Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547920 | XP_004487038.1 | 97.386 | 153 | 4 | 0 | 1 | 153 | 1 | 153 | 3.73e-100 | 294 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547920 | sp|Q9AT35|RL23A_DAUCA | 87.013 | 154 | 19 | 1 | 1 | 153 | 1 | 154 | 4.60e-82 | 241 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547920 | A0A1S2XC20 | 97.386 | 153 | 4 | 0 | 1 | 153 | 1 | 153 | 1.78e-100 | 294 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0547920 | 0.855587 | 5.708662e-62 | -8.615850e-47 |
| Msa0002430 | Msa0547920 | 0.809830 | 1.558921e-50 | -8.615850e-47 |
| Msa0003330 | Msa0547920 | 0.847002 | 1.522599e-59 | -8.615850e-47 |
| Msa0016340 | Msa0547920 | 0.801379 | 9.259754e-49 | -8.615850e-47 |
| Msa0027590 | Msa0547920 | 0.873095 | 1.917769e-67 | -8.615850e-47 |
| Msa0040220 | Msa0547920 | 0.872849 | 2.317937e-67 | -8.615850e-47 |
| Msa0042510 | Msa0547920 | 0.823249 | 1.533283e-53 | -8.615850e-47 |
| Msa0071760 | Msa0547920 | 0.841009 | 6.162291e-58 | -8.615850e-47 |
| Msa0072570 | Msa0547920 | 0.832497 | 9.138569e-56 | -8.615850e-47 |
| Msa0075350 | Msa0547920 | 0.817685 | 2.901167e-52 | -8.615850e-47 |
| Msa0079560 | Msa0547920 | 0.833148 | 6.296978e-56 | -8.615850e-47 |
| Msa0086160 | Msa0547920 | 0.861013 | 1.382552e-63 | -8.615850e-47 |
| Msa0087910 | Msa0547920 | 0.898944 | 3.228674e-77 | -8.615850e-47 |
| Msa0089540 | Msa0547920 | 0.840021 | 1.117145e-57 | -8.615850e-47 |
| Msa0094210 | Msa0547920 | 0.807147 | 5.826090e-50 | -8.615850e-47 |
| Msa0114600 | Msa0547920 | 0.896901 | 2.363419e-76 | -8.615850e-47 |
| Msa0116600 | Msa0547920 | 0.812488 | 4.133618e-51 | -8.615850e-47 |
| Msa0116690 | Msa0547920 | 0.809141 | 2.191141e-50 | -8.615850e-47 |
| Msa0123290 | Msa0547920 | 0.860809 | 1.594689e-63 | -8.615850e-47 |
| Msa0127230 | Msa0547920 | 0.821278 | 4.395742e-53 | -8.615850e-47 |
| Msa0128330 | Msa0547920 | 0.891669 | 3.216139e-74 | -8.615850e-47 |
| Msa0132460 | Msa0547920 | 0.906798 | 1.009620e-80 | -8.615850e-47 |
| Msa0134580 | Msa0547920 | 0.902528 | 8.840722e-79 | -8.615850e-47 |
| Msa0146610 | Msa0547920 | 0.818381 | 2.019015e-52 | -8.615850e-47 |
| Msa0167860 | Msa0547920 | 0.915103 | 8.761138e-85 | -8.615850e-47 |
| Msa0174580 | Msa0547920 | 0.882204 | 1.267013e-70 | -8.615850e-47 |
| Msa0182050 | Msa0547920 | 0.908832 | 1.110737e-81 | -8.615850e-47 |
| Msa0182100 | Msa0547920 | 0.907191 | 6.617649e-81 | -8.615850e-47 |
| Msa0183840 | Msa0547920 | 0.829614 | 4.663696e-55 | -8.615850e-47 |
| Msa0187810 | Msa0547920 | 0.847720 | 9.671022e-60 | -8.615850e-47 |
| Msa0188740 | Msa0547920 | 0.863129 | 3.103825e-64 | -8.615850e-47 |
| Msa0191450 | Msa0547920 | 0.847070 | 1.458664e-59 | -8.615850e-47 |
| Msa0191550 | Msa0547920 | 0.872765 | 2.473668e-67 | -8.615850e-47 |
| Msa0192300 | Msa0547920 | 0.875713 | 2.480261e-68 | -8.615850e-47 |
| Msa0194940 | Msa0547920 | 0.858583 | 7.456569e-63 | -8.615850e-47 |
| Msa0195030 | Msa0547920 | 0.816466 | 5.451769e-52 | -8.615850e-47 |
| Msa0219090 | Msa0547920 | 0.834284 | 3.275350e-56 | -8.615850e-47 |
| Msa0233550 | Msa0547920 | 0.822335 | 2.503328e-53 | -8.615850e-47 |
| Msa0234850 | Msa0547920 | 0.804930 | 1.705028e-49 | -8.615850e-47 |
| Msa0235050 | Msa0547920 | 0.860341 | 2.209431e-63 | -8.615850e-47 |
| Msa0237180 | Msa0547920 | 0.820983 | 5.139732e-53 | -8.615850e-47 |
| Msa0369410 | Msa0547920 | 0.841553 | 4.432216e-58 | -8.615850e-47 |
| Msa0371490 | Msa0547920 | 0.872651 | 2.699254e-67 | -8.615850e-47 |
| Msa0376850 | Msa0547920 | 0.803673 | 3.115456e-49 | -8.615850e-47 |
| Msa0377370 | Msa0547920 | 0.873651 | 1.246240e-67 | -8.615850e-47 |
| Msa0377520 | Msa0547920 | 0.828506 | 8.656346e-55 | -8.615850e-47 |
| Msa0382670 | Msa0547920 | 0.822942 | 1.808468e-53 | -8.615850e-47 |
| Msa0382950 | Msa0547920 | 0.823429 | 1.391694e-53 | -8.615850e-47 |
| Msa0382960 | Msa0547920 | 0.818467 | 1.930786e-52 | -8.615850e-47 |
| Msa0387290 | Msa0547920 | 0.803089 | 4.117092e-49 | -8.615850e-47 |
| Msa0388520 | Msa0547920 | 0.811092 | 8.323882e-51 | -8.615850e-47 |
| Msa0416470 | Msa0547920 | 0.816570 | 5.165670e-52 | -8.615850e-47 |
| Msa0419710 | Msa0547920 | 0.815702 | 8.072585e-52 | -8.615850e-47 |
| Msa0426090 | Msa0547920 | 0.890488 | 9.419153e-74 | -8.615850e-47 |
| Msa0426250 | Msa0547920 | 0.903050 | 5.177782e-79 | -8.615850e-47 |
| Msa0432750 | Msa0547920 | 0.854907 | 9.003470e-62 | -8.615850e-47 |
| Msa0433010 | Msa0547920 | 0.806162 | 9.404388e-50 | -8.615850e-47 |
| Msa0433060 | Msa0547920 | 0.846856 | 1.669459e-59 | -8.615850e-47 |
| Msa0450150 | Msa0547920 | 0.856962 | 2.255628e-62 | -8.615850e-47 |
| Msa0472480 | Msa0547920 | 0.884305 | 2.148032e-71 | -8.615850e-47 |
