Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0550100 | AES89103.1 | 96.516 | 488 | 2 | 1 | 1 | 473 | 73 | 560 | 0.0 | 977 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0550100 | sp|Q9T034|SYFA_ARATH | 78.689 | 488 | 85 | 4 | 1 | 472 | 1 | 485 | 0.0 | 805 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0550100 | G7JG63 | 96.516 | 488 | 2 | 1 | 1 | 473 | 73 | 560 | 0.0 | 977 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0089540 | Msa0550100 | 0.822131 | 2.791621e-53 | -8.615850e-47 |
Msa0550100 | Msa0582070 | 0.812355 | 4.420757e-51 | -8.615850e-47 |
Msa0550100 | Msa0605610 | 0.933877 | 9.585250e-96 | -8.615850e-47 |
Msa0550100 | Msa0646560 | 0.915201 | 7.799318e-85 | -8.615850e-47 |
Msa0550100 | Msa0900830 | 0.819052 | 1.421711e-52 | -8.615850e-47 |
Msa0550100 | Msa0926240 | 0.836986 | 6.783608e-57 | -8.615850e-47 |
Msa0550100 | Msa0929700 | 0.802264 | 6.092634e-49 | -8.615850e-47 |
Msa0550100 | Msa0965800 | 0.862710 | 4.177989e-64 | -8.615850e-47 |
Msa0550100 | Msa1026710 | 0.813327 | 2.707338e-51 | -8.615850e-47 |
Msa0550100 | Msa1449160 | 0.811779 | 5.901674e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0550100 | MtrunA17_Chr4g0034971 | 96.516 | 488 | 2 | 1 | 1 | 473 | 73 | 560 | 0.0 | 977 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0550100 | AT4G39280.1 | 78.689 | 488 | 85 | 4 | 1 | 472 | 1 | 485 | 0.0 | 805 |
Msa0550100 | AT4G39280.2 | 78.689 | 488 | 85 | 4 | 1 | 472 | 1 | 485 | 0.0 | 804 |
Msa0550100 | AT3G58140.1 | 24.348 | 230 | 113 | 7 | 234 | 450 | 131 | 312 | 3.82e-11 | 65.5 |
Find 133 sgRNAs with CRISPR-Local
Find 688 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCTGAATTTCAACTAATTT+TGG | 0.096630 | 4_1:+45506131 | Msa0550100:CDS |
GCCAAAATTAGTTGAAATTC+AGG | 0.195550 | 4_1:-45506132 | None:intergenic |
TCTATTGTGCGGCGGTTCTT+AGG | 0.224374 | 4_1:+45505792 | Msa0550100:five_prime_UTR |
CCCATCGGCCGCAACATTTC+AGG | 0.247616 | 4_1:-45514034 | None:intergenic |
CCAAATGTATTGCTTGATAT+TGG | 0.248698 | 4_1:-45514612 | None:intergenic |
CACAGGCTGCTAAGAATAAA+TGG | 0.253144 | 4_1:+45507045 | Msa0550100:CDS |
TTATATCACCACTGTTATAA+AGG | 0.264608 | 4_1:-45514815 | None:intergenic |
GGGATTGTTCAATAGGTAAA+AGG | 0.264711 | 4_1:-45514794 | None:intergenic |
GAAGGGTTACTCGGTGAAAA+AGG | 0.272456 | 4_1:+45508431 | Msa0550100:CDS |
TAAGAATAAATGGGTGGAAA+TGG | 0.321478 | 4_1:+45507055 | Msa0550100:CDS |
TTATAAAGGGATTGTTCAAT+AGG | 0.338680 | 4_1:-45514801 | None:intergenic |
GGCAGTTTCTTTGTTGTTGA+AGG | 0.347853 | 4_1:-45512484 | None:intergenic |
ATCCCATACATTATCATTGT+TGG | 0.352476 | 4_1:-45514290 | None:intergenic |
GCAATAACTTGGACATCTTC+AGG | 0.352913 | 4_1:-45514061 | None:intergenic |
ACACAACTGCTGTTTCTTCC+CGG | 0.353252 | 4_1:+45512736 | Msa0550100:CDS |
AACAAATATATCAGACATAA+TGG | 0.358053 | 4_1:-45514568 | None:intergenic |
GGAAACACTTATGCTACTTT+GGG | 0.368488 | 4_1:+45506105 | Msa0550100:CDS |
AGGAAACACTTATGCTACTT+TGG | 0.372317 | 4_1:+45506104 | Msa0550100:CDS |
TGACTCTATCTTCCACATCT+TGG | 0.374666 | 4_1:-45507309 | None:intergenic |
AATGTCATCAAGAGTCTTCA+TGG | 0.375800 | 4_1:+45505924 | Msa0550100:CDS |
ATGGCAGAAGAAGCAGTTCT+TGG | 0.380478 | 4_1:+45505822 | Msa0550100:CDS |
TACGGTCCACTGCTTCATTT+CGG | 0.381127 | 4_1:-45513116 | None:intergenic |
TATATCACCACTGTTATAAA+GGG | 0.387936 | 4_1:-45514814 | None:intergenic |
CTCACTCTCTGTGACTTAAT+AGG | 0.389562 | 4_1:+45513629 | Msa0550100:CDS |
CCAATATCAAGCAATACATT+TGG | 0.391917 | 4_1:+45514612 | Msa0550100:three_prime_UTR |
AGGCCAACAATGATAATGTA+TGG | 0.396670 | 4_1:+45514287 | Msa0550100:intron |
AAGAATAAATGGGTGGAAAT+GGG | 0.403506 | 4_1:+45507056 | Msa0550100:CDS |
TCTGCTTCTTCAAATACAAC+AGG | 0.409658 | 4_1:+45507336 | Msa0550100:CDS |
GTGAAGCAAATTCATGAATC+TGG | 0.409753 | 4_1:+45512526 | Msa0550100:CDS |
AACGATGAGATTAAAGATTC+AGG | 0.411017 | 4_1:+45505858 | Msa0550100:CDS |
CATGGGGACTTTCTCTTGAA+AGG | 0.415287 | 4_1:+45514083 | Msa0550100:CDS |
TATCTCCAGAGATGAACTTC+AGG | 0.416797 | 4_1:+45506170 | Msa0550100:CDS |
TTCATCTCTGGAGATACCTT+CGG | 0.418177 | 4_1:-45506163 | None:intergenic |
GCTGAGTTCCATCAGATAGA+AGG | 0.424934 | 4_1:+45513147 | Msa0550100:CDS |
TACTTTGTTGCAGTGGGGAG+TGG | 0.425940 | 4_1:+45509800 | Msa0550100:intron |
ATCACGAGCAGGATGTTGTT+GGG | 0.429335 | 4_1:-45512357 | None:intergenic |
GTGCCAGCTGGTAAAGCATC+CGG | 0.436309 | 4_1:-45512755 | None:intergenic |
ACCTGAAATGTTGCGGCCGA+TGG | 0.441480 | 4_1:+45514033 | Msa0550100:CDS |
GCTTTCAACATAATTATTTG+TGG | 0.443741 | 4_1:-45510690 | None:intergenic |
TTCCCCTTTGCAATTTCTGT+TGG | 0.447295 | 4_1:+45514720 | Msa0550100:three_prime_UTR |
TTCCCGGATGCTTTACCAGC+TGG | 0.449839 | 4_1:+45512752 | Msa0550100:CDS |
CATGATTTCTTCTCACGCTT+AGG | 0.453055 | 4_1:+45513659 | Msa0550100:CDS |
CTTTCAACATAATTATTTGT+GGG | 0.453083 | 4_1:-45510689 | None:intergenic |
AACTACCTGAAGTTCATCTC+TGG | 0.454281 | 4_1:-45506175 | None:intergenic |
CCAAAATTAGTTGAAATTCA+GGG | 0.454614 | 4_1:-45506131 | None:intergenic |
TCCATGCTAGGTTCTGTGTA+TGG | 0.455200 | 4_1:-45513855 | None:intergenic |
CGTGGATATAGGATATTAAG+AGG | 0.457838 | 4_1:+45506058 | Msa0550100:intron |
TGGGAAAGCAACTCATATCT+AGG | 0.457897 | 4_1:+45507075 | Msa0550100:CDS |
TATCTAATGCTGCAGGTTTG+AGG | 0.459179 | 4_1:+45510661 | Msa0550100:intron |
GCTAAAGGTCAGCCTCTTGA+AGG | 0.483989 | 4_1:+45509856 | Msa0550100:CDS |
AAAGTCCCCATGCAATAACT+TGG | 0.488007 | 4_1:-45514072 | None:intergenic |
ACCCGCTGAACATAATCTTC+AGG | 0.489399 | 4_1:-45512505 | None:intergenic |
TCTGTGTATGGATTGTAAGC+AGG | 0.492584 | 4_1:-45513843 | None:intergenic |
GCGAACAGAAATGTGAAGAT+AGG | 0.497269 | 4_1:-45505760 | None:intergenic |
GAGTACAACTACACTGCTAA+AGG | 0.503823 | 4_1:+45509841 | Msa0550100:CDS |
CTCACGTACCTTCTATCTGA+TGG | 0.507401 | 4_1:-45513155 | None:intergenic |
TCATCTCTGGAGATACCTTC+GGG | 0.514328 | 4_1:-45506162 | None:intergenic |
TGGGTAGAAGTAGGAAACTC+TGG | 0.514681 | 4_1:+45514001 | Msa0550100:CDS |
CCTGAAATGTTGCGGCCGAT+GGG | 0.514857 | 4_1:+45514034 | Msa0550100:CDS |
ATCTGGTGGATATGAGTCTA+GGG | 0.518465 | 4_1:+45512543 | Msa0550100:CDS |
TTGGTAGATATGCATATGAC+TGG | 0.519858 | 4_1:+45512676 | Msa0550100:intron |
GAGCAGGATGTTGTTGGGGC+TGG | 0.519969 | 4_1:-45512352 | None:intergenic |
GCCTGAAGATTATGTTCAGC+GGG | 0.522388 | 4_1:+45512504 | Msa0550100:CDS |
AATCTGGTGGATATGAGTCT+AGG | 0.523310 | 4_1:+45512542 | Msa0550100:CDS |
GCGGTTCTTAGGTTTGAGAA+TGG | 0.524236 | 4_1:+45505803 | Msa0550100:exon |
ACATGGGTGTTAACTGATGA+AGG | 0.528044 | 4_1:+45506084 | Msa0550100:CDS |
CAAATAATTATGTTGAAAGC+AGG | 0.529786 | 4_1:+45510693 | Msa0550100:CDS |
TTTATAATCTAGGACATGGA+AGG | 0.529872 | 4_1:+45508413 | Msa0550100:intron |
AGCAGGTTTGAATTTCAGCT+TGG | 0.531031 | 4_1:-45513826 | None:intergenic |
ATATTGCAAATGCAGGGCAT+TGG | 0.535921 | 4_1:+45508240 | Msa0550100:intron |
AAACCAACAGAAATTGCAAA+GGG | 0.538353 | 4_1:-45514723 | None:intergenic |
CAGTTGTGTGGGTCCGCAGA+AGG | 0.541428 | 4_1:-45512722 | None:intergenic |
TAGAGAAATATTTATGACAT+GGG | 0.544237 | 4_1:+45514692 | Msa0550100:three_prime_UTR |
