Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166670 | XP_013450311.1 | 92.754 | 207 | 3 | 2 | 1 | 196 | 1 | 206 | 8.17e-135 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166670 | sp|O65731|RS5_CICAR | 87.692 | 195 | 13 | 1 | 13 | 196 | 3 | 197 | 1.71e-121 | 344 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166670 | I3SKT5 | 92.754 | 207 | 3 | 2 | 1 | 196 | 1 | 206 | 3.90e-135 | 385 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa1166670 | 0.809578 | 1.765867e-50 | -8.615850e-47 |
| Msa0021290 | Msa1166670 | 0.813913 | 2.012201e-51 | -8.615850e-47 |
| Msa0021320 | Msa1166670 | 0.823492 | 1.345302e-53 | -8.615850e-47 |
| Msa0040220 | Msa1166670 | 0.824924 | 6.200182e-54 | -8.615850e-47 |
| Msa0045620 | Msa1166670 | 0.801748 | 7.776952e-49 | -8.615850e-47 |
| Msa0050530 | Msa1166670 | 0.823396 | 1.417123e-53 | -8.615850e-47 |
| Msa0087910 | Msa1166670 | 0.823550 | 1.303972e-53 | -8.615850e-47 |
| Msa0089540 | Msa1166670 | 0.846180 | 2.553641e-59 | -8.615850e-47 |
| Msa0094210 | Msa1166670 | 0.862855 | 3.769707e-64 | -8.615850e-47 |
| Msa0100600 | Msa1166670 | 0.844643 | 6.659028e-59 | -8.615850e-47 |
| Msa0100890 | Msa1166670 | 0.827083 | 1.902665e-54 | -8.615850e-47 |
| Msa0114600 | Msa1166670 | 0.850756 | 1.382529e-60 | -8.615850e-47 |
| Msa0602900 | Msa1166670 | 0.802128 | 6.498210e-49 | -8.615850e-47 |
| Msa0612040 | Msa1166670 | 0.820273 | 7.482300e-53 | -8.615850e-47 |
| Msa0618990 | Msa1166670 | 0.807493 | 4.919973e-50 | -8.615850e-47 |
| Msa0622230 | Msa1166670 | 0.842285 | 2.839759e-58 | -8.615850e-47 |
| Msa0643960 | Msa1166670 | 0.806779 | 6.968949e-50 | -8.615850e-47 |
| Msa0646560 | Msa1166670 | 0.803069 | 4.156790e-49 | -8.615850e-47 |
| Msa0652160 | Msa1166670 | 0.812814 | 3.507937e-51 | -8.615850e-47 |
| Msa0708630 | Msa1166670 | 0.828859 | 7.113430e-55 | -8.615850e-47 |
| Msa0748350 | Msa1166670 | 0.837408 | 5.291008e-57 | -8.615850e-47 |
| Msa0751720 | Msa1166670 | 0.819582 | 1.076589e-52 | -8.615850e-47 |
| Msa0767280 | Msa1166670 | 0.834069 | 3.708850e-56 | -8.615850e-47 |
| Msa0790450 | Msa1166670 | 0.807057 | 6.085655e-50 | -8.615850e-47 |
| Msa0831820 | Msa1166670 | 0.814588 | 1.427063e-51 | -8.615850e-47 |
| Msa0125590 | Msa1166670 | 0.807564 | 4.753293e-50 | -8.615850e-47 |
| Msa0132460 | Msa1166670 | 0.827385 | 1.610786e-54 | -8.615850e-47 |
| Msa0134580 | Msa1166670 | 0.848785 | 4.913385e-60 | -8.615850e-47 |
| Msa0168380 | Msa1166670 | 0.835807 | 1.353574e-56 | -8.615850e-47 |
| Msa0173250 | Msa1166670 | 0.811278 | 7.584083e-51 | -8.615850e-47 |
| Msa0182050 | Msa1166670 | 0.825619 | 4.245924e-54 | -8.615850e-47 |
| Msa0183840 | Msa1166670 | 0.803215 | 3.877328e-49 | -8.615850e-47 |
| Msa0192050 | Msa1166670 | 0.813206 | 2.878006e-51 | -8.615850e-47 |
| Msa0380590 | Msa1166670 | 0.812675 | 3.763298e-51 | -8.615850e-47 |
| Msa0388250 | Msa1166670 | 0.831840 | 1.328874e-55 | -8.615850e-47 |
| Msa0388520 | Msa1166670 | 0.828516 | 8.607984e-55 | -8.615850e-47 |
| Msa0416210 | Msa1166670 | 0.829336 | 5.448953e-55 | -8.615850e-47 |
| Msa0419710 | Msa1166670 | 0.815093 | 1.103063e-51 | -8.615850e-47 |
| Msa0426250 | Msa1166670 | 0.802466 | 5.537329e-49 | -8.615850e-47 |
| Msa0430130 | Msa1166670 | 0.808274 | 3.356589e-50 | -8.615850e-47 |
| Msa0433630 | Msa1166670 | 0.826899 | 2.105912e-54 | -8.615850e-47 |
| Msa0435280 | Msa1166670 | 0.820679 | 6.038086e-53 | -8.615850e-47 |
| Msa0450150 | Msa1166670 | 0.826847 | 2.166431e-54 | -8.615850e-47 |
| Msa0475810 | Msa1166670 | 0.803493 | 3.395293e-49 | -8.615850e-47 |
| Msa0477480 | Msa1166670 | 0.802963 | 4.371493e-49 | -8.615850e-47 |
| Msa1000780 | Msa1166670 | 0.809305 | 2.020636e-50 | -8.615850e-47 |
| Msa1001620 | Msa1166670 | 0.814104 | 1.825876e-51 | -8.615850e-47 |
| Msa1025200 | Msa1166670 | 0.856599 | 2.886006e-62 | -8.615850e-47 |
| Msa1025220 | Msa1166670 | 0.838077 | 3.561608e-57 | -8.615850e-47 |
| Msa1026710 | Msa1166670 | 0.811119 | 8.209562e-51 | -8.615850e-47 |
| Msa1050100 | Msa1166670 | 0.858288 | 9.132677e-63 | -8.615850e-47 |
| Msa1085850 | Msa1166670 | 0.804780 | 1.832513e-49 | -8.615850e-47 |
| Msa0277600 | Msa1166670 | 0.815325 | 9.797463e-52 | -8.615850e-47 |
| Msa0281330 | Msa1166670 | 0.815226 | 1.030263e-51 | -8.615850e-47 |