| Msa0475810 | Msa0547920 | 0.835155 | 1.978468e-56 | -8.615850e-47 |
| Msa0479980 | Msa0547920 | 0.856547 | 2.989353e-62 | -8.615850e-47 |
| Msa0481520 | Msa0547920 | 0.840803 | 6.975961e-58 | -8.615850e-47 |
| Msa0482560 | Msa0547920 | 0.808801 | 2.591239e-50 | -8.615850e-47 |
| Msa0239420 | Msa0547920 | 0.853180 | 2.833270e-61 | -8.615850e-47 |
| Msa0264640 | Msa0547920 | 0.822701 | 2.057457e-53 | -8.615850e-47 |
| Msa0270160 | Msa0547920 | 0.882514 | 9.773241e-71 | -8.615850e-47 |
| Msa0274940 | Msa0547920 | 0.820536 | 6.512168e-53 | -8.615850e-47 |
| Msa0277600 | Msa0547920 | 0.935627 | 6.299960e-97 | -8.615850e-47 |
| Msa0281330 | Msa0547920 | 0.880588 | 4.849412e-70 | -8.615850e-47 |
| Msa0281370 | Msa0547920 | 0.891730 | 3.043045e-74 | -8.615850e-47 |
| Msa0301250 | Msa0547920 | 0.879773 | 9.472138e-70 | -8.615850e-47 |
| Msa0312210 | Msa0547920 | 0.805415 | 1.349677e-49 | -8.615850e-47 |
| Msa0313060 | Msa0547920 | 0.898076 | 7.559568e-77 | -8.615850e-47 |
| Msa0315430 | Msa0547920 | 0.901335 | 2.972104e-78 | -8.615850e-47 |
| Msa0315660 | Msa0547920 | 0.823874 | 1.095131e-53 | -8.615850e-47 |
| Msa0340560 | Msa0547920 | 0.856364 | 3.381569e-62 | -8.615850e-47 |
| Msa0346090 | Msa0547920 | 0.815825 | 7.580910e-52 | -8.615850e-47 |
| Msa0363320 | Msa0547920 | 0.833506 | 5.128423e-56 | -8.615850e-47 |
| Msa0485220 | Msa0547920 | 0.813223 | 2.854287e-51 | -8.615850e-47 |
| Msa0511760 | Msa0547920 | 0.859123 | 5.140013e-63 | -8.615850e-47 |
| Msa0516830 | Msa0547920 | 0.804120 | 2.515462e-49 | -8.615850e-47 |
| Msa0517480 | Msa0547920 | 0.842457 | 2.555926e-58 | -8.615850e-47 |
| Msa0521730 | Msa0547920 | 0.842837 | 2.025537e-58 | -8.615850e-47 |
| Msa0524680 | Msa0547920 | 0.845057 | 5.150047e-59 | -8.615850e-47 |
| Msa0529900 | Msa0547920 | 0.815162 | 1.064677e-51 | -8.615850e-47 |
| Msa0547920 | Msa0550420 | 0.809291 | 2.035168e-50 | -8.615850e-47 |
| Msa0547920 | Msa0550490 | 0.860215 | 2.411908e-63 | -8.615850e-47 |
| Msa0547920 | Msa0552510 | 0.831744 | 1.403135e-55 | -8.615850e-47 |
| Msa0547920 | Msa0568380 | 0.828665 | 7.924899e-55 | -8.615850e-47 |
| Msa0547920 | Msa0573550 | 0.920460 | 1.244052e-87 | -8.615850e-47 |
| Msa0547920 | Msa0574780 | 0.885771 | 6.099275e-72 | -8.615850e-47 |
| Msa0547920 | Msa0578010 | 0.847209 | 1.336523e-59 | -8.615850e-47 |
| Msa0547920 | Msa0579830 | 0.845283 | 4.472290e-59 | -8.615850e-47 |
| Msa0547920 | Msa0582070 | 0.825132 | 5.537705e-54 | -8.615850e-47 |
| Msa0547920 | Msa0585570 | 0.840379 | 9.009913e-58 | -8.615850e-47 |
| Msa0547920 | Msa0597240 | 0.894755 | 1.829925e-75 | -8.615850e-47 |
| Msa0547920 | Msa0602900 | 0.995104 | 4.651504e-213 | -8.615850e-47 |
| Msa0547920 | Msa0605600 | 0.818934 | 1.512738e-52 | -8.615850e-47 |
| Msa0547920 | Msa0605610 | 0.802783 | 4.762478e-49 | -8.615850e-47 |
| Msa0547920 | Msa0605890 | 0.919902 | 2.515385e-87 | -8.615850e-47 |
| Msa0547920 | Msa0609120 | 0.831942 | 1.254002e-55 | -8.615850e-47 |
| Msa0547920 | Msa0619230 | 0.913075 | 9.365962e-84 | -8.615850e-47 |
| Msa0547920 | Msa0621190 | 0.809823 | 1.563791e-50 | -8.615850e-47 |
| Msa0547920 | Msa0622230 | 0.839753 | 1.312202e-57 | -8.615850e-47 |
| Msa0547920 | Msa0643960 | 0.996671 | 1.298340e-230 | -8.615850e-47 |
| Msa0547920 | Msa0646560 | 0.800735 | 1.253628e-48 | -8.615850e-47 |
| Msa0547920 | Msa0648670 | 0.803002 | 4.291011e-49 | -8.615850e-47 |
| Msa0547920 | Msa0649890 | 0.842398 | 2.649988e-58 | -8.615850e-47 |
| Msa0547920 | Msa0653060 | 0.833138 | 6.333450e-56 | -8.615850e-47 |
| Msa0547920 | Msa0656450 | 0.853116 | 2.955870e-61 | -8.615850e-47 |
| Msa0547920 | Msa0663400 | 0.847921 | 8.517391e-60 | -8.615850e-47 |
| Msa0547920 | Msa0686550 | 0.839656 | 1.390704e-57 | -8.615850e-47 |
| Msa0547920 | Msa0686660 | 0.805068 | 1.595966e-49 | -8.615850e-47 |
| Msa0547920 | Msa0691760 | 0.812700 | 3.715838e-51 | -8.615850e-47 |
| Msa0547920 | Msa0694400 | 0.919490 | 4.215817e-87 | -8.615850e-47 |
| Msa0547920 | Msa0704860 | 0.884363 | 2.044438e-71 | -8.615850e-47 |
| Msa0547920 | Msa0708630 | 0.907373 | 5.434582e-81 | -8.615850e-47 |
| Msa0547920 | Msa0715970 | 0.806160 | 9.415879e-50 | -8.615850e-47 |
| Msa0547920 | Msa0718560 | 0.805783 | 1.129942e-49 | -8.615850e-47 |
| Msa0547920 | Msa0741510 | 0.869144 | 3.859100e-66 | -8.615850e-47 |
| Msa0547920 | Msa0748350 | 0.867462 | 1.344227e-65 | -8.615850e-47 |
| Msa0547920 | Msa0749000 | 0.807745 | 4.349874e-50 | -8.615850e-47 |
| Msa0547920 | Msa0788380 | 0.816532 | 5.267325e-52 | -8.615850e-47 |
| Msa0547920 | Msa0790450 | 0.892858 | 1.076911e-74 | -8.615850e-47 |
| Msa0547920 | Msa0796490 | 0.831346 | 1.758456e-55 | -8.615850e-47 |
