AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0089540


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0089540 MtrunA17_Chr1g0208141 96.479 284 0 1 1 284 324 597 0.0 538
Msa0089540 MtrunA17_Chr4g0000511 72.438 283 68 1 2 284 358 630 5.12e-145 421
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0089540 AT4G34200.1 82.332 283 40 1 2 284 331 603 1.55e-163 468
Msa0089540 AT3G19480.1 79.225 284 49 1 1 284 315 588 1.68e-159 456
Msa0089540 AT1G17745.1 71.025 283 72 1 2 284 352 624 3.42e-140 409
Msa0089540 AT1G17745.2 71.025 283 72 1 2 284 379 651 7.34e-140 409

Find 98 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTAGTGCCATATCAGATTC+AGG 0.283199 1_2:-71167640 Msa0089540:CDS
GTTCACGAAAACACTGGATA+TGG 0.294301 1_2:+71167795 None:intergenic
TGGAATGAATTGTGATTTAC+TGG 0.300026 1_2:-71167158 Msa0089540:three_prime_UTR
CAAGCGAGTAGGTGAGTTTA+GGG 0.302152 1_2:-71167209 Msa0089540:three_prime_UTR
TGTTGATCTTGCTGAGAAAC+TGG 0.306465 1_2:-71167953 Msa0089540:CDS
ACAAGCGAGTAGGTGAGTTT+AGG 0.325630 1_2:-71167210 Msa0089540:three_prime_UTR
AAGGTAGCATTATACTTTGC+AGG 0.338794 1_2:-71167534 Msa0089540:CDS
TTTCAATAGCTACACCTTCC+TGG 0.368868 1_2:+71168539 None:intergenic
GAGGAGAGAGTTATTCTTGA+TGG 0.369656 1_2:-71167724 Msa0089540:CDS
GACCTCCCCTGAATCTGATA+TGG 0.384239 1_2:+71167633 None:intergenic
GAGATTCCACGTTAGCAATC+TGG 0.405437 1_2:+71167668 None:intergenic
AGACGAGTGTCAAGATCATC+AGG 0.412057 1_2:+71167853 None:intergenic
CCCACCTTTCCAATCATACC+TGG 0.415387 1_2:+71167499 None:intergenic
CCACGTTAGCAATCTGGACT+TGG 0.423183 1_2:+71167674 None:intergenic
CAACGATGGTACATCAAAAC+CGG 0.424053 1_2:+71167234 None:intergenic
GGAAAGGTGGGAAGCATCTT+GGG 0.427465 1_2:-71167487 Msa0089540:CDS
GTAGATCAACCAGGTATGAT+TGG 0.432608 1_2:-71167508 Msa0089540:CDS
AAATAGCAGAAGCTGTCGTT+GGG 0.435352 1_2:-71168519 Msa0089540:CDS
TGGAAAGGTGGGAAGCATCT+TGG 0.437963 1_2:-71167488 Msa0089540:CDS
GGGTAGGTTGGCTGTCCAAC+TGG 0.450313 1_2:-71167932 Msa0089540:CDS
TTCAGGGGAGGTCACGGTGG+AGG 0.452073 1_2:-71167623 Msa0089540:CDS
GGAAAAGAATAATGTAACTT+TGG 0.460296 1_2:-71167178 Msa0089540:three_prime_UTR
ATGAATTCAAGTGGATTCTC+AGG 0.462448 1_2:+71167697 None:intergenic
AAAGAATCTTTGCAAAGGAT+TGG 0.466060 1_2:-71167370 Msa0089540:CDS
AAGCAGGCTGTGATGGCAAT+TGG 0.470416 1_2:-71167412 Msa0089540:CDS
CTGTCGTTGGGGCTTTGAAA+GGG 0.476987 1_2:-71168507 Msa0089540:CDS
ACATTTAATCTTACAACTTG+AGG 0.482522 1_2:+71167317 None:intergenic
AAGATCCAACCTTTGTAAGA+TGG 0.485383 1_2:+71167578 None:intergenic
GTAACTTACCTGAGCTTCCA+TGG 0.486993 1_2:+71168642 None:intergenic
TTCTCAGCAAGATCAACAAA+TGG 0.487878 1_2:+71167958 None:intergenic
AGATCCAACCTTTGTAAGAT+GGG 0.489776 1_2:+71167579 None:intergenic
AAAACAAATTCTTCAACAGC+AGG 0.493626 1_2:+71167340 None:intergenic
GCCATCACAGCCTGCTTGCG+TGG 0.497834 1_2:+71167418 None:intergenic
TGCCAGTACCATGGAAGCTC+AGG 0.500424 1_2:-71168650 Msa0089540:intron
GAAATAGCAGAAGCTGTCGT+TGG 0.503793 1_2:-71168520 Msa0089540:CDS
TCCACGCAAGCAGGCTGTGA+TGG 0.504167 1_2:-71167419 Msa0089540:CDS
TTCACGAAAACACTGGATAT+GGG 0.506220 1_2:+71167796 None:intergenic
GTTACTGCAACACCTCATCT+TGG 0.506235 1_2:-71168673 Msa0089540:CDS
TACCTGAGCTTCCATGGTAC+TGG 0.508674 1_2:+71168648 None:intergenic
TTGGCTGTCCAACTGGTAGC+AGG 0.509470 1_2:-71167925 Msa0089540:CDS
ATATGTCTGGCTGATGTGCC+CGG 0.510140 1_2:-71167253 Msa0089540:three_prime_UTR
GCTGTCGTTGGGGCTTTGAA+AGG 0.514440 1_2:-71168508 Msa0089540:CDS
TGCTGAGAAACTGGGTAGGT+TGG 0.518778 1_2:-71167944 Msa0089540:CDS
TCAGGGGAGGTCACGGTGGA+GGG 0.520156 1_2:-71167622 Msa0089540:CDS
CTAGTGCCATATCAGATTCA+GGG 0.520803 1_2:-71167639 Msa0089540:CDS
AGCGAGTAGGTGAGTTTAGG+GGG 0.522975 1_2:-71167207 Msa0089540:three_prime_UTR
ACCAGGTATGATTGGAAAGG+TGG 0.534240 1_2:-71167500 Msa0089540:CDS
AAGGATTGCTCCACGCAAGC+AGG 0.534675 1_2:-71167428 Msa0089540:CDS
CGCTTCCTCCTGCTACCAGT+TGG 0.547036 1_2:+71167917 None:intergenic
CCAAGTCCAGATTGCTAACG+TGG 0.553204 1_2:-71167674 Msa0089540:CDS
TACTGCAGTCAATGCACCAA+TGG 0.553293 1_2:-71168473 Msa0089540:CDS
