Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643960 | XP_004487038.1 | 97.386 | 153 | 4 | 0 | 1 | 153 | 1 | 153 | 3.73e-100 | 294 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643960 | sp|Q9AT35|RL23A_DAUCA | 87.013 | 154 | 19 | 1 | 1 | 153 | 1 | 154 | 4.60e-82 | 241 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0643960 | 0.852603 | 4.141801e-61 | -8.615850e-47 |
| Msa0002430 | Msa0643960 | 0.811700 | 6.141003e-51 | -8.615850e-47 |
| Msa0003330 | Msa0643960 | 0.838551 | 2.688193e-57 | -8.615850e-47 |
| Msa0016340 | Msa0643960 | 0.811975 | 5.349582e-51 | -8.615850e-47 |
| Msa0027590 | Msa0643960 | 0.859992 | 2.816253e-63 | -8.615850e-47 |
| Msa0040220 | Msa0643960 | 0.861733 | 8.336719e-64 | -8.615850e-47 |
| Msa0042510 | Msa0643960 | 0.827896 | 1.214079e-54 | -8.615850e-47 |
| Msa0071640 | Msa0643960 | 0.800663 | 1.296626e-48 | -8.615850e-47 |
| Msa0071760 | Msa0643960 | 0.855831 | 4.843929e-62 | -8.615850e-47 |
| Msa0072570 | Msa0643960 | 0.820521 | 6.564399e-53 | -8.615850e-47 |
| Msa0075350 | Msa0643960 | 0.804569 | 2.028668e-49 | -8.615850e-47 |
| Msa0079560 | Msa0643960 | 0.838470 | 2.822205e-57 | -8.615850e-47 |
| Msa0086160 | Msa0643960 | 0.871234 | 7.979613e-67 | -8.615850e-47 |
| Msa0087910 | Msa0643960 | 0.889013 | 3.541221e-73 | -8.615850e-47 |
| Msa0089540 | Msa0643960 | 0.846534 | 2.044949e-59 | -8.615850e-47 |
| Msa0114600 | Msa0643960 | 0.892736 | 1.205762e-74 | -8.615850e-47 |
| Msa0116600 | Msa0643960 | 0.820652 | 6.125137e-53 | -8.615850e-47 |
| Msa0116690 | Msa0643960 | 0.818755 | 1.661086e-52 | -8.615850e-47 |
| Msa0602900 | Msa0643960 | 0.998496 | 8.308333e-267 | -8.615850e-47 |
| Msa0605600 | Msa0643960 | 0.816018 | 6.864085e-52 | -8.615850e-47 |
| Msa0605610 | Msa0643960 | 0.803317 | 3.693276e-49 | -8.615850e-47 |
| Msa0605890 | Msa0643960 | 0.912805 | 1.277696e-83 | -8.615850e-47 |
| Msa0609120 | Msa0643960 | 0.831209 | 1.900583e-55 | -8.615850e-47 |
| Msa0619230 | Msa0643960 | 0.905516 | 3.954771e-80 | -8.615850e-47 |
| Msa0621190 | Msa0643960 | 0.814920 | 1.204726e-51 | -8.615850e-47 |
| Msa0622230 | Msa0643960 | 0.831788 | 1.368440e-55 | -8.615850e-47 |
| Msa0643960 | Msa0646560 | 0.800440 | 1.439648e-48 | -8.615850e-47 |
| Msa0643960 | Msa0648670 | 0.800081 | 1.703352e-48 | -8.615850e-47 |
| Msa0643960 | Msa0649890 | 0.824784 | 6.689319e-54 | -8.615850e-47 |
| Msa0643960 | Msa0653060 | 0.826083 | 3.295679e-54 | -8.615850e-47 |
| Msa0643960 | Msa0656450 | 0.853786 | 1.898206e-61 | -8.615850e-47 |
| Msa0643960 | Msa0663400 | 0.850350 | 1.797338e-60 | -8.615850e-47 |
| Msa0643960 | Msa0686550 | 0.830643 | 2.615859e-55 | -8.615850e-47 |
| Msa0643960 | Msa0686660 | 0.817065 | 4.000136e-52 | -8.615850e-47 |
| Msa0643960 | Msa0691760 | 0.811149 | 8.086617e-51 | -8.615850e-47 |
| Msa0643960 | Msa0694400 | 0.911414 | 6.251351e-83 | -8.615850e-47 |
| Msa0643960 | Msa0704860 | 0.874824 | 4.993312e-68 | -8.615850e-47 |
| Msa0643960 | Msa0708630 | 0.904483 | 1.171177e-79 | -8.615850e-47 |
| Msa0643960 | Msa0715970 | 0.809973 | 1.451858e-50 | -8.615850e-47 |
| Msa0643960 | Msa0718560 | 0.803768 | 2.977927e-49 | -8.615850e-47 |
| Msa0643960 | Msa0741510 | 0.863904 | 1.783539e-64 | -8.615850e-47 |
| Msa0643960 | Msa0748350 | 0.856835 | 2.458910e-62 | -8.615850e-47 |
| Msa0643960 | Msa0749000 | 0.801822 | 7.510840e-49 | -8.615850e-47 |
| Msa0643960 | Msa0788380 | 0.805170 | 1.519412e-49 | -8.615850e-47 |
| Msa0643960 | Msa0790450 | 0.894745 | 1.847400e-75 | -8.615850e-47 |
| Msa0643960 | Msa0796490 | 0.826274 | 2.967588e-54 | -8.615850e-47 |
| Msa0643960 | Msa0798590 | 0.857297 | 1.796373e-62 | -8.615850e-47 |
| Msa0643960 | Msa0880050 | 0.808372 | 3.198543e-50 | -8.615850e-47 |
| Msa0643960 | Msa0902220 | 0.817913 | 2.577022e-52 | -8.615850e-47 |
| Msa0643960 | Msa0902730 | 0.815468 | 9.102863e-52 | -8.615850e-47 |
| Msa0643960 | Msa0927910 | 0.820151 | 7.981677e-53 | -8.615850e-47 |
| Msa0643960 | Msa0929680 | 0.843211 | 1.610792e-58 | -8.615850e-47 |
| Msa0643960 | Msa0929700 | 0.929948 | 3.335343e-93 | -8.615850e-47 |
| Msa0643960 | Msa0930100 | 0.850635 | 1.495147e-60 | -8.615850e-47 |
| Msa0643960 | Msa0930360 | 0.832083 | 1.157299e-55 | -8.615850e-47 |
| Msa0643960 | Msa0930790 | 0.838687 | 2.479301e-57 | -8.615850e-47 |
| Msa0643960 | Msa0930890 | 0.888828 | 4.176163e-73 | -8.615850e-47 |
| Msa0643960 | Msa1004780 | 0.834137 | 3.566160e-56 | -8.615850e-47 |
| Msa0643960 | Msa1019110 | 0.849922 | 2.369134e-60 | -8.615850e-47 |
| Msa0643960 | Msa1025200 | 0.839482 | 1.542953e-57 | -8.615850e-47 |
| Msa0643960 | Msa1025220 | 0.833446 | 5.307410e-56 | -8.615850e-47 |