AATCACGAGCAGGATGTTGT+TGG | 0.550429 | 4_1:-45512358 | None:intergenic |
TTATAATCTAGGACATGGAA+GGG | 0.551939 | 4_1:+45508414 | Msa0550100:intron |
AAGATGTCCAAGTTATTGCA+TGG | 0.554823 | 4_1:+45514065 | Msa0550100:CDS |
GATGCTTTACCAGCTGGCAC+AGG | 0.556280 | 4_1:+45512758 | Msa0550100:CDS |
TCTTCAAATACAACAGGGAC+AGG | 0.557365 | 4_1:+45507342 | Msa0550100:CDS |
AGGATATTAAGAGGGAGACA+TGG | 0.561811 | 4_1:+45506067 | Msa0550100:intron |
ACAGGCTGCTAAGAATAAAT+GGG | 0.564845 | 4_1:+45507046 | Msa0550100:CDS |
CAAAATTAGTTGAAATTCAG+GGG | 0.565317 | 4_1:-45506130 | None:intergenic |
CTTCAAGATAGCTTGTGCAC+AGG | 0.567618 | 4_1:+45507028 | Msa0550100:CDS |
ATGTTGTTGGGGCTGGAACA+AGG | 0.568157 | 4_1:-45512345 | None:intergenic |
TGCCAGCTGGTAAAGCATCC+GGG | 0.570368 | 4_1:-45512754 | None:intergenic |
GGCCAACAATGATAATGTAT+GGG | 0.574828 | 4_1:+45514288 | Msa0550100:intron |
CTGGTTGAAGGTCCAAGATG+TGG | 0.575608 | 4_1:+45507297 | Msa0550100:intron |
CAGAGATCTCTTCGGCCACA+AGG | 0.576224 | 4_1:+45514322 | Msa0550100:CDS |
GATAACATCAGAGATCTCTT+CGG | 0.577235 | 4_1:+45514314 | Msa0550100:CDS |
TGAGTCCTCGATCACATACA+AGG | 0.577373 | 4_1:-45513610 | None:intergenic |
ACATACAAACCTGTGCCAGC+TGG | 0.581794 | 4_1:-45512767 | None:intergenic |
AAGCAAATTCATGAATCTGG+TGG | 0.584637 | 4_1:+45512529 | Msa0550100:CDS |
GGGAAGAAACAGCAGTTGTG+TGG | 0.585320 | 4_1:-45512734 | None:intergenic |
AGATGTCCAAGTTATTGCAT+GGG | 0.585697 | 4_1:+45514066 | Msa0550100:CDS |
GGATATTAAGAGGGAGACAT+GGG | 0.586886 | 4_1:+45506068 | Msa0550100:intron |
TCCATACACAGAACCTAGCA+TGG | 0.588226 | 4_1:+45513854 | Msa0550100:CDS |
TAGGACATGGAAGGGTTACT+CGG | 0.591543 | 4_1:+45508422 | Msa0550100:intron |
AAAGCAACTCATATCTAGGA+AGG | 0.600368 | 4_1:+45507079 | Msa0550100:CDS |
GGAACTCAGCAAGATGTGTA+CGG | 0.600616 | 4_1:-45513134 | None:intergenic |
CAAGCTATCTTGAAGACTGA+AGG | 0.601060 | 4_1:-45507020 | None:intergenic |
GCCGCACAATAGAACGGCGA+CGG | 0.602780 | 4_1:-45505782 | None:intergenic |
TGAAGACTGCCACCTTCAAG+AGG | 0.603906 | 4_1:-45509868 | None:intergenic |
AACAGAAATGTGAAGATAGG+TGG | 0.605431 | 4_1:-45505757 | None:intergenic |
GTAGAGAAATATTTATGACA+TGG | 0.607873 | 4_1:+45514691 | Msa0550100:three_prime_UTR |
TCGTATAACAGTTATCATGA+AGG | 0.610125 | 4_1:+45513968 | Msa0550100:intron |
CACCTGAAAATCTCCATGCT+AGG | 0.612290 | 4_1:-45513867 | None:intergenic |
TAACTCGAGATAACTTTCAG+AGG | 0.616702 | 4_1:+45508496 | Msa0550100:CDS |
GCCGTCGCCGTTCTATTGTG+CGG | 0.616946 | 4_1:+45505781 | Msa0550100:five_prime_UTR |
TCAGGCCTTGTATGTGATCG+AGG | 0.620832 | 4_1:+45513605 | Msa0550100:intron |
TGTTCAGACCTGAAATGTTG+CGG | 0.621149 | 4_1:+45514026 | Msa0550100:CDS |
GGAAGAAACAGCAGTTGTGT+GGG | 0.622693 | 4_1:-45512733 | None:intergenic |
GTGTCATGTGAATCACGAGC+AGG | 0.626400 | 4_1:-45512368 | None:intergenic |
GGTGAATTTGCAGCTGAACG+TGG | 0.628430 | 4_1:+45505879 | Msa0550100:CDS |
CAAACCAACAGAAATTGCAA+AGG | 0.633270 | 4_1:-45514724 | None:intergenic |
AAAGGTCAGCCTCTTGAAGG+TGG | 0.635059 | 4_1:+45509859 | Msa0550100:CDS |
TGCATATGACTGGAAAAGAG+AGG | 0.636420 | 4_1:+45512686 | Msa0550100:CDS |
GAACAATCCCTTTATAACAG+TGG | 0.642484 | 4_1:+45514807 | Msa0550100:three_prime_UTR |
GGCTGCTAAGAATAAATGGG+TGG | 0.644736 | 4_1:+45507049 | Msa0550100:CDS |
ACATCTTCAGGAAGTCCCAT+CGG | 0.645307 | 4_1:-45514049 | None:intergenic |
TCACGAGCAGGATGTTGTTG+GGG | 0.645590 | 4_1:-45512356 | None:intergenic |
AGAACCGCCGCACAATAGAA+CGG | 0.646809 | 4_1:-45505788 | None:intergenic |
CTGCTTCTTCAAATACAACA+GGG | 0.647717 | 4_1:+45507337 | Msa0550100:CDS |
GTCGCCGTTCTATTGTGCGG+CGG | 0.649096 | 4_1:+45505784 | Msa0550100:five_prime_UTR |
GATGTCCAAGTTATTGCATG+GGG | 0.652254 | 4_1:+45514067 | Msa0550100:CDS |
TGCCTGAAGATTATGTTCAG+CGG | 0.652900 | 4_1:+45512503 | Msa0550100:CDS |
CGACTTGGAATTGAATGAAG+TGG | 0.657604 | 4_1:+45514544 | Msa0550100:exon |
GTGGATATAGGATATTAAGA+GGG | 0.659435 | 4_1:+45506059 | Msa0550100:intron |
CTGGTGGATATGAGTCTAGG+GGG | 0.660548 | 4_1:+45512545 | Msa0550100:CDS |
TTTCAGATACGTCGATGCTG+TGG | 0.662586 | 4_1:+45505947 | Msa0550100:CDS |
TGACATTGACGATTTCGTTG+TGG | 0.667924 | 4_1:-45505908 | None:intergenic |
TGTATTCCGAAATGAAGCAG+TGG | 0.678250 | 4_1:+45513110 | Msa0550100:CDS |
TCTGGTGGATATGAGTCTAG+GGG | 0.691706 | 4_1:+45512544 | Msa0550100:CDS |
TCTCTGGAGATACCTTCGGG+CGG | 0.738824 | 4_1:-45506159 | None:intergenic |
AACCAACAGAAATTGCAAAG+GGG | 0.744711 | 4_1:-45514722 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAATAAATAAAAAAAT+AGG | + | chr4_1:45509553-45509572 | Msa0550100:intron | 0.0% |
!!! | ATAAAATGTCAATTTAATTT+TGG | - | chr4_1:45505994-45506013 | None:intergenic | 10.0% |
!!! | TAATTTTCTCAAGTTAATAA+CGG | + | chr4_1:45506451-45506470 | Msa0550100:intron | 15.0% |
!!! | CATTTTTTTTTCTTTCTTAA+AGG | - | chr4_1:45506805-45506824 | None:intergenic | 15.0% |
!!! | TTGAATCTAATTGTTTTTTA+TGG | + | chr4_1:45506979-45506998 | Msa0550100:intron | 15.0% |
!! | TAATGTTCTATTAAAATTGA+GGG | + | chr4_1:45507488-45507507 | Msa0550100:intron | 15.0% |
!! | ATGAAATAATTTATGTTTCT+TGG | - | chr4_1:45508900-45508919 | None:intergenic | 15.0% |
!! | AAGAAACATAAATTATTTCA+TGG | + | chr4_1:45508899-45508918 | Msa0550100:intron | 15.0% |
!!! | AATTTGAAAAAGTTTTATGT+AGG | - | chr4_1:45510294-45510313 | None:intergenic | 15.0% |
!! | TTAGATGTAAAGAATAATAA+TGG | + | chr4_1:45510935-45510954 | Msa0550100:intron | 15.0% |
!!! | ATCATTCAAATAAAAGATTT+TGG | - | chr4_1:45512005-45512024 | None:intergenic | 15.0% |
!!! | AAAATCTTTTATTTGAATGA+TGG | + | chr4_1:45512004-45512023 | Msa0550100:intron | 15.0% |
!!! | AAATATTTTTTTGGAGAAAA+TGG | - | chr4_1:45513078-45513097 | None:intergenic | 15.0% |
!!! | TCTATAGAGAAATATTTTTT+TGG | - | chr4_1:45513087-45513106 | None:intergenic | 15.0% |
!!! | AAATTAATTCATTTTACTGT+TGG | - | chr4_1:45514145-45514164 | None:intergenic | 15.0% |
!!! | TTTTTTTTGTTGTCTTTTTA+AGG | + | chr4_1:45514392-45514411 | Msa0550100:intron | 15.0% |
!!! | TTTTTTTGTTGTCTTTTTAA+GGG | + | chr4_1:45514393-45514412 | Msa0550100:intron | 15.0% |
!! | TACTACTAAATAATGTATTG+CGG | - | chr4_1:45506345-45506364 | None:intergenic | 20.0% |
!! | TACAAAATATTGTGAAATAG+TGG | + | chr4_1:45506363-45506382 | Msa0550100:intron | 20.0% |
!! | AGAAAGAAAAAAAAATGAGT+TGG | + | chr4_1:45506808-45506827 | Msa0550100:intron | 20.0% |
!!! | ATTCTAAATCTACTACTTTT+GGG | + | chr4_1:45507112-45507131 | Msa0550100:intron | 20.0% |
!! | CTAATGTTCTATTAAAATTG+AGG | + | chr4_1:45507487-45507506 | Msa0550100:intron | 20.0% |
!! | AATGTTCTATTAAAATTGAG+GGG | + | chr4_1:45507489-45507508 | Msa0550100:intron | 20.0% |
!! | AATCAGATAATAATAGATAG+TGG | + | chr4_1:45507550-45507569 | Msa0550100:intron | 20.0% |
!! | GTTTCCATATAATTAACATA+AGG | - | chr4_1:45508142-45508161 | None:intergenic | 20.0% |
!!! | ATATTTTATAATCTAGGACA+TGG | + | chr4_1:45508409-45508428 | Msa0550100:intron | 20.0% |
!! | AAAATGGGAAAAATTATTAC+TGG | + | chr4_1:45508754-45508773 | Msa0550100:intron | 20.0% |
!! | TTGTTGTATGTATCATAATA+TGG | - | chr4_1:45508807-45508826 | None:intergenic | 20.0% |
!! | TGGAAAAATTACATTAACTT+TGG | - | chr4_1:45509486-45509505 | None:intergenic | 20.0% |