| Msa0547920 | Msa0798590 | 0.850912 | 1.249397e-60 | -8.615850e-47 |
| Msa0547920 | Msa0834220 | 0.804758 | 1.852599e-49 | -8.615850e-47 |
| Msa0547920 | Msa0880050 | 0.807772 | 4.293941e-50 | -8.615850e-47 |
| Msa0547920 | Msa0902220 | 0.824721 | 6.921927e-54 | -8.615850e-47 |
| Msa0547920 | Msa0902730 | 0.821430 | 4.053855e-53 | -8.615850e-47 |
| Msa0547920 | Msa0927910 | 0.827512 | 1.501513e-54 | -8.615850e-47 |
| Msa0547920 | Msa0929680 | 0.845855 | 3.130584e-59 | -8.615850e-47 |
| Msa0547920 | Msa0929700 | 0.935503 | 7.653079e-97 | -8.615850e-47 |
| Msa0547920 | Msa0930100 | 0.846293 | 2.378407e-59 | -8.615850e-47 |
| Msa0547920 | Msa0930360 | 0.826422 | 2.737226e-54 | -8.615850e-47 |
| Msa0547920 | Msa0930790 | 0.836323 | 1.000678e-56 | -8.615850e-47 |
| Msa0547920 | Msa0930890 | 0.894694 | 1.937284e-75 | -8.615850e-47 |
| Msa0547920 | Msa1004780 | 0.827671 | 1.375415e-54 | -8.615850e-47 |
| Msa0547920 | Msa1019110 | 0.857863 | 1.221608e-62 | -8.615850e-47 |
| Msa0547920 | Msa1025200 | 0.841846 | 3.707951e-58 | -8.615850e-47 |
| Msa0547920 | Msa1025220 | 0.835900 | 1.281503e-56 | -8.615850e-47 |
| Msa0547920 | Msa1040160 | 0.833436 | 5.340466e-56 | -8.615850e-47 |
| Msa0547920 | Msa1041680 | 0.807018 | 6.202538e-50 | -8.615850e-47 |
| Msa0547920 | Msa1047020 | 0.857440 | 1.630492e-62 | -8.615850e-47 |
| Msa0547920 | Msa1050100 | 0.854806 | 9.632041e-62 | -8.615850e-47 |
| Msa0547920 | Msa1054280 | 0.849636 | 2.847556e-60 | -8.615850e-47 |
| Msa0547920 | Msa1070810 | 0.801146 | 1.033448e-48 | -8.615850e-47 |
| Msa0547920 | Msa1079910 | 0.859835 | 3.141505e-63 | -8.615850e-47 |
| Msa0547920 | Msa1082050 | 0.827260 | 1.725513e-54 | -8.615850e-47 |
| Msa0547920 | Msa1083370 | 0.847980 | 8.203222e-60 | -8.615850e-47 |
| Msa0547920 | Msa1085850 | 0.872030 | 4.347326e-67 | -8.615850e-47 |
| Msa0547920 | Msa1093500 | 0.830776 | 2.427832e-55 | -8.615850e-47 |
| Msa0547920 | Msa1116940 | 0.854765 | 9.895296e-62 | -8.615850e-47 |
| Msa0547920 | Msa1124850 | 0.826461 | 2.679212e-54 | -8.615850e-47 |
| Msa0547920 | Msa1124980 | 0.805793 | 1.124448e-49 | -8.615850e-47 |
| Msa0547920 | Msa1126690 | 0.891761 | 2.956575e-74 | -8.615850e-47 |
| Msa0547920 | Msa1130680 | 0.812641 | 3.828320e-51 | -8.615850e-47 |
| Msa0547920 | Msa1131030 | 0.821041 | 4.984261e-53 | -8.615850e-47 |
| Msa0547920 | Msa1136880 | 0.846956 | 1.567999e-59 | -8.615850e-47 |
| Msa0547920 | Msa1144610 | 0.811093 | 8.318652e-51 | -8.615850e-47 |
| Msa0547920 | Msa1158630 | 0.803089 | 4.117092e-49 | -8.615850e-47 |
| Msa0547920 | Msa1163320 | 0.822461 | 2.340270e-53 | -8.615850e-47 |
| Msa0547920 | Msa1164150 | 0.819085 | 1.397366e-52 | -8.615850e-47 |
| Msa0547920 | Msa1165210 | 0.805424 | 1.343946e-49 | -8.615850e-47 |
| Msa0547920 | Msa1165640 | 0.838693 | 2.471881e-57 | -8.615850e-47 |
| Msa0547920 | Msa1166570 | 0.806564 | 7.738288e-50 | -8.615850e-47 |
| Msa0547920 | Msa1166670 | 0.811948 | 5.422850e-51 | -8.615850e-47 |
| Msa0547920 | Msa1167360 | 0.814398 | 1.572629e-51 | -8.615850e-47 |
| Msa0547920 | Msa1180000 | 0.876085 | 1.848523e-68 | -8.615850e-47 |
| Msa0547920 | Msa1186030 | 0.838871 | 2.222210e-57 | -8.615850e-47 |
| Msa0547920 | Msa1208330 | 0.809376 | 1.950880e-50 | -8.615850e-47 |
| Msa0547920 | Msa1213850 | 0.804822 | 1.796245e-49 | -8.615850e-47 |
| Msa0547920 | Msa1219760 | 0.859895 | 3.012435e-63 | -8.615850e-47 |
| Msa0547920 | Msa1227080 | 0.801984 | 6.955264e-49 | -8.615850e-47 |
| Msa0547920 | Msa1235950 | 0.916871 | 1.056799e-85 | -8.615850e-47 |
| Msa0547920 | Msa1235980 | 0.918616 | 1.250044e-86 | -8.615850e-47 |
| Msa0547920 | Msa1237040 | 0.891999 | 2.376319e-74 | -8.615850e-47 |
| Msa0547920 | Msa1240270 | 0.823170 | 1.600094e-53 | -8.615850e-47 |
| Msa0547920 | Msa1245270 | 0.801695 | 7.976228e-49 | -8.615850e-47 |
| Msa0547920 | Msa1255830 | 0.849029 | 4.203852e-60 | -8.615850e-47 |
| Msa0547920 | Msa1255850 | 0.859171 | 4.975430e-63 | -8.615850e-47 |
| Msa0547920 | Msa1258540 | 0.844054 | 9.585968e-59 | -8.615850e-47 |
| Msa0547920 | Msa1269250 | -0.822077 | 2.873502e-53 | -8.615850e-47 |
| Msa0547920 | Msa1270640 | 0.862489 | 4.888970e-64 | -8.615850e-47 |
| Msa0547920 | Msa1270710 | 0.862309 | 5.553705e-64 | -8.615850e-47 |
| Msa0547920 | Msa1278130 | 0.848541 | 5.737876e-60 | -8.615850e-47 |
| Msa0547920 | Msa1284060 | 0.830119 | 3.513082e-55 | -8.615850e-47 |
| Msa0547920 | Msa1284800 | 0.806318 | 8.718375e-50 | -8.615850e-47 |
| Msa0547920 | Msa1296090 | 0.848980 | 4.335356e-60 | -8.615850e-47 |
| Msa0547920 | Msa1316100 | 0.886161 | 4.349102e-72 | -8.615850e-47 |
| Msa0547920 | Msa1317390 | 0.894538 | 2.244333e-75 | -8.615850e-47 |
