AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0550100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0550100 MtrunA17_Chr4g0034971 96.516 488 2 1 1 473 73 560 0.0 977
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0550100 AT4G39280.1 78.689 488 85 4 1 472 1 485 0.0 805
Msa0550100 AT4G39280.2 78.689 488 85 4 1 472 1 485 0.0 804
Msa0550100 AT3G58140.1 24.348 230 113 7 234 450 131 312 3.82e-11 65.5

Find 133 sgRNAs with CRISPR-Local

Find 688 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTGAATTTCAACTAATTT+TGG 0.096630 4_1:+45506131 Msa0550100:CDS
GCCAAAATTAGTTGAAATTC+AGG 0.195550 4_1:-45506132 None:intergenic
TCTATTGTGCGGCGGTTCTT+AGG 0.224374 4_1:+45505792 Msa0550100:five_prime_UTR
CCCATCGGCCGCAACATTTC+AGG 0.247616 4_1:-45514034 None:intergenic
CCAAATGTATTGCTTGATAT+TGG 0.248698 4_1:-45514612 None:intergenic
CACAGGCTGCTAAGAATAAA+TGG 0.253144 4_1:+45507045 Msa0550100:CDS
TTATATCACCACTGTTATAA+AGG 0.264608 4_1:-45514815 None:intergenic
GGGATTGTTCAATAGGTAAA+AGG 0.264711 4_1:-45514794 None:intergenic
GAAGGGTTACTCGGTGAAAA+AGG 0.272456 4_1:+45508431 Msa0550100:CDS
TAAGAATAAATGGGTGGAAA+TGG 0.321478 4_1:+45507055 Msa0550100:CDS
TTATAAAGGGATTGTTCAAT+AGG 0.338680 4_1:-45514801 None:intergenic
GGCAGTTTCTTTGTTGTTGA+AGG 0.347853 4_1:-45512484 None:intergenic
ATCCCATACATTATCATTGT+TGG 0.352476 4_1:-45514290 None:intergenic
GCAATAACTTGGACATCTTC+AGG 0.352913 4_1:-45514061 None:intergenic
ACACAACTGCTGTTTCTTCC+CGG 0.353252 4_1:+45512736 Msa0550100:CDS
AACAAATATATCAGACATAA+TGG 0.358053 4_1:-45514568 None:intergenic
GGAAACACTTATGCTACTTT+GGG 0.368488 4_1:+45506105 Msa0550100:CDS
AGGAAACACTTATGCTACTT+TGG 0.372317 4_1:+45506104 Msa0550100:CDS
TGACTCTATCTTCCACATCT+TGG 0.374666 4_1:-45507309 None:intergenic
AATGTCATCAAGAGTCTTCA+TGG 0.375800 4_1:+45505924 Msa0550100:CDS
ATGGCAGAAGAAGCAGTTCT+TGG 0.380478 4_1:+45505822 Msa0550100:CDS
TACGGTCCACTGCTTCATTT+CGG 0.381127 4_1:-45513116 None:intergenic
TATATCACCACTGTTATAAA+GGG 0.387936 4_1:-45514814 None:intergenic
CTCACTCTCTGTGACTTAAT+AGG 0.389562 4_1:+45513629 Msa0550100:CDS
CCAATATCAAGCAATACATT+TGG 0.391917 4_1:+45514612 Msa0550100:three_prime_UTR
AGGCCAACAATGATAATGTA+TGG 0.396670 4_1:+45514287 Msa0550100:intron
AAGAATAAATGGGTGGAAAT+GGG 0.403506 4_1:+45507056 Msa0550100:CDS
TCTGCTTCTTCAAATACAAC+AGG 0.409658 4_1:+45507336 Msa0550100:CDS
GTGAAGCAAATTCATGAATC+TGG 0.409753 4_1:+45512526 Msa0550100:CDS
AACGATGAGATTAAAGATTC+AGG 0.411017 4_1:+45505858 Msa0550100:CDS
CATGGGGACTTTCTCTTGAA+AGG 0.415287 4_1:+45514083 Msa0550100:CDS
TATCTCCAGAGATGAACTTC+AGG 0.416797 4_1:+45506170 Msa0550100:CDS
TTCATCTCTGGAGATACCTT+CGG 0.418177 4_1:-45506163 None:intergenic
GCTGAGTTCCATCAGATAGA+AGG 0.424934 4_1:+45513147 Msa0550100:CDS
TACTTTGTTGCAGTGGGGAG+TGG 0.425940 4_1:+45509800 Msa0550100:intron
ATCACGAGCAGGATGTTGTT+GGG 0.429335 4_1:-45512357 None:intergenic
GTGCCAGCTGGTAAAGCATC+CGG 0.436309 4_1:-45512755 None:intergenic
ACCTGAAATGTTGCGGCCGA+TGG 0.441480 4_1:+45514033 Msa0550100:CDS
GCTTTCAACATAATTATTTG+TGG 0.443741 4_1:-45510690 None:intergenic
TTCCCCTTTGCAATTTCTGT+TGG 0.447295 4_1:+45514720 Msa0550100:three_prime_UTR
TTCCCGGATGCTTTACCAGC+TGG 0.449839 4_1:+45512752 Msa0550100:CDS
CATGATTTCTTCTCACGCTT+AGG 0.453055 4_1:+45513659 Msa0550100:CDS
CTTTCAACATAATTATTTGT+GGG 0.453083 4_1:-45510689 None:intergenic
AACTACCTGAAGTTCATCTC+TGG 0.454281 4_1:-45506175 None:intergenic
CCAAAATTAGTTGAAATTCA+GGG 0.454614 4_1:-45506131 None:intergenic
TCCATGCTAGGTTCTGTGTA+TGG 0.455200 4_1:-45513855 None:intergenic
CGTGGATATAGGATATTAAG+AGG 0.457838 4_1:+45506058 Msa0550100:intron
TGGGAAAGCAACTCATATCT+AGG 0.457897 4_1:+45507075 Msa0550100:CDS
TATCTAATGCTGCAGGTTTG+AGG 0.459179 4_1:+45510661 Msa0550100:intron
GCTAAAGGTCAGCCTCTTGA+AGG 0.483989 4_1:+45509856 Msa0550100:CDS
AAAGTCCCCATGCAATAACT+TGG 0.488007 4_1:-45514072 None:intergenic
ACCCGCTGAACATAATCTTC+AGG 0.489399 4_1:-45512505 None:intergenic
TCTGTGTATGGATTGTAAGC+AGG 0.492584 4_1:-45513843 None:intergenic
GCGAACAGAAATGTGAAGAT+AGG 0.497269 4_1:-45505760 None:intergenic
GAGTACAACTACACTGCTAA+AGG 0.503823 4_1:+45509841 Msa0550100:CDS
CTCACGTACCTTCTATCTGA+TGG 0.507401 4_1:-45513155 None:intergenic
TCATCTCTGGAGATACCTTC+GGG 0.514328 4_1:-45506162 None:intergenic
TGGGTAGAAGTAGGAAACTC+TGG 0.514681 4_1:+45514001 Msa0550100:CDS
CCTGAAATGTTGCGGCCGAT+GGG 0.514857 4_1:+45514034 Msa0550100:CDS
ATCTGGTGGATATGAGTCTA+GGG 0.518465 4_1:+45512543 Msa0550100:CDS
TTGGTAGATATGCATATGAC+TGG 0.519858 4_1:+45512676 Msa0550100:intron
GAGCAGGATGTTGTTGGGGC+TGG 0.519969 4_1:-45512352 None:intergenic
GCCTGAAGATTATGTTCAGC+GGG 0.522388 4_1:+45512504 Msa0550100:CDS
AATCTGGTGGATATGAGTCT+AGG 0.523310 4_1:+45512542 Msa0550100:CDS
GCGGTTCTTAGGTTTGAGAA+TGG 0.524236 4_1:+45505803 Msa0550100:exon
ACATGGGTGTTAACTGATGA+AGG 0.528044 4_1:+45506084 Msa0550100:CDS
CAAATAATTATGTTGAAAGC+AGG 0.529786 4_1:+45510693 Msa0550100:CDS
TTTATAATCTAGGACATGGA+AGG 0.529872 4_1:+45508413 Msa0550100:intron
AGCAGGTTTGAATTTCAGCT+TGG 0.531031 4_1:-45513826 None:intergenic
ATATTGCAAATGCAGGGCAT+TGG 0.535921 4_1:+45508240 Msa0550100:intron
AAACCAACAGAAATTGCAAA+GGG 0.538353 4_1:-45514723 None:intergenic
CAGTTGTGTGGGTCCGCAGA+AGG 0.541428 4_1:-45512722 None:intergenic
TAGAGAAATATTTATGACAT+GGG 0.544237 4_1:+45514692 Msa0550100:three_prime_UTR
AATCACGAGCAGGATGTTGT+TGG 0.550429 4_1:-45512358 None:intergenic
TTATAATCTAGGACATGGAA+GGG 0.551939 4_1:+45508414 Msa0550100:intron
AAGATGTCCAAGTTATTGCA+TGG 0.554823 4_1:+45514065 Msa0550100:CDS
GATGCTTTACCAGCTGGCAC+AGG 0.556280 4_1:+45512758 Msa0550100:CDS
TCTTCAAATACAACAGGGAC+AGG 0.557365 4_1:+45507342 Msa0550100:CDS
AGGATATTAAGAGGGAGACA+TGG 0.561811 4_1:+45506067 Msa0550100:intron
ACAGGCTGCTAAGAATAAAT+GGG 0.564845 4_1:+45507046 Msa0550100:CDS
CAAAATTAGTTGAAATTCAG+GGG 0.565317 4_1:-45506130 None:intergenic
CTTCAAGATAGCTTGTGCAC+AGG 0.567618 4_1:+45507028 Msa0550100:CDS
ATGTTGTTGGGGCTGGAACA+AGG 0.568157 4_1:-45512345 None:intergenic
TGCCAGCTGGTAAAGCATCC+GGG 0.570368 4_1:-45512754 None:intergenic
GGCCAACAATGATAATGTAT+GGG 0.574828 4_1:+45514288 Msa0550100:intron
CTGGTTGAAGGTCCAAGATG+TGG 0.575608 4_1:+45507297 Msa0550100:intron
CAGAGATCTCTTCGGCCACA+AGG 0.576224 4_1:+45514322 Msa0550100:CDS
GATAACATCAGAGATCTCTT+CGG 0.577235 4_1:+45514314 Msa0550100:CDS
TGAGTCCTCGATCACATACA+AGG 0.577373 4_1:-45513610 None:intergenic
ACATACAAACCTGTGCCAGC+TGG 0.581794 4_1:-45512767 None:intergenic
AAGCAAATTCATGAATCTGG+TGG 0.584637 4_1:+45512529 Msa0550100:CDS
GGGAAGAAACAGCAGTTGTG+TGG 0.585320 4_1:-45512734 None:intergenic
AGATGTCCAAGTTATTGCAT+GGG 0.585697 4_1:+45514066 Msa0550100:CDS
GGATATTAAGAGGGAGACAT+GGG 0.586886 4_1:+45506068 Msa0550100:intron
TCCATACACAGAACCTAGCA+TGG 0.588226 4_1:+45513854 Msa0550100:CDS
TAGGACATGGAAGGGTTACT+CGG 0.591543 4_1:+45508422 Msa0550100:intron
AAAGCAACTCATATCTAGGA+AGG 0.600368 4_1:+45507079 Msa0550100:CDS
GGAACTCAGCAAGATGTGTA+CGG 0.600616 4_1:-45513134 None:intergenic
CAAGCTATCTTGAAGACTGA+AGG 0.601060 4_1:-45507020 None:intergenic
GCCGCACAATAGAACGGCGA+CGG 0.602780 4_1:-45505782 None:intergenic
TGAAGACTGCCACCTTCAAG+AGG 0.603906 4_1:-45509868 None:intergenic
AACAGAAATGTGAAGATAGG+TGG 0.605431 4_1:-45505757 None:intergenic
GTAGAGAAATATTTATGACA+TGG 0.607873 4_1:+45514691 Msa0550100:three_prime_UTR
TCGTATAACAGTTATCATGA+AGG 0.610125 4_1:+45513968 Msa0550100:intron
CACCTGAAAATCTCCATGCT+AGG 0.612290 4_1:-45513867 None:intergenic
TAACTCGAGATAACTTTCAG+AGG 0.616702 4_1:+45508496 Msa0550100:CDS
GCCGTCGCCGTTCTATTGTG+CGG 0.616946 4_1:+45505781 Msa0550100:five_prime_UTR
TCAGGCCTTGTATGTGATCG+AGG 0.620832 4_1:+45513605 Msa0550100:intron
TGTTCAGACCTGAAATGTTG+CGG 0.621149 4_1:+45514026 Msa0550100:CDS
GGAAGAAACAGCAGTTGTGT+GGG 0.622693 4_1:-45512733 None:intergenic
GTGTCATGTGAATCACGAGC+AGG 0.626400 4_1:-45512368 None:intergenic
GGTGAATTTGCAGCTGAACG+TGG 0.628430 4_1:+45505879 Msa0550100:CDS
CAAACCAACAGAAATTGCAA+AGG 0.633270 4_1:-45514724 None:intergenic
AAAGGTCAGCCTCTTGAAGG+TGG 0.635059 4_1:+45509859 Msa0550100:CDS
TGCATATGACTGGAAAAGAG+AGG 0.636420 4_1:+45512686 Msa0550100:CDS
GAACAATCCCTTTATAACAG+TGG 0.642484 4_1:+45514807 Msa0550100:three_prime_UTR
GGCTGCTAAGAATAAATGGG+TGG 0.644736 4_1:+45507049 Msa0550100:CDS
ACATCTTCAGGAAGTCCCAT+CGG 0.645307 4_1:-45514049 None:intergenic
TCACGAGCAGGATGTTGTTG+GGG 0.645590 4_1:-45512356 None:intergenic
AGAACCGCCGCACAATAGAA+CGG 0.646809 4_1:-45505788 None:intergenic
CTGCTTCTTCAAATACAACA+GGG 0.647717 4_1:+45507337 Msa0550100:CDS
GTCGCCGTTCTATTGTGCGG+CGG 0.649096 4_1:+45505784 Msa0550100:five_prime_UTR
GATGTCCAAGTTATTGCATG+GGG 0.652254 4_1:+45514067 Msa0550100:CDS
