTTCAATGCACT+GGG | + | chr4_3:52336477-52336496 | Msa0646560:intron | 35.0% |
| ! | TTTTATGGTTCAATGCACTG+GGG | + | chr4_3:52336478-52336497 | Msa0646560:intron | 35.0% |
| ATACAAGGCCTGAATTGAAA+TGG | - | chr4_3:52336544-52336563 | None:intergenic | 35.0% | |
| GACTCCCTGTAATGATTATT+TGG | + | chr4_3:52336837-52336856 | Msa0646560:intron | 35.0% | |
| AAGATGTCCAAGTTATTGCA+TGG | + | chr4_3:52337011-52337030 | Msa0646560:CDS | 35.0% | |
| AGATGTCCAAGTTATTGCAT+GGG | + | chr4_3:52337012-52337031 | Msa0646560:CDS | 35.0% | |
| CAATGATTATATGGCGTTCT+CGG | - | chr4_3:52337068-52337087 | None:intergenic | 35.0% | |
| !! | ATCATTGTTGGCCTGTTTTT+AGG | - | chr4_3:52337227-52337246 | None:intergenic | 35.0% |
| ! | AGGCCAACAATGATAATGTA+TGG | + | chr4_3:52337233-52337252 | Msa0646560:intron | 35.0% |
| ! | GGCCAACAATGATAATGTAT+GGG | + | chr4_3:52337234-52337253 | Msa0646560:intron | 35.0% |
| GATAACATCAGAGATCTCTT+CGG | + | chr4_3:52337260-52337279 | Msa0646560:CDS | 35.0% | |
| AATCCCATAACAATACCTTG+TGG | - | chr4_3:52337286-52337305 | None:intergenic | 35.0% | |
| AGGGTGTAAAACTTGATTGA+TGG | + | chr4_3:52337358-52337377 | Msa0646560:intron | 35.0% | |
| GGGTGTAAAACTTGATTGAT+GGG | + | chr4_3:52337359-52337378 | Msa0646560:intron | 35.0% | |
| !!! | TTTCCATGTTTTTTTGCAGG+TGG | + | chr4_3:52337435-52337454 | Msa0646560:intron | 35.0% |
| CCACATGTATTGCTTGATAT+TGG | - | chr4_3:52337561-52337580 | None:intergenic | 35.0% | |
| CCAATATCAAGCAATACATG+TGG | + | chr4_3:52337558-52337577 | Msa0646560:three_prime_UTR | 35.0% | |
| AACCAACAGAAATTGCAAAG+GGG | - | chr4_3:52337671-52337690 | None:intergenic | 35.0% | |
| CAAACCAACAGAAATTGCAA+AGG | - | chr4_3:52337673-52337692 | None:intergenic | 35.0% | |
| GGGATTGTTCAATAGGTAAA+AGG | - | chr4_3:52337743-52337762 | None:intergenic | 35.0% | |
| ! | TGAACGTTTTTCTTCACGAG+CGG | - | chr4_3:52329864-52329883 | None:intergenic | 40.0% |
| GCGAACAGAAATGTGAAGAT+AGG | - | chr4_3:52329903-52329922 | None:intergenic | 40.0% | |
| TGACATTGACGATTTCGTTG+TGG | - | chr4_3:52330051-52330070 | None:intergenic | 40.0% | |
| ! | GTTTGTTACGACGTGGATAT+AGG | + | chr4_3:52330187-52330206 | Msa0646560:intron | 40.0% |
| AGGATATTAAGAGGGAGACA+TGG | + | chr4_3:52330207-52330226 | Msa0646560:intron | 40.0% | |
| GGATATTAAGAGGGAGACAT+GGG | + | chr4_3:52330208-52330227 | Msa0646560:intron | 40.0% | |
| ACATGGGTGTTAACTGATGA+AGG | + | chr4_3:52330224-52330243 | Msa0646560:CDS | 40.0% | |
| ! | TTCATCTCTGGAGATACCTT+CGG | - | chr4_3:52330306-52330325 | None:intergenic | 40.0% |
| TATCTCCAGAGATGAACTTC+AGG | + | chr4_3:52330310-52330329 | Msa0646560:CDS | 40.0% | |
| AACTACCTGAAGTTCATCTC+TGG | - | chr4_3:52330318-52330337 | None:intergenic | 40.0% | |
| GTATGTGTTCGGTTAAGTAG+CGG | + | chr4_3:52330404-52330423 | Msa0646560:intron | 40.0% | |
| CTGTTATGCAATAGCGCTAT+AGG | - | chr4_3:52330440-52330459 | None:intergenic | 40.0% | |
| GCGCTATTGCATAACAGAAT+TGG | + | chr4_3:52330443-52330462 | Msa0646560:intron | 40.0% | |
| GTGTGTTAGAGTCAGTATTG+TGG | + | chr4_3:52330620-52330639 | Msa0646560:intron | 40.0% | |
| TGGTAGAAAATAGACTTGGG+TGG | + | chr4_3:52330664-52330683 | Msa0646560:intron | 40.0% | |
| GAAAATAGACTTGGGTGGTT+TGG | + | chr4_3:52330669-52330688 | Msa0646560:intron | 40.0% | |
| GCATTGTGGATTCTGTAGTA+AGG | + | chr4_3:52330706-52330725 | Msa0646560:intron | 40.0% | |
| GGATTCTGTAGTAAGGAGAT+TGG | + | chr4_3:52330713-52330732 | Msa0646560:intron | 40.0% | |
| AGTAAGGAGATTGGATCAGA+TGG | + | chr4_3:52330722-52330741 | Msa0646560:intron | 40.0% | |
| GAGGGGATTCAAATCATTAG+AGG | + | chr4_3:52330744-52330763 | Msa0646560:intron | 40.0% | |
| !! | ATCTCAGGTTTGATTTTCCC+CGG | + | chr4_3:52330896-52330915 | Msa0646560:intron | 40.0% |
| GTAAACTAGCCCACCTAAAT+TGG | - | chr4_3:52330924-52330943 | None:intergenic | 40.0% | |
| ! | AAATGAGTTGGCGAAAGACA+TGG | + | chr4_3:52330962-52330981 | Msa0646560:intron | 40.0% |
| TACGTGTTTGTGTGCTTCAT+AGG | + | chr4_3:52331093-52331112 | Msa0646560:intron | 40.0% | |
| CAAGCTATCTTGAAGACTGA+AGG | - | chr4_3:52331165-52331184 | None:intergenic | 40.0% | |
| CACAGGCTGCTAAGAATAAA+TGG | + | chr4_3:52331187-52331206 | Msa0646560:CDS | 40.0% | |