| Msa0547920 | Msa1330730 | 0.841308 | 5.139960e-58 | -8.615850e-47 |
| Msa0547920 | Msa1333370 | 0.845072 | 5.101864e-59 | -8.615850e-47 |
| Msa0547920 | Msa1341780 | 0.891418 | 4.043828e-74 | -8.615850e-47 |
| Msa0547920 | Msa1344160 | 0.808628 | 2.820863e-50 | -8.615850e-47 |
| Msa0547920 | Msa1344190 | 0.807326 | 5.339335e-50 | -8.615850e-47 |
| Msa0547920 | Msa1351020 | 0.912003 | 3.201314e-83 | -8.615850e-47 |
| Msa0547920 | Msa1351910 | 0.865180 | 7.117871e-65 | -8.615850e-47 |
| Msa0547920 | Msa1353300 | 0.829621 | 4.647276e-55 | -8.615850e-47 |
| Msa0547920 | Msa1358710 | 0.821406 | 4.105746e-53 | -8.615850e-47 |
| Msa0547920 | Msa1363910 | 0.836204 | 1.073265e-56 | -8.615850e-47 |
| Msa0547920 | Msa1367540 | 0.867553 | 1.257279e-65 | -8.615850e-47 |
| Msa0547920 | Msa1371410 | 0.861661 | 8.768849e-64 | -8.615850e-47 |
| Msa0547920 | Msa1385480 | 0.920834 | 7.737271e-88 | -8.615850e-47 |
| Msa0547920 | Msa1387750 | 0.806716 | 7.185728e-50 | -8.615850e-47 |
| Msa0547920 | Msa1390760 | 0.913324 | 7.020535e-84 | -8.615850e-47 |
| Msa0547920 | Msa1403520 | 0.832836 | 7.530212e-56 | -8.615850e-47 |
| Msa0547920 | Msa1407550 | 0.884897 | 1.294685e-71 | -8.615850e-47 |
| Msa0547920 | Msa1413570 | 0.858741 | 6.691592e-63 | -8.615850e-47 |
| Msa0547920 | Msa1415620 | 0.859511 | 3.931391e-63 | -8.615850e-47 |
| Msa0547920 | Msa1421510 | 0.843491 | 1.356367e-58 | -8.615850e-47 |
| Msa0547920 | Msa1423050 | 0.806979 | 6.321640e-50 | -8.615850e-47 |
| Msa0547920 | Msa1424570 | 0.892349 | 1.722710e-74 | -8.615850e-47 |
| Msa0547920 | Msa1425070 | 0.835490 | 1.628216e-56 | -8.615850e-47 |
| Msa0547920 | Msa1432310 | 0.883211 | 5.437915e-71 | -8.615850e-47 |
| Msa0547920 | Msa1441220 | -0.816273 | 6.020785e-52 | -8.615850e-47 |
| Msa0547920 | Msa1446410 | 0.844817 | 5.975721e-59 | -8.615850e-47 |
| Msa0547920 | Msa1446510 | 0.803000 | 4.296159e-49 | -8.615850e-47 |
| Msa0547920 | Msa1449160 | 0.826953 | 2.043905e-54 | -8.615850e-47 |
| Msa0547920 | Msa1450560 | 0.896483 | 3.533928e-76 | -8.615850e-47 |
| Msa0547920 | Msa1453530 | 0.817900 | 2.593957e-52 | -8.615850e-47 |
| Msa0547920 | Msa1462580 | 0.802679 | 5.002956e-49 | -8.615850e-47 |
| Msa0547920 | Msa1463570 | 0.885723 | 6.356906e-72 | -8.615850e-47 |
| Msa0547920 | Msa1465700 | 0.904948 | 7.196399e-80 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547920 | MtrunA17_Chr4g0030821 | 98.693 | 153 | 1 | 1 | 1 | 153 | 1 | 152 | 9.29e-104 | 293 |
| Msa0547920 | MtrunA17_Chr2g0327781 | 96.689 | 151 | 5 | 0 | 3 | 153 | 4 | 154 | 3.94e-101 | 286 |
| Msa0547920 | MtrunA17_Chr7g0222741 | 92.053 | 151 | 12 | 0 | 3 | 153 | 4 | 154 | 1.31e-67 | 202 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547920 | AT3G55280.1 | 87.662 | 154 | 18 | 1 | 1 | 153 | 1 | 154 | 2.39e-70 | 209 |
| Msa0547920 | AT3G55280.2 | 87.662 | 154 | 18 | 1 | 1 | 153 | 1 | 154 | 2.39e-70 | 209 |
| Msa0547920 | AT2G39460.1 | 89.844 | 128 | 13 | 0 | 26 | 153 | 27 | 154 | 1.24e-66 | 199 |
| Msa0547920 | AT2G39460.2 | 89.844 | 128 | 13 | 0 | 26 | 153 | 27 | 154 | 1.24e-66 | 199 |
| Msa0547920 | AT3G55280.3 | 92.373 | 118 | 9 | 0 | 36 | 153 | 31 | 148 | 2.64e-66 | 199 |
Find 70 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATCCCTTGTTTGTGTCTT+TGG | 0.162619 | 4_1:-41472346 | None:intergenic |
| GCTTTCAATGCCTGTGCCTT+TGG | 0.265621 | 4_1:-41472247 | None:intergenic |
| GGCACTGATGCGAGGATATT+TGG | 0.276630 | 4_1:-41472374 | None:intergenic |
| TATCCCTTGTTTGTGTCTTT+GGG | 0.296408 | 4_1:-41472345 | None:intergenic |
| CAACCTAACATAGGCCTTCT+TGG | 0.308307 | 4_1:-41473082 | None:intergenic |
| AAACGGGTTCTAGGGTTTAC+TGG | 0.315745 | 4_1:-41470958 | None:intergenic |
| GCACTGATGCGAGGATATTT+GGG | 0.324549 | 4_1:-41472373 | None:intergenic |
| CAGAGGAAGAAACGGGTTCT+AGG | 0.325173 | 4_1:-41470967 | None:intergenic |
| TAGTGGTCAAGCTTGTTTCT+TGG | 0.344862 | 4_1:-41472400 | None:intergenic |
| CGTAAATAAATACTAAGAAT+TGG | 0.348753 | 4_1:-41473370 | None:intergenic |
| GTTCTAGGGTTTACTGGTTT+CGG | 0.359030 | 4_1:-41470952 | None:intergenic |
| TTAGATGTTAGCCAGTTCTA+TGG | 0.385659 | 4_1:+41473185 | Msa0547920:three_prime_UTR |
| GTAGTCTAGTATATATGTTT+TGG | 0.388609 | 4_1:+41473485 | Msa0547920:three_prime_UTR |
| TAGTTATTGAAGGAAACTTT+TGG | 0.390719 | 4_1:+41473208 | Msa0547920:three_prime_UTR |
| TTCATTGACAAATCATGTAA+TGG | 0.410292 | 4_1:-41473441 | None:intergenic |
| GCACAAGTCAAGATTGTTCA+TGG | 0.413155 | 4_1:-41473592 | None:intergenic |
| TTCAATAACTACCATAGAAC+TGG | 0.419006 | 4_1:-41473196 | None:intergenic |
| TTGGATGTAGCAAACAAGAT+TGG | 0.425365 | 4_1:+41473123 | Msa0547920:CDS |
| ACATCCAATGCATCGTAATC+AGG | 0.425991 | 4_1:-41473108 | None:intergenic |