!!! | GATGTATTTTTTTATGATAC+AGG | - | chr4_1:45510222-45510241 | None:intergenic | 20.0% |
!!! | TTATTTGATGTTCACTTTTT+TGG | - | chr4_1:45510408-45510427 | None:intergenic | 20.0% |
!! | CTTTCAACATAATTATTTGT+GGG | - | chr4_1:45510692-45510711 | None:intergenic | 20.0% |
!! | TTCTACTAAGGATTTATTAA+AGG | - | chr4_1:45511107-45511126 | None:intergenic | 20.0% |
!!! | GAATCCCAAATTTTTTAATA+TGG | + | chr4_1:45511140-45511159 | Msa0550100:intron | 20.0% |
!! | GAAGCCATATTAAAAAATTT+GGG | - | chr4_1:45511147-45511166 | None:intergenic | 20.0% |
!! | TCTTGCTTATTTATGTTATT+TGG | + | chr4_1:45512202-45512221 | Msa0550100:intron | 20.0% |
!!! | CTTGCTTATTTATGTTATTT+GGG | + | chr4_1:45512203-45512222 | Msa0550100:intron | 20.0% |
!!! | TTGCTTATTTATGTTATTTG+GGG | + | chr4_1:45512204-45512223 | Msa0550100:intron | 20.0% |
!!! | TTACATCTTAATGCTTTAAA+TGG | + | chr4_1:45512302-45512321 | Msa0550100:intron | 20.0% |
!! | GAAAGAAAAATGAAGATAAT+AGG | - | chr4_1:45512859-45512878 | None:intergenic | 20.0% |
!! | GTGGAAAAAAAAATCATAAT+TGG | - | chr4_1:45513261-45513280 | None:intergenic | 20.0% |
!! | TTGAACCATAAAAGTAAAAA+GGG | - | chr4_1:45513525-45513544 | None:intergenic | 20.0% |
!! | ATTGAACCATAAAAGTAAAA+AGG | - | chr4_1:45513526-45513545 | None:intergenic | 20.0% |
!! | AACAAATTTAGTGAATGTAT+CGG | + | chr4_1:45514195-45514214 | Msa0550100:intron | 20.0% |
!!! | TTGTTATTTTTCCTAAAAAC+AGG | + | chr4_1:45514267-45514286 | Msa0550100:intron | 20.0% |
!! | TGAATAAATCACTGTTTATT+TGG | + | chr4_1:45514366-45514385 | Msa0550100:intron | 20.0% |
!! | GAATAAATCACTGTTTATTT+GGG | + | chr4_1:45514367-45514386 | Msa0550100:intron | 20.0% |
!! | AAAAAAACATGGAAAATACA+TGG | - | chr4_1:45514484-45514503 | None:intergenic | 20.0% |
!! | AACAAATATATCAGACATAA+TGG | - | chr4_1:45514571-45514590 | None:intergenic | 20.0% |
!! | TAGAGAAATATTTATGACAT+GGG | + | chr4_1:45514692-45514711 | Msa0550100:three_prime_UTR | 20.0% |
! | TAAATCGTTTGTGACAAATT+TGG | + | chr4_1:45506025-45506044 | Msa0550100:intron | 25.0% |
! | CAAAATTAGTTGAAATTCAG+GGG | - | chr4_1:45506133-45506152 | None:intergenic | 25.0% |
! | CCAAAATTAGTTGAAATTCA+GGG | - | chr4_1:45506134-45506153 | None:intergenic | 25.0% |
! | TCAGATTAAATGTATGTGTT+CGG | + | chr4_1:45506252-45506271 | Msa0550100:intron | 25.0% |
!! | GATTCTAAATCTACTACTTT+TGG | + | chr4_1:45507111-45507130 | Msa0550100:intron | 25.0% |
! | ACTTATCATAAACCAATTTC+TGG | + | chr4_1:45507278-45507297 | Msa0550100:intron | 25.0% |
!!! | AAGTTCTTTTTTCTTTCCTT+GGG | + | chr4_1:45507448-45507467 | Msa0550100:intron | 25.0% |
! | ATGTTCTATTAAAATTGAGG+GGG | + | chr4_1:45507490-45507509 | Msa0550100:intron | 25.0% |
! | TAAAACATGGATTTCAAAGA+AGG | - | chr4_1:45507845-45507864 | None:intergenic | 25.0% |
!!! | ATATGCTTATCTCTAAAACA+TGG | - | chr4_1:45507858-45507877 | None:intergenic | 25.0% |
!!! | TGTTTTAGAGATAAGCATAT+AGG | + | chr4_1:45507858-45507877 | Msa0550100:intron | 25.0% |
!! | TTTGGTTTATTGTATTACGT+TGG | + | chr4_1:45507895-45507914 | Msa0550100:intron | 25.0% |
! | TTCAACTAAATATGTGAGAT+AGG | + | chr4_1:45507950-45507969 | Msa0550100:intron | 25.0% |
! | TAAATATGTGAGATAGGTAT+AGG | + | chr4_1:45507956-45507975 | Msa0550100:intron | 25.0% |
! | TAAGTCATAACTAAAGAGAA+TGG | - | chr4_1:45508009-45508028 | None:intergenic | 25.0% |
! | TCCTCCTTATGTTAATTATA+TGG | + | chr4_1:45508135-45508154 | Msa0550100:intron | 25.0% |
! | TCCATATAATTAACATAAGG+AGG | - | chr4_1:45508139-45508158 | None:intergenic | 25.0% |
! | AAATGAAATGGTTATTACTG+TGG | - | chr4_1:45508309-45508328 | None:intergenic | 25.0% |
! | TGAAGAACAATCAAATGAAA+TGG | - | chr4_1:45508321-45508340 | None:intergenic | 25.0% |
! | TATGTATCATAATATGGATC+AGG | - | chr4_1:45508801-45508820 | None:intergenic | 25.0% |
! | TGAGAATATATAATGCAAGA+AGG | + | chr4_1:45508951-45508970 | Msa0550100:intron | 25.0% |
! | ATGAATCAGAAACTGTTAAT+TGG | - | chr4_1:45509084-45509103 | None:intergenic | 25.0% |
! | AAGACAATAAGAGAGTTAAA+TGG | - | chr4_1:45509273-45509292 | None:intergenic | 25.0% |
! | AAGATTCATATAACCAATCA+AGG | - | chr4_1:45509606-45509625 | None:intergenic | 25.0% |
! | CAATAGGAAAATTCATATTC+TGG | + | chr4_1:45509969-45509988 | Msa0550100:intron | 25.0% |
! | AATAAAGCATATACGATATG+TGG | + | chr4_1:45510080-45510099 | Msa0550100:intron | 25.0% |
! | ATATTGGACAGTATACATAT+AGG | - | chr4_1:45510111-45510130 | None:intergenic | 25.0% |
! | GCATAATTTCCTAAACATAT+TGG | - | chr4_1:45510127-45510146 | None:intergenic | 25.0% |
!!! | TAGGAAATTATGCGTTTTTT+TGG | + | chr4_1:45510134-45510153 | Msa0550100:intron | 25.0% |
!!! | TTTTTGGTAGTTTCTATATG+TGG | + | chr4_1:45510150-45510169 | Msa0550100:intron | 25.0% |
! | ATTTGTATGATGTGAACTTA+TGG | + | chr4_1:45510311-45510330 | Msa0550100:intron | 25.0% |
! | ACACAATGATCAAATATGTT+CGG | - | chr4_1:45510483-45510502 | None:intergenic | 25.0% |
! | CATTGTGTATTTAATAGATC+TGG | + | chr4_1:45510495-45510514 | Msa0550100:intron | 25.0% |
!!! | CATTTTTCCATTTTTAGGTA+CGG | + | chr4_1:45510519-45510538 | Msa0550100:intron | 25.0% |
!!! | ATTTTTCCATTTTTAGGTAC+GGG | + | chr4_1:45510520-45510539 | Msa0550100:intron | 25.0% |
! | TTACAAAATGTCAATCTCAA+AGG | - | chr4_1:45510637-45510656 | None:intergenic | 25.0% |
!! | TTGAGATTGACATTTTGTAA+TGG | + | chr4_1:45510637-45510656 | Msa0550100:intron | 25.0% |
! | GCTTTCAACATAATTATTTG+TGG | - | chr4_1:45510693-45510712 | None:intergenic | 25.0% |
! | CAAATAATTATGTTGAAAGC+AGG | + | chr4_1:45510693-45510712 | Msa0550100:CDS | 25.0% |
!! | AGTTTGATTTATTTATTGGG+GGG | - | chr4_1:45511014-45511033 | None:intergenic | 25.0% |
!! | GAGTTTGATTTATTTATTGG+GGG | - | chr4_1:45511015-45511034 | None:intergenic | 25.0% |
!! | CGAGTTTGATTTATTTATTG+GGG | - | chr4_1:45511016-45511035 | None:intergenic | 25.0% |
!! | CCGAGTTTGATTTATTTATT+GGG | - | chr4_1:45511017-45511036 | None:intergenic | 25.0% |
! | CCCAATAAATAAATCAAACT+CGG | + | chr4_1:45511014-45511033 | Msa0550100:intron | 25.0% |
! | CAGTGGAAAAATAAAATGTT+TGG | + | chr4_1:45511064-45511083 | Msa0550100:intron | 25.0% |
! | GGAAGCCATATTAAAAAATT+TGG | - | chr4_1:45511148-45511167 | None:intergenic | 25.0% |
!!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr4_1:45511606-45511625 | Msa0550100:intron | 25.0% |
! | TTGATCTATTCTTCTTACAA+CGG | - | chr4_1:45511672-45511691 | None:intergenic | 25.0% |
! | TGTAAGAAGAATAGATCAAA+TGG | + | chr4_1:45511673-45511692 | Msa0550100:intron | 25.0% |
! | GTTCTATCAAAAACCATATT+TGG | - | chr4_1:45511788-45511807 | None:intergenic | 25.0% |
!! | GATTCGGCTTTTATAATTTA+GGG | - | chr4_1:45511909-45511928 | None:intergenic | 25.0% |
! | TAACCTTACAATTTATTCCT+TGG | + | chr4_1:45512657-45512676 | Msa0550100:intron | 25.0% |
! | TGGTTTCTGCAAAATTATAA+TGG | - | chr4_1:45513058-45513077 | None:intergenic | 25.0% |
! | TGAATTGAAATGGAAAATCA+CGG | - | chr4_1:45513588-45513607 | None:intergenic | 25.0% |
! | ATGAGTTAAATGTTGAATGT+AGG | + | chr4_1:45513714-45513733 | Msa0550100:intron | 25.0% |
! | AAAATTTCTTTGTTGAGTTC+AGG | + | chr4_1:45513798-45513817 | Msa0550100:intron | 25.0% |