ATCAGATTCAGGGGAGGTCA+CGG 0.555338 1_2:-71167629 Msa0089540:CDS
CACGGTGGAGGGTCGTGTGA+AGG 0.556967 1_2:-71167611 Msa0089540:CDS
AACCTTTGAAAATGATGACC+AGG 0.563129 1_2:-71168557 Msa0089540:CDS
CTTCGTGCTATGATAACAAA+GGG 0.568014 1_2:-71167829 Msa0089540:CDS
CTTTGCAAAGATTCTTTGCG+TGG 0.570600 1_2:+71167376 None:intergenic
AAGTGACTTACGCTTCCGCT+AGG 0.571734 1_2:-71167879 Msa0089540:CDS
TAAAGGGAATAACAGTGTGT+TGG 0.572631 1_2:-71167097 Msa0089540:three_prime_UTR
GAAGTTGATGTGAGTTTGGA+AGG 0.575576 1_2:-71167553 Msa0089540:CDS
AATGTCAGCTTCATGAGTGT+TGG 0.576599 1_2:-71167451 Msa0089540:CDS
TGTCGTTGGGGCTTTGAAAG+GGG 0.577535 1_2:-71168506 Msa0089540:CDS
CAACTGGTAGCAGGAGGAAG+CGG 0.583181 1_2:-71167916 Msa0089540:CDS
CCAGGTATGATTGGAAAGGT+GGG 0.583244 1_2:-71167499 Msa0089540:CDS
GTGGAGGGTCGTGTGAAGGA+TGG 0.585025 1_2:-71167607 Msa0089540:CDS
AGCACCTCTGAGGAAACCAT+TGG 0.591640 1_2:+71168457 None:intergenic
GACTTCACTGCTAAACAAAG+AGG 0.591938 1_2:-71167760 Msa0089540:CDS
TGGACTTGGATGAATTCAAG+TGG 0.592769 1_2:+71167688 None:intergenic
TCTTCGTGCTATGATAACAA+AGG 0.593071 1_2:-71167830 Msa0089540:CDS
GATCCAACCTTTGTAAGATG+GGG 0.598278 1_2:+71167580 None:intergenic
TCAGCTTCATGAGTGTTGGA+AGG 0.600265 1_2:-71167447 Msa0089540:CDS
AGTGACTTACGCTTCCGCTA+GGG 0.601349 1_2:-71167878 Msa0089540:CDS
CACGCAAAGAATCTTTGCAA+AGG 0.603720 1_2:-71167375 Msa0089540:CDS
TCATCTTGGTGCCAGTACCA+TGG 0.610967 1_2:-71168659 Msa0089540:CDS
TGCACCAATGGTTTCCTCAG+AGG 0.611627 1_2:-71168461 Msa0089540:intron
ATGGTACTGGCACCAAGATG+AGG 0.614100 1_2:+71168661 None:intergenic
AAGCGAGTAGGTGAGTTTAG+GGG 0.620960 1_2:-71167208 Msa0089540:three_prime_UTR
AACTAAGTTCACGAAAACAC+TGG 0.623332 1_2:+71167789 None:intergenic
AACGATGGTACATCAAAACC+GGG 0.629832 1_2:+71167235 None:intergenic
TCAACCAGGTATGATTGGAA+AGG 0.630443 1_2:-71167503 Msa0089540:CDS
GTTGATCTTGCTGAGAAACT+GGG 0.632655 1_2:-71167952 Msa0089540:CDS
CCATCGTTGAACAAGCGAGT+AGG 0.640090 1_2:-71167220 Msa0089540:three_prime_UTR
CGAGTAGGTGAGTTTAGGGG+GGG 0.654008 1_2:-71167205 Msa0089540:three_prime_UTR
ACTTCACTGCTAAACAAAGA+GGG 0.657467 1_2:-71167759 Msa0089540:CDS
ATCCAACCTTTGTAAGATGG+GGG 0.663549 1_2:+71167581 None:intergenic
TAGTGCCATATCAGATTCAG+GGG 0.665071 1_2:-71167638 Msa0089540:CDS
GACGAGTGTCAAGATCATCA+GGG 0.667404 1_2:+71167854 None:intergenic
AAGATCATCAGGGGCCCTAG+CGG 0.668439 1_2:+71167864 None:intergenic
AAGAGGGCTAAGAATTACTG+AGG 0.668513 1_2:-71167743 Msa0089540:CDS
TGCAGGCAAGTAGATCAACC+AGG 0.669453 1_2:-71167517 Msa0089540:CDS
AGATTCAGGGGAGGTCACGG+TGG 0.674117 1_2:-71167626 Msa0089540:CDS
TTTGAAAATGATGACCAGGA+AGG 0.675546 1_2:-71168553 Msa0089540:CDS
GCTGTCCAACTGGTAGCAGG+AGG 0.676150 1_2:-71167922 Msa0089540:CDS
ACGAGTGTCAAGATCATCAG+GGG 0.682389 1_2:+71167855 None:intergenic
CCTACTCGCTTGTTCAACGA+TGG 0.683942 1_2:+71167220 None:intergenic
TGCCATATCAGATTCAGGGG+AGG 0.684990 1_2:-71167635 Msa0089540:CDS
GCGAGTAGGTGAGTTTAGGG+GGG 0.690985 1_2:-71167206 Msa0089540:three_prime_UTR
AATAGCAGAAGCTGTCGTTG+GGG 0.700433 1_2:-71168518 Msa0089540:CDS
ATCTTGCTGAGAAACTGGGT+AGG 0.734226 1_2:-71167948 Msa0089540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTATCATGAAATAAA+AGG + chr1_2:71167356-71167375 None:intergenic 10.0%
!!! TATTTTTATCATGAAATAAA+AGG + chr1_2:71167356-71167375 None:intergenic 10.0%
!!! TTTACTATTTAGAATGATTT+TGG + chr1_2:71167440-71167459 None:intergenic 15.0%
!!! TTTCTGTTGTATTTTATTTT+TGG - chr1_2:71168481-71168500 Msa0089540:CDS 15.0%
!!! TTGTATTTTATTTTTGGATT+GGG - chr1_2:71168487-71168506 Msa0089540:CDS 15.0%
!!! TCATTTTTATTTGGAAATAA+AGG - chr1_2:71168650-71168669 Msa0089540:intron 15.0%
!!! CATTTTTATTTGGAAATAAA+GGG - chr1_2:71168651-71168670 Msa0089540:CDS 15.0%
!!! TTTACTATTTAGAATGATTT+TGG + chr1_2:71167440-71167459 None:intergenic 15.0%
!!! TTTCTGTTGTATTTTATTTT+TGG - chr1_2:71168481-71168500 Msa0089540:CDS 15.0%
!!! TTGTATTTTATTTTTGGATT+GGG - chr1_2:71168487-71168506 Msa0089540:CDS 15.0%
!!! TCATTTTTATTTGGAAATAA+AGG - chr1_2:71168650-71168669 Msa0089540:intron 15.0%