| Msa0281370 | Msa1166670 | 0.804158 | 2.470335e-49 | -8.615850e-47 |
| Msa0313060 | Msa1166670 | 0.805007 | 1.643117e-49 | -8.615850e-47 |
| Msa1144610 | Msa1166670 | 0.928453 | 2.827605e-92 | -8.615850e-47 |
| Msa1165640 | Msa1166670 | 0.837015 | 6.669005e-57 | -8.615850e-47 |
| Msa1166670 | Msa1220580 | 0.847690 | 9.858081e-60 | -8.615850e-47 |
| Msa1166670 | Msa1255850 | 0.802243 | 6.154432e-49 | -8.615850e-47 |
| Msa1166670 | Msa1308860 | 0.806079 | 9.792157e-50 | -8.615850e-47 |
| Msa1166670 | Msa1334560 | 0.846224 | 2.484028e-59 | -8.615850e-47 |
| Msa1166670 | Msa1351020 | 0.812196 | 4.787796e-51 | -8.615850e-47 |
| Msa1166670 | Msa1363910 | 0.893790 | 4.526623e-75 | -8.615850e-47 |
| Msa1166670 | Msa1367540 | 0.804488 | 2.108730e-49 | -8.615850e-47 |
| Msa1166670 | Msa1368170 | 0.802826 | 4.666496e-49 | -8.615850e-47 |
| Msa1166670 | Msa1376310 | 0.800012 | 1.759478e-48 | -8.615850e-47 |
| Msa1166670 | Msa1420830 | 0.838031 | 3.660196e-57 | -8.615850e-47 |
| Msa1166670 | Msa1424570 | 0.831393 | 1.712641e-55 | -8.615850e-47 |
| Msa1166670 | Msa1449160 | 0.940454 | 2.269774e-100 | -8.615850e-47 |
| Msa1166670 | Msa1450560 | 0.807275 | 5.472231e-50 | -8.615850e-47 |
| Msa0495620 | Msa1166670 | 0.800098 | 1.690345e-48 | -8.615850e-47 |
| Msa0500420 | Msa1166670 | 0.810347 | 1.205863e-50 | -8.615850e-47 |
| Msa0521510 | Msa1166670 | 0.831169 | 1.943793e-55 | -8.615850e-47 |
| Msa0521530 | Msa1166670 | 0.809305 | 2.020996e-50 | -8.615850e-47 |
| Msa0529900 | Msa1166670 | 0.806394 | 8.404422e-50 | -8.615850e-47 |
| Msa0547920 | Msa1166670 | 0.811948 | 5.422850e-51 | -8.615850e-47 |
| Msa0556620 | Msa1166670 | 0.824543 | 7.626379e-54 | -8.615850e-47 |
| Msa0572830 | Msa1166670 | 0.806267 | 8.938912e-50 | -8.615850e-47 |
| Msa0573550 | Msa1166670 | 0.853256 | 2.695460e-61 | -8.615850e-47 |
| Msa0582070 | Msa1166670 | 0.926739 | 3.099432e-91 | -8.615850e-47 |
| Msa0846900 | Msa1166670 | 0.850666 | 1.464975e-60 | -8.615850e-47 |
| Msa0925330 | Msa1166670 | 0.820693 | 5.993172e-53 | -8.615850e-47 |
| Msa0926310 | Msa1166670 | 0.809403 | 1.925554e-50 | -8.615850e-47 |
| Msa0929700 | Msa1166670 | 0.840580 | 7.980049e-58 | -8.615850e-47 |
| Msa0966120 | Msa1166670 | 0.817139 | 3.849370e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166670 | MtrunA17_Chr7g0268431 | 92.754 | 207 | 3 | 2 | 1 | 196 | 1 | 206 | 7.51e-139 | 385 |
| Msa1166670 | MtrunA17_Chr1g0176261 | 89.474 | 209 | 7 | 4 | 1 | 196 | 33 | 239 | 4.17e-129 | 362 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166670 | AT2G37270.1 | 83.085 | 201 | 22 | 2 | 8 | 196 | 7 | 207 | 2.95e-120 | 339 |
| Msa1166670 | AT2G37270.2 | 83.085 | 201 | 22 | 2 | 8 | 196 | 7 | 207 | 2.95e-120 | 339 |
| Msa1166670 | AT3G11940.1 | 83.770 | 191 | 20 | 1 | 17 | 196 | 17 | 207 | 1.82e-118 | 335 |
| Msa1166670 | AT3G11940.2 | 83.770 | 191 | 20 | 1 | 17 | 196 | 17 | 207 | 1.82e-118 | 335 |
Find 70 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATATAAATACAAATCT+AGG | 0.236520 | 7_4:-58729979 | None:intergenic |
| CAGCTATGCGATCAAGAAAA+AGG | 0.316264 | 7_4:-58726290 | Msa1166670:CDS |
| GCATCAACTATAACTTGAAT+TGG | 0.326315 | 7_4:+58729018 | None:intergenic |
| GAGCTTGACTTCGTTTAGAT+TGG | 0.348914 | 7_4:+58729745 | None:intergenic |
| ACCAGTTGTTAGAAGATATA+TGG | 0.352278 | 7_4:+58726503 | None:intergenic |
| AGAGAAGATGCAACCAGAAT+TGG | 0.353281 | 7_4:-58726587 | Msa1166670:CDS |
| AACACGTCAGCTTGGAAAAC+TGG | 0.359904 | 7_4:+58725978 | None:intergenic |
| GTGCCCGTGAAGCTGCATTT+AGG | 0.361118 | 7_4:-58726482 | Msa1166670:CDS |
| TTGGATCTGCTGGAGTTGTT+AGG | 0.369348 | 7_4:-58726568 | Msa1166670:CDS |
| AGGAACATATGTTGCATGTT+TGG | 0.372138 | 7_4:+58729212 | None:intergenic |
| GCCAATCGTTAAGCATCATT+TGG | 0.372423 | 7_4:-58726244 | Msa1166670:exon |
| GAGGAAAATAAACCAGTAAA+AGG | 0.394902 | 7_4:+58726135 | None:intergenic |
| ATGGAGCTTTGACGACGTTC+AGG | 0.402177 | 7_4:-58729714 | Msa1166670:intron |
| GCCATATATCTTCTAACAAC+TGG | 0.404354 | 7_4:-58726504 | Msa1166670:CDS |
| CGCGGCCGTCAGCTTCTCAC+TGG | 0.409187 | 7_4:+58729916 | None:intergenic |
| GGTACTCAAAGAAGCGCTTC+AGG | 0.411900 | 7_4:-58729176 | Msa1166670:CDS |
| AGCTTGACTTCGTTTAGATT+GGG | 0.412691 | 7_4:+58729746 | None:intergenic |
| CTTAGTCCATGACTGTTTCA+AGG | 0.413064 | 7_4:-58726076 | Msa1166670:three_prime_UTR |