| Msa0643960 | Msa1040160 | 0.825510 | 4.507508e-54 | -8.615850e-47 |
| Msa0643960 | Msa1047020 | 0.858880 | 6.077672e-63 | -8.615850e-47 |
| Msa0643960 | Msa1050100 | 0.847231 | 1.318295e-59 | -8.615850e-47 |
| Msa0643960 | Msa1054280 | 0.842244 | 2.910421e-58 | -8.615850e-47 |
| Msa0643960 | Msa1070810 | 0.817166 | 3.796886e-52 | -8.615850e-47 |
| Msa0643960 | Msa1079910 | 0.858883 | 6.067137e-63 | -8.615850e-47 |
| Msa0643960 | Msa1082050 | 0.819889 | 9.163070e-53 | -8.615850e-47 |
| Msa0643960 | Msa1083370 | 0.837664 | 4.549779e-57 | -8.615850e-47 |
| Msa0643960 | Msa1085850 | 0.882669 | 8.581201e-71 | -8.615850e-47 |
| Msa0643960 | Msa1093500 | 0.822975 | 1.776963e-53 | -8.615850e-47 |
| Msa0643960 | Msa1116940 | 0.855182 | 7.488368e-62 | -8.615850e-47 |
| Msa0643960 | Msa1118790 | 0.806520 | 7.905805e-50 | -8.615850e-47 |
| Msa0643960 | Msa1124850 | 0.814692 | 1.353355e-51 | -8.615850e-47 |
| Msa0643960 | Msa1124980 | 0.807482 | 4.947294e-50 | -8.615850e-47 |
| Msa0643960 | Msa1126690 | 0.891556 | 3.567353e-74 | -8.615850e-47 |
| Msa0643960 | Msa1130680 | 0.825163 | 5.443630e-54 | -8.615850e-47 |
| Msa0643960 | Msa1131030 | 0.823629 | 1.249398e-53 | -8.615850e-47 |
| Msa0643960 | Msa1136880 | 0.854450 | 1.221404e-61 | -8.615850e-47 |
| Msa0643960 | Msa1144610 | 0.812585 | 3.936669e-51 | -8.615850e-47 |
| Msa0643960 | Msa1158630 | 0.818315 | 2.090534e-52 | -8.615850e-47 |
| Msa0643960 | Msa1163320 | 0.814594 | 1.422863e-51 | -8.615850e-47 |
| Msa0643960 | Msa1164150 | 0.804911 | 1.720602e-49 | -8.615850e-47 |
| Msa0643960 | Msa1165210 | 0.822296 | 2.556119e-53 | -8.615850e-47 |
| Msa0643960 | Msa1165640 | 0.829616 | 4.660407e-55 | -8.615850e-47 |
| Msa0643960 | Msa1166670 | 0.806779 | 6.968949e-50 | -8.615850e-47 |
| Msa0643960 | Msa1167360 | 0.814196 | 1.742411e-51 | -8.615850e-47 |
| Msa0643960 | Msa1180000 | 0.869684 | 2.574678e-66 | -8.615850e-47 |
| Msa0643960 | Msa1186030 | 0.824210 | 9.131662e-54 | -8.615850e-47 |
| Msa0643960 | Msa1208330 | 0.804807 | 1.809351e-49 | -8.615850e-47 |
| Msa0643960 | Msa1213850 | 0.808045 | 3.755996e-50 | -8.615850e-47 |
| Msa0643960 | Msa1219760 | 0.859824 | 3.166307e-63 | -8.615850e-47 |
| Msa0643960 | Msa1235950 | 0.917357 | 5.859566e-86 | -8.615850e-47 |
| Msa0643960 | Msa1235980 | 0.918361 | 1.713958e-86 | -8.615850e-47 |
| Msa0643960 | Msa1237040 | 0.890318 | 1.098061e-73 | -8.615850e-47 |
| Msa0643960 | Msa1240270 | 0.810589 | 1.069253e-50 | -8.615850e-47 |
| Msa0643960 | Msa1245270 | 0.806663 | 7.372960e-50 | -8.615850e-47 |
| Msa0643960 | Msa1255830 | 0.846213 | 2.500674e-59 | -8.615850e-47 |
| Msa0643960 | Msa1255850 | 0.855629 | 5.547747e-62 | -8.615850e-47 |
| Msa0643960 | Msa1258540 | 0.830987 | 2.154403e-55 | -8.615850e-47 |
| Msa0643960 | Msa1269250 | -0.815442 | 9.227052e-52 | -8.615850e-47 |
| Msa0643960 | Msa1270640 | 0.855902 | 4.619355e-62 | -8.615850e-47 |
| Msa0643960 | Msa1270710 | 0.855962 | 4.435079e-62 | -8.615850e-47 |
| Msa0643960 | Msa1278130 | 0.847213 | 1.333337e-59 | -8.615850e-47 |
| Msa0643960 | Msa1284060 | 0.828359 | 9.395104e-55 | -8.615850e-47 |
| Msa0643960 | Msa1284800 | 0.807636 | 4.589367e-50 | -8.615850e-47 |
| Msa0643960 | Msa1296090 | 0.846236 | 2.465677e-59 | -8.615850e-47 |
| Msa0643960 | Msa1316100 | 0.887415 | 1.456505e-72 | -8.615850e-47 |
| Msa0643960 | Msa1317390 | 0.894798 | 1.757461e-75 | -8.615850e-47 |
| Msa0643960 | Msa1330730 | 0.842162 | 3.059346e-58 | -8.615850e-47 |
| Msa0643960 | Msa1333370 | 0.839684 | 1.367813e-57 | -8.615850e-47 |
| Msa0643960 | Msa1341780 | 0.890000 | 1.462162e-73 | -8.615850e-47 |
| Msa0643960 | Msa1344160 | 0.806425 | 8.276930e-50 | -8.615850e-47 |
| Msa0643960 | Msa1344190 | 0.802642 | 5.092655e-49 | -8.615850e-47 |
| Msa0643960 | Msa1347610 | 0.804107 | 2.532212e-49 | -8.615850e-47 |
| Msa0643960 | Msa1351020 | 0.905992 | 2.387476e-80 | -8.615850e-47 |
| Msa0643960 | Msa1351910 | 0.866894 | 2.041245e-65 | -8.615850e-47 |
| Msa0643960 | Msa1353300 | 0.819657 | 1.035118e-52 | -8.615850e-47 |
| Msa0643960 | Msa1358710 | 0.817273 | 3.592110e-52 | -8.615850e-47 |
| Msa0643960 | Msa1363910 | 0.826841 | 2.173949e-54 | -8.615850e-47 |
| Msa0643960 | Msa1367540 | 0.861359 | 1.084470e-63 | -8.615850e-47 |
| Msa0643960 | Msa1371410 | 0.852562 | 4.256411e-61 | -8.615850e-47 |
| Msa0643960 | Msa1385480 | 0.914517 | 1.747337e-84 | -8.615850e-47 |
| Msa0643960 | Msa1387750 | 0.811768 | 5.935291e-51 | -8.615850e-47 |
| Msa0643960 | Msa1390760 | 0.906573 | 1.283679e-80 | -8.615850e-47 |
| Msa0643960 | Msa1403520 | 0.845724 | 3.396954e-59 | -8.615850e-47 |