!!! CATTTTTATTTGGAAATAAA+GGG - chr1_2:71168651-71168670 Msa0089540:CDS 15.0%
!!! TCGTTTTCAATATATGAATA+TGG + chr1_2:71167483-71167502 None:intergenic 20.0%
!!! TCATATATTGAAAACGATTT+TGG - chr1_2:71167486-71167505 Msa0089540:CDS 20.0%
!!! GTTGTATTTTATTTTTGGAT+TGG - chr1_2:71168486-71168505 Msa0089540:CDS 20.0%
!!! TCGTTTTCAATATATGAATA+TGG + chr1_2:71167483-71167502 None:intergenic 20.0%
!!! TCATATATTGAAAACGATTT+TGG - chr1_2:71167486-71167505 Msa0089540:CDS 20.0%
!!! GTTGTATTTTATTTTTGGAT+TGG - chr1_2:71168486-71168505 Msa0089540:CDS 20.0%
! ATATTGCTTGGATATAGATA+AGG + chr1_2:71167412-71167431 None:intergenic 25.0%
! TTATCTATATCCAAGCAATA+TGG - chr1_2:71167411-71167430 Msa0089540:CDS 25.0%
!!! AAAACGATTTTGGAACAAAA+TGG - chr1_2:71167496-71167515 Msa0089540:CDS 25.0%
!!! AGTATTTAATTTGAACCAGT+TGG + chr1_2:71167557-71167576 None:intergenic 25.0%
! ATTAAATACTACTCAAGTGA+AGG - chr1_2:71167567-71167586 Msa0089540:CDS 25.0%
! GATTTGAGAAATCTAATACA+TGG - chr1_2:71167599-71167618 Msa0089540:CDS 25.0%
!!! CTTAATGAGTTTTTTTTGCT+CGG - chr1_2:71167624-71167643 Msa0089540:CDS 25.0%
! TCCTAATACAAAATGATTCA+TGG - chr1_2:71167689-71167708 Msa0089540:CDS 25.0%
!! TCCATGAATCATTTTGTATT+AGG + chr1_2:71167693-71167712 None:intergenic 25.0%
! ATACAAAATGATTCATGGAT+TGG - chr1_2:71167694-71167713 Msa0089540:CDS 25.0%
! ACATTTAATCTTACAACTTG+AGG + chr1_2:71168450-71168469 None:intergenic 25.0%
! GGAAAAGAATAATGTAACTT+TGG - chr1_2:71168586-71168605 Msa0089540:intron 25.0%
!!! CATGCTTGTTCATTTTTATT+TGG - chr1_2:71168641-71168660 Msa0089540:intron 25.0%
! ATATTGCTTGGATATAGATA+AGG + chr1_2:71167412-71167431 None:intergenic 25.0%
! TTATCTATATCCAAGCAATA+TGG - chr1_2:71167411-71167430 Msa0089540:CDS 25.0%
!!! AAAACGATTTTGGAACAAAA+TGG - chr1_2:71167496-71167515 Msa0089540:CDS 25.0%
!!! AGTATTTAATTTGAACCAGT+TGG + chr1_2:71167557-71167576 None:intergenic 25.0%
! ATTAAATACTACTCAAGTGA+AGG - chr1_2:71167567-71167586 Msa0089540:CDS 25.0%
! GATTTGAGAAATCTAATACA+TGG - chr1_2:71167599-71167618 Msa0089540:CDS 25.0%
!!! CTTAATGAGTTTTTTTTGCT+CGG - chr1_2:71167624-71167643 Msa0089540:CDS 25.0%
! TCCTAATACAAAATGATTCA+TGG - chr1_2:71167689-71167708 Msa0089540:CDS 25.0%
!! TCCATGAATCATTTTGTATT+AGG + chr1_2:71167693-71167712 None:intergenic 25.0%
! ATACAAAATGATTCATGGAT+TGG - chr1_2:71167694-71167713 Msa0089540:CDS 25.0%
! ACATTTAATCTTACAACTTG+AGG + chr1_2:71168450-71168469 None:intergenic 25.0%
! GGAAAAGAATAATGTAACTT+TGG - chr1_2:71168586-71168605 Msa0089540:intron 25.0%
!!! CATGCTTGTTCATTTTTATT+TGG - chr1_2:71168641-71168660 Msa0089540:intron 25.0%
AAGCTATAACTCATAGTCAT+AGG + chr1_2:71167159-71167178 None:intergenic 30.0%
TTTCAAAGGTTATTAGACAC+TGG + chr1_2:71167198-71167217 None:intergenic 30.0%
!! ATTTTGGAAACCATATTGCT+TGG + chr1_2:71167424-71167443 None:intergenic 30.0%
!! ATTGGAGTTGGTGATAAATT+TGG - chr1_2:71167712-71167731 Msa0089540:CDS 30.0%
!!! TTTTGAAGTTGATGTGAGTT+TGG - chr1_2:71168207-71168226 Msa0089540:intron 30.0%
AAAGAATCTTTGCAAAGGAT+TGG - chr1_2:71168394-71168413 Msa0089540:intron 30.0%
AAAACAAATTCTTCAACAGC+AGG + chr1_2:71168427-71168446 None:intergenic 30.0%
TGGAATGAATTGTGATTTAC+TGG - chr1_2:71168606-71168625 Msa0089540:intron 30.0%
AAGCTATAACTCATAGTCAT+AGG + chr1_2:71167159-71167178 None:intergenic 30.0%
TTTCAAAGGTTATTAGACAC+TGG + chr1_2:71167198-71167217 None:intergenic 30.0%
!! ATTTTGGAAACCATATTGCT+TGG + chr1_2:71167424-71167443 None:intergenic 30.0%
!! ATTGGAGTTGGTGATAAATT+TGG - chr1_2:71167712-71167731 Msa0089540:CDS 30.0%
!!! TTTTGAAGTTGATGTGAGTT+TGG - chr1_2:71168207-71168226 Msa0089540:intron 30.0%
AAAGAATCTTTGCAAAGGAT+TGG - chr1_2:71168394-71168413 Msa0089540:intron 30.0%
AAAACAAATTCTTCAACAGC+AGG + chr1_2:71168427-71168446 None:intergenic 30.0%
TGGAATGAATTGTGATTTAC+TGG - chr1_2:71168606-71168625 Msa0089540:intron 30.0%
ATAGTCATAGGCAATTGCTT+AGG + chr1_2:71167147-71167166 None:intergenic 35.0%
! AACCTTTGAAAATGATGACC+AGG - chr1_2:71167207-71167226 Msa0089540:three_prime_UTR 35.0%