TGCCTGAAGATTATGTTCAG+CGG 0.652900 4_1:+45512503 Msa0550100:CDS
CGACTTGGAATTGAATGAAG+TGG 0.657604 4_1:+45514544 Msa0550100:exon
GTGGATATAGGATATTAAGA+GGG 0.659435 4_1:+45506059 Msa0550100:intron
CTGGTGGATATGAGTCTAGG+GGG 0.660548 4_1:+45512545 Msa0550100:CDS
TTTCAGATACGTCGATGCTG+TGG 0.662586 4_1:+45505947 Msa0550100:CDS
TGACATTGACGATTTCGTTG+TGG 0.667924 4_1:-45505908 None:intergenic
TGTATTCCGAAATGAAGCAG+TGG 0.678250 4_1:+45513110 Msa0550100:CDS
TCTGGTGGATATGAGTCTAG+GGG 0.691706 4_1:+45512544 Msa0550100:CDS
TCTCTGGAGATACCTTCGGG+CGG 0.738824 4_1:-45506159 None:intergenic
AACCAACAGAAATTGCAAAG+GGG 0.744711 4_1:-45514722 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATAAATAAAAAAAT+AGG + chr4_1:45509553-45509572 Msa0550100:intron 0.0%
!!! ATAAAATGTCAATTTAATTT+TGG - chr4_1:45505994-45506013 None:intergenic 10.0%
!!! TAATTTTCTCAAGTTAATAA+CGG + chr4_1:45506451-45506470 Msa0550100:intron 15.0%
!!! CATTTTTTTTTCTTTCTTAA+AGG - chr4_1:45506805-45506824 None:intergenic 15.0%
!!! TTGAATCTAATTGTTTTTTA+TGG + chr4_1:45506979-45506998 Msa0550100:intron 15.0%
!! TAATGTTCTATTAAAATTGA+GGG + chr4_1:45507488-45507507 Msa0550100:intron 15.0%
!! ATGAAATAATTTATGTTTCT+TGG - chr4_1:45508900-45508919 None:intergenic 15.0%
!! AAGAAACATAAATTATTTCA+TGG + chr4_1:45508899-45508918 Msa0550100:intron 15.0%
!!! AATTTGAAAAAGTTTTATGT+AGG - chr4_1:45510294-45510313 None:intergenic 15.0%
!! TTAGATGTAAAGAATAATAA+TGG + chr4_1:45510935-45510954 Msa0550100:intron 15.0%
!!! ATCATTCAAATAAAAGATTT+TGG - chr4_1:45512005-45512024 None:intergenic 15.0%
!!! AAAATCTTTTATTTGAATGA+TGG + chr4_1:45512004-45512023 Msa0550100:intron 15.0%
!!! AAATATTTTTTTGGAGAAAA+TGG - chr4_1:45513078-45513097 None:intergenic 15.0%
!!! TCTATAGAGAAATATTTTTT+TGG - chr4_1:45513087-45513106 None:intergenic 15.0%
!!! AAATTAATTCATTTTACTGT+TGG - chr4_1:45514145-45514164 None:intergenic 15.0%
!!! TTTTTTTTGTTGTCTTTTTA+AGG + chr4_1:45514392-45514411 Msa0550100:intron 15.0%
!!! TTTTTTTGTTGTCTTTTTAA+GGG + chr4_1:45514393-45514412 Msa0550100:intron 15.0%
!! TACTACTAAATAATGTATTG+CGG - chr4_1:45506345-45506364 None:intergenic 20.0%
!! TACAAAATATTGTGAAATAG+TGG + chr4_1:45506363-45506382 Msa0550100:intron 20.0%
!! AGAAAGAAAAAAAAATGAGT+TGG + chr4_1:45506808-45506827 Msa0550100:intron 20.0%
!!! ATTCTAAATCTACTACTTTT+GGG + chr4_1:45507112-45507131 Msa0550100:intron 20.0%
!! CTAATGTTCTATTAAAATTG+AGG + chr4_1:45507487-45507506 Msa0550100:intron 20.0%
!! AATGTTCTATTAAAATTGAG+GGG + chr4_1:45507489-45507508 Msa0550100:intron 20.0%
!! AATCAGATAATAATAGATAG+TGG + chr4_1:45507550-45507569 Msa0550100:intron 20.0%
!! GTTTCCATATAATTAACATA+AGG - chr4_1:45508142-45508161 None:intergenic 20.0%
!!! ATATTTTATAATCTAGGACA+TGG + chr4_1:45508409-45508428 Msa0550100:intron 20.0%
!! AAAATGGGAAAAATTATTAC+TGG + chr4_1:45508754-45508773 Msa0550100:intron 20.0%
!! TTGTTGTATGTATCATAATA+TGG - chr4_1:45508807-45508826 None:intergenic 20.0%
!! TGGAAAAATTACATTAACTT+TGG - chr4_1:45509486-45509505 None:intergenic 20.0%
!!! GATGTATTTTTTTATGATAC+AGG - chr4_1:45510222-45510241 None:intergenic 20.0%
!!! TTATTTGATGTTCACTTTTT+TGG - chr4_1:45510408-45510427 None:intergenic 20.0%
!! CTTTCAACATAATTATTTGT+GGG - chr4_1:45510692-45510711 None:intergenic 20.0%
!! TTCTACTAAGGATTTATTAA+AGG - chr4_1:45511107-45511126 None:intergenic 20.0%
!!! GAATCCCAAATTTTTTAATA+TGG + chr4_1:45511140-45511159 Msa0550100:intron 20.0%
!! GAAGCCATATTAAAAAATTT+GGG - chr4_1:45511147-45511166 None:intergenic 20.0%
!! TCTTGCTTATTTATGTTATT+TGG + chr4_1:45512202-45512221 Msa0550100:intron 20.0%
!!! CTTGCTTATTTATGTTATTT+GGG + chr4_1:45512203-45512222 Msa0550100:intron 20.0%
!!! TTGCTTATTTATGTTATTTG+GGG + chr4_1:45512204-45512223 Msa0550100:intron 20.0%
!!! TTACATCTTAATGCTTTAAA+TGG + chr4_1:45512302-45512321 Msa0550100:intron 20.0%
!! GAAAGAAAAATGAAGATAAT+AGG - chr4_1:45512859-45512878 None:intergenic 20.0%
!! GTGGAAAAAAAAATCATAAT+TGG - chr4_1:45513261-45513280 None:intergenic 20.0%
!! TTGAACCATAAAAGTAAAAA+GGG - chr4_1:45513525-45513544 None:intergenic 20.0%
!! ATTGAACCATAAAAGTAAAA+AGG - chr4_1:45513526-45513545 None:intergenic 20.0%
!! AACAAATTTAGTGAATGTAT+CGG + chr4_1:45514195-45514214 Msa0550100:intron 20.0%
!!! TTGTTATTTTTCCTAAAAAC+AGG + chr4_1:45514267-45514286 Msa0550100:intron 20.0%
!! TGAATAAATCACTGTTTATT+TGG + chr4_1:45514366-45514385 Msa0550100:intron 20.0%
!! GAATAAATCACTGTTTATTT+GGG + chr4_1:45514367-45514386 Msa0550100:intron 20.0%
!! AAAAAAACATGGAAAATACA+TGG - chr4_1:45514484-45514503 None:intergenic 20.0%
!! AACAAATATATCAGACATAA+TGG - chr4_1:45514571-45514590 None:intergenic 20.0%
!! TAGAGAAATATTTATGACAT+GGG + chr4_1:45514692-45514711 Msa0550100:three_prime_UTR 20.0%
! TAAATCGTTTGTGACAAATT+TGG + chr4_1:45506025-45506044 Msa0550100:intron 25.0%
! CAAAATTAGTTGAAATTCAG+GGG - chr4_1:45506133-45506152 None:intergenic 25.0%
! CCAAAATTAGTTGAAATTCA+GGG - chr4_1:45506134-45506153 None:intergenic 25.0%
! TCAGATTAAATGTATGTGTT+CGG + chr4_1:45506252-45506271 Msa0550100:intron 25.0%
!! GATTCTAAATCTACTACTTT+TGG + chr4_1:45507111-45507130 Msa0550100:intron 25.0%
! ACTTATCATAAACCAATTTC+TGG + chr4_1:45507278-45507297 Msa0550100:intron 25.0%
!!! AAGTTCTTTTTTCTTTCCTT+GGG + chr4_1:45507448-45507467 Msa0550100:intron 25.0%
! ATGTTCTATTAAAATTGAGG+GGG + chr4_1:45507490-45507509 Msa0550100:intron 25.0%
! TAAAACATGGATTTCAAAGA+AGG - chr4_1:45507845-45507864 None:intergenic 25.0%
!!! ATATGCTTATCTCTAAAACA+TGG - chr4_1:45507858-45507877 None:intergenic 25.0%
!!! TGTTTTAGAGATAAGCATAT+AGG + chr4_1:45507858-45507877 Msa0550100:intron 25.0%
!! TTTGGTTTATTGTATTACGT+TGG + chr4_1:45507895-45507914 Msa0550100:intron 25.0%
! TTCAACTAAATATGTGAGAT+AGG + chr4_1:45507950-45507969 Msa0550100:intron 25.0%
! TAAATATGTGAGATAGGTAT+AGG + chr4_1:45507956-45507975 Msa0550100:intron 25.0%
! TAAGTCATAACTAAAGAGAA+TGG - chr4_1:45508009-45508028 None:intergenic 25.0%
! TCCTCCTTATGTTAATTATA+TGG + chr4_1:45508135-45508154 Msa0550100:intron 25.0%
! TCCATATAATTAACATAAGG+AGG - chr4_1:45508139-45508158 None:intergenic 25.0%
! AAATGAAATGGTTATTACTG+TGG - chr4_1:45508309-45508328 None:intergenic 25.0%
! TGAAGAACAATCAAATGAAA+TGG - chr4_1:45508321-45508340 None:intergenic 25.0%
! TATGTATCATAATATGGATC+AGG - chr4_1:45508801-45508820 None:intergenic 25.0%
! TGAGAATATATAATGCAAGA+AGG + chr4_1:45508951-45508970 Msa0550100:intron 25.0%
! ATGAATCAGAAACTGTTAAT+TGG - chr4_1:45509084-45509103 None:intergenic 25.0%
! AAGACAATAAGAGAGTTAAA+TGG - chr4_1:45509273-45509292 None:intergenic 25.0%
! AAGATTCATATAACCAATCA+AGG - chr4_1:45509606-45509625 None:intergenic 25.0%
! CAATAGGAAAATTCATATTC+TGG + chr4_1:45509969-45509988 Msa0550100:intron 25.0%
! AATAAAGCATATACGATATG+TGG + chr4_1:45510080-45510099 Msa0550100:intron 25.0%
! ATATTGGACAGTATACATAT+AGG - chr4_1:45510111-45510130 None:intergenic 25.0%
! GCATAATTTCCTAAACATAT+TGG - chr4_1:45510127-45510146 None:intergenic 25.0%
!!! TAGGAAATTATGCGTTTTTT+TGG + chr4_1:45510134-45510153 Msa0550100:intron 25.0%
!!! TTTTTGGTAGTTTCTATATG+TGG + chr4_1:45510150-45510169 Msa0550100:intron 25.0%
! ATTTGTATGATGTGAACTTA+TGG + chr4_1:45510311-45510330 Msa0550100:intron 25.0%
! ACACAATGATCAAATATGTT+CGG - chr4_1:45510483-45510502 None:intergenic 25.0%
! CATTGTGTATTTAATAGATC+TGG + chr4_1:45510495-45510514 Msa0550100:intron 25.0%
!!! CATTTTTCCATTTTTAGGTA+CGG + chr4_1:45510519-45510538 Msa0550100:intron 25.0%
!!! ATTTTTCCATTTTTAGGTAC+GGG + chr4_1:45510520-45510539 Msa0550100:intron 25.0%
! TTACAAAATGTCAATCTCAA+AGG - chr4_1:45510637-45510656 None:intergenic 25.0%
!! TTGAGATTGACATTTTGTAA+TGG + chr4_1:45510637-45510656 Msa0550100:intron 25.0%
! GCTTTCAACATAATTATTTG+TGG - chr4_1:45510693-45510712 None:intergenic 25.0%
! CAAATAATTATGTTGAAAGC+AGG + chr4_1:45510693-45510712 Msa0550100:CDS 25.0%
!! AGTTTGATTTATTTATTGGG+GGG - chr4_1:45511014-45511033 None:intergenic 25.0%
!! GAGTTTGATTTATTTATTGG+GGG - chr4_1:45511015-45511034 None:intergenic 25.0%
!! CGAGTTTGATTTATTTATTG+GGG - chr4_1:45511016-45511035 None:intergenic 25.0%
!! CCGAGTTTGATTTATTTATT+GGG - chr4_1:45511017-45511036 None:intergenic 25.0%
! CCCAATAAATAAATCAAACT+CGG + chr4_1:45511014-45511033 Msa0550100:intron 25.0%
! CAGTGGAAAAATAAAATGTT+TGG + chr4_1:45511064-45511083 Msa0550100:intron 25.0%
! GGAAGCCATATTAAAAAATT+TGG - chr4_1:45511148-45511167 None:intergenic 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG + chr4_1:45511606-45511625 Msa0550100:intron 25.0%
! TTGATCTATTCTTCTTACAA+CGG - chr4_1:45511672-45511691 None:intergenic 25.0%
! TGTAAGAAGAATAGATCAAA+TGG + chr4_1:45511673-45511692 Msa0550100:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG - chr4_1:45511788-45511807 None:intergenic 25.0%