| Msa0643960 | Msa1407550 | 0.884740 | 1.481697e-71 | -8.615850e-47 |
| Msa0643960 | Msa1413570 | 0.858560 | 7.573624e-63 | -8.615850e-47 |
| Msa0643960 | Msa1415620 | 0.851132 | 1.082818e-60 | -8.615850e-47 |
| Msa0643960 | Msa1421510 | 0.845003 | 5.322905e-59 | -8.615850e-47 |
| Msa0643960 | Msa1423050 | 0.806841 | 6.762778e-50 | -8.615850e-47 |
| Msa0643960 | Msa1424570 | 0.883263 | 5.200307e-71 | -8.615850e-47 |
| Msa0643960 | Msa1425070 | 0.835412 | 1.703930e-56 | -8.615850e-47 |
| Msa0643960 | Msa1432310 | 0.876034 | 1.923803e-68 | -8.615850e-47 |
| Msa0643960 | Msa1441220 | -0.805857 | 1.090041e-49 | -8.615850e-47 |
| Msa0643960 | Msa1446410 | 0.832725 | 8.022888e-56 | -8.615850e-47 |
| Msa0643960 | Msa1446510 | 0.805639 | 1.211170e-49 | -8.615850e-47 |
| Msa0643960 | Msa1449160 | 0.816443 | 5.515851e-52 | -8.615850e-47 |
| Msa0643960 | Msa1450560 | 0.897160 | 1.839731e-76 | -8.615850e-47 |
| Msa0643960 | Msa1453530 | 0.817469 | 3.244280e-52 | -8.615850e-47 |
| Msa0643960 | Msa1462580 | 0.812764 | 3.597011e-51 | -8.615850e-47 |
| Msa0643960 | Msa1463570 | 0.870158 | 1.803128e-66 | -8.615850e-47 |
| Msa0643960 | Msa1465700 | 0.901322 | 3.013985e-78 | -8.615850e-47 |
| Msa0123290 | Msa0643960 | 0.868990 | 4.328397e-66 | -8.615850e-47 |
| Msa0127230 | Msa0643960 | 0.827861 | 1.238021e-54 | -8.615850e-47 |
| Msa0128330 | Msa0643960 | 0.877447 | 6.237428e-69 | -8.615850e-47 |
| Msa0132460 | Msa0643960 | 0.903806 | 2.368619e-79 | -8.615850e-47 |
| Msa0134580 | Msa0643960 | 0.892337 | 1.742808e-74 | -8.615850e-47 |
| Msa0144800 | Msa0643960 | 0.806942 | 6.437006e-50 | -8.615850e-47 |
| Msa0146610 | Msa0643960 | 0.817200 | 3.730620e-52 | -8.615850e-47 |
| Msa0167860 | Msa0643960 | 0.904077 | 1.787744e-79 | -8.615850e-47 |
| Msa0174580 | Msa0643960 | 0.867166 | 1.671514e-65 | -8.615850e-47 |
| Msa0182050 | Msa0643960 | 0.905131 | 5.931005e-80 | -8.615850e-47 |
| Msa0182100 | Msa0643960 | 0.905667 | 3.370280e-80 | -8.615850e-47 |
| Msa0183840 | Msa0643960 | 0.831396 | 1.708978e-55 | -8.615850e-47 |
| Msa0187810 | Msa0643960 | 0.840024 | 1.115457e-57 | -8.615850e-47 |
| Msa0188740 | Msa0643960 | 0.868333 | 7.061083e-66 | -8.615850e-47 |
| Msa0191450 | Msa0643960 | 0.832211 | 1.075664e-55 | -8.615850e-47 |
| Msa0191550 | Msa0643960 | 0.862896 | 3.663291e-64 | -8.615850e-47 |
| Msa0192300 | Msa0643960 | 0.875540 | 2.842170e-68 | -8.615850e-47 |
| Msa0194940 | Msa0643960 | 0.843023 | 1.808327e-58 | -8.615850e-47 |
| Msa0195030 | Msa0643960 | 0.816995 | 4.148772e-52 | -8.615850e-47 |
| Msa0219090 | Msa0643960 | 0.842956 | 1.883848e-58 | -8.615850e-47 |
| Msa0233550 | Msa0643960 | 0.817424 | 3.321469e-52 | -8.615850e-47 |
| Msa0235050 | Msa0643960 | 0.855006 | 8.424121e-62 | -8.615850e-47 |
| Msa0237180 | Msa0643960 | 0.824441 | 8.060537e-54 | -8.615850e-47 |
| Msa0369410 | Msa0643960 | 0.826721 | 2.321790e-54 | -8.615850e-47 |
| Msa0371490 | Msa0643960 | 0.870267 | 1.660144e-66 | -8.615850e-47 |
| Msa0376850 | Msa0643960 | 0.809525 | 1.812724e-50 | -8.615850e-47 |
| Msa0377370 | Msa0643960 | 0.880107 | 7.204670e-70 | -8.615850e-47 |
| Msa0377520 | Msa0643960 | 0.820793 | 5.684540e-53 | -8.615850e-47 |
| Msa0382670 | Msa0643960 | 0.817065 | 4.000136e-52 | -8.615850e-47 |
| Msa0382950 | Msa0643960 | 0.814190 | 1.747999e-51 | -8.615850e-47 |
| Msa0382960 | Msa0643960 | 0.812571 | 3.964226e-51 | -8.615850e-47 |
| Msa0387290 | Msa0643960 | 0.813438 | 2.559699e-51 | -8.615850e-47 |
| Msa0388520 | Msa0643960 | 0.811825 | 5.769077e-51 | -8.615850e-47 |
| Msa0416470 | Msa0643960 | 0.816728 | 4.762569e-52 | -8.615850e-47 |
| Msa0419710 | Msa0643960 | 0.810202 | 1.295800e-50 | -8.615850e-47 |
| Msa0426090 | Msa0643960 | 0.879275 | 1.423539e-69 | -8.615850e-47 |
| Msa0426250 | Msa0643960 | 0.891862 | 2.695882e-74 | -8.615850e-47 |
| Msa0426940 | Msa0643960 | 0.808486 | 3.025301e-50 | -8.615850e-47 |
| Msa0432750 | Msa0643960 | 0.846582 | 1.984344e-59 | -8.615850e-47 |
| Msa0433010 | Msa0643960 | 0.807262 | 5.509347e-50 | -8.615850e-47 |
| Msa0433060 | Msa0643960 | 0.858907 | 5.967955e-63 | -8.615850e-47 |
| Msa0450150 | Msa0643960 | 0.852912 | 3.381159e-61 | -8.615850e-47 |
| Msa0472480 | Msa0643960 | 0.873239 | 1.714656e-67 | -8.615850e-47 |
| Msa0475810 | Msa0643960 | 0.822221 | 2.659650e-53 | -8.615850e-47 |
| Msa0479980 | Msa0643960 | 0.849060 | 4.118992e-60 | -8.615850e-47 |
| Msa0481520 | Msa0643960 | 0.821896 | 3.163252e-53 | -8.615850e-47 |
| Msa0482560 | Msa0643960 | 0.806842 | 6.758634e-50 | -8.615850e-47 |
| Msa0239420 | Msa0643960 | 0.851860 | 6.738787e-61 | -8.615850e-47 |
| Msa0264640 | Msa0643960 | 0.812738 | 3.645754e-51 | -8.615850e-47 |