| TGGGAAAGCAACTCATATCT+AGG | + | chr4_3:52331217-52331236 | Msa0646560:CDS | 40.0% | |
| TTGGACCTTCAACCAGAAAT+TGG | - | chr4_3:52331435-52331454 | None:intergenic | 40.0% | |
| TGACTCTATCTTCCACATCT+TGG | - | chr4_3:52331454-52331473 | None:intergenic | 40.0% | |
| TCTTCAAATACAACAGGGAC+AGG | + | chr4_3:52331484-52331503 | Msa0646560:CDS | 40.0% | |
| GTTGAAACTTGAGAGGGTAA+CGG | + | chr4_3:52331554-52331573 | Msa0646560:intron | 40.0% | |
| ! | TTTTTCTTTCCTTGGGAAGG+GGG | + | chr4_3:52331597-52331616 | Msa0646560:intron | 40.0% |
| ! | AGTCAATCACCCTTTTTACC+TGG | + | chr4_3:52331742-52331761 | Msa0646560:intron | 40.0% |
| TTCAACGTTGAATGGAAACC+AGG | - | chr4_3:52331763-52331782 | None:intergenic | 40.0% | |
| GTTTCCATTCAACGTTGAAG+AGG | + | chr4_3:52331764-52331783 | Msa0646560:intron | 40.0% | |
| ATTTCATCCCTATATGCGGT+AGG | + | chr4_3:52331838-52331857 | Msa0646560:intron | 40.0% | |
| GCAATTTCCTACCGCATATA+GGG | - | chr4_3:52331848-52331867 | None:intergenic | 40.0% | |
| AGCAATTTCCTACCGCATAT+AGG | - | chr4_3:52331849-52331868 | None:intergenic | 40.0% | |
| ATATGCGGTAGGAAATTGCT+AGG | + | chr4_3:52331849-52331868 | Msa0646560:intron | 40.0% | |
| TGTTGATACACACACCCATT+TGG | + | chr4_3:52331898-52331917 | Msa0646560:intron | 40.0% | |
| GTGAGATAGGTATAGGAAGT+TGG | + | chr4_3:52332105-52332124 | Msa0646560:intron | 40.0% | |
| GATAGGTATAGGAAGTTGGA+AGG | + | chr4_3:52332109-52332128 | Msa0646560:intron | 40.0% | |
| TATGACTTATGAGGTGTGCA+TGG | + | chr4_3:52332162-52332181 | Msa0646560:intron | 40.0% | |
| ! | ATGGACTGCACTCTATTTCA+TGG | + | chr4_3:52332181-52332200 | Msa0646560:intron | 40.0% |
| TGGACTGCACTCTATTTCAT+GGG | + | chr4_3:52332182-52332201 | Msa0646560:intron | 40.0% | |
| TGTTTGCCTCTATTTGCTTG+GGG | + | chr4_3:52332229-52332248 | Msa0646560:intron | 40.0% | |
| ATGAGATATGCAGAACTCAC+AGG | - | chr4_3:52332347-52332366 | None:intergenic | 40.0% | |
| ATATTGCAAATGCAGGGCAT+TGG | + | chr4_3:52332382-52332401 | Msa0646560:intron | 40.0% | |
| ! | AAGGGTTACTCGGTGAAAAA+GGG | + | chr4_3:52332574-52332593 | Msa0646560:CDS | 40.0% |
| AACTGAATGTAGATTGGGGA+TGG | + | chr4_3:52332678-52332697 | Msa0646560:intron | 40.0% | |
| GAGTACAACTACACTGCTAA+AGG | + | chr4_3:52332783-52332802 | Msa0646560:CDS | 40.0% | |
| CAGTCTTCATCCACTGTTAA+AGG | + | chr4_3:52332824-52332843 | Msa0646560:intron | 40.0% | |
| TTCCTCCTTTCCCCAATTTA+CGG | + | chr4_3:52332876-52332895 | Msa0646560:intron | 40.0% | |
| CGTAAAGTTCCCGTAAATTG+GGG | - | chr4_3:52332889-52332908 | None:intergenic | 40.0% | |
| CCGTAAAGTTCCCGTAAATT+GGG | - | chr4_3:52332890-52332909 | None:intergenic | 40.0% | |
| CCCAATTTACGGGAACTTTA+CGG | + | chr4_3:52332887-52332906 | Msa0646560:intron | 40.0% | |
| TCCGTAAAGTTCCCGTAAAT+TGG | - | chr4_3:52332891-52332910 | None:intergenic | 40.0% | |
| TTGTTCGCGAATGTGAAGAT+TGG | - | chr4_3:52333208-52333227 | None:intergenic | 40.0% | |
| TTTGAGCCCGTACCTAAAAA+TGG | - | chr4_3:52333471-52333490 | None:intergenic | 40.0% | |
| AATAGACATCAAGCTTCCAC+AGG | - | chr4_3:52333536-52333555 | None:intergenic | 40.0% | |
| TGGAAGCTTGATGTCTATTG+CGG | + | chr4_3:52333537-52333556 | Msa0646560:intron | 40.0% | |
| TATCTAATGCTGCAGGTTTG+AGG | + | chr4_3:52333603-52333622 | Msa0646560:intron | 40.0% | |
| ! | ATGTTGAAAGCAGGTAATGG+TGG | + | chr4_3:52333644-52333663 | Msa0646560:intron | 40.0% |
| CACAGAGACAAACACTAGAA+AGG | - | chr4_3:52333689-52333708 | None:intergenic | 40.0% | |
| ATTAGGAAAGCCACTAGGAT+TGG | - | chr4_3:52333808-52333827 | None:intergenic | 40.0% | |
| CATAGATTAGGAAAGCCACT+AGG | - | chr4_3:52333813-52333832 | None:intergenic | 40.0% | |
| TGATTTATTTATTGGGGGGC+AGG | - | chr4_3:52333954-52333973 | None:intergenic | 40.0% | |
| !! | AAACTCGGCACTTTTTAAGG+AGG | + | chr4_3:52333973-52333992 | Msa0646560:intron | 40.0% |
| AACTTCAGCAAAAGGAGAAG+TGG | + | chr4_3:52334147-52334166 | Msa0646560:intron | 40.0% | |
| ACTTCAGCAAAAGGAGAAGT+GGG | + | chr4_3:52334148-52334167 | Msa0646560:intron | 40.0% | |
| TCTTGGGTCCATAGTACAAA+AGG | + | chr4_3:52334230-52334249 | Msa0646560:intron | 40.0% | |
| ! | TTCTCCGTCCTTTTGTACTA+TGG | - | chr4_3:52334241-52334260 | None:intergenic | 40.0% |