!! GATTCGGCTTTTATAATTTA+GGG - chr4_1:45511909-45511928 None:intergenic 25.0%
! TAACCTTACAATTTATTCCT+TGG + chr4_1:45512657-45512676 Msa0550100:intron 25.0%
! TGGTTTCTGCAAAATTATAA+TGG - chr4_1:45513058-45513077 None:intergenic 25.0%
! TGAATTGAAATGGAAAATCA+CGG - chr4_1:45513588-45513607 None:intergenic 25.0%
! ATGAGTTAAATGTTGAATGT+AGG + chr4_1:45513714-45513733 Msa0550100:intron 25.0%
! AAAATTTCTTTGTTGAGTTC+AGG + chr4_1:45513798-45513817 Msa0550100:intron 25.0%
! TGATTAACATGTAATCTCTT+GGG - chr4_1:45513943-45513962 None:intergenic 25.0%
! ACAAATTTAGTGAATGTATC+GGG + chr4_1:45514196-45514215 Msa0550100:intron 25.0%
!!! TATTTTCCATGTTTTTTTGC+AGG + chr4_1:45514486-45514505 Msa0550100:intron 25.0%
!! AAAAATTCAATATGTCGACT+TGG + chr4_1:45514529-45514548 Msa0550100:CDS 25.0%
!! TGGTAATAGCATTTTTCATT+TGG + chr4_1:45514669-45514688 Msa0550100:three_prime_UTR 25.0%
! GTAGAGAAATATTTATGACA+TGG + chr4_1:45514691-45514710 Msa0550100:three_prime_UTR 25.0%
! TTATAAAGGGATTGTTCAAT+AGG - chr4_1:45514804-45514823 None:intergenic 25.0%
AACGATGAGATTAAAGATTC+AGG + chr4_1:45505858-45505877 Msa0550100:CDS 30.0%
GTGGATATAGGATATTAAGA+GGG + chr4_1:45506059-45506078 Msa0550100:intron 30.0%
! CCCTGAATTTCAACTAATTT+TGG + chr4_1:45506131-45506150 Msa0550100:CDS 30.0%
GCCAAAATTAGTTGAAATTC+AGG - chr4_1:45506135-45506154 None:intergenic 30.0%
AAGCTTCAATAGTAGAAAAG+GGG - chr4_1:45506233-45506252 None:intergenic 30.0%
GAAGCTTCAATAGTAGAAAA+GGG - chr4_1:45506234-45506253 None:intergenic 30.0%
TGAAGCTTCAATAGTAGAAA+AGG - chr4_1:45506235-45506254 None:intergenic 30.0%
TTGTGAAATAGTGGTTATAG+TGG + chr4_1:45506372-45506391 Msa0550100:intron 30.0%
AAGATGGTAGAAAATAGACT+TGG + chr4_1:45506519-45506538 Msa0550100:intron 30.0%
AGATGGTAGAAAATAGACTT+GGG + chr4_1:45506520-45506539 Msa0550100:intron 30.0%
GATTCAAATCATTAGAGGTA+GGG + chr4_1:45506608-45506627 Msa0550100:intron 30.0%
ATTCAAATCATTAGAGGTAG+GGG + chr4_1:45506609-45506628 Msa0550100:intron 30.0%
! GTTTCTCTTGTAGTTTTTCT+AGG - chr4_1:45506639-45506658 None:intergenic 30.0%
TACAAGAGAAACTGTTATGA+AGG + chr4_1:45506647-45506666 Msa0550100:intron 30.0%
!! TGGTTTTTGAAAGAACACTA+TGG + chr4_1:45506840-45506859 Msa0550100:intron 30.0%
GTTACAGTTAGTATTGTATC+TGG + chr4_1:45506926-45506945 Msa0550100:intron 30.0%
TAAGAATAAATGGGTGGAAA+TGG + chr4_1:45507055-45507074 Msa0550100:CDS 30.0%
AAGAATAAATGGGTGGAAAT+GGG + chr4_1:45507056-45507075 Msa0550100:CDS 30.0%
TTGAGATGAGAATTACTTCA+TGG + chr4_1:45507245-45507264 Msa0550100:intron 30.0%
!! ATAAACCAATTTCTGGTTGA+AGG + chr4_1:45507285-45507304 Msa0550100:intron 30.0%
TAATTGTGTTGAAACTTGAG+AGG + chr4_1:45507405-45507424 Msa0550100:intron 30.0%
AATTGTGTTGAAACTTGAGA+GGG + chr4_1:45507406-45507425 Msa0550100:intron 30.0%
!!! GAAGTTCTTTTTTCTTTCCT+TGG + chr4_1:45507447-45507466 Msa0550100:intron 30.0%
!! ACAACTCTGAAGTATAAGAA+TGG - chr4_1:45507739-45507758 None:intergenic 30.0%
TCATAACTAAAGAGAATGGA+AGG - chr4_1:45508005-45508024 None:intergenic 30.0%
CTCTTTAGTTATGACTTATG+AGG + chr4_1:45508011-45508030 Msa0550100:intron 30.0%
! TTTATAATCTAGGACATGGA+AGG + chr4_1:45508413-45508432 Msa0550100:intron 30.0%
! TTATAATCTAGGACATGGAA+GGG + chr4_1:45508414-45508433 Msa0550100:intron 30.0%
!!! TTTCTTTTTGGAGCATAGTT+AGG - chr4_1:45508459-45508478 None:intergenic 30.0%
TCCTTAAACTGAATGTAGAT+TGG + chr4_1:45508530-45508549 Msa0550100:intron 30.0%
CCTTAAACTGAATGTAGATT+GGG + chr4_1:45508531-45508550 Msa0550100:intron 30.0%
CTTAAACTGAATGTAGATTG+GGG + chr4_1:45508532-45508551 Msa0550100:intron 30.0%
! TCATGGAAAAGTATAATGAC+CGG + chr4_1:45508916-45508935 Msa0550100:intron 30.0%
! AATTTGGTTAGCTGTATTTG+CGG - chr4_1:45508998-45509017 None:intergenic 30.0%
GAAAAATGGTGGTTGTAATT+TGG - chr4_1:45509014-45509033 None:intergenic 30.0%
TCTCTTATTGTCTTCAATGT+AGG + chr4_1:45509279-45509298 Msa0550100:intron 30.0%
! AATTTTTCCAGTCTTTCATG+AGG + chr4_1:45509496-45509515 Msa0550100:intron 30.0%
! ATTTTTCCAGTCTTTCATGA+GGG + chr4_1:45509497-45509516 Msa0550100:intron 30.0%
! TTCATGAGGGTGTAAAAAAA+AGG + chr4_1:45509510-45509529 Msa0550100:intron 30.0%
TTTAAGCTTGTAGCTTGATA+CGG + chr4_1:45510027-45510046 Msa0550100:intron 30.0%
GTATACTGTCCAATATGTTT+AGG + chr4_1:45510115-45510134 Msa0550100:intron 30.0%
!!! TGATGTTCACTTTTTTGGTA+AGG - chr4_1:45510403-45510422 None:intergenic 30.0%
CACAATGATCAAATATGTTC+GGG - chr4_1:45510482-45510501 None:intergenic 30.0%
!! CTGGACATTTTTCCATTTTT+AGG + chr4_1:45510514-45510533 Msa0550100:intron 30.0%
! AAAACAGATTTTCCACTGTA+TGG + chr4_1:45510550-45510569 Msa0550100:intron 30.0%
! AAACAGATTTTCCACTGTAT+GGG + chr4_1:45510551-45510570 Msa0550100:intron 30.0%
ATTATGTTGAAAGCAGGTAA+TGG + chr4_1:45510699-45510718 Msa0550100:intron 30.0%
!!! TGTGTGTGTGTTTCTTTTTT+TGG + chr4_1:45510769-45510788 Msa0550100:intron 30.0%
!!! CTTTTTTTGGTGTACAATAG+TGG + chr4_1:45510782-45510801 Msa0550100:intron 30.0%
GATGGTTTATATGAGATCAA+AGG - chr4_1:45510822-45510841 None:intergenic 30.0%
TTGTGTGTACATCATAGATT+AGG - chr4_1:45510881-45510900 None:intergenic 30.0%
! GCCGAGTTTGATTTATTTAT+TGG - chr4_1:45511018-45511037 None:intergenic 30.0%
CTAAGGATTTATTAAAGGTC+AGG - chr4_1:45511102-45511121 None:intergenic 30.0%
TTTGACTATCAGTTCTACTA+AGG - chr4_1:45511119-45511138 None:intergenic 30.0%
TGAAATGTAACTTCAGCAAA+AGG + chr4_1:45511195-45511214 Msa0550100:intron 30.0%
ATATCTAAACCGTGTAACTT+GGG - chr4_1:45511267-45511286 None:intergenic 30.0%
TTACACGGTTTAGATATCTT+GGG + chr4_1:45511270-45511289 Msa0550100:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG - chr4_1:45511602-45511621 None:intergenic 30.0%
AAGAAGAATAGATCAAATGG+AGG + chr4_1:45511676-45511695 Msa0550100:intron 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG - chr4_1:45511731-45511750 None:intergenic 30.0%
! TTTTCGAATGGTTTCTCTAA+TGG - chr4_1:45511741-45511760 None:intergenic 30.0%
AACCATTCGAAAAGATTTAG+AGG + chr4_1:45511748-45511767 Msa0550100:intron 30.0%
! TGGTTTTTGATAGAACACTA+TGG + chr4_1:45511792-45511811 Msa0550100:intron 30.0%
! TTGTTGTTGTTGTTGTTGTT+TGG + chr4_1:45511863-45511882 Msa0550100:intron 30.0%
! GGATTCGGCTTTTATAATTT+AGG - chr4_1:45511910-45511929 None:intergenic 30.0%
TTTATAACAGTCACTACTGA+AGG - chr4_1:45512100-45512119 None:intergenic 30.0%
! TTATTTATGTTATTTGGGGC+TGG + chr4_1:45512208-45512227 Msa0550100:intron 30.0%
! TTCACATGACACATTCTTTT+TGG + chr4_1:45512379-45512398 Msa0550100:CDS 30.0%
CTCGTAAGAAAATGTATTGA+GGG - chr4_1:45512585-45512604 None:intergenic 30.0%
CTACCAAGGAATAAATTGTA+AGG - chr4_1:45512663-45512682 None:intergenic 30.0%
AAGCAAATAAAAACCTTCTG+CGG + chr4_1:45512709-45512728 Msa0550100:CDS 30.0%
TGTATGATTGTGTTGTGTTT+GGG + chr4_1:45512821-45512840 Msa0550100:intron 30.0%
! TACAAAGTACTTCTGTATTC+TGG + chr4_1:45512942-45512961 Msa0550100:intron 30.0%
AGTATAATCTATTATCCCTG+TGG - chr4_1:45512987-45513006 None:intergenic 30.0%
AAATGATGCAAGCATTAATG+AGG - chr4_1:45513025-45513044 None:intergenic 30.0%
TTCGTTTGTAAAAAGGTGAA+CGG - chr4_1:45513218-45513237 None:intergenic 30.0%
! GATCGTTTTCGTTTGTAAAA+AGG - chr4_1:45513225-45513244 None:intergenic 30.0%
! TTTTCCACATCATACTATAG+AGG + chr4_1:45513273-45513292 Msa0550100:intron 30.0%
!!! TCACTTTTTTGGTTCAATGA+GGG + chr4_1:45513330-45513349 Msa0550100:intron 30.0%
GAATTGAAATGGAAAATCAC+GGG - chr4_1:45513587-45513606 None:intergenic 30.0%
! GTGATTTTCCATTTCAATTC+AGG + chr4_1:45513587-45513606 Msa0550100:intron 30.0%
CAAGCCAAATAATCATTACA+GGG - chr4_1:45513898-45513917 None:intergenic 30.0%
ACAAGCCAAATAATCATTAC+AGG - chr4_1:45513899-45513918 None:intergenic 30.0%
GTGATTAACATGTAATCTCT+TGG - chr4_1:45513944-45513963 None:intergenic 30.0%
TCGTATAACAGTTATCATGA+AGG + chr4_1:45513968-45513987 Msa0550100:intron 30.0%
ATCATGAAGGCTTCAAAAAA+TGG + chr4_1:45513981-45514000 Msa0550100:CDS 30.0%
TCATGAAGGCTTCAAAAAAT+GGG + chr4_1:45513982-45514001 Msa0550100:CDS 30.0%
TTCAAAAAATGGGTAGAAGT+AGG + chr4_1:45513992-45514011 Msa0550100:CDS 30.0%
TACTGTTGGCAATGATTATA+TGG - chr4_1:45514131-45514150 None:intergenic 30.0%
CAAATTTAGTGAATGTATCG+GGG + chr4_1:45514197-45514216 Msa0550100:intron 30.0%
ATCCCATACATTATCATTGT+TGG - chr4_1:45514293-45514312 None:intergenic 30.0%
ACATGGAAAATACATGGTTT+AGG - chr4_1:45514478-45514497 None:intergenic 30.0%
CCAAATGTATTGCTTGATAT+TGG - chr4_1:45514615-45514634 None:intergenic 30.0%
CCAATATCAAGCAATACATT+TGG + chr4_1:45514612-45514631 Msa0550100:three_prime_UTR 30.0%
!!! TGTACGAAGAATTTTGATTG+TGG + chr4_1:45514649-45514668 Msa0550100:three_prime_UTR 30.0%
AAACCAACAGAAATTGCAAA+GGG - chr4_1:45514726-45514745 None:intergenic 30.0%
AACAGAAATGTGAAGATAGG+TGG - chr4_1:45505760-45505779 None:intergenic 35.0%