| Msa0270160 | Msa0643960 | 0.889883 | 1.624638e-73 | -8.615850e-47 |
| Msa0274940 | Msa0643960 | 0.825015 | 5.901984e-54 | -8.615850e-47 |
| Msa0277600 | Msa0643960 | 0.928423 | 2.951068e-92 | -8.615850e-47 |
| Msa0281330 | Msa0643960 | 0.876124 | 1.792193e-68 | -8.615850e-47 |
| Msa0281370 | Msa0643960 | 0.887422 | 1.446871e-72 | -8.615850e-47 |
| Msa0301250 | Msa0643960 | 0.877335 | 6.823812e-69 | -8.615850e-47 |
| Msa0313060 | Msa0643960 | 0.899526 | 1.817164e-77 | -8.615850e-47 |
| Msa0315430 | Msa0643960 | 0.888849 | 4.097329e-73 | -8.615850e-47 |
| Msa0315660 | Msa0643960 | 0.826657 | 2.405211e-54 | -8.615850e-47 |
| Msa0340560 | Msa0643960 | 0.852888 | 3.435660e-61 | -8.615850e-47 |
| Msa0346090 | Msa0643960 | 0.813805 | 2.125609e-51 | -8.615850e-47 |
| Msa0363320 | Msa0643960 | 0.826404 | 2.763832e-54 | -8.615850e-47 |
| Msa0485220 | Msa0643960 | 0.816928 | 4.294466e-52 | -8.615850e-47 |
| Msa0511760 | Msa0643960 | 0.860480 | 2.006083e-63 | -8.615850e-47 |
| Msa0516830 | Msa0643960 | 0.809945 | 1.471937e-50 | -8.615850e-47 |
| Msa0517480 | Msa0643960 | 0.827124 | 1.859892e-54 | -8.615850e-47 |
| Msa0521730 | Msa0643960 | 0.854603 | 1.102542e-61 | -8.615850e-47 |
| Msa0524680 | Msa0643960 | 0.857081 | 2.081407e-62 | -8.615850e-47 |
| Msa0529900 | Msa0643960 | 0.800094 | 1.693338e-48 | -8.615850e-47 |
| Msa0547920 | Msa0643960 | 0.996671 | 1.298340e-230 | -8.615850e-47 |
| Msa0550490 | Msa0643960 | 0.870364 | 1.542986e-66 | -8.615850e-47 |
| Msa0552510 | Msa0643960 | 0.832798 | 7.694714e-56 | -8.615850e-47 |
| Msa0568380 | Msa0643960 | 0.832016 | 1.202105e-55 | -8.615850e-47 |
| Msa0573550 | Msa0643960 | 0.916249 | 2.236171e-85 | -8.615850e-47 |
| Msa0574780 | Msa0643960 | 0.880689 | 4.462620e-70 | -8.615850e-47 |
| Msa0578010 | Msa0643960 | 0.846919 | 1.604515e-59 | -8.615850e-47 |
| Msa0579830 | Msa0643960 | 0.827952 | 1.177376e-54 | -8.615850e-47 |
| Msa0582070 | Msa0643960 | 0.814855 | 1.245691e-51 | -8.615850e-47 |
| Msa0585570 | Msa0643960 | 0.843772 | 1.140836e-58 | -8.615850e-47 |
| Msa0597240 | Msa0643960 | 0.887767 | 1.068076e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643960 | MtrunA17_Chr4g0030821 | 98.693 | 153 | 1 | 1 | 1 | 153 | 1 | 152 | 9.29e-104 | 293 |
| Msa0643960 | MtrunA17_Chr2g0327781 | 96.689 | 151 | 5 | 0 | 3 | 153 | 4 | 154 | 3.94e-101 | 286 |
| Msa0643960 | MtrunA17_Chr7g0222741 | 92.053 | 151 | 12 | 0 | 3 | 153 | 4 | 154 | 1.31e-67 | 202 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643960 | AT3G55280.1 | 87.662 | 154 | 18 | 1 | 1 | 153 | 1 | 154 | 2.39e-70 | 209 |
| Msa0643960 | AT3G55280.2 | 87.662 | 154 | 18 | 1 | 1 | 153 | 1 | 154 | 2.39e-70 | 209 |
| Msa0643960 | AT2G39460.1 | 89.844 | 128 | 13 | 0 | 26 | 153 | 27 | 154 | 1.24e-66 | 199 |
| Msa0643960 | AT2G39460.2 | 89.844 | 128 | 13 | 0 | 26 | 153 | 27 | 154 | 1.24e-66 | 199 |
| Msa0643960 | AT3G55280.3 | 92.373 | 118 | 9 | 0 | 36 | 153 | 31 | 148 | 2.64e-66 | 199 |
Find 70 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATCCCTTGTTTGTGTCTT+TGG | 0.162619 | 4_3:-47462174 | None:intergenic |
| GCTTTCAATGCCTGTGCCTT+TGG | 0.265621 | 4_3:-47462075 | None:intergenic |
| GGCACTGATGCGAGGATATT+TGG | 0.276630 | 4_3:-47462202 | None:intergenic |
| TATCCCTTGTTTGTGTCTTT+GGG | 0.296408 | 4_3:-47462173 | None:intergenic |
| CAACCTAACATAGGCCTTCT+TGG | 0.308307 | 4_3:-47462910 | None:intergenic |
| AAACGGGTTCTAGGGTTTAC+TGG | 0.315745 | 4_3:-47460787 | None:intergenic |
| GCACTGATGCGAGGATATTT+GGG | 0.324549 | 4_3:-47462201 | None:intergenic |
| CAGAGGAAGAAACGGGTTCT+AGG | 0.325173 | 4_3:-47460796 | None:intergenic |
| TAGTGGTCAAGCTTGTTTCT+TGG | 0.344862 | 4_3:-47462228 | None:intergenic |
| CGTAAATAAATACTAAGAAT+TGG | 0.348753 | 4_3:-47463198 | None:intergenic |
| GTTCTAGGGTTTACTGGTTT+CGG | 0.359030 | 4_3:-47460781 | None:intergenic |
| TTAGATGTTAGCCAGTTCTA+TGG | 0.385659 | 4_3:+47463013 | Msa0643960:three_prime_UTR |
| GTAGTCTAGTATATATGTTT+TGG | 0.388609 | 4_3:+47463313 | Msa0643960:three_prime_UTR |
| TAGTTATTGAAGGAAACTTT+TGG | 0.390719 | 4_3:+47463036 | Msa0643960:three_prime_UTR |
| TTCATTGACAAATCATGTAA+TGG | 0.410292 | 4_3:-47463269 | None:intergenic |
| GCACAAGTCAAGATTGTTCA+TGG | 0.413155 | 4_3:-47463420 | None:intergenic |
| TTCAATAACTACCATAGAAC+TGG | 0.419006 | 4_3:-47463024 | None:intergenic |
| TTGGATGTAGCAAACAAGAT+TGG | 0.425365 | 4_3:+47462951 | Msa0643960:CDS |
| ACATCCAATGCATCGTAATC+AGG | 0.425991 | 4_3:-47462936 | None:intergenic |
| CAATGCCTGTGCCTTTGGAT+CGG | 0.450132 | 4_3:-47462070 | None:intergenic |
| AGGTGTTAACCTTCTTCGCC+TGG | 0.454264 | 4_3:-47462386 | None:intergenic |