! | TGATTAACATGTAATCTCTT+GGG | - | chr4_1:45513943-45513962 | None:intergenic | 25.0% |
! | ACAAATTTAGTGAATGTATC+GGG | + | chr4_1:45514196-45514215 | Msa0550100:intron | 25.0% |
!!! | TATTTTCCATGTTTTTTTGC+AGG | + | chr4_1:45514486-45514505 | Msa0550100:intron | 25.0% |
!! | AAAAATTCAATATGTCGACT+TGG | + | chr4_1:45514529-45514548 | Msa0550100:CDS | 25.0% |
!! | TGGTAATAGCATTTTTCATT+TGG | + | chr4_1:45514669-45514688 | Msa0550100:three_prime_UTR | 25.0% |
! | GTAGAGAAATATTTATGACA+TGG | + | chr4_1:45514691-45514710 | Msa0550100:three_prime_UTR | 25.0% |
! | TTATAAAGGGATTGTTCAAT+AGG | - | chr4_1:45514804-45514823 | None:intergenic | 25.0% |
AACGATGAGATTAAAGATTC+AGG | + | chr4_1:45505858-45505877 | Msa0550100:CDS | 30.0% | |
GTGGATATAGGATATTAAGA+GGG | + | chr4_1:45506059-45506078 | Msa0550100:intron | 30.0% | |
! | CCCTGAATTTCAACTAATTT+TGG | + | chr4_1:45506131-45506150 | Msa0550100:CDS | 30.0% |
GCCAAAATTAGTTGAAATTC+AGG | - | chr4_1:45506135-45506154 | None:intergenic | 30.0% | |
AAGCTTCAATAGTAGAAAAG+GGG | - | chr4_1:45506233-45506252 | None:intergenic | 30.0% | |
GAAGCTTCAATAGTAGAAAA+GGG | - | chr4_1:45506234-45506253 | None:intergenic | 30.0% | |
TGAAGCTTCAATAGTAGAAA+AGG | - | chr4_1:45506235-45506254 | None:intergenic | 30.0% | |
TTGTGAAATAGTGGTTATAG+TGG | + | chr4_1:45506372-45506391 | Msa0550100:intron | 30.0% | |
AAGATGGTAGAAAATAGACT+TGG | + | chr4_1:45506519-45506538 | Msa0550100:intron | 30.0% | |
AGATGGTAGAAAATAGACTT+GGG | + | chr4_1:45506520-45506539 | Msa0550100:intron | 30.0% | |
GATTCAAATCATTAGAGGTA+GGG | + | chr4_1:45506608-45506627 | Msa0550100:intron | 30.0% | |
ATTCAAATCATTAGAGGTAG+GGG | + | chr4_1:45506609-45506628 | Msa0550100:intron | 30.0% | |
! | GTTTCTCTTGTAGTTTTTCT+AGG | - | chr4_1:45506639-45506658 | None:intergenic | 30.0% |
TACAAGAGAAACTGTTATGA+AGG | + | chr4_1:45506647-45506666 | Msa0550100:intron | 30.0% | |
!! | TGGTTTTTGAAAGAACACTA+TGG | + | chr4_1:45506840-45506859 | Msa0550100:intron | 30.0% |
GTTACAGTTAGTATTGTATC+TGG | + | chr4_1:45506926-45506945 | Msa0550100:intron | 30.0% | |
TAAGAATAAATGGGTGGAAA+TGG | + | chr4_1:45507055-45507074 | Msa0550100:CDS | 30.0% | |
AAGAATAAATGGGTGGAAAT+GGG | + | chr4_1:45507056-45507075 | Msa0550100:CDS | 30.0% | |
TTGAGATGAGAATTACTTCA+TGG | + | chr4_1:45507245-45507264 | Msa0550100:intron | 30.0% | |
!! | ATAAACCAATTTCTGGTTGA+AGG | + | chr4_1:45507285-45507304 | Msa0550100:intron | 30.0% |
TAATTGTGTTGAAACTTGAG+AGG | + | chr4_1:45507405-45507424 | Msa0550100:intron | 30.0% | |
AATTGTGTTGAAACTTGAGA+GGG | + | chr4_1:45507406-45507425 | Msa0550100:intron | 30.0% | |
!!! | GAAGTTCTTTTTTCTTTCCT+TGG | + | chr4_1:45507447-45507466 | Msa0550100:intron | 30.0% |
!! | ACAACTCTGAAGTATAAGAA+TGG | - | chr4_1:45507739-45507758 | None:intergenic | 30.0% |
TCATAACTAAAGAGAATGGA+AGG | - | chr4_1:45508005-45508024 | None:intergenic | 30.0% | |
CTCTTTAGTTATGACTTATG+AGG | + | chr4_1:45508011-45508030 | Msa0550100:intron | 30.0% | |
! | TTTATAATCTAGGACATGGA+AGG | + | chr4_1:45508413-45508432 | Msa0550100:intron | 30.0% |
! | TTATAATCTAGGACATGGAA+GGG | + | chr4_1:45508414-45508433 | Msa0550100:intron | 30.0% |
!!! | TTTCTTTTTGGAGCATAGTT+AGG | - | chr4_1:45508459-45508478 | None:intergenic | 30.0% |
TCCTTAAACTGAATGTAGAT+TGG | + | chr4_1:45508530-45508549 | Msa0550100:intron | 30.0% | |
CCTTAAACTGAATGTAGATT+GGG | + | chr4_1:45508531-45508550 | Msa0550100:intron | 30.0% | |
CTTAAACTGAATGTAGATTG+GGG | + | chr4_1:45508532-45508551 | Msa0550100:intron | 30.0% | |
! | TCATGGAAAAGTATAATGAC+CGG | + | chr4_1:45508916-45508935 | Msa0550100:intron | 30.0% |
! | AATTTGGTTAGCTGTATTTG+CGG | - | chr4_1:45508998-45509017 | None:intergenic | 30.0% |
GAAAAATGGTGGTTGTAATT+TGG | - | chr4_1:45509014-45509033 | None:intergenic | 30.0% | |
TCTCTTATTGTCTTCAATGT+AGG | + | chr4_1:45509279-45509298 | Msa0550100:intron | 30.0% | |
! | AATTTTTCCAGTCTTTCATG+AGG | + | chr4_1:45509496-45509515 | Msa0550100:intron | 30.0% |
! | ATTTTTCCAGTCTTTCATGA+GGG | + | chr4_1:45509497-45509516 | Msa0550100:intron | 30.0% |
! | TTCATGAGGGTGTAAAAAAA+AGG | + | chr4_1:45509510-45509529 | Msa0550100:intron | 30.0% |
TTTAAGCTTGTAGCTTGATA+CGG | + | chr4_1:45510027-45510046 | Msa0550100:intron | 30.0% | |
GTATACTGTCCAATATGTTT+AGG | + | chr4_1:45510115-45510134 | Msa0550100:intron | 30.0% | |
!!! | TGATGTTCACTTTTTTGGTA+AGG | - | chr4_1:45510403-45510422 | None:intergenic | 30.0% |
CACAATGATCAAATATGTTC+GGG | - | chr4_1:45510482-45510501 | None:intergenic | 30.0% | |
!! | CTGGACATTTTTCCATTTTT+AGG | + | chr4_1:45510514-45510533 | Msa0550100:intron | 30.0% |
! | AAAACAGATTTTCCACTGTA+TGG | + | chr4_1:45510550-45510569 | Msa0550100:intron | 30.0% |
! | AAACAGATTTTCCACTGTAT+GGG | + | chr4_1:45510551-45510570 | Msa0550100:intron | 30.0% |
ATTATGTTGAAAGCAGGTAA+TGG | + | chr4_1:45510699-45510718 | Msa0550100:intron | 30.0% | |
!!! | TGTGTGTGTGTTTCTTTTTT+TGG | + | chr4_1:45510769-45510788 | Msa0550100:intron | 30.0% |
!!! | CTTTTTTTGGTGTACAATAG+TGG | + | chr4_1:45510782-45510801 | Msa0550100:intron | 30.0% |
GATGGTTTATATGAGATCAA+AGG | - | chr4_1:45510822-45510841 | None:intergenic | 30.0% | |
TTGTGTGTACATCATAGATT+AGG | - | chr4_1:45510881-45510900 | None:intergenic | 30.0% | |
! | GCCGAGTTTGATTTATTTAT+TGG | - | chr4_1:45511018-45511037 | None:intergenic | 30.0% |
CTAAGGATTTATTAAAGGTC+AGG | - | chr4_1:45511102-45511121 | None:intergenic | 30.0% | |
TTTGACTATCAGTTCTACTA+AGG | - | chr4_1:45511119-45511138 | None:intergenic | 30.0% | |
TGAAATGTAACTTCAGCAAA+AGG | + | chr4_1:45511195-45511214 | Msa0550100:intron | 30.0% | |
ATATCTAAACCGTGTAACTT+GGG | - | chr4_1:45511267-45511286 | None:intergenic | 30.0% | |
TTACACGGTTTAGATATCTT+GGG | + | chr4_1:45511270-45511289 | Msa0550100:intron | 30.0% | |
! | TCTACCAACTTTTCTACTAT+AGG | - | chr4_1:45511602-45511621 | None:intergenic | 30.0% |
AAGAAGAATAGATCAAATGG+AGG | + | chr4_1:45511676-45511695 | Msa0550100:intron | 30.0% | |
! | GTTTCTCTAATGGTTTTCTT+AGG | - | chr4_1:45511731-45511750 | None:intergenic | 30.0% |
! | TTTTCGAATGGTTTCTCTAA+TGG | - | chr4_1:45511741-45511760 | None:intergenic | 30.0% |
AACCATTCGAAAAGATTTAG+AGG | + | chr4_1:45511748-45511767 | Msa0550100:intron | 30.0% | |
! | TGGTTTTTGATAGAACACTA+TGG | + | chr4_1:45511792-45511811 | Msa0550100:intron | 30.0% |
! | TTGTTGTTGTTGTTGTTGTT+TGG | + | chr4_1:45511863-45511882 | Msa0550100:intron | 30.0% |
! | GGATTCGGCTTTTATAATTT+AGG | - | chr4_1:45511910-45511929 | None:intergenic | 30.0% |
TTTATAACAGTCACTACTGA+AGG | - | chr4_1:45512100-45512119 | None:intergenic | 30.0% | |
! | TTATTTATGTTATTTGGGGC+TGG | + | chr4_1:45512208-45512227 | Msa0550100:intron | 30.0% |
! | TTCACATGACACATTCTTTT+TGG | + | chr4_1:45512379-45512398 | Msa0550100:CDS | 30.0% |
CTCGTAAGAAAATGTATTGA+GGG | - | chr4_1:45512585-45512604 | None:intergenic | 30.0% | |
CTACCAAGGAATAAATTGTA+AGG | - | chr4_1:45512663-45512682 | None:intergenic | 30.0% | |
AAGCAAATAAAAACCTTCTG+CGG | + | chr4_1:45512709-45512728 | Msa0550100:CDS | 30.0% | |
TGTATGATTGTGTTGTGTTT+GGG | + | chr4_1:45512821-45512840 | Msa0550100:intron | 30.0% | |