| CAATGCCTGTGCCTTTGGAT+CGG | 0.450132 | 4_1:-41472242 | None:intergenic |
| AGGTGTTAACCTTCTTCGCC+TGG | 0.454264 | 4_1:-41472558 | None:intergenic |
| AGTCAGTACCTGGATTTACC+TGG | 0.469690 | 4_1:+41473155 | Msa0547920:exon |
| TGGATGTAGCAAACAAGATT+GGG | 0.476041 | 4_1:+41473124 | Msa0547920:CDS |
| GCTGCCAAGGCAGTCAAGTC+AGG | 0.480557 | 4_1:+41472268 | Msa0547920:CDS |
| GTCAAGCTTGTTTCTTGGTG+TGG | 0.490928 | 4_1:-41472395 | None:intergenic |
| GTACCAAGAAGGCCTATGTT+AGG | 0.503933 | 4_1:+41473079 | Msa0547920:CDS |
| CATAAATGCTCACCTGATCA+AGG | 0.508831 | 4_1:-41472578 | None:intergenic |
| GGAACTTCAAAATCTGATAG+TGG | 0.511992 | 4_1:-41472417 | None:intergenic |
| TTGTTTGTGTCTTTGGGCGA+TGG | 0.513342 | 4_1:-41472339 | None:intergenic |
| AGTTCTATGGTAGTTATTGA+AGG | 0.514582 | 4_1:+41473198 | Msa0547920:three_prime_UTR |
| AATTGAGGATAACAACACTT+TGG | 0.518687 | 4_1:+41472468 | Msa0547920:CDS |
| ATAGGCCTTCTTGGTACCAT+CGG | 0.519310 | 4_1:-41473073 | None:intergenic |
| TTCCTCTGCATCCACCGCGA+AGG | 0.519918 | 4_1:+41470982 | Msa0547920:five_prime_UTR |
| AGAGGAAGAAACGGGTTCTA+GGG | 0.523704 | 4_1:-41470966 | None:intergenic |
| GAAGAAAATGTATGACATCC+AGG | 0.526017 | 4_1:+41472540 | Msa0547920:CDS |
| AGAAGGTTAACACCTTGATC+AGG | 0.531796 | 4_1:+41472566 | Msa0547920:CDS |
| GACACCTGATTACGATGCAT+TGG | 0.535533 | 4_1:+41473104 | Msa0547920:CDS |
| GTGGATGCAGAGGAAGAAAC+GGG | 0.538720 | 4_1:-41470974 | None:intergenic |
| AGTGCCTGACTTGACTGCCT+TGG | 0.543420 | 4_1:-41472272 | None:intergenic |
| TAGGCCTTCTTGGTACCATC+GGG | 0.543529 | 4_1:-41473072 | None:intergenic |
| CAAAGACACAAACAAGGGAT+AGG | 0.544147 | 4_1:+41472347 | Msa0547920:CDS |
| AATAGAACCCAGGTAAATCC+AGG | 0.548065 | 4_1:-41473163 | None:intergenic |
| GGTGGATGCAGAGGAAGAAA+CGG | 0.553400 | 4_1:-41470975 | None:intergenic |
| AGGCACTGCTATTAAGAAGA+AGG | 0.555789 | 4_1:+41472288 | Msa0547920:CDS |
| GTATGACATCCAGGCGAAGA+AGG | 0.560881 | 4_1:+41472549 | Msa0547920:CDS |
| GGATCATCTAAGTCAGTACC+TGG | 0.562175 | 4_1:+41473145 | Msa0547920:exon |
| TTAATCTGTTGCAGGCCCGA+TGG | 0.562967 | 4_1:+41473057 | Msa0547920:intron |
| ACAGGCATTGAAAGCTGCCA+AGG | 0.571400 | 4_1:+41472255 | Msa0547920:CDS |
| GAAGACCGATCCAAAGGCAC+AGG | 0.572296 | 4_1:+41472237 | Msa0547920:CDS |
| GTCAGTACCTGGATTTACCT+GGG | 0.574096 | 4_1:+41473156 | Msa0547920:three_prime_UTR |
| GTCCGCAATGAAGAAAATTG+AGG | 0.580232 | 4_1:+41472453 | Msa0547920:CDS |
| GCACTGTGCACAAACCTTCG+CGG | 0.588728 | 4_1:-41470996 | None:intergenic |
| CAGGCCCGATGGTACCAAGA+AGG | 0.589470 | 4_1:+41473068 | Msa0547920:intron |
| AACCTTCGCGGTGGATGCAG+AGG | 0.590066 | 4_1:-41470984 | None:intergenic |
| TTGCGGACTCAGTGGTGAGT+GGG | 0.598322 | 4_1:-41472438 | None:intergenic |
| TTCTAAGAAGACCGATCCAA+AGG | 0.610830 | 4_1:+41472231 | Msa0547920:CDS |
| ATTGCGGACTCAGTGGTGAG+TGG | 0.611075 | 4_1:-41472439 | None:intergenic |
| TTTCTTCATTGCGGACTCAG+TGG | 0.615852 | 4_1:-41472446 | None:intergenic |
| CACTGATGCGAGGATATTTG+GGG | 0.617729 | 4_1:-41472372 | None:intergenic |
| CTTGGTGTGGCACTGATGCG+AGG | 0.626082 | 4_1:-41472382 | None:intergenic |
| TTAGCTTGACGAGGCAACTG+AGG | 0.633424 | 4_1:+41473407 | Msa0547920:three_prime_UTR |
| CATAGAATGTTAGCTTGACG+AGG | 0.635703 | 4_1:+41473398 | Msa0547920:three_prime_UTR |
| ATCAGGTGTCAACCTAACAT+AGG | 0.641379 | 4_1:-41473091 | None:intergenic |
| CTGTGCACAAACCTTCGCGG+TGG | 0.647730 | 4_1:-41470993 | None:intergenic |
| ATCGCCCAAAGACACAAACA+AGG | 0.648974 | 4_1:+41472341 | Msa0547920:CDS |
| CAAGTCAAGATTGTTCATGG+TGG | 0.660293 | 4_1:-41473589 | None:intergenic |
| CTAACATCTAAATAGAACCC+AGG | 0.693241 | 4_1:-41473173 | None:intergenic |
| TGAGTCAAAATTGAAACACA+AGG | 0.718288 | 4_1:-41473303 | None:intergenic |
| TCGCCCAAAGACACAAACAA+GGG | 0.727590 | 4_1:+41472342 | Msa0547920:CDS |
| GAGACATCAAATTTACCACA+AGG | 0.729584 | 4_1:-41473508 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATTTTTTTCATGAATT+AGG | + | chr4_1:41471084-41471103 | Msa0547920:intron | 10.0% |
| !!! | TATATTTTTTTCATGAATTA+GGG | + | chr4_1:41471085-41471104 | Msa0547920:intron | 10.0% |
| !!! | TTTTTACTAACAAAAATGAA+TGG | - | chr4_1:41471228-41471247 | None:intergenic | 15.0% |
| !!! | TATTTTAATCAAATAATGCA+TGG | + | chr4_1:41472109-41472128 | Msa0547920:intron | 15.0% |
| !! | AATCAAATCATACATGAAAA+TGG | - | chr4_1:41471344-41471363 | None:intergenic | 20.0% |
| !!! | TCATGTATGATTTGATTTTA+AGG | + | chr4_1:41471347-41471366 | Msa0547920:intron | 20.0% |
| !!! | CTTAATTTTATAAGTTCTTC+AGG | - | chr4_1:41471552-41471571 | None:intergenic | 20.0% |
| !! | CTGAAGAACTTATAAAATTA+AGG | + | chr4_1:41471550-41471569 | Msa0547920:intron | 20.0% |