| AGTCAGTACCTGGATTTACC+TGG | 0.469690 | 4_3:+47462983 | Msa0643960:exon |
| TGGATGTAGCAAACAAGATT+GGG | 0.476041 | 4_3:+47462952 | Msa0643960:CDS |
| GCTGCCAAGGCAGTCAAGTC+AGG | 0.480557 | 4_3:+47462096 | Msa0643960:CDS |
| GTCAAGCTTGTTTCTTGGTG+TGG | 0.490928 | 4_3:-47462223 | None:intergenic |
| GTACCAAGAAGGCCTATGTT+AGG | 0.503933 | 4_3:+47462907 | Msa0643960:CDS |
| CATAAATGCTCACCTGATCA+AGG | 0.508831 | 4_3:-47462406 | None:intergenic |
| GGAACTTCAAAATCTGATAG+TGG | 0.511992 | 4_3:-47462245 | None:intergenic |
| TTGTTTGTGTCTTTGGGCGA+TGG | 0.513342 | 4_3:-47462167 | None:intergenic |
| AGTTCTATGGTAGTTATTGA+AGG | 0.514582 | 4_3:+47463026 | Msa0643960:three_prime_UTR |
| AATTGAGGATAACAACACTT+TGG | 0.518687 | 4_3:+47462296 | Msa0643960:CDS |
| ATAGGCCTTCTTGGTACCAT+CGG | 0.519310 | 4_3:-47462901 | None:intergenic |
| TTCCTCTGCATCCACCGCGA+AGG | 0.519918 | 4_3:+47460811 | Msa0643960:five_prime_UTR |
| AGAGGAAGAAACGGGTTCTA+GGG | 0.523704 | 4_3:-47460795 | None:intergenic |
| GAAGAAAATGTATGACATCC+AGG | 0.526017 | 4_3:+47462368 | Msa0643960:CDS |
| AGAAGGTTAACACCTTGATC+AGG | 0.531796 | 4_3:+47462394 | Msa0643960:CDS |
| GACACCTGATTACGATGCAT+TGG | 0.535533 | 4_3:+47462932 | Msa0643960:CDS |
| GTGGATGCAGAGGAAGAAAC+GGG | 0.538720 | 4_3:-47460803 | None:intergenic |
| AGTGCCTGACTTGACTGCCT+TGG | 0.543420 | 4_3:-47462100 | None:intergenic |
| TAGGCCTTCTTGGTACCATC+GGG | 0.543529 | 4_3:-47462900 | None:intergenic |
| CAAAGACACAAACAAGGGAT+AGG | 0.544147 | 4_3:+47462175 | Msa0643960:CDS |
| AATAGAACCCAGGTAAATCC+AGG | 0.548065 | 4_3:-47462991 | None:intergenic |
| GGTGGATGCAGAGGAAGAAA+CGG | 0.553400 | 4_3:-47460804 | None:intergenic |
| AGGCACTGCTATTAAGAAGA+AGG | 0.555789 | 4_3:+47462116 | Msa0643960:CDS |
| GTATGACATCCAGGCGAAGA+AGG | 0.560881 | 4_3:+47462377 | Msa0643960:CDS |
| GGATCATCTAAGTCAGTACC+TGG | 0.562175 | 4_3:+47462973 | Msa0643960:exon |
| TTAATCTGTTGCAGGCCCGA+TGG | 0.562967 | 4_3:+47462885 | Msa0643960:intron |
| ACAGGCATTGAAAGCTGCCA+AGG | 0.571400 | 4_3:+47462083 | Msa0643960:CDS |
| GAAGACCGATCCAAAGGCAC+AGG | 0.572296 | 4_3:+47462065 | Msa0643960:CDS |
| GTCAGTACCTGGATTTACCT+GGG | 0.574096 | 4_3:+47462984 | Msa0643960:three_prime_UTR |
| GTCCGCAATGAAGAAAATTG+AGG | 0.580232 | 4_3:+47462281 | Msa0643960:CDS |
| GCACTGTGCACAAACCTTCG+CGG | 0.588728 | 4_3:-47460825 | None:intergenic |
| CAGGCCCGATGGTACCAAGA+AGG | 0.589470 | 4_3:+47462896 | Msa0643960:intron |
| AACCTTCGCGGTGGATGCAG+AGG | 0.590066 | 4_3:-47460813 | None:intergenic |
| TTGCGGACTCAGTGGTGAGT+GGG | 0.598322 | 4_3:-47462266 | None:intergenic |
| TTCTAAGAAGACCGATCCAA+AGG | 0.610830 | 4_3:+47462059 | Msa0643960:CDS |
| ATTGCGGACTCAGTGGTGAG+TGG | 0.611075 | 4_3:-47462267 | None:intergenic |
| TTTCTTCATTGCGGACTCAG+TGG | 0.615852 | 4_3:-47462274 | None:intergenic |
| CACTGATGCGAGGATATTTG+GGG | 0.617729 | 4_3:-47462200 | None:intergenic |
| CTTGGTGTGGCACTGATGCG+AGG | 0.626082 | 4_3:-47462210 | None:intergenic |
| TTAGCTTGACGAGGCAACTG+AGG | 0.633424 | 4_3:+47463235 | Msa0643960:three_prime_UTR |
| CATAGAATGTTAGCTTGACG+AGG | 0.635703 | 4_3:+47463226 | Msa0643960:three_prime_UTR |
| ATCAGGTGTCAACCTAACAT+AGG | 0.641379 | 4_3:-47462919 | None:intergenic |
| CTGTGCACAAACCTTCGCGG+TGG | 0.647730 | 4_3:-47460822 | None:intergenic |
| ATCGCCCAAAGACACAAACA+AGG | 0.648974 | 4_3:+47462169 | Msa0643960:CDS |
| CAAGTCAAGATTGTTCATGG+TGG | 0.660293 | 4_3:-47463417 | None:intergenic |
| CTAACATCTAAATAGAACCC+AGG | 0.693241 | 4_3:-47463001 | None:intergenic |
| TGAGTCAAAATTGAAACACA+AGG | 0.718288 | 4_3:-47463131 | None:intergenic |
| TCGCCCAAAGACACAAACAA+GGG | 0.727590 | 4_3:+47462170 | Msa0643960:CDS |
| GAGACATCAAATTTACCACA+AGG | 0.729584 | 4_3:-47463336 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATTTTTTTCATGAATT+AGG | + | chr4_3:47460913-47460932 | Msa0643960:intron | 10.0% |
| !!! | TATATTTTTTTCATGAATTA+GGG | + | chr4_3:47460914-47460933 | Msa0643960:intron | 10.0% |
| !!! | TTTTTACTAACAAAAATGAA+TGG | - | chr4_3:47461057-47461076 | None:intergenic | 15.0% |
| !!! | TATTTTAATCAAATAATGCA+TGG | + | chr4_3:47461938-47461957 | Msa0643960:intron | 15.0% |
| !! | AATCAAATCATACATGAAAA+TGG | - | chr4_3:47461173-47461192 | None:intergenic | 20.0% |
| !!! | TCATGTATGATTTGATTTTA+AGG | + | chr4_3:47461176-47461195 | Msa0643960:intron | 20.0% |
| !!! | CTTAATTTTATAAGTTCTTC+AGG | - | chr4_3:47461381-47461400 | None:intergenic | 20.0% |
| !! | CTGAAGAACTTATAAAATTA+AGG | + | chr4_3:47461379-47461398 | Msa0643960:intron | 20.0% |
| !!! | CTTACATAAGCTATTTTTAT+AGG | + | chr4_3:47461529-47461548 | Msa0643960:intron | 20.0% |
| !! | AGCTTATGATATAACATTAA+GGG | - | chr4_3:47461827-47461846 | None:intergenic | 20.0% |