! TTCCTGGTCATCATTTTCAA+AGG + chr1_2:71167212-71167231 None:intergenic 35.0%
TTTGAAAATGATGACCAGGA+AGG - chr1_2:71167211-71167230 Msa0089540:three_prime_UTR 35.0%
AGTAACAATATCAAGAGGCA+AGG + chr1_2:71167380-71167399 None:intergenic 35.0%
GAAGCAGTAACAATATCAAG+AGG + chr1_2:71167385-71167404 None:intergenic 35.0%
GATAAAGCCAGCTTCAAAAT+TGG + chr1_2:71167660-71167679 None:intergenic 35.0%
!! AATGATTCATGGATTGGAGT+TGG - chr1_2:71167700-71167719 Msa0089540:CDS 35.0%
TTCTCAGCAAGATCAACAAA+TGG + chr1_2:71167809-71167828 None:intergenic 35.0%
TCTTCGTGCTATGATAACAA+AGG - chr1_2:71167934-71167953 Msa0089540:CDS 35.0%
CTTCGTGCTATGATAACAAA+GGG - chr1_2:71167935-71167954 Msa0089540:CDS 35.0%
TTCACGAAAACACTGGATAT+GGG + chr1_2:71167971-71167990 None:intergenic 35.0%
AACTAAGTTCACGAAAACAC+TGG + chr1_2:71167978-71167997 None:intergenic 35.0%
ACTTCACTGCTAAACAAAGA+GGG - chr1_2:71168005-71168024 Msa0089540:intron 35.0%
! ATGAATTCAAGTGGATTCTC+AGG + chr1_2:71168070-71168089 None:intergenic 35.0%
AGATCCAACCTTTGTAAGAT+GGG + chr1_2:71168188-71168207 None:intergenic 35.0%
AAGATCCAACCTTTGTAAGA+TGG + chr1_2:71168189-71168208 None:intergenic 35.0%
AAGGTAGCATTATACTTTGC+AGG - chr1_2:71168230-71168249 Msa0089540:intron 35.0%
TAAAGGGAATAACAGTGTGT+TGG - chr1_2:71168667-71168686 Msa0089540:CDS 35.0%
ATAGTCATAGGCAATTGCTT+AGG + chr1_2:71167147-71167166 None:intergenic 35.0%
! AACCTTTGAAAATGATGACC+AGG - chr1_2:71167207-71167226 Msa0089540:three_prime_UTR 35.0%
! TTCCTGGTCATCATTTTCAA+AGG + chr1_2:71167212-71167231 None:intergenic 35.0%
TTTGAAAATGATGACCAGGA+AGG - chr1_2:71167211-71167230 Msa0089540:three_prime_UTR 35.0%
AGTAACAATATCAAGAGGCA+AGG + chr1_2:71167380-71167399 None:intergenic 35.0%
GAAGCAGTAACAATATCAAG+AGG + chr1_2:71167385-71167404 None:intergenic 35.0%
GATAAAGCCAGCTTCAAAAT+TGG + chr1_2:71167660-71167679 None:intergenic 35.0%
!! AATGATTCATGGATTGGAGT+TGG - chr1_2:71167700-71167719 Msa0089540:CDS 35.0%
TTCTCAGCAAGATCAACAAA+TGG + chr1_2:71167809-71167828 None:intergenic 35.0%
TCTTCGTGCTATGATAACAA+AGG - chr1_2:71167934-71167953 Msa0089540:CDS 35.0%
CTTCGTGCTATGATAACAAA+GGG - chr1_2:71167935-71167954 Msa0089540:CDS 35.0%
TTCACGAAAACACTGGATAT+GGG + chr1_2:71167971-71167990 None:intergenic 35.0%
AACTAAGTTCACGAAAACAC+TGG + chr1_2:71167978-71167997 None:intergenic 35.0%
ACTTCACTGCTAAACAAAGA+GGG - chr1_2:71168005-71168024 Msa0089540:intron 35.0%
! ATGAATTCAAGTGGATTCTC+AGG + chr1_2:71168070-71168089 None:intergenic 35.0%
AGATCCAACCTTTGTAAGAT+GGG + chr1_2:71168188-71168207 None:intergenic 35.0%
AAGATCCAACCTTTGTAAGA+TGG + chr1_2:71168189-71168208 None:intergenic 35.0%
AAGGTAGCATTATACTTTGC+AGG - chr1_2:71168230-71168249 Msa0089540:intron 35.0%
TAAAGGGAATAACAGTGTGT+TGG - chr1_2:71168667-71168686 Msa0089540:CDS 35.0%
ATTAGACACTGGTGGCAAAA+GGG + chr1_2:71167187-71167206 None:intergenic 40.0%
TATTAGACACTGGTGGCAAA+AGG + chr1_2:71167188-71167207 None:intergenic 40.0%
CAAAGGTTATTAGACACTGG+TGG + chr1_2:71167195-71167214 None:intergenic 40.0%
TTTCAATAGCTACACCTTCC+TGG + chr1_2:71167228-71167247 None:intergenic 40.0%
AAATAGCAGAAGCTGTCGTT+GGG - chr1_2:71167245-71167264 Msa0089540:three_prime_UTR 40.0%
!!! TATCCCTCCAATTTTGAAGC+TGG - chr1_2:71167650-71167669 Msa0089540:CDS 40.0%
AAGCCAGCTTCAAAATTGGA+GGG + chr1_2:71167656-71167675 None:intergenic 40.0%
AAAGCCAGCTTCAAAATTGG+AGG + chr1_2:71167657-71167676 None:intergenic 40.0%
! TTGGTGATAAATTTGGCGAC+TGG - chr1_2:71167719-71167738 Msa0089540:CDS 40.0%
! TTCATTCCTTTGTGACTTGC+AGG - chr1_2:71167766-71167785 Msa0089540:CDS 40.0%
TTAACACCTGCAAGTCACAA+AGG + chr1_2:71167775-71167794 None:intergenic 40.0%
TGTTGATCTTGCTGAGAAAC+TGG - chr1_2:71167811-71167830 Msa0089540:CDS 40.0%
GTTGATCTTGCTGAGAAACT+GGG - chr1_2:71167812-71167831 Msa0089540:CDS 40.0%
GTTCACGAAAACACTGGATA+TGG + chr1_2:71167972-71167991 None:intergenic 40.0%
GACTTCACTGCTAAACAAAG+AGG - chr1_2:71168004-71168023 Msa0089540:intron 40.0%
AAGAGGGCTAAGAATTACTG+AGG - chr1_2:71168021-71168040 Msa0089540:intron 40.0%