!! TAATCTCATCGTTGTTTTGC+AGG - chr4_1:45505851-45505870 None:intergenic 35.0%
AATGTCATCAAGAGTCTTCA+TGG + chr4_1:45505924-45505943 Msa0550100:CDS 35.0%
CGTGGATATAGGATATTAAG+AGG + chr4_1:45506058-45506077 Msa0550100:intron 35.0%
! AGGAAACACTTATGCTACTT+TGG + chr4_1:45506104-45506123 Msa0550100:CDS 35.0%
!! GGAAACACTTATGCTACTTT+GGG + chr4_1:45506105-45506124 Msa0550100:CDS 35.0%
TGTTATGCAATAGCGCTATA+GGG - chr4_1:45506298-45506317 None:intergenic 35.0%
TATTGTGGTAGCACATATAG+TGG + chr4_1:45506494-45506513 Msa0550100:intron 35.0%
! AGCACATATAGTGGAAAAGA+TGG + chr4_1:45506503-45506522 Msa0550100:intron 35.0%
AAAATAGACTTGGGTGGTTT+GGG + chr4_1:45506529-45506548 Msa0550100:intron 35.0%
GGATTCAAATCATTAGAGGT+AGG + chr4_1:45506607-45506626 Msa0550100:intron 35.0%
GGATCTAGAGATTAATGAGT+TGG + chr4_1:45506668-45506687 Msa0550100:intron 35.0%
! TCTAGAGATTAATGAGTTGG+CGG + chr4_1:45506671-45506690 Msa0550100:intron 35.0%
AAATCAAACCTGAGATCTTG+TGG - chr4_1:45506751-45506770 None:intergenic 35.0%
! TGTCGTTTGATTCATGTAGT+TGG + chr4_1:45506863-45506882 Msa0550100:intron 35.0%
TTTATGGTTGCAGAAAAAGC+TGG + chr4_1:45506995-45507014 Msa0550100:intron 35.0%
TTATGGTTGCAGAAAAAGCT+GGG + chr4_1:45506996-45507015 Msa0550100:intron 35.0%
ACAGGCTGCTAAGAATAAAT+GGG + chr4_1:45507046-45507065 Msa0550100:CDS 35.0%
AAAGCAACTCATATCTAGGA+AGG + chr4_1:45507079-45507098 Msa0550100:CDS 35.0%
TTGATGCACATTTGCATGTA+AGG + chr4_1:45507142-45507161 Msa0550100:intron 35.0%
TCTGCTTCTTCAAATACAAC+AGG + chr4_1:45507336-45507355 Msa0550100:CDS 35.0%
CTGCTTCTTCAAATACAACA+GGG + chr4_1:45507337-45507356 Msa0550100:CDS 35.0%
!!! TCTTTTTTCTTTCCTTGGGA+AGG + chr4_1:45507452-45507471 Msa0550100:intron 35.0%
!!! CTTTTTTCTTTCCTTGGGAA+GGG + chr4_1:45507453-45507472 Msa0550100:intron 35.0%
!!! TTTTTTCTTTCCTTGGGAAG+GGG + chr4_1:45507454-45507473 Msa0550100:intron 35.0%
GAATGGAAACCAGGTAAAAA+GGG - chr4_1:45507612-45507631 None:intergenic 35.0%
TGAATGGAAACCAGGTAAAA+AGG - chr4_1:45507613-45507632 None:intergenic 35.0%
GGTTTCTATTCATGCTTGTT+TGG + chr4_1:45507654-45507673 Msa0550100:intron 35.0%
! TGTCATTTCATCCCTATATG+CGG + chr4_1:45507692-45507711 Msa0550100:intron 35.0%
ACAAGTGCATGTTACCAAAT+GGG - chr4_1:45507773-45507792 None:intergenic 35.0%
AACAAGTGCATGTTACCAAA+TGG - chr4_1:45507774-45507793 None:intergenic 35.0%
! TAACATGCACTTGTTGATTG+TGG + chr4_1:45507779-45507798 Msa0550100:intron 35.0%
TAGAGATAAGCATATAGGTC+AGG + chr4_1:45507863-45507882 Msa0550100:intron 35.0%
!! AGAAAGTGACAAGTTTTGTG+TGG + chr4_1:45507918-45507937 Msa0550100:intron 35.0%
TATGTTTGCCTCTATTTGCT+TGG + chr4_1:45508085-45508104 Msa0550100:intron 35.0%
ATGTTTGCCTCTATTTGCTT+GGG + chr4_1:45508086-45508105 Msa0550100:intron 35.0%
AAATTTCCCCAAGCAAATAG+AGG - chr4_1:45508096-45508115 None:intergenic 35.0%
TTACCACATATTGCAAATGC+AGG + chr4_1:45508233-45508252 Msa0550100:intron 35.0%
TACCACATATTGCAAATGCA+GGG + chr4_1:45508234-45508253 Msa0550100:intron 35.0%
CTATGCTCCAAAAAGAAAGA+AGG + chr4_1:45508461-45508480 Msa0550100:CDS 35.0%
! GTGACAACCTTCTTTCTTTT+TGG - chr4_1:45508471-45508490 None:intergenic 35.0%
TAACTCGAGATAACTTTCAG+AGG + chr4_1:45508496-45508515 Msa0550100:CDS 35.0%
CCCAATCTACATTCAGTTTA+AGG - chr4_1:45508534-45508553 None:intergenic 35.0%
TACTTGACCAAGTATGATCA+CGG + chr4_1:45508699-45508718 Msa0550100:intron 35.0%
ACAACCAACTGTACAGAAAA+TGG + chr4_1:45508738-45508757 Msa0550100:intron 35.0%
CAACCAACTGTACAGAAAAT+GGG + chr4_1:45508739-45508758 Msa0550100:intron 35.0%
! TTTCCCATTTTCTGTACAGT+TGG - chr4_1:45508745-45508764 None:intergenic 35.0%
TTTGATCCATGTTGCTGTAA+AGG - chr4_1:45508844-45508863 None:intergenic 35.0%
! CATGGAAAAGTATAATGACC+GGG + chr4_1:45508917-45508936 Msa0550100:intron 35.0%
TTCTTTGTCAAGGTAAACGA+GGG - chr4_1:45509433-45509452 None:intergenic 35.0%
TTTCTTTGTCAAGGTAAACG+AGG - chr4_1:45509434-45509453 None:intergenic 35.0%
TGTGTCCAACCTGTAAAAAT+AGG + chr4_1:45509457-45509476 Msa0550100:intron 35.0%
AAAAAATAGGCCATGTCATC+CGG + chr4_1:45509566-45509585 Msa0550100:intron 35.0%
TAACGCTTGAAAACCTTGAT+TGG + chr4_1:45509590-45509609 Msa0550100:intron 35.0%
ACTGTATTACTTTGTTGCAG+TGG + chr4_1:45509793-45509812 Msa0550100:intron 35.0%
CTGTATTACTTTGTTGCAGT+GGG + chr4_1:45509794-45509813 Msa0550100:intron 35.0%
TGTATTACTTTGTTGCAGTG+GGG + chr4_1:45509795-45509814 Msa0550100:intron 35.0%
TATCTTCTTGCCTTTAACAG+TGG - chr4_1:45509895-45509914 None:intergenic 35.0%
!! AACATAAGCAAAAGCATCGT+CGG + chr4_1:45509994-45510013 Msa0550100:intron 35.0%
! AACAGATTTTCCACTGTATG+GGG + chr4_1:45510552-45510571 Msa0550100:intron 35.0%
! TGAGTCTTATATTTGTCCTG+TGG + chr4_1:45510575-45510594 Msa0550100:intron 35.0%
TAATGGTTATCTAATGCTGC+AGG + chr4_1:45510654-45510673 Msa0550100:intron 35.0%
!! ACACTAGAAAGGTATCAACA+CGG - chr4_1:45510736-45510755 None:intergenic 35.0%
AGGGTTACAAAGCTTTACAT+TGG - chr4_1:45510984-45511003 None:intergenic 35.0%
!! ATCAAACTCGGCACTTTTTA+AGG + chr4_1:45511026-45511045 Msa0550100:intron 35.0%
ATATCATACCCCAAGTTACA+CGG + chr4_1:45511255-45511274 Msa0550100:intron 35.0%
TATCTAAACCGTGTAACTTG+GGG - chr4_1:45511266-45511285 None:intergenic 35.0%
GATATCTAAACCGTGTAACT+TGG - chr4_1:45511268-45511287 None:intergenic 35.0%
GTTACACGGTTTAGATATCT+TGG + chr4_1:45511269-45511288 Msa0550100:intron 35.0%
TACATCATCGTATTCAAGCT+GGG + chr4_1:45511330-45511349 Msa0550100:intron 35.0%
! AAAGTACCACTTAAGCTGAA+AGG + chr4_1:45511395-45511414 Msa0550100:intron 35.0%
AACTTTCCTTTCAGCTTAAG+TGG - chr4_1:45511404-45511423 None:intergenic 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG + chr4_1:45511408-45511427 Msa0550100:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG + chr4_1:45511595-45511614 Msa0550100:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG + chr4_1:45511615-45511634 Msa0550100:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG + chr4_1:45511620-45511639 Msa0550100:intron 35.0%
! GACCTCTAAATCTTTTCGAA+TGG - chr4_1:45511753-45511772 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG + chr4_1:45511760-45511779 Msa0550100:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG + chr4_1:45511772-45511791 Msa0550100:intron 35.0%
AAAAGCCGAATCCAAAATCT+TGG + chr4_1:45511917-45511936 Msa0550100:intron 35.0%
! AAAATCTTGGTGCACTGAAT+CGG + chr4_1:45511930-45511949 Msa0550100:intron 35.0%
TACTTCAATCTGTGTTTCAG+CGG + chr4_1:45511955-45511974 Msa0550100:intron 35.0%
AAGCAAGAAGCAATGAATCA+TGG - chr4_1:45512190-45512209 None:intergenic 35.0%
! ATGCTTTAAATGGCAGTTTC+TGG + chr4_1:45512312-45512331 Msa0550100:intron 35.0%
! CATGACACATTCTTTTTGGA+AGG + chr4_1:45512383-45512402 Msa0550100:CDS 35.0%
GTGAAGCAAATTCATGAATC+TGG + chr4_1:45512526-45512545 Msa0550100:CDS 35.0%
AAGCAAATTCATGAATCTGG+TGG + chr4_1:45512529-45512548 Msa0550100:CDS 35.0%
CCTCGTAAGAAAATGTATTG+AGG - chr4_1:45512586-45512605 None:intergenic 35.0%
! CCTCAATACATTTTCTTACG+AGG + chr4_1:45512583-45512602 Msa0550100:intron 35.0%
AGTCATATGCATATCTACCA+AGG - chr4_1:45512677-45512696 None:intergenic 35.0%
TTGGTAGATATGCATATGAC+TGG + chr4_1:45512676-45512695 Msa0550100:intron 35.0%
GTGTATGATTGTGTTGTGTT+TGG + chr4_1:45512820-45512839 Msa0550100:intron 35.0%
GTATGATTGTGTTGTGTTTG+GGG + chr4_1:45512822-45512841 Msa0550100:intron 35.0%
GAAGATAATAGGATGCTCAA+TGG - chr4_1:45512848-45512867 None:intergenic 35.0%
AATCATAATTGGACCATCGA+AGG - chr4_1:45513250-45513269 None:intergenic 35.0%
ATTGAACCAAAAAAGTGACG+CGG - chr4_1:45513328-45513347 None:intergenic 35.0%
!!! GTCACTTTTTTGGTTCAATG+AGG + chr4_1:45513329-45513348 Msa0550100:intron 35.0%
!!! CACTTTTTTGGTTCAATGAG+GGG + chr4_1:45513331-45513350 Msa0550100:intron 35.0%
AACAGCCTCTTGTGTAAAAT+AGG + chr4_1:45513419-45513438 Msa0550100:intron 35.0%
ACAGCCTCTTGTGTAAAATA+GGG + chr4_1:45513420-45513439 Msa0550100:intron 35.0%
! CTTACCCTATTTTACACAAG+AGG - chr4_1:45513427-45513446 None:intergenic 35.0%
CTCTTGTGTAAAATAGGGTA+AGG + chr4_1:45513425-45513444 Msa0550100:intron 35.0%
TAAAAGTAAAAAGGGCAACC+CGG - chr4_1:45513517-45513536 None:intergenic 35.0%
!! GGTTGCCCTTTTTACTTTTA+TGG + chr4_1:45513517-45513536 Msa0550100:intron 35.0%
! ACTTTTATGGTTCAATGCAC+TGG + chr4_1:45513530-45513549 Msa0550100:intron 35.0%
! CTTTTATGGTTCAATGCACT+GGG + chr4_1:45513531-45513550 Msa0550100:intron 35.0%
! TTTTATGGTTCAATGCACTG+GGG + chr4_1:45513532-45513551 Msa0550100:intron 35.0%
ATACAAGGCCTGAATTGAAA+TGG - chr4_1:45513598-45513617 None:intergenic 35.0%
GACTCCCTGTAATGATTATT+TGG + chr4_1:45513891-45513910 Msa0550100:intron 35.0%
AAGATGTCCAAGTTATTGCA+TGG + chr4_1:45514065-45514084 Msa0550100:CDS 35.0%
AGATGTCCAAGTTATTGCAT+GGG + chr4_1:45514066-45514085 Msa0550100:CDS 35.0%