| !!! | CTTACATAAGCTATTTTTAT+AGG | + | chr4_1:41471700-41471719 | Msa0547920:intron | 20.0% |
| !! | AGCTTATGATATAACATTAA+GGG | - | chr4_1:41471998-41472017 | None:intergenic | 20.0% |
| !! | TACTAAGAATTGGAAAAATA+AGG | - | chr4_1:41473363-41473382 | None:intergenic | 20.0% |
| !! | CGTAAATAAATACTAAGAAT+TGG | - | chr4_1:41473373-41473392 | None:intergenic | 20.0% |
| ! | TGAAGAAATGAATGAAACAA+AGG | - | chr4_1:41471044-41471063 | None:intergenic | 25.0% |
| ! | AGAAAATTGAAGTTACCTTT+AGG | - | chr4_1:41471154-41471173 | None:intergenic | 25.0% |
| ! | ATTAAGGTGAAATTAGTGTA+TGG | + | chr4_1:41471566-41471585 | Msa0547920:intron | 25.0% |
| ! | GATTTACAAATTTGAGCTTA+TGG | - | chr4_1:41471610-41471629 | None:intergenic | 25.0% |
| ! | CAGCTTATGATATAACATTA+AGG | - | chr4_1:41471999-41472018 | None:intergenic | 25.0% |
| !! | GATTAATACTGATTATCCAT+AGG | + | chr4_1:41472073-41472092 | Msa0547920:intron | 25.0% |
| ! | ATCAAATAATGCATGGAATT+AGG | + | chr4_1:41472116-41472135 | Msa0547920:intron | 25.0% |
| ! | TGCTGATAAGAAAAAGATTA+AGG | + | chr4_1:41472510-41472529 | Msa0547920:CDS | 25.0% |
| ! | TACAAATTATCTCAAATGTC+AGG | - | chr4_1:41472712-41472731 | None:intergenic | 25.0% |
| !! | TTCTAGTTGAATATGTGTTT+AGG | + | chr4_1:41472842-41472861 | Msa0547920:intron | 25.0% |
| !! | TTCTAGTTGAATATGTGTTT+AGG | + | chr4_1:41472842-41472861 | Msa0547920:intron | 25.0% |
| ! | TTAATTATTATAGTTCAGCG+TGG | + | chr4_1:41473004-41473023 | Msa0547920:intron | 25.0% |
| !! | TAGTTATTGAAGGAAACTTT+TGG | + | chr4_1:41473208-41473227 | Msa0547920:three_prime_UTR | 25.0% |
| ! | TTCATTGACAAATCATGTAA+TGG | - | chr4_1:41473444-41473463 | None:intergenic | 25.0% |
| !! | GTAGTCTAGTATATATGTTT+TGG | + | chr4_1:41473485-41473504 | Msa0547920:three_prime_UTR | 25.0% |
| AATGAAACAAAGGAATTACG+AGG | - | chr4_1:41471034-41471053 | None:intergenic | 30.0% | |
| ! | CATGAATTAGGGTTTTTATC+AGG | + | chr4_1:41471096-41471115 | Msa0547920:intron | 30.0% |
| ! | TCTTTTCCATCTGCAAAAAA+TGG | + | chr4_1:41471126-41471145 | Msa0547920:exon | 30.0% |
| !!! | TTTTTTGCTCATCATAACTC+AGG | - | chr4_1:41471400-41471419 | None:intergenic | 30.0% |
| GAGTTATGATGAGCAAAAAA+AGG | + | chr4_1:41471400-41471419 | Msa0547920:intron | 30.0% | |
| ATGATGAGCAAAAAAAGGTT+AGG | + | chr4_1:41471405-41471424 | Msa0547920:intron | 30.0% | |
| AATAAGTTGCTTAACCAAAC+AGG | - | chr4_1:41471650-41471669 | None:intergenic | 30.0% | |
| ! | ATCCTCAATTTTCTTCATTG+CGG | - | chr4_1:41472458-41472477 | None:intergenic | 30.0% |
| AATTGAGGATAACAACACTT+TGG | + | chr4_1:41472468-41472487 | Msa0547920:CDS | 30.0% | |
| ATTTATGCAGTTACTGTTCA+AGG | + | chr4_1:41472594-41472613 | Msa0547920:intron | 30.0% | |
| ATGTCTGCAAAATATACTAC+TGG | - | chr4_1:41472737-41472756 | None:intergenic | 30.0% | |
| ! | TTCTAGTTGAATACGTGTTT+AGG | + | chr4_1:41472792-41472811 | Msa0547920:intron | 30.0% |
| TTAGGCATTAATACCAACAA+TGG | + | chr4_1:41472810-41472829 | Msa0547920:intron | 30.0% | |
| AGAAAACAGAAAACCATTGT+TGG | - | chr4_1:41472826-41472845 | None:intergenic | 30.0% | |
| TTAGGCATTAATACCAACAA+TGG | + | chr4_1:41472810-41472829 | Msa0547920:intron | 30.0% | |
| ! | GAATCTGGAATTAATGATCA+GGG | + | chr4_1:41472952-41472971 | Msa0547920:intron | 30.0% |
| TTCAATAACTACCATAGAAC+TGG | - | chr4_1:41473199-41473218 | None:intergenic | 30.0% | |
| AGTTCTATGGTAGTTATTGA+AGG | + | chr4_1:41473198-41473217 | Msa0547920:three_prime_UTR | 30.0% | |
| !! | TTGAAGGAAACTTTTGGAAA+AGG | + | chr4_1:41473214-41473233 | Msa0547920:three_prime_UTR | 30.0% |
| !! | TGAAGGAAACTTTTGGAAAA+GGG | + | chr4_1:41473215-41473234 | Msa0547920:three_prime_UTR | 30.0% |
| TGAGTCAAAATTGAAACACA+AGG | - | chr4_1:41473306-41473325 | None:intergenic | 30.0% | |
| AGCACATAAGCTTAAATCAG+TGG | - | chr4_1:41471191-41471210 | None:intergenic | 35.0% | |
| CTTAACCAAACAGGATGTAA+GGG | - | chr4_1:41471641-41471660 | None:intergenic | 35.0% | |
| TACGTTGTGTGAGATTGTTT+GGG | - | chr4_1:41471937-41471956 | None:intergenic | 35.0% | |
| ATACGTTGTGTGAGATTGTT+TGG | - | chr4_1:41471938-41471957 | None:intergenic | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | + | chr4_1:41471972-41471991 | Msa0547920:intron | 35.0% | |
| TATAACATTAAGGGCCTGTT+TGG | - | chr4_1:41471989-41472008 | None:intergenic | 35.0% | |
| ! | TACTGATTATCCATAGGCTT+TGG | + | chr4_1:41472079-41472098 | Msa0547920:intron | 35.0% |
| ATATACTGAACCAAAGCCTA+TGG | - | chr4_1:41472092-41472111 | None:intergenic | 35.0% | |
| ! | TATCCCTTGTTTGTGTCTTT+GGG | - | chr4_1:41472348-41472367 | None:intergenic | 35.0% |
| GGAACTTCAAAATCTGATAG+TGG | - | chr4_1:41472420-41472439 | None:intergenic | 35.0% | |
| GAAGAAAATGTATGACATCC+AGG | + | chr4_1:41472540-41472559 | Msa0547920:CDS | 35.0% | |