| GTACATCATCGTATTCAAGC+TGG | + | chr4_3:52334273-52334292 | Msa0646560:intron | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | + | chr4_3:52334481-52334500 | Msa0646560:intron | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | chr4_3:52334645-52334664 | Msa0646560:intron | 40.0% | |
| ! | GTGCACCAAGATTTTGGATT+CGG | - | chr4_3:52334869-52334888 | None:intergenic | 40.0% |
| ! | GATTCAGTGCACCAAGATTT+TGG | - | chr4_3:52334875-52334894 | None:intergenic | 40.0% |
| ACTTCAATCTGTGTTTCAGC+GGG | + | chr4_3:52334900-52334919 | Msa0646560:intron | 40.0% | |
| AAGGAACCTTTCGAAGAACA+CGG | - | chr4_3:52335025-52335044 | None:intergenic | 40.0% | |
| GTGTGACATGTACTCAAGAT+GGG | - | chr4_3:52335398-52335417 | None:intergenic | 40.0% | |
| TGTGTGACATGTACTCAAGA+TGG | - | chr4_3:52335399-52335418 | None:intergenic | 40.0% | |
| !! | GGCAGTTTCTTTGTTGTTGA+AGG | - | chr4_3:52335431-52335450 | None:intergenic | 40.0% |
| TGCCTGAAGATTATGTTCAG+CGG | + | chr4_3:52335447-52335466 | Msa0646560:CDS | 40.0% | |
| ! | AATCTGGTGGATATGAGTCT+AGG | + | chr4_3:52335486-52335505 | Msa0646560:CDS | 40.0% |
| ! | ATCTGGTGGATATGAGTCTA+GGG | + | chr4_3:52335487-52335506 | Msa0646560:CDS | 40.0% |
| TGCATATGACTGGAAAAGAG+AGG | + | chr4_3:52335630-52335649 | Msa0646560:CDS | 40.0% | |
| TGTATTCCGAAATGAAGCAG+TGG | + | chr4_3:52336056-52336075 | Msa0646560:CDS | 40.0% | |
| ! | TAGAAGGTACGTGAGCTATT+AGG | + | chr4_3:52336109-52336128 | Msa0646560:intron | 40.0% |
| TACGTGAGCTATTAGGTTAC+TGG | + | chr4_3:52336116-52336135 | Msa0646560:intron | 40.0% | |
| ACGTGAGCTATTAGGTTACT+GGG | + | chr4_3:52336117-52336136 | Msa0646560:intron | 40.0% | |
| TCCACATCATACTATAGAGG+AGG | + | chr4_3:52336222-52336241 | Msa0646560:intron | 40.0% | |
| ACCTCCTCTATAGTATGATG+TGG | - | chr4_3:52336226-52336245 | None:intergenic | 40.0% | |
| ACATCATACTATAGAGGAGG+TGG | + | chr4_3:52336225-52336244 | Msa0646560:intron | 40.0% | |
| CATCATACTATAGAGGAGGT+GGG | + | chr4_3:52336226-52336245 | Msa0646560:intron | 40.0% | |
| ATCATACTATAGAGGAGGTG+GGG | + | chr4_3:52336227-52336246 | Msa0646560:intron | 40.0% | |
| !!! | TTTTTGCCGCGTCACTTTTT+TGG | + | chr4_3:52336265-52336284 | Msa0646560:intron | 40.0% |
| GTTGTTGTCATGTGACTGAA+AGG | + | chr4_3:52336322-52336341 | Msa0646560:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr4_3:52336397-52336416 | Msa0646560:intron | 40.0% | |
| TTTATGGTTCAATGCACTGG+GGG | + | chr4_3:52336479-52336498 | Msa0646560:intron | 40.0% | |
| CTCACTCTCTGTGACTTAAT+AGG | + | chr4_3:52336575-52336594 | Msa0646560:CDS | 40.0% | |
| CATGATTTCTTCTCACGCTT+AGG | + | chr4_3:52336605-52336624 | Msa0646560:CDS | 40.0% | |
| AGCAGGTTTGAATTTCAGCT+TGG | - | chr4_3:52336775-52336794 | None:intergenic | 40.0% | |
| ! | TCTGTGTATGGATTGTAAGC+AGG | - | chr4_3:52336792-52336811 | None:intergenic | 40.0% |
| ! | AACCTAGCATGGAGATTTTC+AGG | + | chr4_3:52336811-52336830 | Msa0646560:CDS | 40.0% |
| TGTTCAGACCTGAAATGTTG+CGG | + | chr4_3:52336972-52336991 | Msa0646560:CDS | 40.0% | |
| GCAATAACTTGGACATCTTC+AGG | - | chr4_3:52337010-52337029 | None:intergenic | 40.0% | |
| GATGTCCAAGTTATTGCATG+GGG | + | chr4_3:52337013-52337032 | Msa0646560:CDS | 40.0% | |
| AAAGTCCCCATGCAATAACT+TGG | - | chr4_3:52337021-52337040 | None:intergenic | 40.0% | |
| GATCCACCTGCAAAAAAACA+TGG | - | chr4_3:52337441-52337460 | None:intergenic | 40.0% | |
| !!! | GTTTTTTTGCAGGTGGATCT+TGG | + | chr4_3:52337442-52337461 | Msa0646560:intron | 40.0% |
| ! | CGACTTGGAATTGAATGAAG+TGG | + | chr4_3:52337490-52337509 | Msa0646560:exon | 40.0% |
| TTCCCCTTTGCAATTTCTGT+TGG | + | chr4_3:52337666-52337685 | Msa0646560:three_prime_UTR | 40.0% | |
| GCGGTTCTTAGGTTTGAGAA+TGG | + | chr4_3:52329943-52329962 | Msa0646560:exon | 45.0% | |
| ATGGCAGAAGAAGCAGTTCT+TGG | + | chr4_3:52329962-52329981 | Msa0646560:CDS | 45.0% | |
| TTTCAGATACGTCGATGCTG+TGG | + | chr4_3:52330087-52330106 | Msa0646560:CDS | 45.0% | |
| ! | TCATCTCTGGAGATACCTTC+GGG | - | chr4_3:52330305-52330324 | None:intergenic | 45.0% |
| !! | GCACTTAGAGAGAAGCATTG+TGG | + | chr4_3:52330692-52330711 | Msa0646560:intron | 45.0% |
| AAGGAGATTGGATCAGATGG+AGG | + | chr4_3:52330725-52330744 | Msa0646560:intron | 45.0% | |
| AGGAGATTGGATCAGATGGA+GGG | + | chr4_3:52330726-52330745 | Msa0646560:intron | 45.0% | |