CAATGATTATATGGCGTTCT+CGG - chr4_1:45514122-45514141 None:intergenic 35.0%
!! ATCATTGTTGGCCTGTTTTT+AGG - chr4_1:45514281-45514300 None:intergenic 35.0%
! AGGCCAACAATGATAATGTA+TGG + chr4_1:45514287-45514306 Msa0550100:intron 35.0%
! GGCCAACAATGATAATGTAT+GGG + chr4_1:45514288-45514307 Msa0550100:intron 35.0%
GATAACATCAGAGATCTCTT+CGG + chr4_1:45514314-45514333 Msa0550100:CDS 35.0%
AATCCCATAACAATACCTTG+TGG - chr4_1:45514340-45514359 None:intergenic 35.0%
AGGGTGTAAAACTTGATTGA+TGG + chr4_1:45514412-45514431 Msa0550100:intron 35.0%
GGGTGTAAAACTTGATTGAT+GGG + chr4_1:45514413-45514432 Msa0550100:intron 35.0%
!!! TTTCCATGTTTTTTTGCAGG+TGG + chr4_1:45514489-45514508 Msa0550100:intron 35.0%
AACCAACAGAAATTGCAAAG+GGG - chr4_1:45514725-45514744 None:intergenic 35.0%
CAAACCAACAGAAATTGCAA+AGG - chr4_1:45514727-45514746 None:intergenic 35.0%
GGGATTGTTCAATAGGTAAA+AGG - chr4_1:45514797-45514816 None:intergenic 35.0%
! TGAACGTTTTTCTTCACGAG+CGG - chr4_1:45505724-45505743 None:intergenic 40.0%
GCGAACAGAAATGTGAAGAT+AGG - chr4_1:45505763-45505782 None:intergenic 40.0%
TGACATTGACGATTTCGTTG+TGG - chr4_1:45505911-45505930 None:intergenic 40.0%
!! AAATTTGGTTTGCTACGACG+TGG + chr4_1:45506040-45506059 Msa0550100:intron 40.0%
AGGATATTAAGAGGGAGACA+TGG + chr4_1:45506067-45506086 Msa0550100:intron 40.0%
GGATATTAAGAGGGAGACAT+GGG + chr4_1:45506068-45506087 Msa0550100:intron 40.0%
ACATGGGTGTTAACTGATGA+AGG + chr4_1:45506084-45506103 Msa0550100:CDS 40.0%
! TTCATCTCTGGAGATACCTT+CGG - chr4_1:45506166-45506185 None:intergenic 40.0%
TATCTCCAGAGATGAACTTC+AGG + chr4_1:45506170-45506189 Msa0550100:CDS 40.0%
AACTACCTGAAGTTCATCTC+TGG - chr4_1:45506178-45506197 None:intergenic 40.0%
GTATGTGTTCGGTTAAGTAG+CGG + chr4_1:45506263-45506282 Msa0550100:intron 40.0%
CTGTTATGCAATAGCGCTAT+AGG - chr4_1:45506299-45506318 None:intergenic 40.0%
GCGCTATTGCATAACAGAAT+TGG + chr4_1:45506302-45506321 Msa0550100:intron 40.0%
GTGTGTTAGAGTCAGTATTG+TGG + chr4_1:45506479-45506498 Msa0550100:intron 40.0%
TGGTAGAAAATAGACTTGGG+TGG + chr4_1:45506523-45506542 Msa0550100:intron 40.0%
GAAAATAGACTTGGGTGGTT+TGG + chr4_1:45506528-45506547 Msa0550100:intron 40.0%
GCATTGTGGATTCTGTAGTA+AGG + chr4_1:45506565-45506584 Msa0550100:intron 40.0%
GGATTCTGTAGTAAGGAGAT+TGG + chr4_1:45506572-45506591 Msa0550100:intron 40.0%
AGTAAGGAGATTGGATCAGA+TGG + chr4_1:45506581-45506600 Msa0550100:intron 40.0%
GAGGGGATTCAAATCATTAG+AGG + chr4_1:45506603-45506622 Msa0550100:intron 40.0%
!! ATCTCAGGTTTGATTTTCCC+CGG + chr4_1:45506755-45506774 Msa0550100:intron 40.0%
GTAAACTAGCCCACCTAAAT+TGG - chr4_1:45506783-45506802 None:intergenic 40.0%
! AAATGAGTTGGCGAAAGACA+TGG + chr4_1:45506820-45506839 Msa0550100:intron 40.0%
TACGTGTTTGTGTGCTTCAT+AGG + chr4_1:45506951-45506970 Msa0550100:intron 40.0%
CAAGCTATCTTGAAGACTGA+AGG - chr4_1:45507023-45507042 None:intergenic 40.0%
CACAGGCTGCTAAGAATAAA+TGG + chr4_1:45507045-45507064 Msa0550100:CDS 40.0%
TGGGAAAGCAACTCATATCT+AGG + chr4_1:45507075-45507094 Msa0550100:CDS 40.0%
TTGGACCTTCAACCAGAAAT+TGG - chr4_1:45507293-45507312 None:intergenic 40.0%
TGACTCTATCTTCCACATCT+TGG - chr4_1:45507312-45507331 None:intergenic 40.0%
TCTTCAAATACAACAGGGAC+AGG + chr4_1:45507342-45507361 Msa0550100:CDS 40.0%
GTTGAAACTTGAGAGGGTAA+CGG + chr4_1:45507412-45507431 Msa0550100:intron 40.0%
! TTTTTCTTTCCTTGGGAAGG+GGG + chr4_1:45507455-45507474 Msa0550100:intron 40.0%
! AGTCAATCACCCTTTTTACC+TGG + chr4_1:45507600-45507619 Msa0550100:intron 40.0%
TTCAACGTTGAATGGAAACC+AGG - chr4_1:45507621-45507640 None:intergenic 40.0%
GTTTCCATTCAACGTTGAAG+AGG + chr4_1:45507622-45507641 Msa0550100:intron 40.0%
ATTTCATCCCTATATGCGGT+AGG + chr4_1:45507696-45507715 Msa0550100:intron 40.0%
GCAATTTCCTACCGCATATA+GGG - chr4_1:45507706-45507725 None:intergenic 40.0%
AGCAATTTCCTACCGCATAT+AGG - chr4_1:45507707-45507726 None:intergenic 40.0%
ATATGCGGTAGGAAATTGCT+AGG + chr4_1:45507707-45507726 Msa0550100:intron 40.0%
TGTTGATACACACACCCATT+TGG + chr4_1:45507756-45507775 Msa0550100:intron 40.0%
GTGAGATAGGTATAGGAAGT+TGG + chr4_1:45507963-45507982 Msa0550100:intron 40.0%
GATAGGTATAGGAAGTTGGA+AGG + chr4_1:45507967-45507986 Msa0550100:intron 40.0%
TATGACTTATGAGGTGTGCA+TGG + chr4_1:45508020-45508039 Msa0550100:intron 40.0%
! ATGGACTGCACTCTATTTCA+TGG + chr4_1:45508039-45508058 Msa0550100:intron 40.0%
TGGACTGCACTCTATTTCAT+GGG + chr4_1:45508040-45508059 Msa0550100:intron 40.0%
TGTTTGCCTCTATTTGCTTG+GGG + chr4_1:45508087-45508106 Msa0550100:intron 40.0%
ATGAGATATGCAGAACTCAC+AGG - chr4_1:45508205-45508224 None:intergenic 40.0%
ATATTGCAAATGCAGGGCAT+TGG + chr4_1:45508240-45508259 Msa0550100:intron 40.0%
! AAGGGTTACTCGGTGAAAAA+GGG + chr4_1:45508432-45508451 Msa0550100:CDS 40.0%
AACTGAATGTAGATTGGGGA+TGG + chr4_1:45508536-45508555 Msa0550100:intron 40.0%
CATACTTGGTCAAGTATAGC+TGG - chr4_1:45508695-45508714 None:intergenic 40.0%
TTTCTGTACAGTTGGTTGTG+TGG - chr4_1:45508737-45508756 None:intergenic 40.0%
TATAATGACCGGGAACAAGT+TGG + chr4_1:45508927-45508946 Msa0550100:intron 40.0%
! ATTCTCATCCAACTTGTTCC+CGG - chr4_1:45508938-45508957 None:intergenic 40.0%
GGAATACTCACCAAAATGCT+TGG + chr4_1:45508972-45508991 Msa0550100:intron 40.0%
TGTGAGGTAGAATGTTCATG+TGG - chr4_1:45509193-45509212 None:intergenic 40.0%
TCATACTTCTCTGCCATATC+AGG + chr4_1:45509319-45509338 Msa0550100:intron 40.0%
CATACTTCTCTGCCATATCA+GGG + chr4_1:45509320-45509339 Msa0550100:intron 40.0%
GCTGTCGTAAGAACTTTACT+TGG - chr4_1:45509355-45509374 None:intergenic 40.0%
AAGTAAACGCATCAGATGCA+TGG - chr4_1:45509407-45509426 None:intergenic 40.0%
GACACAGCATTTCTTTGTCA+AGG - chr4_1:45509443-45509462 None:intergenic 40.0%
GTCCAACCTGTAAAAATAGG+CGG + chr4_1:45509460-45509479 Msa0550100:intron 40.0%
TTTACACCCTCATGAAAGAC+TGG - chr4_1:45509506-45509525 None:intergenic 40.0%
GAGTACAACTACACTGCTAA+AGG + chr4_1:45509841-45509860 Msa0550100:CDS 40.0%
CAGTCTTCATCCACTGTTAA+AGG + chr4_1:45509882-45509901 Msa0550100:intron 40.0%
TTCCTCCTTTCCCCAATTTA+CGG + chr4_1:45509934-45509953 Msa0550100:intron 40.0%
CGTAAAGTTCCCGTAAATTG+GGG - chr4_1:45509947-45509966 None:intergenic 40.0%
CCGTAAAGTTCCCGTAAATT+GGG - chr4_1:45509948-45509967 None:intergenic 40.0%
CCCAATTTACGGGAACTTTA+CGG + chr4_1:45509945-45509964 Msa0550100:intron 40.0%
TCCGTAAAGTTCCCGTAAAT+TGG - chr4_1:45509949-45509968 None:intergenic 40.0%
TTGTTCGCGAATGTGAAGAT+TGG - chr4_1:45510266-45510285 None:intergenic 40.0%
TTTGAGCCCGTACCTAAAAA+TGG - chr4_1:45510529-45510548 None:intergenic 40.0%
AATAGACATCAAGCTTCCAC+AGG - chr4_1:45510594-45510613 None:intergenic 40.0%
TGGAAGCTTGATGTCTATTG+CGG + chr4_1:45510595-45510614 Msa0550100:intron 40.0%
TATCTAATGCTGCAGGTTTG+AGG + chr4_1:45510661-45510680 Msa0550100:intron 40.0%
! ATGTTGAAAGCAGGTAATGG+TGG + chr4_1:45510702-45510721 Msa0550100:intron 40.0%
CACACAGACAAACACTAGAA+AGG - chr4_1:45510747-45510766 None:intergenic 40.0%
ATTAGGAAAGCCACTAGGAT+TGG - chr4_1:45510864-45510883 None:intergenic 40.0%
CATAGATTAGGAAAGCCACT+AGG - chr4_1:45510869-45510888 None:intergenic 40.0%
TGATTTATTTATTGGGGGGC+AGG - chr4_1:45511010-45511029 None:intergenic 40.0%
!! AAACTCGGCACTTTTTAAGG+AGG + chr4_1:45511029-45511048 Msa0550100:intron 40.0%
AACTTCAGCAAAAGGAGAAG+TGG + chr4_1:45511203-45511222 Msa0550100:intron 40.0%
ACTTCAGCAAAAGGAGAAGT+GGG + chr4_1:45511204-45511223 Msa0550100:intron 40.0%
TCTTGGGTCCATAGTACAAA+AGG + chr4_1:45511286-45511305 Msa0550100:intron 40.0%
! TTCTCCGTCCTTTTGTACTA+TGG - chr4_1:45511297-45511316 None:intergenic 40.0%
GTACATCATCGTATTCAAGC+TGG + chr4_1:45511329-45511348 Msa0550100:intron 40.0%
GTGGTAAGACTAGACATGAT+AGG + chr4_1:45511537-45511556 Msa0550100:intron 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG + chr4_1:45511701-45511720 Msa0550100:intron 40.0%
!! TGTTGTTGTTTGGTAGTTGC+AGG + chr4_1:45511876-45511895 Msa0550100:intron 40.0%
! GTGCACCAAGATTTTGGATT+CGG - chr4_1:45511925-45511944 None:intergenic 40.0%
! GATTCAGTGCACCAAGATTT+TGG - chr4_1:45511931-45511950 None:intergenic 40.0%
ACTTCAATCTGTGTTTCAGC+GGG + chr4_1:45511956-45511975 Msa0550100:intron 40.0%
AAGGAACCTTTCGAAGAACA+CGG - chr4_1:45512081-45512100 None:intergenic 40.0%
GTGTGACATGTACTCAAGAT+GGG - chr4_1:45512454-45512473 None:intergenic 40.0%
TGTGTGACATGTACTCAAGA+TGG - chr4_1:45512455-45512474 None:intergenic 40.0%
!! GGCAGTTTCTTTGTTGTTGA+AGG - chr4_1:45512487-45512506 None:intergenic 40.0%
TGCCTGAAGATTATGTTCAG+CGG + chr4_1:45512503-45512522 Msa0550100:CDS 40.0%
! AATCTGGTGGATATGAGTCT+AGG + chr4_1:45512542-45512561 Msa0550100:CDS 40.0%
! ATCTGGTGGATATGAGTCTA+GGG + chr4_1:45512543-45512562 Msa0550100:CDS 40.0%
TGCATATGACTGGAAAAGAG+AGG + chr4_1:45512686-45512705 Msa0550100:CDS 40.0%