| GAAAGAAACTCATGGCTGTT+AGG | 0.417495 | 7_4:-58729089 | Msa1166670:CDS |
| CAGATTACCGATCTGTCTCT+TGG | 0.434208 | 7_4:-58729258 | Msa1166670:CDS |
| AGATTACCGATCTGTCTCTT+GGG | 0.440013 | 7_4:-58729257 | Msa1166670:CDS |
| GCAACCAGAATTGGATCTGC+TGG | 0.442717 | 7_4:-58726578 | Msa1166670:CDS |
| GAAGGCAAAGCAAGAGTGAC+AGG | 0.449142 | 7_4:+58729950 | None:intergenic |
| TAGTTGATGCTGTCGTCAAC+AGG | 0.451278 | 7_4:-58729005 | Msa1166670:intron |
| TGCTGGAGTTGTTAGGAGGC+AGG | 0.469034 | 7_4:-58726561 | Msa1166670:CDS |
| TGATGCTTAACGATTGGCCT+TGG | 0.471931 | 7_4:+58726249 | None:intergenic |
| AGATTGGGATCAACTTCGAC+TGG | 0.475242 | 7_4:+58729761 | None:intergenic |
| CTGCCAAGGGTTCATCCAAC+AGG | 0.475684 | 7_4:-58726413 | Msa1166670:intron |
| ATTCTGGTTGCATCTTCTCT+AGG | 0.476377 | 7_4:+58726590 | None:intergenic |
| TCAATATAAATACAAATCTA+GGG | 0.483881 | 7_4:-58729978 | None:intergenic |
| TGTTCCTAAATGCAGCTTCA+CGG | 0.488373 | 7_4:+58726478 | None:intergenic |
| CTGTCTCTTGGGGATTACAT+TGG | 0.493111 | 7_4:-58729246 | Msa1166670:CDS |
| AACTCCAGCAGATCCAATTC+TGG | 0.495047 | 7_4:+58726574 | None:intergenic |
| TCCAAATGATGCTTAACGAT+TGG | 0.503018 | 7_4:+58726243 | None:intergenic |
| TAAGACAATTGCTGAATGCT+TGG | 0.507627 | 7_4:-58726454 | Msa1166670:CDS |
| TCAGCTTGGAAAACTGGTAT+TGG | 0.512119 | 7_4:+58725984 | None:intergenic |
| GTTCCTAAATGCAGCTTCAC+GGG | 0.512374 | 7_4:+58726479 | None:intergenic |
| ACATATGTTCCTCACACTGC+TGG | 0.521105 | 7_4:-58729201 | Msa1166670:CDS |
| GGGGATTACATTGGAGCAAG+AGG | 0.537561 | 7_4:-58729237 | Msa1166670:CDS |
| AATACTTCAACACGTCAGCT+TGG | 0.541551 | 7_4:+58725970 | None:intergenic |
| TTAGTGAGCCTCTCAACAAT+GGG | 0.543323 | 7_4:+58729141 | None:intergenic |
| TGAGATTGAGAGAGTTGCCA+AGG | 0.553654 | 7_4:-58726266 | Msa1166670:CDS |
| GAACGTCGTCAAAGCTCCAT+TGG | 0.555775 | 7_4:+58729717 | None:intergenic |
| ATACCTGTTGGATGAACCCT+TGG | 0.559348 | 7_4:+58726410 | None:intergenic |
| GATCTGCTGGAGTTGTTAGG+AGG | 0.561323 | 7_4:-58726565 | Msa1166670:CDS |
| TGAACTCATTAACGCTGCCA+AGG | 0.562075 | 7_4:-58726427 | Msa1166670:CDS |
| GTTAGTGAGCCTCTCAACAA+TGG | 0.562680 | 7_4:+58729140 | None:intergenic |
| AAGTCAAGCTCTTCAACCAA+TGG | 0.580728 | 7_4:-58729733 | Msa1166670:CDS |
| CGATGGTTGAAATGATATGC+TGG | 0.590544 | 7_4:-58725927 | Msa1166670:three_prime_UTR |
| CTCAGTGTCCCATTGTTGAG+AGG | 0.591866 | 7_4:-58729149 | Msa1166670:CDS |
| AATGATCCTTGAAACAGTCA+TGG | 0.599615 | 7_4:+58726070 | None:intergenic |
| ACAAGTCAATTCAACGTGAG+AGG | 0.604212 | 7_4:+58726116 | None:intergenic |
| TTAAATAAAGATGTAATACA+AGG | 0.605416 | 7_4:+58726185 | None:intergenic |
| GATTGGGATCAACTTCGACT+GGG | 0.607523 | 7_4:+58729762 | None:intergenic |
| GCCGCGCCGCACTATCTACA+AGG | 0.608102 | 7_4:-58729899 | Msa1166670:intron |
| GATTACCGATCTGTCTCTTG+GGG | 0.611070 | 7_4:-58729256 | Msa1166670:CDS |
| GTAATCCCCAAGAGACAGAT+CGG | 0.613626 | 7_4:+58729251 | None:intergenic |
| GAACTCATTAACGCTGCCAA+GGG | 0.615553 | 7_4:-58726426 | Msa1166670:CDS |
| ATGATGCACGGCAGAAACAA+CGG | 0.618587 | 7_4:-58729111 | Msa1166670:CDS |
| TAGGATCATTAAGCATGCCA+TGG | 0.620948 | 7_4:-58729070 | Msa1166670:CDS |
| AGCGACGGTTTCATCAGCCA+TGG | 0.634868 | 7_4:+58729787 | None:intergenic |
| TAGCAAGTGAATGATCTCCA+TGG | 0.641966 | 7_4:+58729053 | None:intergenic |
| AAACAACGGAAAGAAACTCA+TGG | 0.646751 | 7_4:-58729097 | Msa1166670:CDS |
| ATGTTCCTCACACTGCTGGT+AGG | 0.649707 | 7_4:-58729197 | Msa1166670:CDS |
| ACTAACTCTCTCATGATGCA+CGG | 0.651624 | 7_4:-58729123 | Msa1166670:CDS |
| AAGCTACCTTGTAGATAGTG+CGG | 0.671061 | 7_4:+58729893 | None:intergenic |
| AACTTCGACTGGGATAGCGA+CGG | 0.675722 | 7_4:+58729772 | None:intergenic |
| AAGGCAAAGCAAGAGTGACA+GGG | 0.684074 | 7_4:+58729951 | None:intergenic |
| GAGTACCTACCAGCAGTGTG+AGG | 0.691601 | 7_4:+58729192 | None:intergenic |
| ACCTTGTAGATAGTGCGGCG+CGG | 0.782232 | 7_4:+58729898 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTTGAATTATTATTAAT+TGG | - | chr7_4:58727582-58727601 | Msa1166670:intron | 10.0% |
| !!! | TTTCAATAAATATTTTATCT+TGG | - | chr7_4:58728169-58728188 | Msa1166670:intron | 10.0% |
| !!! | AATACTTTTTTGAATATTTA+AGG | - | chr7_4:58728916-58728935 | Msa1166670:intron | 10.0% |
| !!! | ATACTTTTTTGAATATTTAA+GGG | - | chr7_4:58728917-58728936 | Msa1166670:intron | 10.0% |