| TCAAACCTGAGATCTTGTGG+AGG | - | chr4_3:52330889-52330908 | None:intergenic | 45.0% | |
| !! | ATTTTCCCCGGTGCCAATTT+AGG | + | chr4_3:52330908-52330927 | Msa0646560:intron | 45.0% |
| ATGTAGTTGGCACCACTTAG+TGG | + | chr4_3:52331018-52331037 | Msa0646560:intron | 45.0% | |
| TGTAGTTGGCACCACTTAGT+GGG | + | chr4_3:52331019-52331038 | Msa0646560:intron | 45.0% | |
| ! | CTTCAAGATAGCTTGTGCAC+AGG | + | chr4_3:52331170-52331189 | Msa0646560:CDS | 45.0% |
| GGCTGCTAAGAATAAATGGG+TGG | + | chr4_3:52331191-52331210 | Msa0646560:CDS | 45.0% | |
| GTCTCCTCTTCAACGTTGAA+TGG | - | chr4_3:52331771-52331790 | None:intergenic | 45.0% | |
| ACGTTGAAGAGGAGACTTGA+TGG | + | chr4_3:52331775-52331794 | Msa0646560:intron | 45.0% | |
| ! | CACTTGTTGATTGTGGCTGA+CGG | + | chr4_3:52331928-52331947 | Msa0646560:intron | 45.0% |
| TAGGTCAGGTCTGTACTCTT+TGG | + | chr4_3:52332019-52332038 | Msa0646560:intron | 45.0% | |
| CACTCTATTTCATGGGTGAG+TGG | + | chr4_3:52332189-52332208 | Msa0646560:intron | 45.0% | |
| ATTTCATGGGTGAGTGGTGA+TGG | + | chr4_3:52332195-52332214 | Msa0646560:intron | 45.0% | |
| TGCCCTGCATTTGCAATATG+TGG | - | chr4_3:52332381-52332400 | None:intergenic | 45.0% | |
| TAGGACATGGAAGGGTTACT+CGG | + | chr4_3:52332564-52332583 | Msa0646560:intron | 45.0% | |
| ! | GAAGGGTTACTCGGTGAAAA+AGG | + | chr4_3:52332573-52332592 | Msa0646560:CDS | 45.0% |
| TGAATGTAGATTGGGGATGG+CGG | + | chr4_3:52332681-52332700 | Msa0646560:intron | 45.0% | |
| ATTGGGGAAAGGAGGAAGAA+GGG | - | chr4_3:52332873-52332892 | None:intergenic | 45.0% | |
| AATTGGGGAAAGGAGGAAGA+AGG | - | chr4_3:52332874-52332893 | None:intergenic | 45.0% | |
| TCCTCCTTTCCCCAATTTAC+GGG | + | chr4_3:52332877-52332896 | Msa0646560:intron | 45.0% | |
| AGTTCCCGTAAATTGGGGAA+AGG | - | chr4_3:52332884-52332903 | None:intergenic | 45.0% | |
| ACGGGAACTTTACGGACAAT+AGG | + | chr4_3:52332895-52332914 | Msa0646560:intron | 45.0% | |
| ATAAGACTCACCCCATACAG+TGG | - | chr4_3:52333507-52333526 | None:intergenic | 45.0% | |
| !! | TAGGATTGGACTAGTGGTGA+GGG | - | chr4_3:52333794-52333813 | None:intergenic | 45.0% |
| TTTATTTATTGGGGGGCAGG+AGG | - | chr4_3:52333951-52333970 | None:intergenic | 45.0% | |
| TCTACCTTGGAGGTGAAAGT+TGG | + | chr4_3:52334171-52334190 | Msa0646560:intron | 45.0% | |
| ATCTCCAACTTTCACCTCCA+AGG | - | chr4_3:52334178-52334197 | None:intergenic | 45.0% | |
| GGGTCCATAGTACAAAAGGA+CGG | + | chr4_3:52334234-52334253 | Msa0646560:intron | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | + | chr4_3:52334277-52334296 | Msa0646560:intron | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | + | chr4_3:52334286-52334305 | Msa0646560:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | + | chr4_3:52334300-52334319 | Msa0646560:intron | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | - | chr4_3:52334319-52334338 | None:intergenic | 45.0% | |
| GTTAGACCGGCAATGTTGTA+TGG | + | chr4_3:52334381-52334400 | Msa0646560:intron | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | + | chr4_3:52334386-52334405 | Msa0646560:intron | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | - | chr4_3:52334390-52334409 | None:intergenic | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | + | chr4_3:52334394-52334413 | Msa0646560:intron | 45.0% | |
| ! | GTTGTATGGTACGGAGTGTT+GGG | + | chr4_3:52334395-52334414 | Msa0646560:intron | 45.0% |
| CGAGAGTAAAGTAAGCGTAG+CGG | + | chr4_3:52334434-52334453 | Msa0646560:intron | 45.0% | |
| TGACACCATTAGAGAGAGAG+TGG | + | chr4_3:52334512-52334531 | Msa0646560:intron | 45.0% | |
| GACACCATTAGAGAGAGAGT+GGG | + | chr4_3:52334513-52334532 | Msa0646560:intron | 45.0% | |
| ACACCATTAGAGAGAGAGTG+GGG | + | chr4_3:52334514-52334533 | Msa0646560:intron | 45.0% | |
| CTTCTTACAACGGCATCTAC+AGG | - | chr4_3:52334606-52334625 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr4_3:52334629-52334648 | Msa0646560:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr4_3:52334639-52334658 | Msa0646560:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4_3:52331031-52331050 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4_3:52331032-52331051 | None:intergenic | 45.0% |