TGTATTCCGAAATGAAGCAG+TGG + chr4_1:45513110-45513129 Msa0550100:CDS 40.0%
! TAGAAGGTACGTGAGCTATT+AGG + chr4_1:45513163-45513182 Msa0550100:intron 40.0%
TACGTGAGCTATTAGGTTAC+TGG + chr4_1:45513170-45513189 Msa0550100:intron 40.0%
ACGTGAGCTATTAGGTTACT+GGG + chr4_1:45513171-45513190 Msa0550100:intron 40.0%
TCCACATCATACTATAGAGG+AGG + chr4_1:45513276-45513295 Msa0550100:intron 40.0%
ACCTCCTCTATAGTATGATG+TGG - chr4_1:45513280-45513299 None:intergenic 40.0%
ACATCATACTATAGAGGAGG+TGG + chr4_1:45513279-45513298 Msa0550100:intron 40.0%
CATCATACTATAGAGGAGGT+GGG + chr4_1:45513280-45513299 Msa0550100:intron 40.0%
ATCATACTATAGAGGAGGTG+GGG + chr4_1:45513281-45513300 Msa0550100:intron 40.0%
!!! TTTTTGCCGCGTCACTTTTT+TGG + chr4_1:45513319-45513338 Msa0550100:intron 40.0%
GTTGTTGTCATGTGACTGAA+AGG + chr4_1:45513376-45513395 Msa0550100:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr4_1:45513451-45513470 Msa0550100:intron 40.0%
TTTATGGTTCAATGCACTGG+GGG + chr4_1:45513533-45513552 Msa0550100:intron 40.0%
CTCACTCTCTGTGACTTAAT+AGG + chr4_1:45513629-45513648 Msa0550100:CDS 40.0%
CATGATTTCTTCTCACGCTT+AGG + chr4_1:45513659-45513678 Msa0550100:CDS 40.0%
AGCAGGTTTGAATTTCAGCT+TGG - chr4_1:45513829-45513848 None:intergenic 40.0%
! TCTGTGTATGGATTGTAAGC+AGG - chr4_1:45513846-45513865 None:intergenic 40.0%
! AACCTAGCATGGAGATTTTC+AGG + chr4_1:45513865-45513884 Msa0550100:CDS 40.0%
TGTTCAGACCTGAAATGTTG+CGG + chr4_1:45514026-45514045 Msa0550100:CDS 40.0%
GCAATAACTTGGACATCTTC+AGG - chr4_1:45514064-45514083 None:intergenic 40.0%
GATGTCCAAGTTATTGCATG+GGG + chr4_1:45514067-45514086 Msa0550100:CDS 40.0%
AAAGTCCCCATGCAATAACT+TGG - chr4_1:45514075-45514094 None:intergenic 40.0%
GATCCACCTGCAAAAAAACA+TGG - chr4_1:45514495-45514514 None:intergenic 40.0%
!!! GTTTTTTTGCAGGTGGATCT+TGG + chr4_1:45514496-45514515 Msa0550100:intron 40.0%
! CGACTTGGAATTGAATGAAG+TGG + chr4_1:45514544-45514563 Msa0550100:exon 40.0%
TTCCCCTTTGCAATTTCTGT+TGG + chr4_1:45514720-45514739 Msa0550100:three_prime_UTR 40.0%
GCGGTTCTTAGGTTTGAGAA+TGG + chr4_1:45505803-45505822 Msa0550100:exon 45.0%
ATGGCAGAAGAAGCAGTTCT+TGG + chr4_1:45505822-45505841 Msa0550100:CDS 45.0%
TTTCAGATACGTCGATGCTG+TGG + chr4_1:45505947-45505966 Msa0550100:CDS 45.0%
! GTTTGCTACGACGTGGATAT+AGG + chr4_1:45506047-45506066 Msa0550100:intron 45.0%
! TCATCTCTGGAGATACCTTC+GGG - chr4_1:45506165-45506184 None:intergenic 45.0%
!! GCACTTAGAGAGAAGCATTG+TGG + chr4_1:45506551-45506570 Msa0550100:intron 45.0%
AAGGAGATTGGATCAGATGG+AGG + chr4_1:45506584-45506603 Msa0550100:intron 45.0%
AGGAGATTGGATCAGATGGA+GGG + chr4_1:45506585-45506604 Msa0550100:intron 45.0%
TCAAACCTGAGATCTTGTGG+AGG - chr4_1:45506748-45506767 None:intergenic 45.0%
!! ATTTTCCCCGGTGCCAATTT+AGG + chr4_1:45506767-45506786 Msa0550100:intron 45.0%
ATGTAGTTGGCACCACTTAG+TGG + chr4_1:45506876-45506895 Msa0550100:intron 45.0%
TGTAGTTGGCACCACTTAGT+GGG + chr4_1:45506877-45506896 Msa0550100:intron 45.0%
! CTTCAAGATAGCTTGTGCAC+AGG + chr4_1:45507028-45507047 Msa0550100:CDS 45.0%
GGCTGCTAAGAATAAATGGG+TGG + chr4_1:45507049-45507068 Msa0550100:CDS 45.0%
GTCTCCTCTTCAACGTTGAA+TGG - chr4_1:45507629-45507648 None:intergenic 45.0%
ACGTTGAAGAGGAGACTTGA+TGG + chr4_1:45507633-45507652 Msa0550100:intron 45.0%
! CACTTGTTGATTGTGGCTGA+CGG + chr4_1:45507786-45507805 Msa0550100:intron 45.0%
TAGGTCAGGTCTGTACTCTT+TGG + chr4_1:45507877-45507896 Msa0550100:intron 45.0%
CACTCTATTTCATGGGTGAG+TGG + chr4_1:45508047-45508066 Msa0550100:intron 45.0%
ATTTCATGGGTGAGTGGTGA+TGG + chr4_1:45508053-45508072 Msa0550100:intron 45.0%
TGCCCTGCATTTGCAATATG+TGG - chr4_1:45508239-45508258 None:intergenic 45.0%
TAGGACATGGAAGGGTTACT+CGG + chr4_1:45508422-45508441 Msa0550100:intron 45.0%
! GAAGGGTTACTCGGTGAAAA+AGG + chr4_1:45508431-45508450 Msa0550100:CDS 45.0%
TGAATGTAGATTGGGGATGG+CGG + chr4_1:45508539-45508558 Msa0550100:intron 45.0%
ACCAAGCCTTTACAGCAACA+TGG + chr4_1:45508835-45508854 Msa0550100:intron 45.0%
TCCATGTTGCTGTAAAGGCT+TGG - chr4_1:45508839-45508858 None:intergenic 45.0%
! GTATTTGCGGCCAAGCATTT+TGG - chr4_1:45508985-45509004 None:intergenic 45.0%
!! CAACCACCATTTTTCTCCAC+CGG + chr4_1:45509019-45509038 Msa0550100:intron 45.0%
AAACCGGTGGAGAAAAATGG+TGG - chr4_1:45509025-45509044 None:intergenic 45.0%
CACAAACCGGTGGAGAAAAA+TGG - chr4_1:45509028-45509047 None:intergenic 45.0%
!!! CATTTTTCTCCACCGGTTTG+TGG + chr4_1:45509026-45509045 Msa0550100:intron 45.0%
TCCCACATCAAACACGAACA+GGG + chr4_1:45509127-45509146 Msa0550100:intron 45.0%
TGGGAATGCAATTCGTGTTG+GGG - chr4_1:45509230-45509249 None:intergenic 45.0%
GTGGGAATGCAATTCGTGTT+GGG - chr4_1:45509231-45509250 None:intergenic 45.0%
TGTGGGAATGCAATTCGTGT+TGG - chr4_1:45509232-45509251 None:intergenic 45.0%
CGAATTGCATTCCCACAATG+TGG + chr4_1:45509235-45509254 Msa0550100:intron 45.0%
!! TGGTAGAAAGCACCCTGATA+TGG - chr4_1:45509335-45509354 None:intergenic 45.0%
!!! CTTTGGCCGCCTATTTTTAC+AGG - chr4_1:45509469-45509488 None:intergenic 45.0%
!! CAAGGTTTTCAAGCGTTAGC+CGG - chr4_1:45509588-45509607 None:intergenic 45.0%
ATTGGGGAAAGGAGGAAGAA+GGG - chr4_1:45509931-45509950 None:intergenic 45.0%
AATTGGGGAAAGGAGGAAGA+AGG - chr4_1:45509932-45509951 None:intergenic 45.0%
TCCTCCTTTCCCCAATTTAC+GGG + chr4_1:45509935-45509954 Msa0550100:intron 45.0%
AGTTCCCGTAAATTGGGGAA+AGG - chr4_1:45509942-45509961 None:intergenic 45.0%
ACGGGAACTTTACGGACAAT+AGG + chr4_1:45509953-45509972 Msa0550100:intron 45.0%
ATAAGACTCACCCCATACAG+TGG - chr4_1:45510565-45510584 None:intergenic 45.0%
!! TAGGATTGGACTAGTGGTGA+GGG - chr4_1:45510850-45510869 None:intergenic 45.0%
TTTATTTATTGGGGGGCAGG+AGG - chr4_1:45511007-45511026 None:intergenic 45.0%
TCTACCTTGGAGGTGAAAGT+TGG + chr4_1:45511227-45511246 Msa0550100:intron 45.0%
ATCTCCAACTTTCACCTCCA+AGG - chr4_1:45511234-45511253 None:intergenic 45.0%
GGGTCCATAGTACAAAAGGA+CGG + chr4_1:45511290-45511309 Msa0550100:intron 45.0%
ATCATCGTATTCAAGCTGGG+TGG + chr4_1:45511333-45511352 Msa0550100:intron 45.0%
TTCAAGCTGGGTGGTTGAAA+TGG + chr4_1:45511342-45511361 Msa0550100:intron 45.0%
TTGAAATGGAGAAGAGCCTC+AGG + chr4_1:45511356-45511375 Msa0550100:intron 45.0%
CTTATCGCACAAAACACCTG+AGG - chr4_1:45511375-45511394 None:intergenic 45.0%
GTTAGACCGGCAATGTTGTA+TGG + chr4_1:45511437-45511456 Msa0550100:intron 45.0%
ACCGGCAATGTTGTATGGTA+CGG + chr4_1:45511442-45511461 Msa0550100:intron 45.0%
TCCGTACCATACAACATTGC+CGG - chr4_1:45511446-45511465 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG + chr4_1:45511450-45511469 Msa0550100:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG + chr4_1:45511451-45511470 Msa0550100:intron 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG + chr4_1:45511490-45511509 Msa0550100:intron 45.0%
TGACACCATTAGAGAGAGAG+TGG + chr4_1:45511568-45511587 Msa0550100:intron 45.0%
GACACCATTAGAGAGAGAGT+GGG + chr4_1:45511569-45511588 Msa0550100:intron 45.0%
ACACCATTAGAGAGAGAGTG+GGG + chr4_1:45511570-45511589 Msa0550100:intron 45.0%
CTTCTTACAACGGCATCTAC+AGG - chr4_1:45511662-45511681 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG + chr4_1:45511685-45511704 Msa0550100:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG + chr4_1:45511695-45511714 Msa0550100:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr4_1:45506889-45506908 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr4_1:45506890-45506909 None:intergenic 45.0%
ATCTGTGTTTCAGCGGGTAT+AGG + chr4_1:45511962-45511981 Msa0550100:intron 45.0%
AGGAACCTTTCGAAGAACAC+GGG - chr4_1:45512080-45512099 None:intergenic 45.0%
ATCACGAGCAGGATGTTGTT+GGG - chr4_1:45512360-45512379 None:intergenic 45.0%
AATCACGAGCAGGATGTTGT+TGG - chr4_1:45512361-45512380 None:intergenic 45.0%
GCCTGAAGATTATGTTCAGC+GGG + chr4_1:45512504-45512523 Msa0550100:CDS 45.0%
ACCCGCTGAACATAATCTTC+AGG - chr4_1:45512508-45512527 None:intergenic 45.0%
! TCTGGTGGATATGAGTCTAG+GGG + chr4_1:45512544-45512563 Msa0550100:CDS 45.0%
GGAAGAAACAGCAGTTGTGT+GGG - chr4_1:45512736-45512755 None:intergenic 45.0%
!! ACACAACTGCTGTTTCTTCC+CGG + chr4_1:45512736-45512755 Msa0550100:CDS 45.0%
CTATTATCCCTGTGGATGCA+AGG - chr4_1:45512979-45512998 None:intergenic 45.0%
TACGGTCCACTGCTTCATTT+CGG - chr4_1:45513119-45513138 None:intergenic 45.0%
GGAACTCAGCAAGATGTGTA+CGG - chr4_1:45513137-45513156 None:intergenic 45.0%
GCTGAGTTCCATCAGATAGA+AGG + chr4_1:45513147-45513166 Msa0550100:CDS 45.0%
CTCACGTACCTTCTATCTGA+TGG - chr4_1:45513158-45513177 None:intergenic 45.0%
CATAATTGGACCATCGAAGG+TGG - chr4_1:45513247-45513266 None:intergenic 45.0%
TCATACTATAGAGGAGGTGG+GGG + chr4_1:45513282-45513301 Msa0550100:intron 45.0%
GTCATGTGACTGAAAGGTCA+CGG + chr4_1:45513382-45513401 Msa0550100:intron 45.0%