| !!! | AATTATATTATTTTATGTAG+TGG | - | chr7_4:58729279-58729298 | Msa1166670:intron | 10.0% |
| !!! | GCTATTTTCATAATTTATAT+TGG | - | chr7_4:58726408-58726427 | Msa1166670:intron | 15.0% |
| !!! | ATAAATCAACTTGAATTTTT+TGG | - | chr7_4:58727221-58727240 | Msa1166670:intron | 15.0% |
| !!! | TGTTTTTAAATTGTTAAAAC+TGG | - | chr7_4:58727616-58727635 | Msa1166670:intron | 15.0% |
| !!! | GTTTTTAAATTGTTAAAACT+GGG | - | chr7_4:58727617-58727636 | Msa1166670:intron | 15.0% |
| !! | AATTTATCTGTTTACATATA+GGG | + | chr7_4:58728348-58728367 | None:intergenic | 15.0% |
| !! | TAATTTATCTGTTTACATAT+AGG | + | chr7_4:58728349-58728368 | None:intergenic | 15.0% |
| !!! | AAACTTTAAAGATTGAATAA+TGG | + | chr7_4:58729513-58729532 | None:intergenic | 15.0% |
| !!! | TGATGAGAAATATTTTATTT+TGG | - | chr7_4:58729684-58729703 | Msa1166670:intron | 15.0% |
| !! | TTAAATAAAGATGTAATACA+AGG | + | chr7_4:58729711-58729730 | None:intergenic | 15.0% |
| !! | ACAAATTATGACATATTACT+GGG | + | chr7_4:58726477-58726496 | None:intergenic | 20.0% |
| !! | AACAAATTATGACATATTAC+TGG | + | chr7_4:58726478-58726497 | None:intergenic | 20.0% |
| !! | GTCAATATATATCAATCATA+GGG | + | chr7_4:58726944-58726963 | None:intergenic | 20.0% |
| !! | AGTCAATATATATCAATCAT+AGG | + | chr7_4:58726945-58726964 | None:intergenic | 20.0% |
| !! | AATAATATGAAACAGATCAA+TGG | + | chr7_4:58727022-58727041 | None:intergenic | 20.0% |
| !!! | TTGAAATTGAATTTTTGATG+CGG | - | chr7_4:58727041-58727060 | Msa1166670:intron | 20.0% |
| !!! | ATGATTATTTGTTTTCCTAT+TGG | - | chr7_4:58727101-58727120 | Msa1166670:intron | 20.0% |
| !!! | ATTTTAATAAAACAAAGTCC+AGG | + | chr7_4:58727447-58727466 | None:intergenic | 20.0% |
| !! | TCACTTATACATAACAAATA+AGG | + | chr7_4:58727749-58727768 | None:intergenic | 20.0% |
| !! | GTATAAGTGATCAAATATAT+AGG | - | chr7_4:58727759-58727778 | Msa1166670:intron | 20.0% |
| !! | ATTTATAGCATATAACTACA+TGG | + | chr7_4:58727807-58727826 | None:intergenic | 20.0% |
| !!! | ATGCTATAAATATTTTGTGA+TGG | - | chr7_4:58727816-58727835 | Msa1166670:intron | 20.0% |
| !!! | TGTTTTGTGATCAAATATAT+AGG | - | chr7_4:58727841-58727860 | Msa1166670:intron | 20.0% |
| !! | TTTATAGCATTATAACTACA+TGG | + | chr7_4:58727889-58727908 | None:intergenic | 20.0% |
| !!! | ATGCTATAAATATTTTGTGA+TGG | - | chr7_4:58727816-58727835 | Msa1166670:intron | 20.0% |
| !! | GATTACAATATGACAAAATA+AGG | + | chr7_4:58728133-58728152 | None:intergenic | 20.0% |
| !! | TGTCATATTGTAATCAAATT+TGG | - | chr7_4:58728138-58728157 | Msa1166670:intron | 20.0% |
| !! | GTCATATTGTAATCAAATTT+GGG | - | chr7_4:58728139-58728158 | Msa1166670:intron | 20.0% |
| !! | TCATATTGTAATCAAATTTG+GGG | - | chr7_4:58728140-58728159 | Msa1166670:intron | 20.0% |
| !! | GATTACAATATGACAAAATA+AGG | + | chr7_4:58728133-58728152 | None:intergenic | 20.0% |
| !! | ATGATTTATTATTTCCCTAT+TGG | - | chr7_4:58728331-58728350 | Msa1166670:intron | 20.0% |
| !! | TATTAACAATTAACTGTGTA+TGG | - | chr7_4:58729114-58729133 | Msa1166670:CDS | 20.0% |
| !!! | AACATTGTTGTTTTTAAACA+TGG | - | chr7_4:58729729-58729748 | Msa1166670:CDS | 20.0% |
| ! | TAATTCAATGATTAGGGTTA+GGG | + | chr7_4:58726077-58726096 | None:intergenic | 25.0% |
| ! | ATAATTCAATGATTAGGGTT+AGG | + | chr7_4:58726078-58726097 | None:intergenic | 25.0% |
| ! | CGTGAATAATTCAATGATTA+GGG | + | chr7_4:58726083-58726102 | None:intergenic | 25.0% |
| !!! | TATTTTCAAGTAACTCATGT+CGG | - | chr7_4:58726499-58726518 | Msa1166670:CDS | 25.0% |
| ! | TCAAATAAGCCAATCTAAAT+AGG | - | chr7_4:58726531-58726550 | Msa1166670:intron | 25.0% |
| ! | TACTAACACAAAAACCATTA+AGG | + | chr7_4:58726558-58726577 | None:intergenic | 25.0% |
| ! | GAAAAAAGTGACAAATGATA+AGG | + | chr7_4:58727179-58727198 | None:intergenic | 25.0% |
| !!! | TTAAGAATTTTGACAATGCA+TGG | - | chr7_4:58727260-58727279 | Msa1166670:intron | 25.0% |
| ! | TTGTTTATTCTCACTTTGTT+TGG | - | chr7_4:58727538-58727557 | Msa1166670:intron | 25.0% |
| ! | GATGATTTATTGTTTCCTAT+TGG | - | chr7_4:58727672-58727691 | Msa1166670:intron | 25.0% |
| ! | TGATTAATACTTGATAGAGA+AGG | - | chr7_4:58727944-58727963 | Msa1166670:intron | 25.0% |
| !!! | ACTATTTTAGCTGTTAAGAT+TGG | - | chr7_4:58728000-58728019 | Msa1166670:intron | 25.0% |
| !!! | CTATTTTAGCTGTTAAGATT+GGG | - | chr7_4:58728001-58728020 | Msa1166670:intron | 25.0% |