| !! | TACTAAGAATTGGAAAAATA+AGG | - | chr4_3:47463191-47463210 | None:intergenic | 20.0% |
| !! | CGTAAATAAATACTAAGAAT+TGG | - | chr4_3:47463201-47463220 | None:intergenic | 20.0% |
| ! | TGAAGAAATGAATGAAACAA+AGG | - | chr4_3:47460873-47460892 | None:intergenic | 25.0% |
| ! | AGAAAATTGAAGTTACCTTT+AGG | - | chr4_3:47460983-47461002 | None:intergenic | 25.0% |
| ! | ATTAAGGTGAAATTAGTGTA+TGG | + | chr4_3:47461395-47461414 | Msa0643960:intron | 25.0% |
| ! | GATTTACAAATTTGAGCTTA+TGG | - | chr4_3:47461439-47461458 | None:intergenic | 25.0% |
| ! | CAGCTTATGATATAACATTA+AGG | - | chr4_3:47461828-47461847 | None:intergenic | 25.0% |
| !! | GATTAATACTGATTATCCAT+AGG | + | chr4_3:47461902-47461921 | Msa0643960:intron | 25.0% |
| ! | ATCAAATAATGCATGGAATT+AGG | + | chr4_3:47461945-47461964 | Msa0643960:intron | 25.0% |
| ! | TGCTGATAAGAAAAAGATTA+AGG | + | chr4_3:47462338-47462357 | Msa0643960:CDS | 25.0% |
| ! | TACAAATTATCTCAAATGTC+AGG | - | chr4_3:47462540-47462559 | None:intergenic | 25.0% |
| !! | TTCTAGTTGAATATGTGTTT+AGG | + | chr4_3:47462670-47462689 | Msa0643960:intron | 25.0% |
| !! | TTCTAGTTGAATATGTGTTT+AGG | + | chr4_3:47462670-47462689 | Msa0643960:intron | 25.0% |
| ! | TTAATTATTATAGTTCAGCG+TGG | + | chr4_3:47462832-47462851 | Msa0643960:intron | 25.0% |
| !! | TAGTTATTGAAGGAAACTTT+TGG | + | chr4_3:47463036-47463055 | Msa0643960:three_prime_UTR | 25.0% |
| ! | TTCATTGACAAATCATGTAA+TGG | - | chr4_3:47463272-47463291 | None:intergenic | 25.0% |
| !! | GTAGTCTAGTATATATGTTT+TGG | + | chr4_3:47463313-47463332 | Msa0643960:three_prime_UTR | 25.0% |
| AATGAAACAAAGGAATTACG+AGG | - | chr4_3:47460863-47460882 | None:intergenic | 30.0% | |
| ! | CATGAATTAGGGTTTTTATC+AGG | + | chr4_3:47460925-47460944 | Msa0643960:intron | 30.0% |
| ! | TCTTTTCCATCTGCAAAAAA+TGG | + | chr4_3:47460955-47460974 | Msa0643960:exon | 30.0% |
| !!! | TTTTTTGCTCATCATAACTC+AGG | - | chr4_3:47461229-47461248 | None:intergenic | 30.0% |
| GAGTTATGATGAGCAAAAAA+AGG | + | chr4_3:47461229-47461248 | Msa0643960:intron | 30.0% | |
| ATGATGAGCAAAAAAAGGTT+AGG | + | chr4_3:47461234-47461253 | Msa0643960:intron | 30.0% | |
| AATAAGTTGCTTAACCAAAC+AGG | - | chr4_3:47461479-47461498 | None:intergenic | 30.0% | |
| ! | ATCCTCAATTTTCTTCATTG+CGG | - | chr4_3:47462286-47462305 | None:intergenic | 30.0% |
| AATTGAGGATAACAACACTT+TGG | + | chr4_3:47462296-47462315 | Msa0643960:CDS | 30.0% | |
| ATTTATGCAGTTACTGTTCA+AGG | + | chr4_3:47462422-47462441 | Msa0643960:intron | 30.0% | |
| ATGTCTGCAAAATATACTAC+TGG | - | chr4_3:47462565-47462584 | None:intergenic | 30.0% | |
| ! | TTCTAGTTGAATACGTGTTT+AGG | + | chr4_3:47462620-47462639 | Msa0643960:intron | 30.0% |
| TTAGGCATTAATACCAACAA+TGG | + | chr4_3:47462638-47462657 | Msa0643960:intron | 30.0% | |
| AGAAAACAGAAAACCATTGT+TGG | - | chr4_3:47462654-47462673 | None:intergenic | 30.0% | |
| TTAGGCATTAATACCAACAA+TGG | + | chr4_3:47462638-47462657 | Msa0643960:intron | 30.0% | |
| ! | GAATCTGGAATTAATGATCA+GGG | + | chr4_3:47462780-47462799 | Msa0643960:intron | 30.0% |
| TTCAATAACTACCATAGAAC+TGG | - | chr4_3:47463027-47463046 | None:intergenic | 30.0% | |
| AGTTCTATGGTAGTTATTGA+AGG | + | chr4_3:47463026-47463045 | Msa0643960:three_prime_UTR | 30.0% | |
| !! | TTGAAGGAAACTTTTGGAAA+AGG | + | chr4_3:47463042-47463061 | Msa0643960:three_prime_UTR | 30.0% |
| !! | TGAAGGAAACTTTTGGAAAA+GGG | + | chr4_3:47463043-47463062 | Msa0643960:three_prime_UTR | 30.0% |
| TGAGTCAAAATTGAAACACA+AGG | - | chr4_3:47463134-47463153 | None:intergenic | 30.0% | |
| AGCACATAAGCTTAAATCAG+TGG | - | chr4_3:47461020-47461039 | None:intergenic | 35.0% | |
| CTTAACCAAACAGGATGTAA+GGG | - | chr4_3:47461470-47461489 | None:intergenic | 35.0% | |
| TACGTTGTGTGAGATTGTTT+GGG | - | chr4_3:47461766-47461785 | None:intergenic | 35.0% | |
| ATACGTTGTGTGAGATTGTT+TGG | - | chr4_3:47461767-47461786 | None:intergenic | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | + | chr4_3:47461801-47461820 | Msa0643960:intron | 35.0% | |
| TATAACATTAAGGGCCTGTT+TGG | - | chr4_3:47461818-47461837 | None:intergenic | 35.0% | |
| ! | TACTGATTATCCATAGGCTT+TGG | + | chr4_3:47461908-47461927 | Msa0643960:intron | 35.0% |
| ATATACTGAACCAAAGCCTA+TGG | - | chr4_3:47461921-47461940 | None:intergenic | 35.0% | |
| ! | TATCCCTTGTTTGTGTCTTT+GGG | - | chr4_3:47462176-47462195 | None:intergenic | 35.0% |
| GGAACTTCAAAATCTGATAG+TGG | - | chr4_3:47462248-47462267 | None:intergenic | 35.0% | |
| GAAGAAAATGTATGACATCC+AGG | + | chr4_3:47462368-47462387 | Msa0643960:CDS | 35.0% | |
| !! | AGACATACCGAACCATTTTT+GGG | + | chr4_3:47462579-47462598 | Msa0643960:intron | 35.0% |