! | TACAAAGTACTTCTGTATTC+TGG | + | chr4_1:45512942-45512961 | Msa0550100:intron | 30.0% |
AGTATAATCTATTATCCCTG+TGG | - | chr4_1:45512987-45513006 | None:intergenic | 30.0% | |
AAATGATGCAAGCATTAATG+AGG | - | chr4_1:45513025-45513044 | None:intergenic | 30.0% | |
TTCGTTTGTAAAAAGGTGAA+CGG | - | chr4_1:45513218-45513237 | None:intergenic | 30.0% | |
! | GATCGTTTTCGTTTGTAAAA+AGG | - | chr4_1:45513225-45513244 | None:intergenic | 30.0% |
! | TTTTCCACATCATACTATAG+AGG | + | chr4_1:45513273-45513292 | Msa0550100:intron | 30.0% |
!!! | TCACTTTTTTGGTTCAATGA+GGG | + | chr4_1:45513330-45513349 | Msa0550100:intron | 30.0% |
GAATTGAAATGGAAAATCAC+GGG | - | chr4_1:45513587-45513606 | None:intergenic | 30.0% | |
! | GTGATTTTCCATTTCAATTC+AGG | + | chr4_1:45513587-45513606 | Msa0550100:intron | 30.0% |
CAAGCCAAATAATCATTACA+GGG | - | chr4_1:45513898-45513917 | None:intergenic | 30.0% | |
ACAAGCCAAATAATCATTAC+AGG | - | chr4_1:45513899-45513918 | None:intergenic | 30.0% | |
GTGATTAACATGTAATCTCT+TGG | - | chr4_1:45513944-45513963 | None:intergenic | 30.0% | |
TCGTATAACAGTTATCATGA+AGG | + | chr4_1:45513968-45513987 | Msa0550100:intron | 30.0% | |
ATCATGAAGGCTTCAAAAAA+TGG | + | chr4_1:45513981-45514000 | Msa0550100:CDS | 30.0% | |
TCATGAAGGCTTCAAAAAAT+GGG | + | chr4_1:45513982-45514001 | Msa0550100:CDS | 30.0% | |
TTCAAAAAATGGGTAGAAGT+AGG | + | chr4_1:45513992-45514011 | Msa0550100:CDS | 30.0% | |
TACTGTTGGCAATGATTATA+TGG | - | chr4_1:45514131-45514150 | None:intergenic | 30.0% | |
CAAATTTAGTGAATGTATCG+GGG | + | chr4_1:45514197-45514216 | Msa0550100:intron | 30.0% | |
ATCCCATACATTATCATTGT+TGG | - | chr4_1:45514293-45514312 | None:intergenic | 30.0% | |
ACATGGAAAATACATGGTTT+AGG | - | chr4_1:45514478-45514497 | None:intergenic | 30.0% | |
CCAAATGTATTGCTTGATAT+TGG | - | chr4_1:45514615-45514634 | None:intergenic | 30.0% | |
CCAATATCAAGCAATACATT+TGG | + | chr4_1:45514612-45514631 | Msa0550100:three_prime_UTR | 30.0% | |
!!! | TGTACGAAGAATTTTGATTG+TGG | + | chr4_1:45514649-45514668 | Msa0550100:three_prime_UTR | 30.0% |
AAACCAACAGAAATTGCAAA+GGG | - | chr4_1:45514726-45514745 | None:intergenic | 30.0% | |
AACAGAAATGTGAAGATAGG+TGG | - | chr4_1:45505760-45505779 | None:intergenic | 35.0% | |
!! | TAATCTCATCGTTGTTTTGC+AGG | - | chr4_1:45505851-45505870 | None:intergenic | 35.0% |
AATGTCATCAAGAGTCTTCA+TGG | + | chr4_1:45505924-45505943 | Msa0550100:CDS | 35.0% | |
CGTGGATATAGGATATTAAG+AGG | + | chr4_1:45506058-45506077 | Msa0550100:intron | 35.0% | |
! | AGGAAACACTTATGCTACTT+TGG | + | chr4_1:45506104-45506123 | Msa0550100:CDS | 35.0% |
!! | GGAAACACTTATGCTACTTT+GGG | + | chr4_1:45506105-45506124 | Msa0550100:CDS | 35.0% |
TGTTATGCAATAGCGCTATA+GGG | - | chr4_1:45506298-45506317 | None:intergenic | 35.0% | |
TATTGTGGTAGCACATATAG+TGG | + | chr4_1:45506494-45506513 | Msa0550100:intron | 35.0% | |
! | AGCACATATAGTGGAAAAGA+TGG | + | chr4_1:45506503-45506522 | Msa0550100:intron | 35.0% |
AAAATAGACTTGGGTGGTTT+GGG | + | chr4_1:45506529-45506548 | Msa0550100:intron | 35.0% | |
GGATTCAAATCATTAGAGGT+AGG | + | chr4_1:45506607-45506626 | Msa0550100:intron | 35.0% | |
GGATCTAGAGATTAATGAGT+TGG | + | chr4_1:45506668-45506687 | Msa0550100:intron | 35.0% | |
! | TCTAGAGATTAATGAGTTGG+CGG | + | chr4_1:45506671-45506690 | Msa0550100:intron | 35.0% |
AAATCAAACCTGAGATCTTG+TGG | - | chr4_1:45506751-45506770 | None:intergenic | 35.0% | |
! | TGTCGTTTGATTCATGTAGT+TGG | + | chr4_1:45506863-45506882 | Msa0550100:intron | 35.0% |
TTTATGGTTGCAGAAAAAGC+TGG | + | chr4_1:45506995-45507014 | Msa0550100:intron | 35.0% | |
TTATGGTTGCAGAAAAAGCT+GGG | + | chr4_1:45506996-45507015 | Msa0550100:intron | 35.0% | |
ACAGGCTGCTAAGAATAAAT+GGG | + | chr4_1:45507046-45507065 | Msa0550100:CDS | 35.0% | |
AAAGCAACTCATATCTAGGA+AGG | + | chr4_1:45507079-45507098 | Msa0550100:CDS | 35.0% | |
TTGATGCACATTTGCATGTA+AGG | + | chr4_1:45507142-45507161 | Msa0550100:intron | 35.0% | |
TCTGCTTCTTCAAATACAAC+AGG | + | chr4_1:45507336-45507355 | Msa0550100:CDS | 35.0% | |
CTGCTTCTTCAAATACAACA+GGG | + | chr4_1:45507337-45507356 | Msa0550100:CDS | 35.0% | |
!!! | TCTTTTTTCTTTCCTTGGGA+AGG | + | chr4_1:45507452-45507471 | Msa0550100:intron | 35.0% |
!!! | CTTTTTTCTTTCCTTGGGAA+GGG | + | chr4_1:45507453-45507472 | Msa0550100:intron | 35.0% |
!!! | TTTTTTCTTTCCTTGGGAAG+GGG | + | chr4_1:45507454-45507473 | Msa0550100:intron | 35.0% |
GAATGGAAACCAGGTAAAAA+GGG | - | chr4_1:45507612-45507631 | None:intergenic | 35.0% | |
TGAATGGAAACCAGGTAAAA+AGG | - | chr4_1:45507613-45507632 | None:intergenic | 35.0% | |
GGTTTCTATTCATGCTTGTT+TGG | + | chr4_1:45507654-45507673 | Msa0550100:intron | 35.0% | |
! | TGTCATTTCATCCCTATATG+CGG | + | chr4_1:45507692-45507711 | Msa0550100:intron | 35.0% |
ACAAGTGCATGTTACCAAAT+GGG | - | chr4_1:45507773-45507792 | None:intergenic | 35.0% | |
AACAAGTGCATGTTACCAAA+TGG | - | chr4_1:45507774-45507793 | None:intergenic | 35.0% | |
! | TAACATGCACTTGTTGATTG+TGG | + | chr4_1:45507779-45507798 | Msa0550100:intron | 35.0% |
TAGAGATAAGCATATAGGTC+AGG | + | chr4_1:45507863-45507882 | Msa0550100:intron | 35.0% | |
!! | AGAAAGTGACAAGTTTTGTG+TGG | + | chr4_1:45507918-45507937 | Msa0550100:intron | 35.0% |
TATGTTTGCCTCTATTTGCT+TGG | + | chr4_1:45508085-45508104 | Msa0550100:intron | 35.0% | |
ATGTTTGCCTCTATTTGCTT+GGG | + | chr4_1:45508086-45508105 | Msa0550100:intron | 35.0% | |
AAATTTCCCCAAGCAAATAG+AGG | - | chr4_1:45508096-45508115 | None:intergenic | 35.0% | |
TTACCACATATTGCAAATGC+AGG | + | chr4_1:45508233-45508252 | Msa0550100:intron | 35.0% | |
TACCACATATTGCAAATGCA+GGG | + | chr4_1:45508234-45508253 | Msa0550100:intron | 35.0% | |
CTATGCTCCAAAAAGAAAGA+AGG | + | chr4_1:45508461-45508480 | Msa0550100:CDS | 35.0% | |
! | GTGACAACCTTCTTTCTTTT+TGG | - | chr4_1:45508471-45508490 | None:intergenic | 35.0% |
TAACTCGAGATAACTTTCAG+AGG | + | chr4_1:45508496-45508515 | Msa0550100:CDS | 35.0% | |
CCCAATCTACATTCAGTTTA+AGG | - | chr4_1:45508534-45508553 | None:intergenic | 35.0% | |
TACTTGACCAAGTATGATCA+CGG | + | chr4_1:45508699-45508718 | Msa0550100:intron | 35.0% | |
ACAACCAACTGTACAGAAAA+TGG | + | chr4_1:45508738-45508757 | Msa0550100:intron | 35.0% | |
CAACCAACTGTACAGAAAAT+GGG | + | chr4_1:45508739-45508758 | Msa0550100:intron | 35.0% | |
! | TTTCCCATTTTCTGTACAGT+TGG | - | chr4_1:45508745-45508764 | None:intergenic | 35.0% |
TTTGATCCATGTTGCTGTAA+AGG | - | chr4_1:45508844-45508863 | None:intergenic | 35.0% | |
! | CATGGAAAAGTATAATGACC+GGG | + | chr4_1:45508917-45508936 | Msa0550100:intron | 35.0% |
TTCTTTGTCAAGGTAAACGA+GGG | - | chr4_1:45509433-45509452 | None:intergenic | 35.0% | |
TTTCTTTGTCAAGGTAAACG+AGG | - | chr4_1:45509434-45509453 | None:intergenic | 35.0% | |
TGTGTCCAACCTGTAAAAAT+AGG | + | chr4_1:45509457-45509476 | Msa0550100:intron | 35.0% | |
AAAAAATAGGCCATGTCATC+CGG | + | chr4_1:45509566-45509585 | Msa0550100:intron | 35.0% | |
TAACGCTTGAAAACCTTGAT+TGG | + | chr4_1:45509590-45509609 | Msa0550100:intron | 35.0% | |
ACTGTATTACTTTGTTGCAG+TGG | + | chr4_1:45509793-45509812 | Msa0550100:intron | 35.0% | |