| !!! | TATTTTAGCTGTTAAGATTG+GGG | - | chr7_4:58728002-58728021 | Msa1166670:intron | 25.0% |
| !!! | GATGATTTTTTGTTTCCTAT+TGG | - | chr7_4:58728056-58728075 | Msa1166670:intron | 25.0% |
| ! | AGTAATCAATTAATCATGCA+TGG | - | chr7_4:58728193-58728212 | Msa1166670:intron | 25.0% |
| !! | GTAATTTTTACTTGTACGAA+AGG | - | chr7_4:58728238-58728257 | Msa1166670:intron | 25.0% |
| ! | TAAATCATCATTTCATTCTC+CGG | + | chr7_4:58727661-58727680 | None:intergenic | 25.0% |
| ! | ATTAAAGTAGTAAAGTGTGA+AGG | - | chr7_4:58728382-58728401 | Msa1166670:intron | 25.0% |
| !!! | AATTGTTTGTTTTTTTCCTC+TGG | - | chr7_4:58728713-58728732 | Msa1166670:intron | 25.0% |
| !!! | AAGTTTGAAATCTTTTCTTG+TGG | - | chr7_4:58728752-58728771 | Msa1166670:intron | 25.0% |
| ! | ATTGAAAGGAGAAAATGAAA+TGG | + | chr7_4:58729069-58729088 | None:intergenic | 25.0% |
| ! | CGAGAAACAAATTGTAAATA+AGG | - | chr7_4:58729160-58729179 | Msa1166670:CDS | 25.0% |
| ! | TTAATTCAAAGCAAAAACTG+AGG | - | chr7_4:58729200-58729219 | Msa1166670:CDS | 25.0% |
| ! | ACATATCCTAAAACTAAAAC+TGG | + | chr7_4:58729245-58729264 | None:intergenic | 25.0% |
| !! | CTTTAAAGATTGAATAATGG+TGG | + | chr7_4:58729510-58729529 | None:intergenic | 25.0% |
| ! | AGAAAACAAATTCAGTACAT+TGG | + | chr7_4:58729536-58729555 | None:intergenic | 25.0% |
| GCGTGAATAATTCAATGATT+AGG | + | chr7_4:58726084-58726103 | None:intergenic | 30.0% | |
| CATTAAGGACCTATTTAGAT+TGG | + | chr7_4:58726543-58726562 | None:intergenic | 30.0% | |
| CAATCTAAATAGGTCCTTAA+TGG | - | chr7_4:58726541-58726560 | Msa1166670:intron | 30.0% | |
| GCATCAACTATAACTTGAAT+TGG | + | chr7_4:58726878-58726897 | None:intergenic | 30.0% | |
| GGGAAAATAACAAAATGCAA+AGG | + | chr7_4:58726924-58726943 | None:intergenic | 30.0% | |
| CTGCTTAATATGTCTTGATT+TGG | - | chr7_4:58727067-58727086 | Msa1166670:intron | 30.0% | |
| ATTCAGGTATTCAAACCAAT+AGG | + | chr7_4:58727119-58727138 | None:intergenic | 30.0% | |
| TACAAAAAATGCCATCATTC+AGG | + | chr7_4:58727135-58727154 | None:intergenic | 30.0% | |
| TTGATTTACTGTTTCCCTAT+TGG | - | chr7_4:58727370-58727389 | Msa1166670:intron | 30.0% | |
| ACATGCATTATTACTGTTGA+GGG | + | chr7_4:58727474-58727493 | None:intergenic | 30.0% | |
| ATACAAAAACGTCATCATCT+AGG | + | chr7_4:58727706-58727725 | None:intergenic | 30.0% | |
| AATACTTGATAGAGAAGGAT+AGG | - | chr7_4:58727949-58727968 | Msa1166670:intron | 30.0% | |
| !!! | ATTTTAGCTGTTAAGATTGG+GGG | - | chr7_4:58728003-58728022 | Msa1166670:intron | 30.0% |
| !! | TTGTTTCCTATTGGTTTGAT+TGG | - | chr7_4:58727681-58727700 | Msa1166670:intron | 30.0% |
| ACAGCCATAGTTATCAATAT+TGG | - | chr7_4:58728557-58728576 | Msa1166670:intron | 30.0% | |
| CAGCCATAGTTATCAATATT+GGG | - | chr7_4:58728558-58728577 | Msa1166670:intron | 30.0% | |
| ! | CAACCCAATATTGATAACTA+TGG | + | chr7_4:58728564-58728583 | None:intergenic | 30.0% |
| TCAGATAGAGCTAATACAAA+AGG | + | chr7_4:58727149-58727168 | None:intergenic | 30.0% | |
| ATCTTGCATCATTACTACAA+GGG | + | chr7_4:58728687-58728706 | None:intergenic | 30.0% | |
| AATCTTGCATCATTACTACA+AGG | + | chr7_4:58728688-58728707 | None:intergenic | 30.0% | |
| TCCTAAAACTAAAACTGGTT+GGG | + | chr7_4:58729240-58729259 | None:intergenic | 30.0% | |
| ATCCTAAAACTAAAACTGGT+TGG | + | chr7_4:58729241-58729260 | None:intergenic | 30.0% | |
| ACCAGTTGTTAGAAGATATA+TGG | + | chr7_4:58729393-58729412 | None:intergenic | 30.0% | |
| !! | GTACTGAATTTGTTTTCTCA+TGG | - | chr7_4:58729538-58729557 | Msa1166670:intron | 30.0% |
| GAGGAAAATAAACCAGTAAA+AGG | + | chr7_4:58729761-58729780 | None:intergenic | 30.0% | |
| GAAATGTAAAAAATCACAGG+TGG | + | chr7_4:58729865-58729884 | None:intergenic | 30.0% | |
| GCAGAAATGTAAAAAATCAC+AGG | + | chr7_4:58729868-58729887 | None:intergenic | 30.0% | |
| !!! | TTGTTGATTTTCATAGTCGA+TGG | - | chr7_4:58729949-58729968 | Msa1166670:five_prime_UTR | 30.0% |
| !!! | TCACTGGTTTTTAGTTCTGA+AGG | + | chr7_4:58725964-58725983 | None:intergenic | 35.0% |
| AGCTTGACTTCGTTTAGATT+GGG | + | chr7_4:58726150-58726169 | None:intergenic | 35.0% | |
| !! | CAAACAGGGCTTATTTCTAT+AGG | + | chr7_4:58726307-58726326 | None:intergenic | 35.0% |
| CTATAGAAATAAGCCCTGTT+TGG | - | chr7_4:58726305-58726324 | Msa1166670:intron | 35.0% | |
| ACAAGTTGTTCATCCAAACA+GGG | + | chr7_4:58726321-58726340 | None:intergenic | 35.0% | |