| ATCTGTGTTTCAGCGGGTAT+AGG | + | chr4_3:52334906-52334925 | Msa0646560:intron | 45.0% | |
| AGGAACCTTTCGAAGAACAC+GGG | - | chr4_3:52335024-52335043 | None:intergenic | 45.0% | |
| ATCACGAGCAGGATGTTGTT+GGG | - | chr4_3:52335304-52335323 | None:intergenic | 45.0% | |
| AATCACGAGCAGGATGTTGT+TGG | - | chr4_3:52335305-52335324 | None:intergenic | 45.0% | |
| GCCTGAAGATTATGTTCAGC+GGG | + | chr4_3:52335448-52335467 | Msa0646560:CDS | 45.0% | |
| ACCCGCTGAACATAATCTTC+AGG | - | chr4_3:52335452-52335471 | None:intergenic | 45.0% | |
| ! | TCTGGTGGATATGAGTCTAG+GGG | + | chr4_3:52335488-52335507 | Msa0646560:CDS | 45.0% |
| GGAAGAAACAGCAGTTGTGT+GGG | - | chr4_3:52335680-52335699 | None:intergenic | 45.0% | |
| !! | ACACAACTGCTGTTTCTTCC+CGG | + | chr4_3:52335680-52335699 | Msa0646560:CDS | 45.0% |
| CTATTATCCCTGTGGATGCA+AGG | - | chr4_3:52335925-52335944 | None:intergenic | 45.0% | |
| TACGGTCCACTGCTTCATTT+CGG | - | chr4_3:52336065-52336084 | None:intergenic | 45.0% | |
| GGAACTCAGCAAGATGTGTA+CGG | - | chr4_3:52336083-52336102 | None:intergenic | 45.0% | |
| GCTGAGTTCCATCAGATAGA+AGG | + | chr4_3:52336093-52336112 | Msa0646560:CDS | 45.0% | |
| CTCACGTACCTTCTATCTGA+TGG | - | chr4_3:52336104-52336123 | None:intergenic | 45.0% | |
| CATAATTGGACCATCGAAGG+TGG | - | chr4_3:52336193-52336212 | None:intergenic | 45.0% | |
| TCATACTATAGAGGAGGTGG+GGG | + | chr4_3:52336228-52336247 | Msa0646560:intron | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | + | chr4_3:52336328-52336347 | Msa0646560:intron | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | + | chr4_3:52336329-52336348 | Msa0646560:intron | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr4_3:52336362-52336381 | None:intergenic | 45.0% |
| GCTGCGTACAATACACCAAA+TGG | + | chr4_3:52336393-52336412 | Msa0646560:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr4_3:52336396-52336415 | Msa0646560:intron | 45.0% | |
| TGAGTCCTCGATCACATACA+AGG | - | chr4_3:52336559-52336578 | None:intergenic | 45.0% | |
| TCCATACACAGAACCTAGCA+TGG | + | chr4_3:52336800-52336819 | Msa0646560:CDS | 45.0% | |
| TCCATGCTAGGTTCTGTGTA+TGG | - | chr4_3:52336804-52336823 | None:intergenic | 45.0% | |
| CACCTGAAAATCTCCATGCT+AGG | - | chr4_3:52336816-52336835 | None:intergenic | 45.0% | |
| TGGGTAGAAGTAGGAAACTC+TGG | + | chr4_3:52336947-52336966 | Msa0646560:CDS | 45.0% | |
| ACATCTTCAGGAAGTCCCAT+CGG | - | chr4_3:52336998-52337017 | None:intergenic | 45.0% | |
| CATGGGGACTTTCTCTTGAA+AGG | + | chr4_3:52337029-52337048 | Msa0646560:CDS | 45.0% | |
| !! | TCGGCCACAAGGTATTGTTA+TGG | + | chr4_3:52337279-52337298 | Msa0646560:intron | 45.0% |
| !! | CGGCCACAAGGTATTGTTAT+GGG | + | chr4_3:52337280-52337299 | Msa0646560:intron | 45.0% |
| !!! | TAATTAATATTTTATAATCT+AGG | + | chr4_3:52332545-52332564 | Msa0646560:intron | 5.0% |
| !!! | ATATATTATGATTTTAATTA+TGG | + | chr4_3:52333133-52333152 | Msa0646560:intron | 5.0% |
| !! | AAAACATATTTAATAAATTA+TGG | + | chr4_3:52333368-52333387 | Msa0646560:intron | 5.0% |
| !!! | TTATATGTTTATAATTTTAA+AGG | + | chr4_3:52335849-52335868 | Msa0646560:intron | 5.0% |
| AGAACCGCCGCACAATAGAA+CGG | - | chr4_3:52329931-52329950 | None:intergenic | 50.0% | |
| TCTATTGTGCGGCGGTTCTT+AGG | + | chr4_3:52329932-52329951 | Msa0646560:five_prime_UTR | 50.0% | |
| GGTGAATTTGCAGCTGAACG+TGG | + | chr4_3:52330019-52330038 | Msa0646560:CDS | 50.0% | |
| !!! | ATTTTGGCTATTCCGCCCGA+AGG | + | chr4_3:52330287-52330306 | Msa0646560:CDS | 50.0% |
| GGAGATTGGATCAGATGGAG+GGG | + | chr4_3:52330727-52330746 | Msa0646560:intron | 50.0% | |
| ACCACCAGAACAACCCAAGT+GGG | - | chr4_3:52330840-52330859 | None:intergenic | 50.0% | |
| ! | TTGGGTTGTTCTGGTGGTGT+TGG | + | chr4_3:52330842-52330861 | Msa0646560:intron | 50.0% |
| !! | GTGGTGTTGGCTTACGACTT+TGG | + | chr4_3:52330855-52330874 | Msa0646560:intron | 50.0% |
| GTGTTCCTCCACAAGATCTC+AGG | + | chr4_3:52330881-52330900 | Msa0646560:intron | 50.0% | |
| TAGCCCACCTAAATTGGCAC+CGG | - | chr4_3:52330918-52330937 | None:intergenic | 50.0% | |
| TGGCACCACTTAGTGGGATA+AGG | + | chr4_3:52331025-52331044 | Msa0646560:intron | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4_3:52331033-52331052 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr4_3:52331030-52331049 | Msa0646560:intron | 50.0% | |