CTGTATTACTTTGTTGCAGT+GGG | + | chr4_1:45509794-45509813 | Msa0550100:intron | 35.0% | |
TGTATTACTTTGTTGCAGTG+GGG | + | chr4_1:45509795-45509814 | Msa0550100:intron | 35.0% | |
TATCTTCTTGCCTTTAACAG+TGG | - | chr4_1:45509895-45509914 | None:intergenic | 35.0% | |
!! | AACATAAGCAAAAGCATCGT+CGG | + | chr4_1:45509994-45510013 | Msa0550100:intron | 35.0% |
! | AACAGATTTTCCACTGTATG+GGG | + | chr4_1:45510552-45510571 | Msa0550100:intron | 35.0% |
! | TGAGTCTTATATTTGTCCTG+TGG | + | chr4_1:45510575-45510594 | Msa0550100:intron | 35.0% |
TAATGGTTATCTAATGCTGC+AGG | + | chr4_1:45510654-45510673 | Msa0550100:intron | 35.0% | |
!! | ACACTAGAAAGGTATCAACA+CGG | - | chr4_1:45510736-45510755 | None:intergenic | 35.0% |
AGGGTTACAAAGCTTTACAT+TGG | - | chr4_1:45510984-45511003 | None:intergenic | 35.0% | |
!! | ATCAAACTCGGCACTTTTTA+AGG | + | chr4_1:45511026-45511045 | Msa0550100:intron | 35.0% |
ATATCATACCCCAAGTTACA+CGG | + | chr4_1:45511255-45511274 | Msa0550100:intron | 35.0% | |
TATCTAAACCGTGTAACTTG+GGG | - | chr4_1:45511266-45511285 | None:intergenic | 35.0% | |
GATATCTAAACCGTGTAACT+TGG | - | chr4_1:45511268-45511287 | None:intergenic | 35.0% | |
GTTACACGGTTTAGATATCT+TGG | + | chr4_1:45511269-45511288 | Msa0550100:intron | 35.0% | |
TACATCATCGTATTCAAGCT+GGG | + | chr4_1:45511330-45511349 | Msa0550100:intron | 35.0% | |
! | AAAGTACCACTTAAGCTGAA+AGG | + | chr4_1:45511395-45511414 | Msa0550100:intron | 35.0% |
AACTTTCCTTTCAGCTTAAG+TGG | - | chr4_1:45511404-45511423 | None:intergenic | 35.0% | |
AGCTGAAAGGAAAGTTCTAT+CGG | + | chr4_1:45511408-45511427 | Msa0550100:intron | 35.0% | |
AGCACCTATAGTAGAAAAGT+TGG | + | chr4_1:45511595-45511614 | Msa0550100:intron | 35.0% | |
TGGTAGAAAATAGGCTTAGA+TGG | + | chr4_1:45511615-45511634 | Msa0550100:intron | 35.0% | |
GAAAATAGGCTTAGATGGTT+TGG | + | chr4_1:45511620-45511639 | Msa0550100:intron | 35.0% | |
! | GACCTCTAAATCTTTTCGAA+TGG | - | chr4_1:45511753-45511772 | None:intergenic | 35.0% |
AGATTTAGAGGTCAATGAGT+TGG | + | chr4_1:45511760-45511779 | Msa0550100:intron | 35.0% | |
! | CAATGAGTTGGATCCAAATA+TGG | + | chr4_1:45511772-45511791 | Msa0550100:intron | 35.0% |
AAAAGCCGAATCCAAAATCT+TGG | + | chr4_1:45511917-45511936 | Msa0550100:intron | 35.0% | |
! | AAAATCTTGGTGCACTGAAT+CGG | + | chr4_1:45511930-45511949 | Msa0550100:intron | 35.0% |
TACTTCAATCTGTGTTTCAG+CGG | + | chr4_1:45511955-45511974 | Msa0550100:intron | 35.0% | |
AAGCAAGAAGCAATGAATCA+TGG | - | chr4_1:45512190-45512209 | None:intergenic | 35.0% | |
! | ATGCTTTAAATGGCAGTTTC+TGG | + | chr4_1:45512312-45512331 | Msa0550100:intron | 35.0% |
! | CATGACACATTCTTTTTGGA+AGG | + | chr4_1:45512383-45512402 | Msa0550100:CDS | 35.0% |
GTGAAGCAAATTCATGAATC+TGG | + | chr4_1:45512526-45512545 | Msa0550100:CDS | 35.0% | |
AAGCAAATTCATGAATCTGG+TGG | + | chr4_1:45512529-45512548 | Msa0550100:CDS | 35.0% | |
CCTCGTAAGAAAATGTATTG+AGG | - | chr4_1:45512586-45512605 | None:intergenic | 35.0% | |
! | CCTCAATACATTTTCTTACG+AGG | + | chr4_1:45512583-45512602 | Msa0550100:intron | 35.0% |
AGTCATATGCATATCTACCA+AGG | - | chr4_1:45512677-45512696 | None:intergenic | 35.0% | |
TTGGTAGATATGCATATGAC+TGG | + | chr4_1:45512676-45512695 | Msa0550100:intron | 35.0% | |
GTGTATGATTGTGTTGTGTT+TGG | + | chr4_1:45512820-45512839 | Msa0550100:intron | 35.0% | |
GTATGATTGTGTTGTGTTTG+GGG | + | chr4_1:45512822-45512841 | Msa0550100:intron | 35.0% | |
GAAGATAATAGGATGCTCAA+TGG | - | chr4_1:45512848-45512867 | None:intergenic | 35.0% | |
AATCATAATTGGACCATCGA+AGG | - | chr4_1:45513250-45513269 | None:intergenic | 35.0% | |
ATTGAACCAAAAAAGTGACG+CGG | - | chr4_1:45513328-45513347 | None:intergenic | 35.0% | |
!!! | GTCACTTTTTTGGTTCAATG+AGG | + | chr4_1:45513329-45513348 | Msa0550100:intron | 35.0% |
!!! | CACTTTTTTGGTTCAATGAG+GGG | + | chr4_1:45513331-45513350 | Msa0550100:intron | 35.0% |
AACAGCCTCTTGTGTAAAAT+AGG | + | chr4_1:45513419-45513438 | Msa0550100:intron | 35.0% | |
ACAGCCTCTTGTGTAAAATA+GGG | + | chr4_1:45513420-45513439 | Msa0550100:intron | 35.0% | |
! | CTTACCCTATTTTACACAAG+AGG | - | chr4_1:45513427-45513446 | None:intergenic | 35.0% |
CTCTTGTGTAAAATAGGGTA+AGG | + | chr4_1:45513425-45513444 | Msa0550100:intron | 35.0% | |
TAAAAGTAAAAAGGGCAACC+CGG | - | chr4_1:45513517-45513536 | None:intergenic | 35.0% | |
!! | GGTTGCCCTTTTTACTTTTA+TGG | + | chr4_1:45513517-45513536 | Msa0550100:intron | 35.0% |
! | ACTTTTATGGTTCAATGCAC+TGG | + | chr4_1:45513530-45513549 | Msa0550100:intron | 35.0% |
! | CTTTTATGGTTCAATGCACT+GGG | + | chr4_1:45513531-45513550 | Msa0550100:intron | 35.0% |
! | TTTTATGGTTCAATGCACTG+GGG | + | chr4_1:45513532-45513551 | Msa0550100:intron | 35.0% |
ATACAAGGCCTGAATTGAAA+TGG | - | chr4_1:45513598-45513617 | None:intergenic | 35.0% | |
GACTCCCTGTAATGATTATT+TGG | + | chr4_1:45513891-45513910 | Msa0550100:intron | 35.0% | |
AAGATGTCCAAGTTATTGCA+TGG | + | chr4_1:45514065-45514084 | Msa0550100:CDS | 35.0% | |
AGATGTCCAAGTTATTGCAT+GGG | + | chr4_1:45514066-45514085 | Msa0550100:CDS | 35.0% | |
CAATGATTATATGGCGTTCT+CGG | - | chr4_1:45514122-45514141 | None:intergenic | 35.0% | |
!! | ATCATTGTTGGCCTGTTTTT+AGG | - | chr4_1:45514281-45514300 | None:intergenic | 35.0% |
! | AGGCCAACAATGATAATGTA+TGG | + | chr4_1:45514287-45514306 | Msa0550100:intron | 35.0% |
! | GGCCAACAATGATAATGTAT+GGG | + | chr4_1:45514288-45514307 | Msa0550100:intron | 35.0% |
GATAACATCAGAGATCTCTT+CGG | + | chr4_1:45514314-45514333 | Msa0550100:CDS | 35.0% | |
AATCCCATAACAATACCTTG+TGG | - | chr4_1:45514340-45514359 | None:intergenic | 35.0% | |
AGGGTGTAAAACTTGATTGA+TGG | + | chr4_1:45514412-45514431 | Msa0550100:intron | 35.0% | |
GGGTGTAAAACTTGATTGAT+GGG | + | chr4_1:45514413-45514432 | Msa0550100:intron | 35.0% | |
!!! | TTTCCATGTTTTTTTGCAGG+TGG | + | chr4_1:45514489-45514508 | Msa0550100:intron | 35.0% |
AACCAACAGAAATTGCAAAG+GGG | - | chr4_1:45514725-45514744 | None:intergenic | 35.0% | |
CAAACCAACAGAAATTGCAA+AGG | - | chr4_1:45514727-45514746 | None:intergenic | 35.0% | |
GGGATTGTTCAATAGGTAAA+AGG | - | chr4_1:45514797-45514816 | None:intergenic | 35.0% | |
! | TGAACGTTTTTCTTCACGAG+CGG | - | chr4_1:45505724-45505743 | None:intergenic | 40.0% |
GCGAACAGAAATGTGAAGAT+AGG | - | chr4_1:45505763-45505782 | None:intergenic | 40.0% | |
TGACATTGACGATTTCGTTG+TGG | - | chr4_1:45505911-45505930 | None:intergenic | 40.0% | |
!! | AAATTTGGTTTGCTACGACG+TGG | + | chr4_1:45506040-45506059 | Msa0550100:intron | 40.0% |
AGGATATTAAGAGGGAGACA+TGG | + | chr4_1:45506067-45506086 | Msa0550100:intron | 40.0% | |
GGATATTAAGAGGGAGACAT+GGG | + | chr4_1:45506068-45506087 | Msa0550100:intron | 40.0% | |
ACATGGGTGTTAACTGATGA+AGG | + | chr4_1:45506084-45506103 | Msa0550100:CDS | 40.0% | |
! | TTCATCTCTGGAGATACCTT+CGG | - | chr4_1:45506166-45506185 | None:intergenic | 40.0% |
TATCTCCAGAGATGAACTTC+AGG | + | chr4_1:45506170-45506189 | Msa0550100:CDS | 40.0% | |
AACTACCTGAAGTTCATCTC+TGG | - | chr4_1:45506178-45506197 | None:intergenic | 40.0% | |
GTATGTGTTCGGTTAAGTAG+CGG | + | chr4_1:45506263-45506282 | Msa0550100:intron | 40.0% | |