| AACAAGTTGTTCATCCAAAC+AGG | + | chr7_4:58726322-58726341 | None:intergenic | 35.0% | |
| AGGAACATATGTTGCATGTT+TGG | + | chr7_4:58726684-58726703 | None:intergenic | 35.0% | |
| AAACAACGGAAAGAAACTCA+TGG | - | chr7_4:58726796-58726815 | Msa1166670:intron | 35.0% | |
| TGGTTTGAATACCTGAATGA+TGG | - | chr7_4:58727121-58727140 | Msa1166670:intron | 35.0% | |
| GTGACAAATGATAAGGAGAA+TGG | + | chr7_4:58727172-58727191 | None:intergenic | 35.0% | |
| ATACAAAAATGCCATCATGC+AGG | + | chr7_4:58727404-58727423 | None:intergenic | 35.0% | |
| CACATGCATTATTACTGTTG+AGG | + | chr7_4:58727475-58727494 | None:intergenic | 35.0% | |
| ATCTAGGCAATCAAACCAAT+AGG | + | chr7_4:58727690-58727709 | None:intergenic | 35.0% | |
| !! | TAGGTGGGTTGGTTATTAAT+TGG | - | chr7_4:58727968-58727987 | Msa1166670:intron | 35.0% |
| ATCTAGCCAATCAAACCAAT+AGG | + | chr7_4:58728074-58728093 | None:intergenic | 35.0% | |
| !!! | TACAACTAGCTTTTGATTGC+TGG | - | chr7_4:58728291-58728310 | Msa1166670:intron | 35.0% |
| AATTGTCACAGCTTAAGCTT+TGG | - | chr7_4:58728527-58728546 | Msa1166670:intron | 35.0% | |
| TCTTGCATCATTACTACAAG+GGG | + | chr7_4:58728686-58728705 | None:intergenic | 35.0% | |
| TAAGCAATAAACATCACCAG+AGG | + | chr7_4:58728732-58728751 | None:intergenic | 35.0% | |
| ! | GAAATCTTTTCTTGTGGTAG+AGG | - | chr7_4:58728758-58728777 | Msa1166670:intron | 35.0% |
| AATACAAAATGCCATCATCC+AGG | + | chr7_4:58728867-58728886 | None:intergenic | 35.0% | |
| AATCCTACCCAAATTACACA+CGG | + | chr7_4:58728977-58728996 | None:intergenic | 35.0% | |
| TCTCAGCACATAACATTGAA+AGG | + | chr7_4:58729083-58729102 | None:intergenic | 35.0% | |
| !!! | TCCCAACCAGTTTTAGTTTT+AGG | - | chr7_4:58729236-58729255 | Msa1166670:CDS | 35.0% |
| GCCATATATCTTCTAACAAC+TGG | - | chr7_4:58729389-58729408 | Msa1166670:intron | 35.0% | |
| TAAGACAATTGCTGAATGCT+TGG | - | chr7_4:58729439-58729458 | Msa1166670:intron | 35.0% | |
| AATAATGGTGGTATACCTGT+TGG | + | chr7_4:58729498-58729517 | None:intergenic | 35.0% | |
| ! | CTCATGGATTTTTCCTTGTT+TGG | - | chr7_4:58729554-58729573 | Msa1166670:intron | 35.0% |
| TGTTAGCAAAGAACCAAACA+AGG | + | chr7_4:58729570-58729589 | None:intergenic | 35.0% | |
| TCCAAATGATGCTTAACGAT+TGG | + | chr7_4:58729653-58729672 | None:intergenic | 35.0% | |
| ! | ACATGGTGTAAACCTTTTAC+TGG | - | chr7_4:58729746-58729765 | Msa1166670:CDS | 35.0% |
| AATGATCCTTGAAACAGTCA+TGG | + | chr7_4:58729826-58729845 | None:intergenic | 35.0% | |
| AAAAACCAGTGAGAAGCTGA+CGG | - | chr7_4:58725972-58725991 | Msa1166670:three_prime_UTR | 40.0% | |
| AAGCTACCTTGTAGATAGTG+CGG | + | chr7_4:58726003-58726022 | None:intergenic | 40.0% | |
| GTTAACGAGAGAGATGAAGA+AGG | + | chr7_4:58726051-58726070 | None:intergenic | 40.0% | |
| TTGAATTATTCACGCAGCCA+TGG | - | chr7_4:58726089-58726108 | Msa1166670:three_prime_UTR | 40.0% | |
| GAGCTTGACTTCGTTTAGAT+TGG | + | chr7_4:58726151-58726170 | None:intergenic | 40.0% | |
| AAGTCAAGCTCTTCAACCAA+TGG | - | chr7_4:58726160-58726179 | Msa1166670:three_prime_UTR | 40.0% | |
| AGATTACCGATCTGTCTCTT+GGG | - | chr7_4:58726636-58726655 | Msa1166670:intron | 40.0% | |
| TTAGTGAGCCTCTCAACAAT+GGG | + | chr7_4:58726755-58726774 | None:intergenic | 40.0% | |
| ACTAACTCTCTCATGATGCA+CGG | - | chr7_4:58726770-58726789 | Msa1166670:intron | 40.0% | |
| GAAAGAAACTCATGGCTGTT+AGG | - | chr7_4:58726804-58726823 | Msa1166670:intron | 40.0% | |
| TAGGATCATTAAGCATGCCA+TGG | - | chr7_4:58726823-58726842 | Msa1166670:intron | 40.0% | |
| TAGCAAGTGAATGATCTCCA+TGG | + | chr7_4:58726843-58726862 | None:intergenic | 40.0% | |
| ACCTACTTACTCATCCGAAT+CGG | - | chr7_4:58727335-58727354 | Msa1166670:intron | 40.0% | |
| ! | AACTTTTCATCCTCCCGATT+CGG | + | chr7_4:58727352-58727371 | None:intergenic | 40.0% |
| TGCAGGCAATCAAACCAATA+GGG | + | chr7_4:58727387-58727406 | None:intergenic | 40.0% | |
| ATGCAGGCAATCAAACCAAT+AGG | + | chr7_4:58727388-58727407 | None:intergenic | 40.0% | |
| ! | GAGCTGTTGATTGTTTGAAC+TGG | - | chr7_4:58727639-58727658 | Msa1166670:intron | 40.0% |
| ACTTGATAGAGAAGGATAGG+TGG | - | chr7_4:58727952-58727971 | Msa1166670:intron | 40.0% | |
| CTTGATAGAGAAGGATAGGT+GGG | - | chr7_4:58727953-58727972 | Msa1166670:intron | 40.0% | |
| ! | TGGTTTGATTGGCTAGATGA+TGG | - | chr7_4:58728076-58728095 | Msa1166670:intron | 40.0% |