GAGGAGAGAGTTATTCTTGA+TGG - chr1_2:71168040-71168059 Msa0089540:intron 40.0%
TGGACTTGGATGAATTCAAG+TGG + chr1_2:71168079-71168098 None:intergenic 40.0%
CTAGTGCCATATCAGATTCA+GGG - chr1_2:71168125-71168144 Msa0089540:intron 40.0%
TAGTGCCATATCAGATTCAG+GGG - chr1_2:71168126-71168145 Msa0089540:intron 40.0%
ATCCAACCTTTGTAAGATGG+GGG + chr1_2:71168186-71168205 None:intergenic 40.0%
GATCCAACCTTTGTAAGATG+GGG + chr1_2:71168187-71168206 None:intergenic 40.0%
!! GAAGTTGATGTGAGTTTGGA+AGG - chr1_2:71168211-71168230 Msa0089540:intron 40.0%
GTAGATCAACCAGGTATGAT+TGG - chr1_2:71168256-71168275 Msa0089540:intron 40.0%
TCAACCAGGTATGATTGGAA+AGG - chr1_2:71168261-71168280 Msa0089540:intron 40.0%
AATGTCAGCTTCATGAGTGT+TGG - chr1_2:71168313-71168332 Msa0089540:intron 40.0%
CTTTGCAAAGATTCTTTGCG+TGG + chr1_2:71168391-71168410 None:intergenic 40.0%
CACGCAAAGAATCTTTGCAA+AGG - chr1_2:71168389-71168408 Msa0089540:intron 40.0%
!! TTTTGGATTGGGCATATGTC+TGG - chr1_2:71168498-71168517 Msa0089540:CDS 40.0%
AACGATGGTACATCAAAACC+GGG + chr1_2:71168532-71168551 None:intergenic 40.0%
CAACGATGGTACATCAAAAC+CGG + chr1_2:71168533-71168552 None:intergenic 40.0%
ATTAGACACTGGTGGCAAAA+GGG + chr1_2:71167187-71167206 None:intergenic 40.0%
TATTAGACACTGGTGGCAAA+AGG + chr1_2:71167188-71167207 None:intergenic 40.0%
CAAAGGTTATTAGACACTGG+TGG + chr1_2:71167195-71167214 None:intergenic 40.0%
TTTCAATAGCTACACCTTCC+TGG + chr1_2:71167228-71167247 None:intergenic 40.0%
AAATAGCAGAAGCTGTCGTT+GGG - chr1_2:71167245-71167264 Msa0089540:three_prime_UTR 40.0%
!!! TATCCCTCCAATTTTGAAGC+TGG - chr1_2:71167650-71167669 Msa0089540:CDS 40.0%
AAGCCAGCTTCAAAATTGGA+GGG + chr1_2:71167656-71167675 None:intergenic 40.0%
AAAGCCAGCTTCAAAATTGG+AGG + chr1_2:71167657-71167676 None:intergenic 40.0%
! TTGGTGATAAATTTGGCGAC+TGG - chr1_2:71167719-71167738 Msa0089540:CDS 40.0%
! TTCATTCCTTTGTGACTTGC+AGG - chr1_2:71167766-71167785 Msa0089540:CDS 40.0%
TTAACACCTGCAAGTCACAA+AGG + chr1_2:71167775-71167794 None:intergenic 40.0%
TGTTGATCTTGCTGAGAAAC+TGG - chr1_2:71167811-71167830 Msa0089540:CDS 40.0%
GTTGATCTTGCTGAGAAACT+GGG - chr1_2:71167812-71167831 Msa0089540:CDS 40.0%
GTTCACGAAAACACTGGATA+TGG + chr1_2:71167972-71167991 None:intergenic 40.0%
GACTTCACTGCTAAACAAAG+AGG - chr1_2:71168004-71168023 Msa0089540:intron 40.0%
AAGAGGGCTAAGAATTACTG+AGG - chr1_2:71168021-71168040 Msa0089540:intron 40.0%
GAGGAGAGAGTTATTCTTGA+TGG - chr1_2:71168040-71168059 Msa0089540:intron 40.0%
TGGACTTGGATGAATTCAAG+TGG + chr1_2:71168079-71168098 None:intergenic 40.0%
CTAGTGCCATATCAGATTCA+GGG - chr1_2:71168125-71168144 Msa0089540:intron 40.0%
TAGTGCCATATCAGATTCAG+GGG - chr1_2:71168126-71168145 Msa0089540:intron 40.0%
ATCCAACCTTTGTAAGATGG+GGG + chr1_2:71168186-71168205 None:intergenic 40.0%
GATCCAACCTTTGTAAGATG+GGG + chr1_2:71168187-71168206 None:intergenic 40.0%
!! GAAGTTGATGTGAGTTTGGA+AGG - chr1_2:71168211-71168230 Msa0089540:intron 40.0%
GTAGATCAACCAGGTATGAT+TGG - chr1_2:71168256-71168275 Msa0089540:intron 40.0%
TCAACCAGGTATGATTGGAA+AGG - chr1_2:71168261-71168280 Msa0089540:intron 40.0%
AATGTCAGCTTCATGAGTGT+TGG - chr1_2:71168313-71168332 Msa0089540:intron 40.0%
CTTTGCAAAGATTCTTTGCG+TGG + chr1_2:71168391-71168410 None:intergenic 40.0%
CACGCAAAGAATCTTTGCAA+AGG - chr1_2:71168389-71168408 Msa0089540:intron 40.0%
!! TTTTGGATTGGGCATATGTC+TGG - chr1_2:71168498-71168517 Msa0089540:CDS 40.0%
AACGATGGTACATCAAAACC+GGG + chr1_2:71168532-71168551 None:intergenic 40.0%
CAACGATGGTACATCAAAAC+CGG + chr1_2:71168533-71168552 None:intergenic 40.0%
GTTACTGCAACACCTCATCT+TGG - chr1_2:71167091-71167110 Msa0089540:three_prime_UTR 45.0%
GTAACTTACCTGAGCTTCCA+TGG + chr1_2:71167125-71167144 None:intergenic 45.0%
TTAGACACTGGTGGCAAAAG+GGG + chr1_2:71167186-71167205 None:intergenic 45.0%
GAAATAGCAGAAGCTGTCGT+TGG - chr1_2:71167244-71167263 Msa0089540:three_prime_UTR 45.0%
AATAGCAGAAGCTGTCGTTG+GGG - chr1_2:71167246-71167265 Msa0089540:three_prime_UTR 45.0%
TACTGCAGTCAATGCACCAA+TGG - chr1_2:71167291-71167310 Msa0089540:three_prime_UTR 45.0%