CTGTTATGCAATAGCGCTAT+AGG | - | chr4_1:45506299-45506318 | None:intergenic | 40.0% | |
GCGCTATTGCATAACAGAAT+TGG | + | chr4_1:45506302-45506321 | Msa0550100:intron | 40.0% | |
GTGTGTTAGAGTCAGTATTG+TGG | + | chr4_1:45506479-45506498 | Msa0550100:intron | 40.0% | |
TGGTAGAAAATAGACTTGGG+TGG | + | chr4_1:45506523-45506542 | Msa0550100:intron | 40.0% | |
GAAAATAGACTTGGGTGGTT+TGG | + | chr4_1:45506528-45506547 | Msa0550100:intron | 40.0% | |
GCATTGTGGATTCTGTAGTA+AGG | + | chr4_1:45506565-45506584 | Msa0550100:intron | 40.0% | |
GGATTCTGTAGTAAGGAGAT+TGG | + | chr4_1:45506572-45506591 | Msa0550100:intron | 40.0% | |
AGTAAGGAGATTGGATCAGA+TGG | + | chr4_1:45506581-45506600 | Msa0550100:intron | 40.0% | |
GAGGGGATTCAAATCATTAG+AGG | + | chr4_1:45506603-45506622 | Msa0550100:intron | 40.0% | |
!! | ATCTCAGGTTTGATTTTCCC+CGG | + | chr4_1:45506755-45506774 | Msa0550100:intron | 40.0% |
GTAAACTAGCCCACCTAAAT+TGG | - | chr4_1:45506783-45506802 | None:intergenic | 40.0% | |
! | AAATGAGTTGGCGAAAGACA+TGG | + | chr4_1:45506820-45506839 | Msa0550100:intron | 40.0% |
TACGTGTTTGTGTGCTTCAT+AGG | + | chr4_1:45506951-45506970 | Msa0550100:intron | 40.0% | |
CAAGCTATCTTGAAGACTGA+AGG | - | chr4_1:45507023-45507042 | None:intergenic | 40.0% | |
CACAGGCTGCTAAGAATAAA+TGG | + | chr4_1:45507045-45507064 | Msa0550100:CDS | 40.0% | |
TGGGAAAGCAACTCATATCT+AGG | + | chr4_1:45507075-45507094 | Msa0550100:CDS | 40.0% | |
TTGGACCTTCAACCAGAAAT+TGG | - | chr4_1:45507293-45507312 | None:intergenic | 40.0% | |
TGACTCTATCTTCCACATCT+TGG | - | chr4_1:45507312-45507331 | None:intergenic | 40.0% | |
TCTTCAAATACAACAGGGAC+AGG | + | chr4_1:45507342-45507361 | Msa0550100:CDS | 40.0% | |
GTTGAAACTTGAGAGGGTAA+CGG | + | chr4_1:45507412-45507431 | Msa0550100:intron | 40.0% | |
! | TTTTTCTTTCCTTGGGAAGG+GGG | + | chr4_1:45507455-45507474 | Msa0550100:intron | 40.0% |
! | AGTCAATCACCCTTTTTACC+TGG | + | chr4_1:45507600-45507619 | Msa0550100:intron | 40.0% |
TTCAACGTTGAATGGAAACC+AGG | - | chr4_1:45507621-45507640 | None:intergenic | 40.0% | |
GTTTCCATTCAACGTTGAAG+AGG | + | chr4_1:45507622-45507641 | Msa0550100:intron | 40.0% | |
ATTTCATCCCTATATGCGGT+AGG | + | chr4_1:45507696-45507715 | Msa0550100:intron | 40.0% | |
GCAATTTCCTACCGCATATA+GGG | - | chr4_1:45507706-45507725 | None:intergenic | 40.0% | |
AGCAATTTCCTACCGCATAT+AGG | - | chr4_1:45507707-45507726 | None:intergenic | 40.0% | |
ATATGCGGTAGGAAATTGCT+AGG | + | chr4_1:45507707-45507726 | Msa0550100:intron | 40.0% | |
TGTTGATACACACACCCATT+TGG | + | chr4_1:45507756-45507775 | Msa0550100:intron | 40.0% | |
GTGAGATAGGTATAGGAAGT+TGG | + | chr4_1:45507963-45507982 | Msa0550100:intron | 40.0% | |
GATAGGTATAGGAAGTTGGA+AGG | + | chr4_1:45507967-45507986 | Msa0550100:intron | 40.0% | |
TATGACTTATGAGGTGTGCA+TGG | + | chr4_1:45508020-45508039 | Msa0550100:intron | 40.0% | |
! | ATGGACTGCACTCTATTTCA+TGG | + | chr4_1:45508039-45508058 | Msa0550100:intron | 40.0% |
TGGACTGCACTCTATTTCAT+GGG | + | chr4_1:45508040-45508059 | Msa0550100:intron | 40.0% | |
TGTTTGCCTCTATTTGCTTG+GGG | + | chr4_1:45508087-45508106 | Msa0550100:intron | 40.0% | |
ATGAGATATGCAGAACTCAC+AGG | - | chr4_1:45508205-45508224 | None:intergenic | 40.0% | |
ATATTGCAAATGCAGGGCAT+TGG | + | chr4_1:45508240-45508259 | Msa0550100:intron | 40.0% | |
! | AAGGGTTACTCGGTGAAAAA+GGG | + | chr4_1:45508432-45508451 | Msa0550100:CDS | 40.0% |
AACTGAATGTAGATTGGGGA+TGG | + | chr4_1:45508536-45508555 | Msa0550100:intron | 40.0% | |
CATACTTGGTCAAGTATAGC+TGG | - | chr4_1:45508695-45508714 | None:intergenic | 40.0% | |
TTTCTGTACAGTTGGTTGTG+TGG | - | chr4_1:45508737-45508756 | None:intergenic | 40.0% | |
TATAATGACCGGGAACAAGT+TGG | + | chr4_1:45508927-45508946 | Msa0550100:intron | 40.0% | |
! | ATTCTCATCCAACTTGTTCC+CGG | - | chr4_1:45508938-45508957 | None:intergenic | 40.0% |
GGAATACTCACCAAAATGCT+TGG | + | chr4_1:45508972-45508991 | Msa0550100:intron | 40.0% | |
TGTGAGGTAGAATGTTCATG+TGG | - | chr4_1:45509193-45509212 | None:intergenic | 40.0% | |
TCATACTTCTCTGCCATATC+AGG | + | chr4_1:45509319-45509338 | Msa0550100:intron | 40.0% | |
CATACTTCTCTGCCATATCA+GGG | + | chr4_1:45509320-45509339 | Msa0550100:intron | 40.0% | |
GCTGTCGTAAGAACTTTACT+TGG | - | chr4_1:45509355-45509374 | None:intergenic | 40.0% | |
AAGTAAACGCATCAGATGCA+TGG | - | chr4_1:45509407-45509426 | None:intergenic | 40.0% | |
GACACAGCATTTCTTTGTCA+AGG | - | chr4_1:45509443-45509462 | None:intergenic | 40.0% | |
GTCCAACCTGTAAAAATAGG+CGG | + | chr4_1:45509460-45509479 | Msa0550100:intron | 40.0% | |
TTTACACCCTCATGAAAGAC+TGG | - | chr4_1:45509506-45509525 | None:intergenic | 40.0% | |
GAGTACAACTACACTGCTAA+AGG | + | chr4_1:45509841-45509860 | Msa0550100:CDS | 40.0% | |
CAGTCTTCATCCACTGTTAA+AGG | + | chr4_1:45509882-45509901 | Msa0550100:intron | 40.0% | |
TTCCTCCTTTCCCCAATTTA+CGG | + | chr4_1:45509934-45509953 | Msa0550100:intron | 40.0% | |
CGTAAAGTTCCCGTAAATTG+GGG | - | chr4_1:45509947-45509966 | None:intergenic | 40.0% | |
CCGTAAAGTTCCCGTAAATT+GGG | - | chr4_1:45509948-45509967 | None:intergenic | 40.0% | |
CCCAATTTACGGGAACTTTA+CGG | + | chr4_1:45509945-45509964 | Msa0550100:intron | 40.0% | |
TCCGTAAAGTTCCCGTAAAT+TGG | - | chr4_1:45509949-45509968 | None:intergenic | 40.0% | |
TTGTTCGCGAATGTGAAGAT+TGG | - | chr4_1:45510266-45510285 | None:intergenic | 40.0% | |
TTTGAGCCCGTACCTAAAAA+TGG | - | chr4_1:45510529-45510548 | None:intergenic | 40.0% | |
AATAGACATCAAGCTTCCAC+AGG | - | chr4_1:45510594-45510613 | None:intergenic | 40.0% | |
TGGAAGCTTGATGTCTATTG+CGG | + | chr4_1:45510595-45510614 | Msa0550100:intron | 40.0% | |
TATCTAATGCTGCAGGTTTG+AGG | + | chr4_1:45510661-45510680 | Msa0550100:intron | 40.0% | |
! | ATGTTGAAAGCAGGTAATGG+TGG | + | chr4_1:45510702-45510721 | Msa0550100:intron | 40.0% |
CACACAGACAAACACTAGAA+AGG | - | chr4_1:45510747-45510766 | None:intergenic | 40.0% | |
ATTAGGAAAGCCACTAGGAT+TGG | - | chr4_1:45510864-45510883 | None:intergenic | 40.0% | |
CATAGATTAGGAAAGCCACT+AGG | - | chr4_1:45510869-45510888 | None:intergenic | 40.0% | |
TGATTTATTTATTGGGGGGC+AGG | - | chr4_1:45511010-45511029 | None:intergenic | 40.0% | |
!! | AAACTCGGCACTTTTTAAGG+AGG | + | chr4_1:45511029-45511048 | Msa0550100:intron | 40.0% |
AACTTCAGCAAAAGGAGAAG+TGG | + | chr4_1:45511203-45511222 | Msa0550100:intron | 40.0% | |
ACTTCAGCAAAAGGAGAAGT+GGG | + | chr4_1:45511204-45511223 | Msa0550100:intron | 40.0% | |
TCTTGGGTCCATAGTACAAA+AGG | + | chr4_1:45511286-45511305 | Msa0550100:intron | 40.0% | |
! | TTCTCCGTCCTTTTGTACTA+TGG | - | chr4_1:45511297-45511316 | None:intergenic | 40.0% |
GTACATCATCGTATTCAAGC+TGG | + | chr4_1:45511329-45511348 | Msa0550100:intron | 40.0% | |
GTGGTAAGACTAGACATGAT+AGG | + | chr4_1:45511537-45511556 | Msa0550100:intron | 40.0% | |
AGTCAGGTTAAAAGAGGTAG+AGG | + | chr4_1:45511701-45511720 | Msa0550100:intron | 40.0% | |
!! | TGTTGTTGTTTGGTAGTTGC+AGG | + | chr4_1:45511876-45511895 | Msa0550100:intron | 40.0% |
! | GTGCACCAAGATTTTGGATT+CGG | - | chr4_1:45511925-45511944 | None:intergenic | 40.0% |
! | GATTCAGTGCACCAAGATTT+TGG | - | chr4_1:45511931-45511950 | None:intergenic | 40.0% |