| !! | TAGCTTTTGATTGCTGGAAC+CGG | - | chr7_4:58728297-58728316 | Msa1166670:intron | 40.0% |
| !! | TCAATATTGGGTTGATAGCC+AGG | - | chr7_4:58728570-58728589 | Msa1166670:intron | 40.0% |
| AATACAAAAGGCCATCATCC+TGG | + | chr7_4:58728591-58728610 | None:intergenic | 40.0% | |
| TCCAGGCAATCAAACCAATA+GGG | + | chr7_4:58728850-58728869 | None:intergenic | 40.0% | |
| ATCCAGGCAATCAAACCAAT+AGG | + | chr7_4:58728851-58728870 | None:intergenic | 40.0% | |
| ATTACACACGGCATCATCTA+GGG | + | chr7_4:58728965-58728984 | None:intergenic | 40.0% | |
| AATTACACACGGCATCATCT+AGG | + | chr7_4:58728966-58728985 | None:intergenic | 40.0% | |
| AGATGATGCCGTGTGTAATT+TGG | - | chr7_4:58728966-58728985 | Msa1166670:intron | 40.0% | |
| GATGATGCCGTGTGTAATTT+GGG | - | chr7_4:58728967-58728986 | Msa1166670:intron | 40.0% | |
| TCAAAGCAAAAACTGAGGCT+TGG | - | chr7_4:58729205-58729224 | Msa1166670:CDS | 40.0% | |
| ! | ATTCTGGTTGCATCTTCTCT+AGG | + | chr7_4:58729306-58729325 | None:intergenic | 40.0% |
| AGAGAAGATGCAACCAGAAT+TGG | - | chr7_4:58729306-58729325 | Msa1166670:intron | 40.0% | |
| TGTTCCTAAATGCAGCTTCA+CGG | + | chr7_4:58729418-58729437 | None:intergenic | 40.0% | |
| CAGCTATGCGATCAAGAAAA+AGG | - | chr7_4:58729603-58729622 | Msa1166670:intron | 40.0% | |
| GCCAATCGTTAAGCATCATT+TGG | - | chr7_4:58729649-58729668 | Msa1166670:intron | 40.0% | |
| ACAAGTCAATTCAACGTGAG+AGG | + | chr7_4:58729780-58729799 | None:intergenic | 40.0% | |
| CTTAGTCCATGACTGTTTCA+AGG | - | chr7_4:58729817-58729836 | Msa1166670:intron | 40.0% | |
| TCAGCTTGGAAAACTGGTAT+TGG | + | chr7_4:58729912-58729931 | None:intergenic | 40.0% | |
| AATACTTCAACACGTCAGCT+TGG | + | chr7_4:58729926-58729945 | None:intergenic | 40.0% | |
| AAGGCAAAGCAAGAGTGACA+GGG | + | chr7_4:58725945-58725964 | None:intergenic | 45.0% | |
| GATTGGGATCAACTTCGACT+GGG | + | chr7_4:58726134-58726153 | None:intergenic | 45.0% | |
| AGATTGGGATCAACTTCGAC+TGG | + | chr7_4:58726135-58726154 | None:intergenic | 45.0% | |
| CAAGAGACAGATCGGTAATC+TGG | + | chr7_4:58726637-58726656 | None:intergenic | 45.0% | |
| CAGATTACCGATCTGTCTCT+TGG | - | chr7_4:58726635-58726654 | Msa1166670:intron | 45.0% | |
| GATTACCGATCTGTCTCTTG+GGG | - | chr7_4:58726637-58726656 | Msa1166670:intron | 45.0% | |
| GTAATCCCCAAGAGACAGAT+CGG | + | chr7_4:58726645-58726664 | None:intergenic | 45.0% | |
| CTGTCTCTTGGGGATTACAT+TGG | - | chr7_4:58726647-58726666 | Msa1166670:intron | 45.0% | |
| ACATATGTTCCTCACACTGC+TGG | - | chr7_4:58726692-58726711 | Msa1166670:intron | 45.0% | |
| GTTAGTGAGCCTCTCAACAA+TGG | + | chr7_4:58726756-58726775 | None:intergenic | 45.0% | |
| ATGATGCACGGCAGAAACAA+CGG | - | chr7_4:58726782-58726801 | Msa1166670:intron | 45.0% | |
| ! | TAGTTGATGCTGTCGTCAAC+AGG | - | chr7_4:58726888-58726907 | Msa1166670:intron | 45.0% |
| CCTACTTACTCATCCGAATC+GGG | - | chr7_4:58727336-58727355 | Msa1166670:intron | 45.0% | |
| TGGTTTGATTGCCTGCATGA+TGG | - | chr7_4:58727390-58727409 | Msa1166670:intron | 45.0% | |
| GCTCTATCTGATCATTCTCC+TGG | - | chr7_4:58727426-58727445 | Msa1166670:intron | 45.0% | |
| ATAGAGAAGGATAGGTGGGT+TGG | - | chr7_4:58727957-58727976 | Msa1166670:intron | 45.0% | |
| TAAGATTGGGGGCTGTTGAT+TGG | - | chr7_4:58728014-58728033 | Msa1166670:intron | 45.0% | |
| !! | TCCCTATTGGTTTGATTGCC+TGG | - | chr7_4:58727383-58727402 | Msa1166670:intron | 45.0% |
| TGGTTTGATTGCCTGGATGA+TGG | - | chr7_4:58728853-58728872 | Msa1166670:intron | 45.0% | |
| ATGCCGTGTGTAATTTGGGT+AGG | - | chr7_4:58728971-58728990 | Msa1166670:intron | 45.0% | |
| AACTCCAGCAGATCCAATTC+TGG | + | chr7_4:58729322-58729341 | None:intergenic | 45.0% | |
| TTGGATCTGCTGGAGTTGTT+AGG | - | chr7_4:58729325-58729344 | Msa1166670:intron | 45.0% | |
| TGGATATCTCTCCTCTTCGT+CGG | - | chr7_4:58729358-58729377 | Msa1166670:intron | 45.0% | |
| GTTCCTAAATGCAGCTTCAC+GGG | + | chr7_4:58729417-58729436 | None:intergenic | 45.0% | |
| TGAACTCATTAACGCTGCCA+AGG | - | chr7_4:58729466-58729485 | Msa1166670:intron | 45.0% | |
| GAACTCATTAACGCTGCCAA+GGG | - | chr7_4:58729467-58729486 | Msa1166670:intron | 45.0% | |
| ATACCTGTTGGATGAACCCT+TGG | + | chr7_4:58729486-58729505 | None:intergenic | 45.0% | |
| TGAGATTGAGAGAGTTGCCA+AGG | - | chr7_4:58729627-58729646 | Msa1166670:intron | 45.0% | |
| !! | TGATGCTTAACGATTGGCCT+TGG | + | chr7_4:58729647-58729666 | None:intergenic | 45.0% |