| !! | AGACATACCGAACCATTTTT+GGG | + | chr4_1:41472751-41472770 | Msa0547920:intron | 35.0% |
| CTAGAAAACAGAACCATTGT+TGG | - | chr4_1:41472876-41472895 | None:intergenic | 35.0% | |
| ! | GGAATCTGGAATTAATGATC+AGG | + | chr4_1:41472951-41472970 | Msa0547920:intron | 35.0% |
| ! | TCGACTTTTTAATCTGTTGC+AGG | + | chr4_1:41473049-41473068 | Msa0547920:intron | 35.0% |
| TTGGATGTAGCAAACAAGAT+TGG | + | chr4_1:41473123-41473142 | Msa0547920:CDS | 35.0% | |
| TGGATGTAGCAAACAAGATT+GGG | + | chr4_1:41473124-41473143 | Msa0547920:CDS | 35.0% | |
| CTAACATCTAAATAGAACCC+AGG | - | chr4_1:41473176-41473195 | None:intergenic | 35.0% | |
| TTAGATGTTAGCCAGTTCTA+TGG | + | chr4_1:41473185-41473204 | Msa0547920:three_prime_UTR | 35.0% | |
| !!! | GTATATATGTTTTGGCCTTG+TGG | + | chr4_1:41473493-41473512 | Msa0547920:three_prime_UTR | 35.0% |
| GAGACATCAAATTTACCACA+AGG | - | chr4_1:41473511-41473530 | None:intergenic | 35.0% | |
| AATTACGAGGAGAGTAGAAG+AGG | - | chr4_1:41471021-41471040 | None:intergenic | 40.0% | |
| !!! | TAGGAGCCATTTTTTGCAGA+TGG | - | chr4_1:41471135-41471154 | None:intergenic | 40.0% |
| CTGCAAAAAATGGCTCCTAA+AGG | + | chr4_1:41471136-41471155 | Msa0547920:exon | 40.0% | |
| GAGTTTGTAAGCGACTGTTT+AGG | + | chr4_1:41471369-41471388 | Msa0547920:intron | 40.0% | |
| ! | ACAGGATGTAAGGGTAGTTT+TGG | - | chr4_1:41471632-41471651 | None:intergenic | 40.0% |
| AACTACCCTTACATCCTGTT+TGG | + | chr4_1:41471633-41471652 | Msa0547920:intron | 40.0% | |
| GCTTAACCAAACAGGATGTA+AGG | - | chr4_1:41471642-41471661 | None:intergenic | 40.0% | |
| !! | CTTATGCAATGTTTTTGCGC+AGG | + | chr4_1:41472202-41472221 | Msa0547920:intron | 40.0% |
| ! | TTCTAAGAAGACCGATCCAA+AGG | + | chr4_1:41472231-41472250 | Msa0547920:CDS | 40.0% |
| ! | AGGCACTGCTATTAAGAAGA+AGG | + | chr4_1:41472288-41472307 | Msa0547920:CDS | 40.0% |
| ! | CTATCCCTTGTTTGTGTCTT+TGG | - | chr4_1:41472349-41472368 | None:intergenic | 40.0% |
| CAAAGACACAAACAAGGGAT+AGG | + | chr4_1:41472347-41472366 | Msa0547920:CDS | 40.0% | |
| ! | TAGTGGTCAAGCTTGTTTCT+TGG | - | chr4_1:41472403-41472422 | None:intergenic | 40.0% |
| GTCCGCAATGAAGAAAATTG+AGG | + | chr4_1:41472453-41472472 | Msa0547920:CDS | 40.0% | |
| AGAAGGTTAACACCTTGATC+AGG | + | chr4_1:41472566-41472585 | Msa0547920:CDS | 40.0% | |
| CATAAATGCTCACCTGATCA+AGG | - | chr4_1:41472581-41472600 | None:intergenic | 40.0% | |
| !! | TACCCTTCGCATGTTTTGTT+AGG | + | chr4_1:41472680-41472699 | Msa0547920:intron | 40.0% |
| !! | ACCCTTCGCATGTTTTGTTA+GGG | + | chr4_1:41472681-41472700 | Msa0547920:intron | 40.0% |
| ACCCTAACAAAACATGCGAA+GGG | - | chr4_1:41472685-41472704 | None:intergenic | 40.0% | |
| ! | CAGACATACCGAACCATTTT+TGG | + | chr4_1:41472750-41472769 | Msa0547920:intron | 40.0% |
| !!! | ACCGAACCATTTTTGGGTTT+TGG | + | chr4_1:41472757-41472776 | Msa0547920:intron | 40.0% |
| GCCAAAACCCAAAAATGGTT+CGG | - | chr4_1:41472761-41472780 | None:intergenic | 40.0% | |
| !!! | GAACCATTTTTGGGTTTTGG+CGG | + | chr4_1:41472760-41472779 | Msa0547920:intron | 40.0% |
| AAACCGCCAAAACCCAAAAA+TGG | - | chr4_1:41472766-41472785 | None:intergenic | 40.0% | |
| ATAGCATTGCACTGAACTGT+TGG | - | chr4_1:41472924-41472943 | None:intergenic | 40.0% | |
| AGTTCAGTGCAATGCTATCA+GGG | + | chr4_1:41472926-41472945 | Msa0547920:intron | 40.0% | |
| ATCAGGTGTCAACCTAACAT+AGG | - | chr4_1:41473094-41473113 | None:intergenic | 40.0% | |
| ACATCCAATGCATCGTAATC+AGG | - | chr4_1:41473111-41473130 | None:intergenic | 40.0% | |
| AATAGAACCCAGGTAAATCC+AGG | - | chr4_1:41473166-41473185 | None:intergenic | 40.0% | |
| ! | CATAGAATGTTAGCTTGACG+AGG | + | chr4_1:41473398-41473417 | Msa0547920:three_prime_UTR | 40.0% |
| CAAGTCAAGATTGTTCATGG+TGG | - | chr4_1:41473592-41473611 | None:intergenic | 40.0% | |
| GCACAAGTCAAGATTGTTCA+TGG | - | chr4_1:41473595-41473614 | None:intergenic | 40.0% | |
| !! | AAACGGGTTCTAGGGTTTAC+TGG | - | chr4_1:41470961-41470980 | None:intergenic | 45.0% |
| ! | AGAGGAAGAAACGGGTTCTA+GGG | - | chr4_1:41470969-41470988 | None:intergenic | 45.0% |
| CATTAAGGGCCTGTTTGGAT+TGG | - | chr4_1:41471984-41472003 | None:intergenic | 45.0% | |
| TTGTTTGTGTCTTTGGGCGA+TGG | - | chr4_1:41472342-41472361 | None:intergenic | 45.0% | |
| ATCGCCCAAAGACACAAACA+AGG | + | chr4_1:41472341-41472360 | Msa0547920:CDS | 45.0% | |
| TCGCCCAAAGACACAAACAA+GGG | + | chr4_1:41472342-41472361 | Msa0547920:CDS | 45.0% | |
| CACTGATGCGAGGATATTTG+GGG | - | chr4_1:41472375-41472394 | None:intergenic | 45.0% | |
| ! | GCACTGATGCGAGGATATTT+GGG | - | chr4_1:41472376-41472395 | None:intergenic | 45.0% |
| ! | GTCAAGCTTGTTTCTTGGTG+TGG | - | chr4_1:41472398-41472417 | None:intergenic | 45.0% |