| CTAGAAAACAGAACCATTGT+TGG | - | chr4_3:47462704-47462723 | None:intergenic | 35.0% | |
| ! | GGAATCTGGAATTAATGATC+AGG | + | chr4_3:47462779-47462798 | Msa0643960:intron | 35.0% |
| ! | TCGACTTTTTAATCTGTTGC+AGG | + | chr4_3:47462877-47462896 | Msa0643960:intron | 35.0% |
| TTGGATGTAGCAAACAAGAT+TGG | + | chr4_3:47462951-47462970 | Msa0643960:CDS | 35.0% | |
| TGGATGTAGCAAACAAGATT+GGG | + | chr4_3:47462952-47462971 | Msa0643960:CDS | 35.0% | |
| CTAACATCTAAATAGAACCC+AGG | - | chr4_3:47463004-47463023 | None:intergenic | 35.0% | |
| TTAGATGTTAGCCAGTTCTA+TGG | + | chr4_3:47463013-47463032 | Msa0643960:three_prime_UTR | 35.0% | |
| !!! | GTATATATGTTTTGGCCTTG+TGG | + | chr4_3:47463321-47463340 | Msa0643960:three_prime_UTR | 35.0% |
| GAGACATCAAATTTACCACA+AGG | - | chr4_3:47463339-47463358 | None:intergenic | 35.0% | |
| AATTACGAGGAGAGTAGAAG+AGG | - | chr4_3:47460850-47460869 | None:intergenic | 40.0% | |
| !!! | TAGGAGCCATTTTTTGCAGA+TGG | - | chr4_3:47460964-47460983 | None:intergenic | 40.0% |
| CTGCAAAAAATGGCTCCTAA+AGG | + | chr4_3:47460965-47460984 | Msa0643960:exon | 40.0% | |
| GAGTTTGTAAGCGACTGTTT+AGG | + | chr4_3:47461198-47461217 | Msa0643960:intron | 40.0% | |
| ! | ACAGGATGTAAGGGTAGTTT+TGG | - | chr4_3:47461461-47461480 | None:intergenic | 40.0% |
| AACTACCCTTACATCCTGTT+TGG | + | chr4_3:47461462-47461481 | Msa0643960:intron | 40.0% | |
| GCTTAACCAAACAGGATGTA+AGG | - | chr4_3:47461471-47461490 | None:intergenic | 40.0% | |
| !! | CTTATGCAATGTTTTTGCGC+AGG | + | chr4_3:47462030-47462049 | Msa0643960:intron | 40.0% |
| ! | TTCTAAGAAGACCGATCCAA+AGG | + | chr4_3:47462059-47462078 | Msa0643960:CDS | 40.0% |
| ! | AGGCACTGCTATTAAGAAGA+AGG | + | chr4_3:47462116-47462135 | Msa0643960:CDS | 40.0% |
| ! | CTATCCCTTGTTTGTGTCTT+TGG | - | chr4_3:47462177-47462196 | None:intergenic | 40.0% |
| CAAAGACACAAACAAGGGAT+AGG | + | chr4_3:47462175-47462194 | Msa0643960:CDS | 40.0% | |
| ! | TAGTGGTCAAGCTTGTTTCT+TGG | - | chr4_3:47462231-47462250 | None:intergenic | 40.0% |
| GTCCGCAATGAAGAAAATTG+AGG | + | chr4_3:47462281-47462300 | Msa0643960:CDS | 40.0% | |
| AGAAGGTTAACACCTTGATC+AGG | + | chr4_3:47462394-47462413 | Msa0643960:CDS | 40.0% | |
| CATAAATGCTCACCTGATCA+AGG | - | chr4_3:47462409-47462428 | None:intergenic | 40.0% | |
| !! | TACCCTTCGCATGTTTTGTT+AGG | + | chr4_3:47462508-47462527 | Msa0643960:intron | 40.0% |
| !! | ACCCTTCGCATGTTTTGTTA+GGG | + | chr4_3:47462509-47462528 | Msa0643960:intron | 40.0% |
| ACCCTAACAAAACATGCGAA+GGG | - | chr4_3:47462513-47462532 | None:intergenic | 40.0% | |
| ! | CAGACATACCGAACCATTTT+TGG | + | chr4_3:47462578-47462597 | Msa0643960:intron | 40.0% |
| !!! | ACCGAACCATTTTTGGGTTT+TGG | + | chr4_3:47462585-47462604 | Msa0643960:intron | 40.0% |
| GCCAAAACCCAAAAATGGTT+CGG | - | chr4_3:47462589-47462608 | None:intergenic | 40.0% | |
| !!! | GAACCATTTTTGGGTTTTGG+CGG | + | chr4_3:47462588-47462607 | Msa0643960:intron | 40.0% |
| AAACCGCCAAAACCCAAAAA+TGG | - | chr4_3:47462594-47462613 | None:intergenic | 40.0% | |
| ATAGCATTGCACTGAACTGT+TGG | - | chr4_3:47462752-47462771 | None:intergenic | 40.0% | |
| AGTTCAGTGCAATGCTATCA+GGG | + | chr4_3:47462754-47462773 | Msa0643960:intron | 40.0% | |
| ATCAGGTGTCAACCTAACAT+AGG | - | chr4_3:47462922-47462941 | None:intergenic | 40.0% | |
| ACATCCAATGCATCGTAATC+AGG | - | chr4_3:47462939-47462958 | None:intergenic | 40.0% | |
| AATAGAACCCAGGTAAATCC+AGG | - | chr4_3:47462994-47463013 | None:intergenic | 40.0% | |
| ! | CATAGAATGTTAGCTTGACG+AGG | + | chr4_3:47463226-47463245 | Msa0643960:three_prime_UTR | 40.0% |
| CAAGTCAAGATTGTTCATGG+TGG | - | chr4_3:47463420-47463439 | None:intergenic | 40.0% | |
| GCACAAGTCAAGATTGTTCA+TGG | - | chr4_3:47463423-47463442 | None:intergenic | 40.0% | |
| !! | AAACGGGTTCTAGGGTTTAC+TGG | - | chr4_3:47460790-47460809 | None:intergenic | 45.0% |
| ! | AGAGGAAGAAACGGGTTCTA+GGG | - | chr4_3:47460798-47460817 | None:intergenic | 45.0% |
| CATTAAGGGCCTGTTTGGAT+TGG | - | chr4_3:47461813-47461832 | None:intergenic | 45.0% | |
| TTGTTTGTGTCTTTGGGCGA+TGG | - | chr4_3:47462170-47462189 | None:intergenic | 45.0% | |
| ATCGCCCAAAGACACAAACA+AGG | + | chr4_3:47462169-47462188 | Msa0643960:CDS | 45.0% | |
| TCGCCCAAAGACACAAACAA+GGG | + | chr4_3:47462170-47462189 | Msa0643960:CDS | 45.0% | |
| CACTGATGCGAGGATATTTG+GGG | - | chr4_3:47462203-47462222 | None:intergenic | 45.0% | |
| ! | GCACTGATGCGAGGATATTT+GGG | - | chr4_3:47462204-47462223 | None:intergenic | 45.0% |
| ! | GTCAAGCTTGTTTCTTGGTG+TGG | - | chr4_3:47462226-47462245 | None:intergenic | 45.0% |
| TTTCTTCATTGCGGACTCAG+TGG | - | chr4_3:47462277-47462296 | None:intergenic | 45.0% | |