! TTTTGTTCCTAGCACCTCTG+AGG + chr1_2:71167320-71167339 None:intergenic 45.0%
TCAACTGCTATGTGTCCAAC+TGG - chr1_2:71167539-71167558 Msa0089540:CDS 45.0%
ATCTTGCTGAGAAACTGGGT+AGG - chr1_2:71167816-71167835 Msa0089540:CDS 45.0%
ACGAGTGTCAAGATCATCAG+GGG + chr1_2:71167912-71167931 None:intergenic 45.0%
GACGAGTGTCAAGATCATCA+GGG + chr1_2:71167913-71167932 None:intergenic 45.0%
AGACGAGTGTCAAGATCATC+AGG + chr1_2:71167914-71167933 None:intergenic 45.0%
GAGATTCCACGTTAGCAATC+TGG + chr1_2:71168099-71168118 None:intergenic 45.0%
GCTAGTGCCATATCAGATTC+AGG - chr1_2:71168124-71168143 Msa0089540:intron 45.0%
ACCAGGTATGATTGGAAAGG+TGG - chr1_2:71168264-71168283 Msa0089540:intron 45.0%
CCAGGTATGATTGGAAAGGT+GGG - chr1_2:71168265-71168284 Msa0089540:intron 45.0%
!! TCAGCTTCATGAGTGTTGGA+AGG - chr1_2:71168317-71168336 Msa0089540:intron 45.0%
ACAAGCGAGTAGGTGAGTTT+AGG - chr1_2:71168554-71168573 Msa0089540:CDS 45.0%
CAAGCGAGTAGGTGAGTTTA+GGG - chr1_2:71168555-71168574 Msa0089540:CDS 45.0%
AAGCGAGTAGGTGAGTTTAG+GGG - chr1_2:71168556-71168575 Msa0089540:CDS 45.0%
GTTACTGCAACACCTCATCT+TGG - chr1_2:71167091-71167110 Msa0089540:three_prime_UTR 45.0%
GTAACTTACCTGAGCTTCCA+TGG + chr1_2:71167125-71167144 None:intergenic 45.0%
TTAGACACTGGTGGCAAAAG+GGG + chr1_2:71167186-71167205 None:intergenic 45.0%
GAAATAGCAGAAGCTGTCGT+TGG - chr1_2:71167244-71167263 Msa0089540:three_prime_UTR 45.0%
AATAGCAGAAGCTGTCGTTG+GGG - chr1_2:71167246-71167265 Msa0089540:three_prime_UTR 45.0%
TACTGCAGTCAATGCACCAA+TGG - chr1_2:71167291-71167310 Msa0089540:three_prime_UTR 45.0%
! TTTTGTTCCTAGCACCTCTG+AGG + chr1_2:71167320-71167339 None:intergenic 45.0%
TCAACTGCTATGTGTCCAAC+TGG - chr1_2:71167539-71167558 Msa0089540:CDS 45.0%
ATCTTGCTGAGAAACTGGGT+AGG - chr1_2:71167816-71167835 Msa0089540:CDS 45.0%
ACGAGTGTCAAGATCATCAG+GGG + chr1_2:71167912-71167931 None:intergenic 45.0%
GACGAGTGTCAAGATCATCA+GGG + chr1_2:71167913-71167932 None:intergenic 45.0%
AGACGAGTGTCAAGATCATC+AGG + chr1_2:71167914-71167933 None:intergenic 45.0%
GAGATTCCACGTTAGCAATC+TGG + chr1_2:71168099-71168118 None:intergenic 45.0%
GCTAGTGCCATATCAGATTC+AGG - chr1_2:71168124-71168143 Msa0089540:intron 45.0%
ACCAGGTATGATTGGAAAGG+TGG - chr1_2:71168264-71168283 Msa0089540:intron 45.0%
CCAGGTATGATTGGAAAGGT+GGG - chr1_2:71168265-71168284 Msa0089540:intron 45.0%
!! TCAGCTTCATGAGTGTTGGA+AGG - chr1_2:71168317-71168336 Msa0089540:intron 45.0%
ACAAGCGAGTAGGTGAGTTT+AGG - chr1_2:71168554-71168573 Msa0089540:CDS 45.0%
CAAGCGAGTAGGTGAGTTTA+GGG - chr1_2:71168555-71168574 Msa0089540:CDS 45.0%
AAGCGAGTAGGTGAGTTTAG+GGG - chr1_2:71168556-71168575 Msa0089540:CDS 45.0%
!! ATGGTACTGGCACCAAGATG+AGG + chr1_2:71167106-71167125 None:intergenic 50.0%
!! TCATCTTGGTGCCAGTACCA+TGG - chr1_2:71167105-71167124 Msa0089540:three_prime_UTR 50.0%
TACCTGAGCTTCCATGGTAC+TGG + chr1_2:71167119-71167138 None:intergenic 50.0%
!! CTGTCGTTGGGGCTTTGAAA+GGG - chr1_2:71167257-71167276 Msa0089540:three_prime_UTR 50.0%
!! TGTCGTTGGGGCTTTGAAAG+GGG - chr1_2:71167258-71167277 Msa0089540:three_prime_UTR 50.0%
TGCACCAATGGTTTCCTCAG+AGG - chr1_2:71167303-71167322 Msa0089540:three_prime_UTR 50.0%
! AGCACCTCTGAGGAAACCAT+TGG + chr1_2:71167310-71167329 None:intergenic 50.0%
!! ATGGTTTCCTCAGAGGTGCT+AGG - chr1_2:71167310-71167329 Msa0089540:exon 50.0%
TGCTGAGAAACTGGGTAGGT+TGG - chr1_2:71167820-71167839 Msa0089540:CDS 50.0%
AAGTGACTTACGCTTCCGCT+AGG - chr1_2:71167885-71167904 Msa0089540:CDS 50.0%
AGTGACTTACGCTTCCGCTA+GGG - chr1_2:71167886-71167905 Msa0089540:CDS 50.0%
CCACGTTAGCAATCTGGACT+TGG + chr1_2:71168093-71168112 None:intergenic 50.0%
CCAAGTCCAGATTGCTAACG+TGG - chr1_2:71168090-71168109 Msa0089540:intron 50.0%
TGCCATATCAGATTCAGGGG+AGG - chr1_2:71168129-71168148 Msa0089540:intron 50.0%
GACCTCCCCTGAATCTGATA+TGG + chr1_2:71168134-71168153 None:intergenic 50.0%
ATCAGATTCAGGGGAGGTCA+CGG - chr1_2:71168135-71168154 Msa0089540:intron 50.0%
TGGTGTCCCCCATCTTACAA+AGG - chr1_2:71168177-71168196 Msa0089540:intron 50.0%