| AACACGTCAGCTTGGAAAAC+TGG | + | chr7_4:58729918-58729937 | None:intergenic | 45.0% | |
| GAAGGCAAAGCAAGAGTGAC+AGG | + | chr7_4:58725946-58725965 | None:intergenic | 50.0% | |
| AACTTCGACTGGGATAGCGA+CGG | + | chr7_4:58726124-58726143 | None:intergenic | 50.0% | |
| GAACGTCGTCAAAGCTCCAT+TGG | + | chr7_4:58726179-58726198 | None:intergenic | 50.0% | |
| ! | ATGGAGCTTTGACGACGTTC+AGG | - | chr7_4:58726179-58726198 | Msa1166670:three_prime_UTR | 50.0% |
| GGGGATTACATTGGAGCAAG+AGG | - | chr7_4:58726656-58726675 | Msa1166670:intron | 50.0% | |
| ATGTTCCTCACACTGCTGGT+AGG | - | chr7_4:58726696-58726715 | Msa1166670:intron | 50.0% | |
| !! | GGTACTCAAAGAAGCGCTTC+AGG | - | chr7_4:58726717-58726736 | Msa1166670:intron | 50.0% |
| CTCAGTGTCCCATTGTTGAG+AGG | - | chr7_4:58726744-58726763 | Msa1166670:intron | 50.0% | |
| !! | CCCGATTCGGATGAGTAAGT+AGG | + | chr7_4:58727339-58727358 | None:intergenic | 50.0% |
| ACTTACTCATCCGAATCGGG+AGG | - | chr7_4:58727339-58727358 | Msa1166670:intron | 50.0% | |
| ! | ATTGGGGGCTGTTGATTGGT+TGG | - | chr7_4:58728018-58728037 | Msa1166670:intron | 50.0% |
| !! | TGGGTTGATAGCCAGGATGA+TGG | - | chr7_4:58728577-58728596 | Msa1166670:intron | 50.0% |
| GCAACCAGAATTGGATCTGC+TGG | - | chr7_4:58729315-58729334 | Msa1166670:intron | 50.0% | |
| GATCTGCTGGAGTTGTTAGG+AGG | - | chr7_4:58729328-58729347 | Msa1166670:intron | 50.0% | |
| ! | CTCCTCTTCGTCGGTTAATC+AGG | - | chr7_4:58729367-58729386 | Msa1166670:intron | 50.0% |
| ACCTTGTAGATAGTGCGGCG+CGG | + | chr7_4:58725998-58726017 | None:intergenic | 55.0% | |
| AGCGACGGTTTCATCAGCCA+TGG | + | chr7_4:58726109-58726128 | None:intergenic | 55.0% | |
| GAGTACCTACCAGCAGTGTG+AGG | + | chr7_4:58726704-58726723 | None:intergenic | 55.0% | |
| TGCTGGAGTTGTTAGGAGGC+AGG | - | chr7_4:58729332-58729351 | Msa1166670:intron | 55.0% | |
| AGTTGTTAGGAGGCAGGCTG+TGG | - | chr7_4:58729338-58729357 | Msa1166670:intron | 55.0% | |
| GGCCTGATTAACCGACGAAG+AGG | + | chr7_4:58729372-58729391 | None:intergenic | 55.0% | |
| GTGCCCGTGAAGCTGCATTT+AGG | - | chr7_4:58729411-58729430 | Msa1166670:intron | 55.0% | |
| CTGCCAAGGGTTCATCCAAC+AGG | - | chr7_4:58729480-58729499 | Msa1166670:intron | 55.0% | |
| GCCGCGCCGCACTATCTACA+AGG | - | chr7_4:58725994-58726013 | Msa1166670:three_prime_UTR | 65.0% | |
| CGCGGCCGTCAGCTTCTCAC+TGG | + | chr7_4:58725980-58725999 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 58725927 | 58729988 | 58725927 | ID=Msa1166670;Name=Msa1166670 |
| chr7_4 | mRNA | 58725927 | 58729988 | 58725927 | ID=Msa1166670-mRNA-1;Parent=Msa1166670;Name=Msa1166670-mRNA-1;_AED=0.14;_eAED=0.14;_QI=91|0.8|0.66|1|0.8|0.66|6|328|196 |
| chr7_4 | exon | 58725927 | 58726309 | 58725927 | ID=Msa1166670-mRNA-1:exon:18093;Parent=Msa1166670-mRNA-1 |
| chr7_4 | exon | 58726414 | 58726526 | 58726414 | ID=Msa1166670-mRNA-1:exon:18092;Parent=Msa1166670-mRNA-1 |
| chr7_4 | exon | 58726559 | 58726616 | 58726559 | ID=Msa1166670-mRNA-1:exon:18091;Parent=Msa1166670-mRNA-1 |
| chr7_4 | exon | 58729006 | 58729277 | 58729006 | ID=Msa1166670-mRNA-1:exon:18090;Parent=Msa1166670-mRNA-1 |
| chr7_4 | exon | 58729715 | 58729809 | 58729715 | ID=Msa1166670-mRNA-1:exon:18089;Parent=Msa1166670-mRNA-1 |
| chr7_4 | exon | 58729900 | 58729988 | 58729900 | ID=Msa1166670-mRNA-1:exon:18088;Parent=Msa1166670-mRNA-1 |
| chr7_4 | five_prime_UTR | 58729900 | 58729988 | 58729900 | ID=Msa1166670-mRNA-1:five_prime_utr;Parent=Msa1166670-mRNA-1 |
| chr7_4 | five_prime_UTR | 58729808 | 58729809 | 58729808 | ID=Msa1166670-mRNA-1:five_prime_utr;Parent=Msa1166670-mRNA-1 |
| chr7_4 | CDS | 58729715 | 58729807 | 58729715 | ID=Msa1166670-mRNA-1:cds;Parent=Msa1166670-mRNA-1 |
| chr7_4 | CDS | 58729006 | 58729277 | 58729006 | ID=Msa1166670-mRNA-1:cds;Parent=Msa1166670-mRNA-1 |
| chr7_4 | CDS | 58726559 | 58726616 | 58726559 | ID=Msa1166670-mRNA-1:cds;Parent=Msa1166670-mRNA-1 |
| chr7_4 | CDS | 58726414 | 58726526 | 58726414 | ID=Msa1166670-mRNA-1:cds;Parent=Msa1166670-mRNA-1 |
| chr7_4 | CDS | 58726255 | 58726309 | 58726255 | ID=Msa1166670-mRNA-1:cds;Parent=Msa1166670-mRNA-1 |
| chr7_4 | three_prime_UTR | 58725927 | 58726254 | 58725927 | ID=Msa1166670-mRNA-1:three_prime_utr;Parent=Msa1166670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