| CTGGTTGAAGGTCCAAGATG+TGG | + | chr4_3:52331439-52331458 | Msa0646560:intron | 50.0% | |
| ! | AGGGTAACGGTAGAAAGAGC+TGG | + | chr4_3:52331567-52331586 | Msa0646560:intron | 50.0% |
| TACTTTGTTGCAGTGGGGAG+TGG | + | chr4_3:52332742-52332761 | Msa0646560:intron | 50.0% | |
| GCTAAAGGTCAGCCTCTTGA+AGG | + | chr4_3:52332798-52332817 | Msa0646560:CDS | 50.0% | |
| AAAGGTCAGCCTCTTGAAGG+TGG | + | chr4_3:52332801-52332820 | Msa0646560:CDS | 50.0% | |
| TGAAGACTGCCACCTTCAAG+AGG | - | chr4_3:52332813-52332832 | None:intergenic | 50.0% | |
| GGAGGAAGAAGGGTGAACAA+GGG | - | chr4_3:52332863-52332882 | None:intergenic | 50.0% | |
| AGGAGGAAGAAGGGTGAACA+AGG | - | chr4_3:52332864-52332883 | None:intergenic | 50.0% | |
| TCCCGTAAATTGGGGAAAGG+AGG | - | chr4_3:52332881-52332900 | None:intergenic | 50.0% | |
| !! | AGGATTGGACTAGTGGTGAG+GGG | - | chr4_3:52333793-52333812 | None:intergenic | 50.0% |
| !! | CTAGGATTGGACTAGTGGTG+AGG | - | chr4_3:52333795-52333814 | None:intergenic | 50.0% |
| CACCACTAGTCCAATCCTAG+TGG | + | chr4_3:52333795-52333814 | Msa0646560:intron | 50.0% | |
| ! | AGCCACTAGGATTGGACTAG+TGG | - | chr4_3:52333800-52333819 | None:intergenic | 50.0% |
| ACTCCGTCTTGCTTCTACTC+AGG | - | chr4_3:52334116-52334135 | None:intergenic | 50.0% | |
| AAGGAGAAGTGGGTCTACCT+TGG | + | chr4_3:52334158-52334177 | Msa0646560:intron | 50.0% | |
| CTATCGGACAGCAGTTAGAC+CGG | + | chr4_3:52334368-52334387 | Msa0646560:intron | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | + | chr4_3:52334442-52334461 | Msa0646560:intron | 50.0% |
| AGGATGTTGCGTTGGATGAG+TGG | + | chr4_3:52334462-52334481 | Msa0646560:intron | 50.0% | |
| CACCATTAGAGAGAGAGTGG+GGG | + | chr4_3:52334515-52334534 | Msa0646560:intron | 50.0% | |
| TACCCCCACTCTCTCTCTAA+TGG | - | chr4_3:52334520-52334539 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr4_3:52334781-52334800 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4_3:52331033-52331052 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr4_3:52331030-52331049 | Msa0646560:intron | 50.0% | |
| GTTTCAGCGGGTATAGGATG+AGG | + | chr4_3:52334912-52334931 | Msa0646560:intron | 50.0% | |
| GCGGGTATAGGATGAGGTTA+TGG | + | chr4_3:52334918-52334937 | Msa0646560:intron | 50.0% | |
| ATGTTGTTGGGGCTGGAACA+AGG | - | chr4_3:52335292-52335311 | None:intergenic | 50.0% | |
| TCACGAGCAGGATGTTGTTG+GGG | - | chr4_3:52335303-52335322 | None:intergenic | 50.0% | |
| GTGTCATGTGAATCACGAGC+AGG | - | chr4_3:52335315-52335334 | None:intergenic | 50.0% | |
| ! | CTGGTGGATATGAGTCTAGG+GGG | + | chr4_3:52335489-52335508 | Msa0646560:CDS | 50.0% |
| GGGAAGAAACAGCAGTTGTG+TGG | - | chr4_3:52335681-52335700 | None:intergenic | 50.0% | |
| ACATACAAACCTGTGCCAGC+TGG | - | chr4_3:52335714-52335733 | None:intergenic | 50.0% | |
| ! | TGCCTTTTCCTTGCATCCAC+AGG | + | chr4_3:52335914-52335933 | Msa0646560:intron | 50.0% |
| ! | GCCTTTTCCTTGCATCCACA+GGG | + | chr4_3:52335915-52335934 | Msa0646560:intron | 50.0% |
| TCCCTGTGGATGCAAGGAAA+AGG | - | chr4_3:52335919-52335938 | None:intergenic | 50.0% | |
| CGAAAACGATCCACCTTCGA+TGG | + | chr4_3:52336180-52336199 | Msa0646560:intron | 50.0% | |
| GGTTCAATGAGGGGTAACCT+TGG | + | chr4_3:52336286-52336305 | Msa0646560:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr4_3:52336306-52336325 | None:intergenic | 50.0% | |
| ! | TCAGGCCTTGTATGTGATCG+AGG | + | chr4_3:52336551-52336570 | Msa0646560:intron | 50.0% |
| ! | TCTCTGGAGATACCTTCGGG+CGG | - | chr4_3:52330302-52330321 | None:intergenic | 55.0% |
| ! | ATGAGTTGGCGGAACCCACT+TGG | + | chr4_3:52330823-52330842 | Msa0646560:intron | 55.0% |
| ! | TGAGTTGGCGGAACCCACTT+GGG | + | chr4_3:52330824-52330843 | Msa0646560:intron | 55.0% |
| ! | GGAACCCACTTGGGTTGTTC+TGG | + | chr4_3:52330833-52330852 | Msa0646560:intron | 55.0% |
| ! | ACCCACTTGGGTTGTTCTGG+TGG | + | chr4_3:52330836-52330855 | Msa0646560:intron | 55.0% |
| CACCACCAGAACAACCCAAG+TGG | - | chr4_3:52330841-52330860 | None:intergenic | 55.0% | |
| ! | TTCCCCGGTGCCAATTTAGG+TGG | + | chr4_3:52330911-52330930 | Msa0646560:intron | 55.0% |
| ! | TCCCCGGTGCCAATTTAGGT+GGG | + | chr4_3:52330912-52330931 | Msa0646560:intron | 55.0% |