GTCCCCCATCTTACAAAGGT+TGG - chr1_2:71168181-71168200 Msa0089540:intron 50.0%
TGCAGGCAAGTAGATCAACC+AGG - chr1_2:71168247-71168266 Msa0089540:intron 50.0%
CCCACCTTTCCAATCATACC+TGG + chr1_2:71168268-71168287 None:intergenic 50.0%
!! TGGAAAGGTGGGAAGCATCT+TGG - chr1_2:71168276-71168295 Msa0089540:intron 50.0%
!! GGAAAGGTGGGAAGCATCTT+GGG - chr1_2:71168277-71168296 Msa0089540:intron 50.0%
AAGCAGGCTGTGATGGCAAT+TGG - chr1_2:71168352-71168371 Msa0089540:intron 50.0%
ATATGTCTGGCTGATGTGCC+CGG - chr1_2:71168511-71168530 Msa0089540:CDS 50.0%
CCTACTCGCTTGTTCAACGA+TGG + chr1_2:71168547-71168566 None:intergenic 50.0%
CCATCGTTGAACAAGCGAGT+AGG - chr1_2:71168544-71168563 Msa0089540:CDS 50.0%
AGCGAGTAGGTGAGTTTAGG+GGG - chr1_2:71168557-71168576 Msa0089540:CDS 50.0%
!! ATGGTACTGGCACCAAGATG+AGG + chr1_2:71167106-71167125 None:intergenic 50.0%
!! TCATCTTGGTGCCAGTACCA+TGG - chr1_2:71167105-71167124 Msa0089540:three_prime_UTR 50.0%
TACCTGAGCTTCCATGGTAC+TGG + chr1_2:71167119-71167138 None:intergenic 50.0%
!! CTGTCGTTGGGGCTTTGAAA+GGG - chr1_2:71167257-71167276 Msa0089540:three_prime_UTR 50.0%
!! TGTCGTTGGGGCTTTGAAAG+GGG - chr1_2:71167258-71167277 Msa0089540:three_prime_UTR 50.0%
TGCACCAATGGTTTCCTCAG+AGG - chr1_2:71167303-71167322 Msa0089540:three_prime_UTR 50.0%
! AGCACCTCTGAGGAAACCAT+TGG + chr1_2:71167310-71167329 None:intergenic 50.0%
!! ATGGTTTCCTCAGAGGTGCT+AGG - chr1_2:71167310-71167329 Msa0089540:exon 50.0%
TGCTGAGAAACTGGGTAGGT+TGG - chr1_2:71167820-71167839 Msa0089540:CDS 50.0%
AAGTGACTTACGCTTCCGCT+AGG - chr1_2:71167885-71167904 Msa0089540:CDS 50.0%
AGTGACTTACGCTTCCGCTA+GGG - chr1_2:71167886-71167905 Msa0089540:CDS 50.0%
CCACGTTAGCAATCTGGACT+TGG + chr1_2:71168093-71168112 None:intergenic 50.0%
CCAAGTCCAGATTGCTAACG+TGG - chr1_2:71168090-71168109 Msa0089540:intron 50.0%
TGCCATATCAGATTCAGGGG+AGG - chr1_2:71168129-71168148 Msa0089540:intron 50.0%
GACCTCCCCTGAATCTGATA+TGG + chr1_2:71168134-71168153 None:intergenic 50.0%
ATCAGATTCAGGGGAGGTCA+CGG - chr1_2:71168135-71168154 Msa0089540:intron 50.0%
TGGTGTCCCCCATCTTACAA+AGG - chr1_2:71168177-71168196 Msa0089540:intron 50.0%
GTCCCCCATCTTACAAAGGT+TGG - chr1_2:71168181-71168200 Msa0089540:intron 50.0%
TGCAGGCAAGTAGATCAACC+AGG - chr1_2:71168247-71168266 Msa0089540:intron 50.0%
CCCACCTTTCCAATCATACC+TGG + chr1_2:71168268-71168287 None:intergenic 50.0%
!! TGGAAAGGTGGGAAGCATCT+TGG - chr1_2:71168276-71168295 Msa0089540:intron 50.0%
!! GGAAAGGTGGGAAGCATCTT+GGG - chr1_2:71168277-71168296 Msa0089540:intron 50.0%
AAGCAGGCTGTGATGGCAAT+TGG - chr1_2:71168352-71168371 Msa0089540:intron 50.0%
ATATGTCTGGCTGATGTGCC+CGG - chr1_2:71168511-71168530 Msa0089540:CDS 50.0%
CCTACTCGCTTGTTCAACGA+TGG + chr1_2:71168547-71168566 None:intergenic 50.0%
CCATCGTTGAACAAGCGAGT+AGG - chr1_2:71168544-71168563 Msa0089540:CDS 50.0%
AGCGAGTAGGTGAGTTTAGG+GGG - chr1_2:71168557-71168576 Msa0089540:CDS 50.0%
TGCCAGTACCATGGAAGCTC+AGG - chr1_2:71167114-71167133 Msa0089540:three_prime_UTR 55.0%
!! GCTGTCGTTGGGGCTTTGAA+AGG - chr1_2:71167256-71167275 Msa0089540:three_prime_UTR 55.0%
TTGGCTGTCCAACTGGTAGC+AGG - chr1_2:71167839-71167858 Msa0089540:CDS 55.0%
CAACTGGTAGCAGGAGGAAG+CGG - chr1_2:71167848-71167867 Msa0089540:CDS 55.0%
AAGATCATCAGGGGCCCTAG+CGG + chr1_2:71167903-71167922 None:intergenic 55.0%
AAGGATTGCTCCACGCAAGC+AGG - chr1_2:71168336-71168355 Msa0089540:intron 55.0%
GCGAGTAGGTGAGTTTAGGG+GGG - chr1_2:71168558-71168577 Msa0089540:CDS 55.0%
CGAGTAGGTGAGTTTAGGGG+GGG - chr1_2:71168559-71168578 Msa0089540:CDS 55.0%
TGCCAGTACCATGGAAGCTC+AGG - chr1_2:71167114-71167133 Msa0089540:three_prime_UTR 55.0%
!! GCTGTCGTTGGGGCTTTGAA+AGG - chr1_2:71167256-71167275 Msa0089540:three_prime_UTR 55.0%
TTGGCTGTCCAACTGGTAGC+AGG - chr1_2:71167839-71167858 Msa0089540:CDS 55.0%
CAACTGGTAGCAGGAGGAAG+CGG - chr1_2:71167848-71167867 Msa0089540:CDS 55.0%
AAGATCATCAGGGGCCCTAG+CGG + chr1_2:71167903-71167922 None:intergenic 55.0%
AAGGATTGCTCCACGCAAGC+AGG - chr1_2:71168336-71168355 Msa0089540:intron 55.0%