| CACCCTAACAAAACATGCGA+AGG | - | chr4_3:47462514-47462533 | None:intergenic | 45.0% | |
| !! | CTTCGCATGTTTTGTTAGGG+TGG | + | chr4_3:47462512-47462531 | Msa0643960:intron | 45.0% |
| CAGTTCAGTGCAATGCTATC+AGG | + | chr4_3:47462753-47462772 | Msa0643960:intron | 45.0% | |
| ATGCTATCAGGGTTGGAATC+TGG | + | chr4_3:47462765-47462784 | Msa0643960:intron | 45.0% | |
| ATAGGCCTTCTTGGTACCAT+CGG | - | chr4_3:47462904-47462923 | None:intergenic | 45.0% | |
| GTACCAAGAAGGCCTATGTT+AGG | + | chr4_3:47462907-47462926 | Msa0643960:CDS | 45.0% | |
| CAACCTAACATAGGCCTTCT+TGG | - | chr4_3:47462913-47462932 | None:intergenic | 45.0% | |
| GACACCTGATTACGATGCAT+TGG | + | chr4_3:47462932-47462951 | Msa0643960:CDS | 45.0% | |
| GGATCATCTAAGTCAGTACC+TGG | + | chr4_3:47462973-47462992 | Msa0643960:exon | 45.0% | |
| AGTCAGTACCTGGATTTACC+TGG | + | chr4_3:47462983-47463002 | Msa0643960:exon | 45.0% | |
| GTCAGTACCTGGATTTACCT+GGG | + | chr4_3:47462984-47463003 | Msa0643960:three_prime_UTR | 45.0% | |
| ! | CAGAGGAAGAAACGGGTTCT+AGG | - | chr4_3:47460799-47460818 | None:intergenic | 50.0% |
| GTGGATGCAGAGGAAGAAAC+GGG | - | chr4_3:47460806-47460825 | None:intergenic | 50.0% | |
| GGTGGATGCAGAGGAAGAAA+CGG | - | chr4_3:47460807-47460826 | None:intergenic | 50.0% | |
| CAATGCCTGTGCCTTTGGAT+CGG | - | chr4_3:47462073-47462092 | None:intergenic | 50.0% | |
| GCTTTCAATGCCTGTGCCTT+TGG | - | chr4_3:47462078-47462097 | None:intergenic | 50.0% | |
| !! | ACAGGCATTGAAAGCTGCCA+AGG | + | chr4_3:47462083-47462102 | Msa0643960:CDS | 50.0% |
| !! | GGCACTGATGCGAGGATATT+TGG | - | chr4_3:47462205-47462224 | None:intergenic | 50.0% |
| GTATGACATCCAGGCGAAGA+AGG | + | chr4_3:47462377-47462396 | Msa0643960:CDS | 50.0% | |
| AGGTGTTAACCTTCTTCGCC+TGG | - | chr4_3:47462389-47462408 | None:intergenic | 50.0% | |
| CAGTGCAATGCTATCAGGGT+TGG | + | chr4_3:47462758-47462777 | Msa0643960:intron | 50.0% | |
| TTAATCTGTTGCAGGCCCGA+TGG | + | chr4_3:47462885-47462904 | Msa0643960:intron | 50.0% | |
| TAGGCCTTCTTGGTACCATC+GGG | - | chr4_3:47462903-47462922 | None:intergenic | 50.0% | |
| ! | TTAGCTTGACGAGGCAACTG+AGG | + | chr4_3:47463235-47463254 | Msa0643960:three_prime_UTR | 50.0% |
| GCACTGTGCACAAACCTTCG+CGG | - | chr4_3:47460828-47460847 | None:intergenic | 55.0% | |
| ! | GAAGACCGATCCAAAGGCAC+AGG | + | chr4_3:47462065-47462084 | Msa0643960:CDS | 55.0% |
| ! | AGTGCCTGACTTGACTGCCT+TGG | - | chr4_3:47462103-47462122 | None:intergenic | 55.0% |
| TTGCGGACTCAGTGGTGAGT+GGG | - | chr4_3:47462269-47462288 | None:intergenic | 55.0% | |
| ATTGCGGACTCAGTGGTGAG+TGG | - | chr4_3:47462270-47462289 | None:intergenic | 55.0% | |
| TTCCTCTGCATCCACCGCGA+AGG | + | chr4_3:47460811-47460830 | Msa0643960:five_prime_UTR | 60.0% | |
| AACCTTCGCGGTGGATGCAG+AGG | - | chr4_3:47460816-47460835 | None:intergenic | 60.0% | |
| CTGTGCACAAACCTTCGCGG+TGG | - | chr4_3:47460825-47460844 | None:intergenic | 60.0% | |
| GCTGCCAAGGCAGTCAAGTC+AGG | + | chr4_3:47462096-47462115 | Msa0643960:CDS | 60.0% | |
| !! | CTTGGTGTGGCACTGATGCG+AGG | - | chr4_3:47462213-47462232 | None:intergenic | 60.0% |
| CAGGCCCGATGGTACCAAGA+AGG | + | chr4_3:47462896-47462915 | Msa0643960:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 47460784 | 47463450 | 47460784 | ID=Msa0643960;Name=Msa0643960 |
| chr4_3 | mRNA | 47460784 | 47463450 | 47460784 | ID=Msa0643960-mRNA-1;Parent=Msa0643960;Name=Msa0643960-mRNA-1;_AED=0.02;_eAED=0.02;_QI=88|1|1|1|0.66|0.5|4|467|153 |
| chr4_3 | exon | 47460784 | 47460832 | 47460784 | ID=Msa0643960-mRNA-1:exon:11212;Parent=Msa0643960-mRNA-1 |
| chr4_3 | exon | 47460935 | 47460986 | 47460935 | ID=Msa0643960-mRNA-1:exon:11213;Parent=Msa0643960-mRNA-1 |
| chr4_3 | exon | 47462052 | 47462415 | 47462052 | ID=Msa0643960-mRNA-1:exon:11214;Parent=Msa0643960-mRNA-1 |
| chr4_3 | exon | 47462899 | 47463450 | 47462899 | ID=Msa0643960-mRNA-1:exon:11215;Parent=Msa0643960-mRNA-1 |
| chr4_3 | five_prime_UTR | 47460784 | 47460832 | 47460784 | ID=Msa0643960-mRNA-1:five_prime_utr;Parent=Msa0643960-mRNA-1 |
| chr4_3 | five_prime_UTR | 47460935 | 47460973 | 47460935 | ID=Msa0643960-mRNA-1:five_prime_utr;Parent=Msa0643960-mRNA-1 |
| chr4_3 | CDS | 47460974 | 47460986 | 47460974 | ID=Msa0643960-mRNA-1:cds;Parent=Msa0643960-mRNA-1 |
| chr4_3 | CDS | 47462052 | 47462415 | 47462052 | ID=Msa0643960-mRNA-1:cds;Parent=Msa0643960-mRNA-1 |
| chr4_3 | CDS | 47462899 | 47462983 | 47462899 | ID=Msa0643960-mRNA-1:cds;Parent=Msa0643960-mRNA-1 |
| chr4_3 | three_prime_UTR | 47462984 | 47463450 | 47462984 | ID=Msa0643960-mRNA-1:three_prime_utr;Parent=Msa0643960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