| TTTCTTCATTGCGGACTCAG+TGG | - | chr4_1:41472449-41472468 | None:intergenic | 45.0% | |
| CACCCTAACAAAACATGCGA+AGG | - | chr4_1:41472686-41472705 | None:intergenic | 45.0% | |
| !! | CTTCGCATGTTTTGTTAGGG+TGG | + | chr4_1:41472684-41472703 | Msa0547920:intron | 45.0% |
| CAGTTCAGTGCAATGCTATC+AGG | + | chr4_1:41472925-41472944 | Msa0547920:intron | 45.0% | |
| ATGCTATCAGGGTTGGAATC+TGG | + | chr4_1:41472937-41472956 | Msa0547920:intron | 45.0% | |
| ATAGGCCTTCTTGGTACCAT+CGG | - | chr4_1:41473076-41473095 | None:intergenic | 45.0% | |
| GTACCAAGAAGGCCTATGTT+AGG | + | chr4_1:41473079-41473098 | Msa0547920:CDS | 45.0% | |
| CAACCTAACATAGGCCTTCT+TGG | - | chr4_1:41473085-41473104 | None:intergenic | 45.0% | |
| GACACCTGATTACGATGCAT+TGG | + | chr4_1:41473104-41473123 | Msa0547920:CDS | 45.0% | |
| GGATCATCTAAGTCAGTACC+TGG | + | chr4_1:41473145-41473164 | Msa0547920:exon | 45.0% | |
| AGTCAGTACCTGGATTTACC+TGG | + | chr4_1:41473155-41473174 | Msa0547920:exon | 45.0% | |
| GTCAGTACCTGGATTTACCT+GGG | + | chr4_1:41473156-41473175 | Msa0547920:three_prime_UTR | 45.0% | |
| ! | CAGAGGAAGAAACGGGTTCT+AGG | - | chr4_1:41470970-41470989 | None:intergenic | 50.0% |
| GTGGATGCAGAGGAAGAAAC+GGG | - | chr4_1:41470977-41470996 | None:intergenic | 50.0% | |
| GGTGGATGCAGAGGAAGAAA+CGG | - | chr4_1:41470978-41470997 | None:intergenic | 50.0% | |
| CAATGCCTGTGCCTTTGGAT+CGG | - | chr4_1:41472245-41472264 | None:intergenic | 50.0% | |
| GCTTTCAATGCCTGTGCCTT+TGG | - | chr4_1:41472250-41472269 | None:intergenic | 50.0% | |
| !! | ACAGGCATTGAAAGCTGCCA+AGG | + | chr4_1:41472255-41472274 | Msa0547920:CDS | 50.0% |
| !! | GGCACTGATGCGAGGATATT+TGG | - | chr4_1:41472377-41472396 | None:intergenic | 50.0% |
| GTATGACATCCAGGCGAAGA+AGG | + | chr4_1:41472549-41472568 | Msa0547920:CDS | 50.0% | |
| AGGTGTTAACCTTCTTCGCC+TGG | - | chr4_1:41472561-41472580 | None:intergenic | 50.0% | |
| CAGTGCAATGCTATCAGGGT+TGG | + | chr4_1:41472930-41472949 | Msa0547920:intron | 50.0% | |
| TTAATCTGTTGCAGGCCCGA+TGG | + | chr4_1:41473057-41473076 | Msa0547920:intron | 50.0% | |
| TAGGCCTTCTTGGTACCATC+GGG | - | chr4_1:41473075-41473094 | None:intergenic | 50.0% | |
| ! | TTAGCTTGACGAGGCAACTG+AGG | + | chr4_1:41473407-41473426 | Msa0547920:three_prime_UTR | 50.0% |
| GCACTGTGCACAAACCTTCG+CGG | - | chr4_1:41470999-41471018 | None:intergenic | 55.0% | |
| ! | GAAGACCGATCCAAAGGCAC+AGG | + | chr4_1:41472237-41472256 | Msa0547920:CDS | 55.0% |
| ! | AGTGCCTGACTTGACTGCCT+TGG | - | chr4_1:41472275-41472294 | None:intergenic | 55.0% |
| TTGCGGACTCAGTGGTGAGT+GGG | - | chr4_1:41472441-41472460 | None:intergenic | 55.0% | |
| ATTGCGGACTCAGTGGTGAG+TGG | - | chr4_1:41472442-41472461 | None:intergenic | 55.0% | |
| TTCCTCTGCATCCACCGCGA+AGG | + | chr4_1:41470982-41471001 | Msa0547920:five_prime_UTR | 60.0% | |
| AACCTTCGCGGTGGATGCAG+AGG | - | chr4_1:41470987-41471006 | None:intergenic | 60.0% | |
| CTGTGCACAAACCTTCGCGG+TGG | - | chr4_1:41470996-41471015 | None:intergenic | 60.0% | |
| GCTGCCAAGGCAGTCAAGTC+AGG | + | chr4_1:41472268-41472287 | Msa0547920:CDS | 60.0% | |
| !! | CTTGGTGTGGCACTGATGCG+AGG | - | chr4_1:41472385-41472404 | None:intergenic | 60.0% |
| CAGGCCCGATGGTACCAAGA+AGG | + | chr4_1:41473068-41473087 | Msa0547920:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 41470955 | 41473622 | 41470955 | ID=Msa0547920;Name=Msa0547920 |
| chr4_1 | mRNA | 41470955 | 41473622 | 41470955 | ID=Msa0547920-mRNA-1;Parent=Msa0547920;Name=Msa0547920-mRNA-1;_AED=0.02;_eAED=0.02;_QI=88|1|1|1|0.66|0.75|4|467|153 |
| chr4_1 | exon | 41470955 | 41471003 | 41470955 | ID=Msa0547920-mRNA-1:exon:10621;Parent=Msa0547920-mRNA-1 |
| chr4_1 | exon | 41471106 | 41471157 | 41471106 | ID=Msa0547920-mRNA-1:exon:10622;Parent=Msa0547920-mRNA-1 |
| chr4_1 | exon | 41472224 | 41472587 | 41472224 | ID=Msa0547920-mRNA-1:exon:10623;Parent=Msa0547920-mRNA-1 |
| chr4_1 | exon | 41473071 | 41473622 | 41473071 | ID=Msa0547920-mRNA-1:exon:10624;Parent=Msa0547920-mRNA-1 |
| chr4_1 | five_prime_UTR | 41470955 | 41471003 | 41470955 | ID=Msa0547920-mRNA-1:five_prime_utr;Parent=Msa0547920-mRNA-1 |
| chr4_1 | five_prime_UTR | 41471106 | 41471144 | 41471106 | ID=Msa0547920-mRNA-1:five_prime_utr;Parent=Msa0547920-mRNA-1 |
| chr4_1 | CDS | 41471145 | 41471157 | 41471145 | ID=Msa0547920-mRNA-1:cds;Parent=Msa0547920-mRNA-1 |
| chr4_1 | CDS | 41472224 | 41472587 | 41472224 | ID=Msa0547920-mRNA-1:cds;Parent=Msa0547920-mRNA-1 |
| chr4_1 | CDS | 41473071 | 41473155 | 41473071 | ID=Msa0547920-mRNA-1:cds;Parent=Msa0547920-mRNA-1 |
| chr4_1 | three_prime_UTR | 41473156 | 41473622 | 41473156 | ID=Msa0547920-mRNA-1:three_prime_utr;Parent=Msa0547920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