| AGCCCACCTAAATTGGCACC+GGG | - | chr4_3:52330917-52330936 | None:intergenic | 55.0% | |
| CATTGACAACCCCCTTCCCA+AGG | - | chr4_3:52331609-52331628 | None:intergenic | 55.0% | |
| CTAGTGGTGAGGGGTTTGGA+TGG | - | chr4_3:52333784-52333803 | None:intergenic | 55.0% | |
| !! | TGGACTAGTGGTGAGGGGTT+TGG | - | chr4_3:52333788-52333807 | None:intergenic | 55.0% |
| TTTATTGGGGGGCAGGAGGA+GGG | - | chr4_3:52333947-52333966 | None:intergenic | 55.0% | |
| ATTTATTGGGGGGCAGGAGG+AGG | - | chr4_3:52333948-52333967 | None:intergenic | 55.0% | |
| GGAGGCTTTCAAGCAAGCAG+TGG | + | chr4_3:52333991-52334010 | Msa0646560:intron | 55.0% | |
| CCGTCTTGCTTCTACTCAGG+CGG | - | chr4_3:52334113-52334132 | None:intergenic | 55.0% | |
| CCGCCTGAGTAGAAGCAAGA+CGG | + | chr4_3:52334110-52334129 | Msa0646560:intron | 55.0% | |
| GAGAAGTGGGTCTACCTTGG+AGG | + | chr4_3:52334161-52334180 | Msa0646560:intron | 55.0% | |
| !! | GTATGGTACGGAGTGTTGGG+CGG | + | chr4_3:52334398-52334417 | Msa0646560:intron | 55.0% |
| CGGAGATGAGGATGTTGCGT+TGG | + | chr4_3:52334454-52334473 | Msa0646560:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr4_3:52334773-52334792 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr4_3:52334772-52334791 | Msa0646560:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr4_3:52334773-52334792 | Msa0646560:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr4_3:52334779-52334798 | Msa0646560:intron | 55.0% | |
| GAACGCCCGTGTTCTTCGAA+AGG | + | chr4_3:52335016-52335035 | Msa0646560:intron | 55.0% | |
| TTCCCGGATGCTTTACCAGC+TGG | + | chr4_3:52335696-52335715 | Msa0646560:CDS | 55.0% | |
| ! | TGCCAGCTGGTAAAGCATCC+GGG | - | chr4_3:52335701-52335720 | None:intergenic | 55.0% |
| ! | GTGCCAGCTGGTAAAGCATC+CGG | - | chr4_3:52335702-52335721 | None:intergenic | 55.0% |
| GATGCTTTACCAGCTGGCAC+AGG | + | chr4_3:52335702-52335721 | Msa0646560:CDS | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr4_3:52336341-52336360 | Msa0646560:intron | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | - | chr4_3:52336436-52336455 | None:intergenic | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | - | chr4_3:52336437-52336456 | None:intergenic | 55.0% | |
| ACCTGAAATGTTGCGGCCGA+TGG | + | chr4_3:52336979-52336998 | Msa0646560:CDS | 55.0% | |
| CCTGAAATGTTGCGGCCGAT+GGG | + | chr4_3:52336980-52336999 | Msa0646560:CDS | 55.0% | |
| CAGAGATCTCTTCGGCCACA+AGG | + | chr4_3:52337268-52337287 | Msa0646560:CDS | 55.0% | |
| GCCGTCGCCGTTCTATTGTG+CGG | + | chr4_3:52329921-52329940 | Msa0646560:five_prime_UTR | 60.0% | |
| GCCGCACAATAGAACGGCGA+CGG | - | chr4_3:52329925-52329944 | None:intergenic | 60.0% | |
| GTCGCCGTTCTATTGTGCGG+CGG | + | chr4_3:52329924-52329943 | Msa0646560:five_prime_UTR | 60.0% | |
| GCCCACCTAAATTGGCACCG+GGG | - | chr4_3:52330916-52330935 | None:intergenic | 60.0% | |
| GAGCAGGATGTTGTTGGGGC+TGG | - | chr4_3:52335299-52335318 | None:intergenic | 60.0% | |
| CAGTTGTGTGGGTCCGCAGA+AGG | - | chr4_3:52335669-52335688 | None:intergenic | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr4_3:52336295-52336314 | Msa0646560:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr4_3:52336409-52336428 | Msa0646560:intron | 60.0% |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr4_3:52336424-52336443 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr4_3:52336425-52336444 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr4_3:52336424-52336443 | Msa0646560:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr4_3:52336425-52336444 | Msa0646560:intron | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr4_3:52336441-52336460 | Msa0646560:intron | 60.0% |
| CCCATCGGCCGCAACATTTC+AGG | - | chr4_3:52336983-52337002 | None:intergenic | 60.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr4_3:52336411-52336430 | None:intergenic | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr4_3:52336426-52336445 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr4_3:52336430-52336449 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr4_3:52336431-52336450 | None:intergenic | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr4_3:52336442-52336461 | Msa0646560:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 52329839 | 52337775 | 52329839 | ID=Msa0646560;Name=Msa0646560 |