TCATGTGACTGAAAGGTCAC+GGG + chr4_1:45513383-45513402 Msa0550100:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr4_1:45513416-45513435 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr4_1:45513447-45513466 Msa0550100:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr4_1:45513450-45513469 Msa0550100:intron 45.0%
TGAGTCCTCGATCACATACA+AGG - chr4_1:45513613-45513632 None:intergenic 45.0%
TCCATACACAGAACCTAGCA+TGG + chr4_1:45513854-45513873 Msa0550100:CDS 45.0%
TCCATGCTAGGTTCTGTGTA+TGG - chr4_1:45513858-45513877 None:intergenic 45.0%
CACCTGAAAATCTCCATGCT+AGG - chr4_1:45513870-45513889 None:intergenic 45.0%
TGGGTAGAAGTAGGAAACTC+TGG + chr4_1:45514001-45514020 Msa0550100:CDS 45.0%
ACATCTTCAGGAAGTCCCAT+CGG - chr4_1:45514052-45514071 None:intergenic 45.0%
CATGGGGACTTTCTCTTGAA+AGG + chr4_1:45514083-45514102 Msa0550100:CDS 45.0%
!! TCGGCCACAAGGTATTGTTA+TGG + chr4_1:45514333-45514352 Msa0550100:intron 45.0%
!! CGGCCACAAGGTATTGTTAT+GGG + chr4_1:45514334-45514353 Msa0550100:intron 45.0%
!!! TAATTAATATTTTATAATCT+AGG + chr4_1:45508403-45508422 Msa0550100:intron 5.0%
!!! TATAGATTAATTTAATTTTA+TGG - chr4_1:45508872-45508891 None:intergenic 5.0%
!!! TATTTATTTATTTTTTTGAT+CGG - chr4_1:45509546-45509565 None:intergenic 5.0%
!!! ATATATTATGATTTTAATTA+TGG + chr4_1:45510191-45510210 Msa0550100:intron 5.0%
!! AAAACATATTTAATAAATTA+TGG + chr4_1:45510426-45510445 Msa0550100:intron 5.0%
!!! TTATATGTTTATAATTTTAA+AGG + chr4_1:45512903-45512922 Msa0550100:intron 5.0%
AGAACCGCCGCACAATAGAA+CGG - chr4_1:45505791-45505810 None:intergenic 50.0%
TCTATTGTGCGGCGGTTCTT+AGG + chr4_1:45505792-45505811 Msa0550100:five_prime_UTR 50.0%
GGTGAATTTGCAGCTGAACG+TGG + chr4_1:45505879-45505898 Msa0550100:CDS 50.0%
!!! ATTTTGGCTATTCCGCCCGA+AGG + chr4_1:45506147-45506166 Msa0550100:CDS 50.0%
GGAGATTGGATCAGATGGAG+GGG + chr4_1:45506586-45506605 Msa0550100:intron 50.0%
ACCACCAGAACAACCCAAGT+GGG - chr4_1:45506699-45506718 None:intergenic 50.0%
! TTGGGTTGTTCTGGTGGTGT+TGG + chr4_1:45506701-45506720 Msa0550100:intron 50.0%
!! GTGGTGTTGGCTTACGACTT+TGG + chr4_1:45506714-45506733 Msa0550100:intron 50.0%
GTGTTCCTCCACAAGATCTC+AGG + chr4_1:45506740-45506759 Msa0550100:intron 50.0%
TAGCCCACCTAAATTGGCAC+CGG - chr4_1:45506777-45506796 None:intergenic 50.0%
TGGCACCACTTAGTGGGATA+AGG + chr4_1:45506883-45506902 Msa0550100:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr4_1:45506891-45506910 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr4_1:45506888-45506907 Msa0550100:intron 50.0%
CTGGTTGAAGGTCCAAGATG+TGG + chr4_1:45507297-45507316 Msa0550100:intron 50.0%
! AGGGTAACGGTAGAAAGAGC+TGG + chr4_1:45507425-45507444 Msa0550100:intron 50.0%
CTACTGGCCGTGATCATACT+TGG - chr4_1:45508709-45508728 None:intergenic 50.0%
CTGTACAGTTGGTTGTGTGG+TGG - chr4_1:45508734-45508753 None:intergenic 50.0%
! CTGTCCAAAGTGCCACAAAC+CGG - chr4_1:45509041-45509060 None:intergenic 50.0%
GTGTTTGATGTGGGAGCTCT+GGG - chr4_1:45509122-45509141 None:intergenic 50.0%
CTCCCACATCAAACACGAAC+AGG + chr4_1:45509126-45509145 Msa0550100:intron 50.0%
CCCCTGTTCGTGTTTGATGT+GGG - chr4_1:45509131-45509150 None:intergenic 50.0%
CCCACATCAAACACGAACAG+GGG + chr4_1:45509128-45509147 Msa0550100:intron 50.0%
CCACATCAAACACGAACAGG+GGG + chr4_1:45509129-45509148 Msa0550100:intron 50.0%
! GGGTGATGATGACTTGTGTG+AGG - chr4_1:45509209-45509228 None:intergenic 50.0%
GGGAATGCAATTCGTGTTGG+GGG - chr4_1:45509229-45509248 None:intergenic 50.0%
!!! GGCCGCCTATTTTTACAGGT+TGG - chr4_1:45509465-45509484 None:intergenic 50.0%
TACTTTGTTGCAGTGGGGAG+TGG + chr4_1:45509800-45509819 Msa0550100:intron 50.0%
GCTAAAGGTCAGCCTCTTGA+AGG + chr4_1:45509856-45509875 Msa0550100:CDS 50.0%
AAAGGTCAGCCTCTTGAAGG+TGG + chr4_1:45509859-45509878 Msa0550100:CDS 50.0%
TGAAGACTGCCACCTTCAAG+AGG - chr4_1:45509871-45509890 None:intergenic 50.0%
GGAGGAAGAAGGGTGAACAA+GGG - chr4_1:45509921-45509940 None:intergenic 50.0%
AGGAGGAAGAAGGGTGAACA+AGG - chr4_1:45509922-45509941 None:intergenic 50.0%
TCCCGTAAATTGGGGAAAGG+AGG - chr4_1:45509939-45509958 None:intergenic 50.0%
!! AGGATTGGACTAGTGGTGAG+GGG - chr4_1:45510849-45510868 None:intergenic 50.0%
!! CTAGGATTGGACTAGTGGTG+AGG - chr4_1:45510851-45510870 None:intergenic 50.0%
CACCACTAGTCCAATCCTAG+TGG + chr4_1:45510851-45510870 Msa0550100:intron 50.0%
! AGCCACTAGGATTGGACTAG+TGG - chr4_1:45510856-45510875 None:intergenic 50.0%
ACTCCGTCTTGCTTCTACTC+AGG - chr4_1:45511172-45511191 None:intergenic 50.0%
AAGGAGAAGTGGGTCTACCT+TGG + chr4_1:45511214-45511233 Msa0550100:intron 50.0%
CTATCGGACAGCAGTTAGAC+CGG + chr4_1:45511424-45511443 Msa0550100:intron 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG + chr4_1:45511498-45511517 Msa0550100:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG + chr4_1:45511518-45511537 Msa0550100:intron 50.0%
CACCATTAGAGAGAGAGTGG+GGG + chr4_1:45511571-45511590 Msa0550100:intron 50.0%
TACCCCCACTCTCTCTCTAA+TGG - chr4_1:45511576-45511595 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr4_1:45511837-45511856 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr4_1:45506891-45506910 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr4_1:45506888-45506907 Msa0550100:intron 50.0%
GTTTCAGCGGGTATAGGATG+AGG + chr4_1:45511968-45511987 Msa0550100:intron 50.0%
GCGGGTATAGGATGAGGTTA+TGG + chr4_1:45511974-45511993 Msa0550100:intron 50.0%
ATGTTGTTGGGGCTGGAACA+AGG - chr4_1:45512348-45512367 None:intergenic 50.0%
TCACGAGCAGGATGTTGTTG+GGG - chr4_1:45512359-45512378 None:intergenic 50.0%
GTGTCATGTGAATCACGAGC+AGG - chr4_1:45512371-45512390 None:intergenic 50.0%
! CTGGTGGATATGAGTCTAGG+GGG + chr4_1:45512545-45512564 Msa0550100:CDS 50.0%
GGGAAGAAACAGCAGTTGTG+TGG - chr4_1:45512737-45512756 None:intergenic 50.0%
ACATACAAACCTGTGCCAGC+TGG - chr4_1:45512770-45512789 None:intergenic 50.0%
! TGCCTTTTCCTTGCATCCAC+AGG + chr4_1:45512968-45512987 Msa0550100:intron 50.0%
! GCCTTTTCCTTGCATCCACA+GGG + chr4_1:45512969-45512988 Msa0550100:intron 50.0%
TCCCTGTGGATGCAAGGAAA+AGG - chr4_1:45512973-45512992 None:intergenic 50.0%
CGAAAACGATCCACCTTCGA+TGG + chr4_1:45513234-45513253 Msa0550100:intron 50.0%
GGTTCAATGAGGGGTAACCT+TGG + chr4_1:45513340-45513359 Msa0550100:intron 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr4_1:45513360-45513379 None:intergenic 50.0%
! TCAGGCCTTGTATGTGATCG+AGG + chr4_1:45513605-45513624 Msa0550100:intron 50.0%
! TCTCTGGAGATACCTTCGGG+CGG - chr4_1:45506162-45506181 None:intergenic 55.0%
! ATGAGTTGGCGGAACCCACT+TGG + chr4_1:45506682-45506701 Msa0550100:intron 55.0%
! TGAGTTGGCGGAACCCACTT+GGG + chr4_1:45506683-45506702 Msa0550100:intron 55.0%
! GGAACCCACTTGGGTTGTTC+TGG + chr4_1:45506692-45506711 Msa0550100:intron 55.0%
! ACCCACTTGGGTTGTTCTGG+TGG + chr4_1:45506695-45506714 Msa0550100:intron 55.0%
CACCACCAGAACAACCCAAG+TGG - chr4_1:45506700-45506719 None:intergenic 55.0%
! TTCCCCGGTGCCAATTTAGG+TGG + chr4_1:45506770-45506789 Msa0550100:intron 55.0%
! TCCCCGGTGCCAATTTAGGT+GGG + chr4_1:45506771-45506790 Msa0550100:intron 55.0%
AGCCCACCTAAATTGGCACC+GGG - chr4_1:45506776-45506795 None:intergenic 55.0%
CATTGACAACCCCCTTCCCA+AGG - chr4_1:45507467-45507486 None:intergenic 55.0%
! TGGTTGTGTGGTGGAGCTAC+TGG - chr4_1:45508725-45508744 None:intergenic 55.0%
!! TCCACCGGTTTGTGGCACTT+TGG + chr4_1:45509034-45509053 Msa0550100:intron 55.0%
! TCCAAAGTGCCACAAACCGG+TGG - chr4_1:45509038-45509057 None:intergenic 55.0%
CGGTTTGTGGCACTTTGGAC+AGG + chr4_1:45509039-45509058 Msa0550100:intron 55.0%
CGTGTTTGATGTGGGAGCTC+TGG - chr4_1:45509123-45509142 None:intergenic 55.0%
CCCCCTGTTCGTGTTTGATG+TGG - chr4_1:45509132-45509151 None:intergenic 55.0%
TTCCCACAATGTGGCGTGCT+CGG + chr4_1:45509244-45509263 Msa0550100:intron 55.0%
CAAGCGTTAGCCGGATGACA+TGG - chr4_1:45509579-45509598 None:intergenic 55.0%
CTAGTGGTGAGGGGTTTGGA+TGG - chr4_1:45510840-45510859 None:intergenic 55.0%
!! TGGACTAGTGGTGAGGGGTT+TGG - chr4_1:45510844-45510863 None:intergenic 55.0%
TTTATTGGGGGGCAGGAGGA+GGG - chr4_1:45511003-45511022 None:intergenic 55.0%
ATTTATTGGGGGGCAGGAGG+AGG - chr4_1:45511004-45511023 None:intergenic 55.0%
GGAGGCTTTCAAGCAAGCAG+TGG + chr4_1:45511047-45511066 Msa0550100:intron 55.0%
CCGTCTTGCTTCTACTCAGG+CGG - chr4_1:45511169-45511188 None:intergenic 55.0%
CCGCCTGAGTAGAAGCAAGA+CGG + chr4_1:45511166-45511185 Msa0550100:intron 55.0%
GAGAAGTGGGTCTACCTTGG+AGG + chr4_1:45511217-45511236 Msa0550100:intron 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG + chr4_1:45511454-45511473 Msa0550100:intron 55.0%