GCGAGTAGGTGAGTTTAGGG+GGG - chr1_2:71168558-71168577 Msa0089540:CDS 55.0%
CGAGTAGGTGAGTTTAGGGG+GGG - chr1_2:71168559-71168578 Msa0089540:CDS 55.0%
! GGGTAGGTTGGCTGTCCAAC+TGG - chr1_2:71167832-71167851 Msa0089540:CDS 60.0%
GCTGTCCAACTGGTAGCAGG+AGG - chr1_2:71167842-71167861 Msa0089540:CDS 60.0%
CGCTTCCTCCTGCTACCAGT+TGG + chr1_2:71167850-71167869 None:intergenic 60.0%
AGATTCAGGGGAGGTCACGG+TGG - chr1_2:71168138-71168157 Msa0089540:intron 60.0%
GTGGAGGGTCGTGTGAAGGA+TGG - chr1_2:71168157-71168176 Msa0089540:intron 60.0%
TCCACGCAAGCAGGCTGTGA+TGG - chr1_2:71168345-71168364 Msa0089540:intron 60.0%
! GGGTAGGTTGGCTGTCCAAC+TGG - chr1_2:71167832-71167851 Msa0089540:CDS 60.0%
GCTGTCCAACTGGTAGCAGG+AGG - chr1_2:71167842-71167861 Msa0089540:CDS 60.0%
CGCTTCCTCCTGCTACCAGT+TGG + chr1_2:71167850-71167869 None:intergenic 60.0%
AGATTCAGGGGAGGTCACGG+TGG - chr1_2:71168138-71168157 Msa0089540:intron 60.0%
GTGGAGGGTCGTGTGAAGGA+TGG - chr1_2:71168157-71168176 Msa0089540:intron 60.0%
TCCACGCAAGCAGGCTGTGA+TGG - chr1_2:71168345-71168364 Msa0089540:intron 60.0%
TTCAGGGGAGGTCACGGTGG+AGG - chr1_2:71168141-71168160 Msa0089540:intron 65.0%
TCAGGGGAGGTCACGGTGGA+GGG - chr1_2:71168142-71168161 Msa0089540:intron 65.0%
CACGGTGGAGGGTCGTGTGA+AGG - chr1_2:71168153-71168172 Msa0089540:intron 65.0%
GCCATCACAGCCTGCTTGCG+TGG + chr1_2:71168349-71168368 None:intergenic 65.0%
GGTGAGTTTAGGGGGGGACG+AGG - chr1_2:71168565-71168584 Msa0089540:CDS 65.0%
TTCAGGGGAGGTCACGGTGG+AGG - chr1_2:71168141-71168160 Msa0089540:intron 65.0%
TCAGGGGAGGTCACGGTGGA+GGG - chr1_2:71168142-71168161 Msa0089540:intron 65.0%
CACGGTGGAGGGTCGTGTGA+AGG - chr1_2:71168153-71168172 Msa0089540:intron 65.0%
GCCATCACAGCCTGCTTGCG+TGG + chr1_2:71168349-71168368 None:intergenic 65.0%
GGTGAGTTTAGGGGGGGACG+AGG - chr1_2:71168565-71168584 Msa0089540:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 71167079 71168707 71167079 ID=Msa0089540;Name=Msa0089540
chr1_2 mRNA 71167079 71168707 71167079 ID=Msa0089540-mRNA-1;Parent=Msa0089540;Name=Msa0089540-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0.5|0.33|1|0.5|0.66|3|248|284
chr1_2 exon 71167079 71167998 71167079 ID=Msa0089540-mRNA-1:exon:24487;Parent=Msa0089540-mRNA-1
chr1_2 exon 71168462 71168587 71168462 ID=Msa0089540-mRNA-1:exon:24486;Parent=Msa0089540-mRNA-1
chr1_2 exon 71168651 71168707 71168651 ID=Msa0089540-mRNA-1:exon:24485;Parent=Msa0089540-mRNA-1
chr1_2 CDS 71168651 71168707 71168651 ID=Msa0089540-mRNA-1:cds;Parent=Msa0089540-mRNA-1
chr1_2 CDS 71168462 71168587 71168462 ID=Msa0089540-mRNA-1:cds;Parent=Msa0089540-mRNA-1
chr1_2 CDS 71167327 71167998 71167327 ID=Msa0089540-mRNA-1:cds;Parent=Msa0089540-mRNA-1
chr1_2 three_prime_UTR 71167079 71167326 71167079 ID=Msa0089540-mRNA-1:three_prime_utr;Parent=Msa0089540-mRNA-1
Gene Sequence

>Msa0089540

ATGCATGAGCTAGTTACTGCAACACCTCATCTTGGTGCCAGTACCATGGAAGCTCAGTGTCTAATAACCTTTGAAAATGATGACCAGGAAGGTGTAGCTATTGAAATAGCAGAAGCTGTCGTTGGGGCTTTGAAAGGGGAGCTTGCTTCTACTGCAGTCAATGCACCAATGGTTTCCTCAGAGGTGTTAACAGAACTAAAACCATTTGTTGATCTTGCTGAGAAACTGGGTAGGTTGGCTGTCCAACTGGTAGCAGGAGGAAGCGGTGTAAAGACAGTGAAAGTGACTTACGCTTCCGCTAGGGCCCCTGATGATCTTGACACTCGTCTTCTTCGTGCTATGATAACAAAGGGTCTGATTGAGCCCATATCCAGTGTTTTCGTGAACTTAGTTAATGCTGACTTCACTGCTAAACAAAGAGGGCTAAGAATTACTGAGGAGAGAGTTATTCTTGATGGTTCACCTGAGAATCCACTTGAATTCATCCAAGTCCAGATTGCTAACGTGGAATCTCGATTTGCTAGTGCCATATCAGATTCAGGGGAGGTCACGGTGGAGGGTCGTGTGAAGGATGGTGTCCCCCATCTTACAAAGGTTGGATCTTTTGAAGTTGATGTGAGTTTGGAAGGTAGCATTATACTTTGCAGGCAAGTAGATCAACCAGGTATGATTGGAAAGGTGGGAAGCATCTTGGGTGAAGAGAATGTGAATGTCAGCTTCATGAGTGTTGGAAGGATTGCTCCACGCAAGCAGGCTGTGATGGCAATTGGAGTTGATGAGCAACCACGCAAAGAATCTTTGCAAAGGATTGGAGACATTCCTGCTGTTGAAGAATTTGTTTTCCTCAAGTTGTAA

Protein sequence

>Msa0089540

MHELVTATPHLGASTMEAQCLITFENDDQEGVAIEIAEAVVGALKGELASTAVNAPMVSSEVLTELKPFVDLAEKLGRLAVQLVAGGSGVKTVKVTYASARAPDDLDTRLLRAMITKGLIEPISSVFVNLVNADFTAKQRGLRITEERVILDGSPENPLEFIQVQIANVESRFASAISDSGEVTVEGRVKDGVPHLTKVGSFEVDVSLEGSIILCRQVDQPGMIGKVGSILGEENVNVSFMSVGRIAPRKQAVMAIGVDEQPRKESLQRIGDIPAVEEFVFLKL*