| chr4_3 | mRNA | 52329839 | 52337775 | 52329839 | ID=Msa0646560-mRNA-1;Parent=Msa0646560;Name=Msa0646560-mRNA-1;_AED=0.14;_eAED=0.14;_QI=123|0.93|0.94|1|1|1|17|268|473 |
| chr4_3 | exon | 52329839 | 52330108 | 52329839 | ID=Msa0646560-mRNA-1:exon:12809;Parent=Msa0646560-mRNA-1 |
| chr4_3 | exon | 52330209 | 52330331 | 52330209 | ID=Msa0646560-mRNA-1:exon:12810;Parent=Msa0646560-mRNA-1 |
| chr4_3 | exon | 52331150 | 52331242 | 52331150 | ID=Msa0646560-mRNA-1:exon:12811;Parent=Msa0646560-mRNA-1 |
| chr4_3 | exon | 52331449 | 52331505 | 52331449 | ID=Msa0646560-mRNA-1:exon:12812;Parent=Msa0646560-mRNA-1 |
| chr4_3 | exon | 52332397 | 52332452 | 52332397 | ID=Msa0646560-mRNA-1:exon:12813;Parent=Msa0646560-mRNA-1 |
| chr4_3 | exon | 52332567 | 52332659 | 52332567 | ID=Msa0646560-mRNA-1:exon:12814;Parent=Msa0646560-mRNA-1 |
| chr4_3 | exon | 52332755 | 52332838 | 52332755 | ID=Msa0646560-mRNA-1:exon:12815;Parent=Msa0646560-mRNA-1 |
| chr4_3 | exon | 52333618 | 52333656 | 52333618 | ID=Msa0646560-mRNA-1:exon:12816;Parent=Msa0646560-mRNA-1 |
| chr4_3 | exon | 52335272 | 52335348 | 52335272 | ID=Msa0646560-mRNA-1:exon:12817;Parent=Msa0646560-mRNA-1 |
| chr4_3 | exon | 52335426 | 52335510 | 52335426 | ID=Msa0646560-mRNA-1:exon:12818;Parent=Msa0646560-mRNA-1 |
| chr4_3 | exon | 52335627 | 52335723 | 52335627 | ID=Msa0646560-mRNA-1:exon:12819;Parent=Msa0646560-mRNA-1 |
| chr4_3 | exon | 52336018 | 52336114 | 52336018 | ID=Msa0646560-mRNA-1:exon:12820;Parent=Msa0646560-mRNA-1 |
| chr4_3 | exon | 52336555 | 52336626 | 52336555 | ID=Msa0646560-mRNA-1:exon:12821;Parent=Msa0646560-mRNA-1 |
| chr4_3 | exon | 52336766 | 52336832 | 52336766 | ID=Msa0646560-mRNA-1:exon:12822;Parent=Msa0646560-mRNA-1 |
| chr4_3 | exon | 52336925 | 52337050 | 52336925 | ID=Msa0646560-mRNA-1:exon:12823;Parent=Msa0646560-mRNA-1 |
| chr4_3 | exon | 52337235 | 52337289 | 52337235 | ID=Msa0646560-mRNA-1:exon:12824;Parent=Msa0646560-mRNA-1 |
| chr4_3 | exon | 52337454 | 52337775 | 52337454 | ID=Msa0646560-mRNA-1:exon:12825;Parent=Msa0646560-mRNA-1 |
| chr4_3 | five_prime_UTR | 52329839 | 52329961 | 52329839 | ID=Msa0646560-mRNA-1:five_prime_utr;Parent=Msa0646560-mRNA-1 |
| chr4_3 | CDS | 52329962 | 52330108 | 52329962 | ID=Msa0646560-mRNA-1:cds;Parent=Msa0646560-mRNA-1 |
| chr4_3 | CDS | 52330209 | 52330331 | 52330209 | ID=Msa0646560-mRNA-1:cds;Parent=Msa0646560-mRNA-1 |
| chr4_3 | CDS | 52331150 | 52331242 | 52331150 | ID=Msa0646560-mRNA-1:cds;Parent=Msa0646560-mRNA-1 |
| chr4_3 | CDS | 52331449 | 52331505 | 52331449 | ID=Msa0646560-mRNA-1:cds;Parent=Msa0646560-mRNA-1 |
| chr4_3 | CDS | 52332397 | 52332452 | 52332397 | ID=Msa0646560-mRNA-1:cds;Parent=Msa0646560-mRNA-1 |
| chr4_3 | CDS | 52332567 | 52332659 | 52332567 | ID=Msa0646560-mRNA-1:cds;Parent=Msa0646560-mRNA-1 |
| chr4_3 | CDS | 52332755 | 52332838 | 52332755 | ID=Msa0646560-mRNA-1:cds;Parent=Msa0646560-mRNA-1 |
| chr4_3 | CDS | 52333618 | 52333656 | 52333618 | ID=Msa0646560-mRNA-1:cds;Parent=Msa0646560-mRNA-1 |
| chr4_3 | CDS | 52335272 | 52335348 | 52335272 | ID=Msa0646560-mRNA-1:cds;Parent=Msa0646560-mRNA-1 |
| chr4_3 | CDS | 52335426 | 52335510 | 52335426 | ID=Msa0646560-mRNA-1:cds;Parent=Msa0646560-mRNA-1 |
| chr4_3 | CDS | 52335627 | 52335723 | 52335627 | ID=Msa0646560-mRNA-1:cds;Parent=Msa0646560-mRNA-1 |
| chr4_3 | CDS | 52336018 | 52336114 | 52336018 | ID=Msa0646560-mRNA-1:cds;Parent=Msa0646560-mRNA-1 |
| chr4_3 | CDS | 52336555 | 52336626 | 52336555 | ID=Msa0646560-mRNA-1:cds;Parent=Msa0646560-mRNA-1 |
| chr4_3 | CDS | 52336766 | 52336832 | 52336766 | ID=Msa0646560-mRNA-1:cds;Parent=Msa0646560-mRNA-1 |
| chr4_3 | CDS | 52336925 | 52337050 | 52336925 | ID=Msa0646560-mRNA-1:cds;Parent=Msa0646560-mRNA-1 |
| chr4_3 | CDS | 52337235 | 52337289 | 52337235 | ID=Msa0646560-mRNA-1:cds;Parent=Msa0646560-mRNA-1 |
| chr4_3 | CDS | 52337454 | 52337507 | 52337454 | ID=Msa0646560-mRNA-1:cds;Parent=Msa0646560-mRNA-1 |
| chr4_3 | three_prime_UTR | 52337508 | 52337775 | 52337508 | ID=Msa0646560-mRNA-1:three_prime_utr;Parent=Msa0646560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