CGGAGATGAGGATGTTGCGT+TGG + chr4_1:45511510-45511529 Msa0550100:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr4_1:45511829-45511848 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr4_1:45511828-45511847 Msa0550100:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr4_1:45511829-45511848 Msa0550100:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr4_1:45511835-45511854 Msa0550100:intron 55.0%
GAACGCCCGTGTTCTTCGAA+AGG + chr4_1:45512072-45512091 Msa0550100:intron 55.0%
TTCCCGGATGCTTTACCAGC+TGG + chr4_1:45512752-45512771 Msa0550100:CDS 55.0%
! TGCCAGCTGGTAAAGCATCC+GGG - chr4_1:45512757-45512776 None:intergenic 55.0%
! GTGCCAGCTGGTAAAGCATC+CGG - chr4_1:45512758-45512777 None:intergenic 55.0%
GATGCTTTACCAGCTGGCAC+AGG + chr4_1:45512758-45512777 Msa0550100:CDS 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr4_1:45513395-45513414 Msa0550100:intron 55.0%
CTAGAGCTCCCGCATATGCA+GGG - chr4_1:45513490-45513509 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG - chr4_1:45513491-45513510 None:intergenic 55.0%
ACCTGAAATGTTGCGGCCGA+TGG + chr4_1:45514033-45514052 Msa0550100:CDS 55.0%
CCTGAAATGTTGCGGCCGAT+GGG + chr4_1:45514034-45514053 Msa0550100:CDS 55.0%
CAGAGATCTCTTCGGCCACA+AGG + chr4_1:45514322-45514341 Msa0550100:CDS 55.0%
GCCGTCGCCGTTCTATTGTG+CGG + chr4_1:45505781-45505800 Msa0550100:five_prime_UTR 60.0%
GCCGCACAATAGAACGGCGA+CGG - chr4_1:45505785-45505804 None:intergenic 60.0%
GTCGCCGTTCTATTGTGCGG+CGG + chr4_1:45505784-45505803 Msa0550100:five_prime_UTR 60.0%
GCCCACCTAAATTGGCACCG+GGG - chr4_1:45506775-45506794 None:intergenic 60.0%
GTCCGAGCACGCCACATTGT+GGG - chr4_1:45509249-45509268 None:intergenic 60.0%
TGTCCGAGCACGCCACATTG+TGG - chr4_1:45509250-45509269 None:intergenic 60.0%
GAGCAGGATGTTGTTGGGGC+TGG - chr4_1:45512355-45512374 None:intergenic 60.0%
CAGTTGTGTGGGTCCGCAGA+AGG - chr4_1:45512725-45512744 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + chr4_1:45513349-45513368 Msa0550100:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr4_1:45513463-45513482 Msa0550100:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG - chr4_1:45513478-45513497 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr4_1:45513479-45513498 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr4_1:45513478-45513497 Msa0550100:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr4_1:45513479-45513498 Msa0550100:intron 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG + chr4_1:45513495-45513514 Msa0550100:intron 60.0%
CCCATCGGCCGCAACATTTC+AGG - chr4_1:45514037-45514056 None:intergenic 60.0%
CGGGAAGGGGTCCCACCATT+TGG - chr4_1:45513465-45513484 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG - chr4_1:45513480-45513499 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr4_1:45513484-45513503 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr4_1:45513485-45513504 None:intergenic 65.0%
! TGCGGGAGCTCTAGTGCACC+GGG + chr4_1:45513496-45513515 Msa0550100:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 45505699 45514829 45505699 ID=Msa0550100;Name=Msa0550100
chr4_1 mRNA 45505699 45514829 45505699 ID=Msa0550100-mRNA-1;Parent=Msa0550100;Name=Msa0550100-mRNA-1;_AED=0.14;_eAED=0.14;_QI=123|0.93|0.94|1|1|1|17|268|473
chr4_1 exon 45505699 45505968 45505699 ID=Msa0550100-mRNA-1:exon:11996;Parent=Msa0550100-mRNA-1
chr4_1 exon 45506069 45506191 45506069 ID=Msa0550100-mRNA-1:exon:11997;Parent=Msa0550100-mRNA-1
chr4_1 exon 45507008 45507100 45507008 ID=Msa0550100-mRNA-1:exon:11998;Parent=Msa0550100-mRNA-1
chr4_1 exon 45507307 45507363 45507307 ID=Msa0550100-mRNA-1:exon:11999;Parent=Msa0550100-mRNA-1
chr4_1 exon 45508255 45508310 45508255 ID=Msa0550100-mRNA-1:exon:12000;Parent=Msa0550100-mRNA-1
chr4_1 exon 45508425 45508517 45508425 ID=Msa0550100-mRNA-1:exon:12001;Parent=Msa0550100-mRNA-1
chr4_1 exon 45509813 45509896 45509813 ID=Msa0550100-mRNA-1:exon:12002;Parent=Msa0550100-mRNA-1
chr4_1 exon 45510676 45510714 45510676 ID=Msa0550100-mRNA-1:exon:12003;Parent=Msa0550100-mRNA-1
chr4_1 exon 45512328 45512404 45512328 ID=Msa0550100-mRNA-1:exon:12004;Parent=Msa0550100-mRNA-1
chr4_1 exon 45512482 45512566 45512482 ID=Msa0550100-mRNA-1:exon:12005;Parent=Msa0550100-mRNA-1
chr4_1 exon 45512683 45512779 45512683 ID=Msa0550100-mRNA-1:exon:12006;Parent=Msa0550100-mRNA-1
chr4_1 exon 45513072 45513168 45513072 ID=Msa0550100-mRNA-1:exon:12007;Parent=Msa0550100-mRNA-1
chr4_1 exon 45513609 45513680 45513609 ID=Msa0550100-mRNA-1:exon:12008;Parent=Msa0550100-mRNA-1
chr4_1 exon 45513820 45513886 45513820 ID=Msa0550100-mRNA-1:exon:12009;Parent=Msa0550100-mRNA-1
chr4_1 exon 45513979 45514104 45513979 ID=Msa0550100-mRNA-1:exon:12010;Parent=Msa0550100-mRNA-1
chr4_1 exon 45514289 45514343 45514289 ID=Msa0550100-mRNA-1:exon:12011;Parent=Msa0550100-mRNA-1
chr4_1 exon 45514508 45514829 45514508 ID=Msa0550100-mRNA-1:exon:12012;Parent=Msa0550100-mRNA-1
chr4_1 five_prime_UTR 45505699 45505821 45505699 ID=Msa0550100-mRNA-1:five_prime_utr;Parent=Msa0550100-mRNA-1
chr4_1 CDS 45505822 45505968 45505822 ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1
chr4_1 CDS 45506069 45506191 45506069 ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1
chr4_1 CDS 45507008 45507100 45507008 ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1
chr4_1 CDS 45507307 45507363 45507307 ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1
chr4_1 CDS 45508255 45508310 45508255 ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1
chr4_1 CDS 45508425 45508517 45508425 ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1
chr4_1 CDS 45509813 45509896 45509813 ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1
chr4_1 CDS 45510676 45510714 45510676 ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1
chr4_1 CDS 45512328 45512404 45512328 ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1
chr4_1 CDS 45512482 45512566 45512482 ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1
chr4_1 CDS 45512683 45512779 45512683 ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1
chr4_1 CDS 45513072 45513168 45513072 ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1
chr4_1 CDS 45513609 45513680 45513609 ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1
chr4_1 CDS 45513820 45513886 45513820 ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1
chr4_1 CDS 45513979 45514104 45513979 ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1
chr4_1 CDS 45514289 45514343 45514289 ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1
chr4_1 CDS 45514508 45514561 45514508 ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1
chr4_1 three_prime_UTR 45514562 45514829 45514562 ID=Msa0550100-mRNA-1:three_prime_utr;Parent=Msa0550100-mRNA-1
Gene Sequence

>Msa0550100

ATGGCAGAAGAAGCAGTTCTTGGTTACCTGCAAAACAACGATGAGATTAAAGATTCAGGTGAATTTGCAGCTGAACGTGGCATTGACCACAACGAAATCGTCAATGTCATCAAGAGTCTTCATGGTTTCAGATACGTCGATGCTGTGGATATTAAGAGGGAGACATGGGTGTTAACTGATGAAGGAAACACTTATGCTACTTTGGGATCCCCTGAATTTCAACTAATTTTGGCTATTCCGCCCGAAGGTATCTCCAGAGATGAACTTCAGAAAAAGCTGGGTCCTTCAGTCTTCAAGATAGCTTGTGCACAGGCTGCTAAGAATAAATGGGTGGAAATGGGAAAGCAACTCATATCTAGGAAGGTCCAAGATGTGGAAGATAGAGTCAAAAATCTGCTTCTTCAAATACAACAGGGACAGGGCATTGGTTCAGATGATATCAAAGCACTCAAAGCTAGAAAGCTTATTGTTCCACAGACATGGAAGGGTTACTCGGTGAAAAAGGGTCCTAACTATGCTCCAAAAAGAAAGAAGGTTGTCACTGATTTAACTCGAGATAACTTTCAGAGTGGGGAGTGGAAAGAAATAGAGTTCAAAGAGTACAACTACACTGCTAAAGGTCAGCCTCTTGAAGGTGGCAGTCTTCATCCACTGTTTGAGGAGATGCCCACAAATAATTATGTTGAAAGCAGTTTCTGGAATTTTGATTCCTTGTTCCAGCCCCAACAACATCCTGCTCGTGATTCACATGACACATTCTTTTTGGAAGCTCCTTCAACAACAAAGAAACTGCCTGAAGATTATGTTCAGCGGGTGAAGCAAATTCATGAATCTGGTGGATATGAGTCTAGGGGATATGCATATGACTGGAAAAGAGAGGAAGCAAATAAAAACCTTCTGCGGACCCACACAACTGCTGTTTCTTCCCGGATGCTTTACCAGCTGGCACAGAAACCATTTTCTCCAAAAAAATATTTCTCTATAGATCGTGTATTCCGAAATGAAGCAGTGGACCGTACACATCTTGCTGAGTTCCATCAGATAGAAGGCCTTGTATGTGATCGAGGACTCACTCTCTGTGACTTAATAGGAGTTCTACATGATTTCTTCTCACGCTTAGGCATGACCAAGCTGAAATTCAAACCTGCTTACAATCCATACACAGAACCTAGCATGGAGATTTTCAGTTATCATGAAGGCTTCAAAAAATGGGTAGAAGTAGGAAACTCTGGCATGTTCAGACCTGAAATGTTGCGGCCGATGGGACTTCCTGAAGATGTCCAAGTTATTGCATGGGGACTTTCTCTTGAAAGGCCAACAATGATAATGTATGGGATAGATAACATCAGAGATCTCTTCGGCCACAAGGTGGATCTTGGACTTATTAAGAAAAATTCAATATGTCGACTTGGAATTGAATGA

Protein sequence

>Msa0550100

MAEEAVLGYLQNNDEIKDSGEFAAERGIDHNEIVNVIKSLHGFRYVDAVDIKRETWVLTDEGNTYATLGSPEFQLILAIPPEGISRDELQKKLGPSVFKIACAQAAKNKWVEMGKQLISRKVQDVEDRVKNLLLQIQQGQGIGSDDIKALKARKLIVPQTWKGYSVKKGPNYAPKRKKVVTDLTRDNFQSGEWKEIEFKEYNYTAKGQPLEGGSLHPLFEEMPTNNYVESSFWNFDSLFQPQQHPARDSHDTFFLEAPSTTKKLPEDYVQRVKQIHESGGYESRGYAYDWKREEANKNLLRTHTTAVSSRMLYQLAQKPFSPKKYFSIDRVFRNEAVDRTHLAEFHQIEGLVCDRGLTLCDLIGVLHDFFSRLGMTKLKFKPAYNPYTEPSMEIFSYHEGFKKWVEVGNSGMFRPEMLRPMGLPEDVQVIAWGLSLERPTMIMYGIDNIRDLFGHKVDLGLIKKNSICRLGIE*