ACTTCAATCTGTGTTTCAGC+GGG | + | chr4_1:45511956-45511975 | Msa0550100:intron | 40.0% | |
AAGGAACCTTTCGAAGAACA+CGG | - | chr4_1:45512081-45512100 | None:intergenic | 40.0% | |
GTGTGACATGTACTCAAGAT+GGG | - | chr4_1:45512454-45512473 | None:intergenic | 40.0% | |
TGTGTGACATGTACTCAAGA+TGG | - | chr4_1:45512455-45512474 | None:intergenic | 40.0% | |
!! | GGCAGTTTCTTTGTTGTTGA+AGG | - | chr4_1:45512487-45512506 | None:intergenic | 40.0% |
TGCCTGAAGATTATGTTCAG+CGG | + | chr4_1:45512503-45512522 | Msa0550100:CDS | 40.0% | |
! | AATCTGGTGGATATGAGTCT+AGG | + | chr4_1:45512542-45512561 | Msa0550100:CDS | 40.0% |
! | ATCTGGTGGATATGAGTCTA+GGG | + | chr4_1:45512543-45512562 | Msa0550100:CDS | 40.0% |
TGCATATGACTGGAAAAGAG+AGG | + | chr4_1:45512686-45512705 | Msa0550100:CDS | 40.0% | |
TGTATTCCGAAATGAAGCAG+TGG | + | chr4_1:45513110-45513129 | Msa0550100:CDS | 40.0% | |
! | TAGAAGGTACGTGAGCTATT+AGG | + | chr4_1:45513163-45513182 | Msa0550100:intron | 40.0% |
TACGTGAGCTATTAGGTTAC+TGG | + | chr4_1:45513170-45513189 | Msa0550100:intron | 40.0% | |
ACGTGAGCTATTAGGTTACT+GGG | + | chr4_1:45513171-45513190 | Msa0550100:intron | 40.0% | |
TCCACATCATACTATAGAGG+AGG | + | chr4_1:45513276-45513295 | Msa0550100:intron | 40.0% | |
ACCTCCTCTATAGTATGATG+TGG | - | chr4_1:45513280-45513299 | None:intergenic | 40.0% | |
ACATCATACTATAGAGGAGG+TGG | + | chr4_1:45513279-45513298 | Msa0550100:intron | 40.0% | |
CATCATACTATAGAGGAGGT+GGG | + | chr4_1:45513280-45513299 | Msa0550100:intron | 40.0% | |
ATCATACTATAGAGGAGGTG+GGG | + | chr4_1:45513281-45513300 | Msa0550100:intron | 40.0% | |
!!! | TTTTTGCCGCGTCACTTTTT+TGG | + | chr4_1:45513319-45513338 | Msa0550100:intron | 40.0% |
GTTGTTGTCATGTGACTGAA+AGG | + | chr4_1:45513376-45513395 | Msa0550100:intron | 40.0% | |
CGTACAATACACCAAATGGT+GGG | + | chr4_1:45513451-45513470 | Msa0550100:intron | 40.0% | |
TTTATGGTTCAATGCACTGG+GGG | + | chr4_1:45513533-45513552 | Msa0550100:intron | 40.0% | |
CTCACTCTCTGTGACTTAAT+AGG | + | chr4_1:45513629-45513648 | Msa0550100:CDS | 40.0% | |
CATGATTTCTTCTCACGCTT+AGG | + | chr4_1:45513659-45513678 | Msa0550100:CDS | 40.0% | |
AGCAGGTTTGAATTTCAGCT+TGG | - | chr4_1:45513829-45513848 | None:intergenic | 40.0% | |
! | TCTGTGTATGGATTGTAAGC+AGG | - | chr4_1:45513846-45513865 | None:intergenic | 40.0% |
! | AACCTAGCATGGAGATTTTC+AGG | + | chr4_1:45513865-45513884 | Msa0550100:CDS | 40.0% |
TGTTCAGACCTGAAATGTTG+CGG | + | chr4_1:45514026-45514045 | Msa0550100:CDS | 40.0% | |
GCAATAACTTGGACATCTTC+AGG | - | chr4_1:45514064-45514083 | None:intergenic | 40.0% | |
GATGTCCAAGTTATTGCATG+GGG | + | chr4_1:45514067-45514086 | Msa0550100:CDS | 40.0% | |
AAAGTCCCCATGCAATAACT+TGG | - | chr4_1:45514075-45514094 | None:intergenic | 40.0% | |
GATCCACCTGCAAAAAAACA+TGG | - | chr4_1:45514495-45514514 | None:intergenic | 40.0% | |
!!! | GTTTTTTTGCAGGTGGATCT+TGG | + | chr4_1:45514496-45514515 | Msa0550100:intron | 40.0% |
! | CGACTTGGAATTGAATGAAG+TGG | + | chr4_1:45514544-45514563 | Msa0550100:exon | 40.0% |
TTCCCCTTTGCAATTTCTGT+TGG | + | chr4_1:45514720-45514739 | Msa0550100:three_prime_UTR | 40.0% | |
GCGGTTCTTAGGTTTGAGAA+TGG | + | chr4_1:45505803-45505822 | Msa0550100:exon | 45.0% | |
ATGGCAGAAGAAGCAGTTCT+TGG | + | chr4_1:45505822-45505841 | Msa0550100:CDS | 45.0% | |
TTTCAGATACGTCGATGCTG+TGG | + | chr4_1:45505947-45505966 | Msa0550100:CDS | 45.0% | |
! | GTTTGCTACGACGTGGATAT+AGG | + | chr4_1:45506047-45506066 | Msa0550100:intron | 45.0% |
! | TCATCTCTGGAGATACCTTC+GGG | - | chr4_1:45506165-45506184 | None:intergenic | 45.0% |
!! | GCACTTAGAGAGAAGCATTG+TGG | + | chr4_1:45506551-45506570 | Msa0550100:intron | 45.0% |
AAGGAGATTGGATCAGATGG+AGG | + | chr4_1:45506584-45506603 | Msa0550100:intron | 45.0% | |
AGGAGATTGGATCAGATGGA+GGG | + | chr4_1:45506585-45506604 | Msa0550100:intron | 45.0% | |
TCAAACCTGAGATCTTGTGG+AGG | - | chr4_1:45506748-45506767 | None:intergenic | 45.0% | |
!! | ATTTTCCCCGGTGCCAATTT+AGG | + | chr4_1:45506767-45506786 | Msa0550100:intron | 45.0% |
ATGTAGTTGGCACCACTTAG+TGG | + | chr4_1:45506876-45506895 | Msa0550100:intron | 45.0% | |
TGTAGTTGGCACCACTTAGT+GGG | + | chr4_1:45506877-45506896 | Msa0550100:intron | 45.0% | |
! | CTTCAAGATAGCTTGTGCAC+AGG | + | chr4_1:45507028-45507047 | Msa0550100:CDS | 45.0% |
GGCTGCTAAGAATAAATGGG+TGG | + | chr4_1:45507049-45507068 | Msa0550100:CDS | 45.0% | |
GTCTCCTCTTCAACGTTGAA+TGG | - | chr4_1:45507629-45507648 | None:intergenic | 45.0% | |
ACGTTGAAGAGGAGACTTGA+TGG | + | chr4_1:45507633-45507652 | Msa0550100:intron | 45.0% | |
! | CACTTGTTGATTGTGGCTGA+CGG | + | chr4_1:45507786-45507805 | Msa0550100:intron | 45.0% |
TAGGTCAGGTCTGTACTCTT+TGG | + | chr4_1:45507877-45507896 | Msa0550100:intron | 45.0% | |
CACTCTATTTCATGGGTGAG+TGG | + | chr4_1:45508047-45508066 | Msa0550100:intron | 45.0% | |
ATTTCATGGGTGAGTGGTGA+TGG | + | chr4_1:45508053-45508072 | Msa0550100:intron | 45.0% | |
TGCCCTGCATTTGCAATATG+TGG | - | chr4_1:45508239-45508258 | None:intergenic | 45.0% | |
TAGGACATGGAAGGGTTACT+CGG | + | chr4_1:45508422-45508441 | Msa0550100:intron | 45.0% | |
! | GAAGGGTTACTCGGTGAAAA+AGG | + | chr4_1:45508431-45508450 | Msa0550100:CDS | 45.0% |
TGAATGTAGATTGGGGATGG+CGG | + | chr4_1:45508539-45508558 | Msa0550100:intron | 45.0% | |
ACCAAGCCTTTACAGCAACA+TGG | + | chr4_1:45508835-45508854 | Msa0550100:intron | 45.0% | |
TCCATGTTGCTGTAAAGGCT+TGG | - | chr4_1:45508839-45508858 | None:intergenic | 45.0% | |
! | GTATTTGCGGCCAAGCATTT+TGG | - | chr4_1:45508985-45509004 | None:intergenic | 45.0% |
!! | CAACCACCATTTTTCTCCAC+CGG | + | chr4_1:45509019-45509038 | Msa0550100:intron | 45.0% |
AAACCGGTGGAGAAAAATGG+TGG | - | chr4_1:45509025-45509044 | None:intergenic | 45.0% | |
CACAAACCGGTGGAGAAAAA+TGG | - | chr4_1:45509028-45509047 | None:intergenic | 45.0% | |
!!! | CATTTTTCTCCACCGGTTTG+TGG | + | chr4_1:45509026-45509045 | Msa0550100:intron | 45.0% |
TCCCACATCAAACACGAACA+GGG | + | chr4_1:45509127-45509146 | Msa0550100:intron | 45.0% | |
TGGGAATGCAATTCGTGTTG+GGG | - | chr4_1:45509230-45509249 | None:intergenic | 45.0% | |
GTGGGAATGCAATTCGTGTT+GGG | - | chr4_1:45509231-45509250 | None:intergenic | 45.0% | |
TGTGGGAATGCAATTCGTGT+TGG | - | chr4_1:45509232-45509251 | None:intergenic | 45.0% | |
CGAATTGCATTCCCACAATG+TGG | + | chr4_1:45509235-45509254 | Msa0550100:intron | 45.0% | |
!! | TGGTAGAAAGCACCCTGATA+TGG | - | chr4_1:45509335-45509354 | None:intergenic | 45.0% |
!!! | CTTTGGCCGCCTATTTTTAC+AGG | - | chr4_1:45509469-45509488 | None:intergenic | 45.0% |
!! | CAAGGTTTTCAAGCGTTAGC+CGG | - | chr4_1:45509588-45509607 | None:intergenic | 45.0% |
ATTGGGGAAAGGAGGAAGAA+GGG | - | chr4_1:45509931-45509950 | None:intergenic | 45.0% | |
AATTGGGGAAAGGAGGAAGA+AGG | - | chr4_1:45509932-45509951 | None:intergenic | 45.0% | |
TCCTCCTTTCCCCAATTTAC+GGG | + | chr4_1:45509935-45509954 | Msa0550100:intron | 45.0% | |
AGTTCCCGTAAATTGGGGAA+AGG | - | chr4_1:45509942-45509961 | None:intergenic | 45.0% | |
ACGGGAACTTTACGGACAAT+AGG | + | chr4_1:45509953-45509972 | Msa0550100:intron | 45.0% | |
ATAAGACTCACCCCATACAG+TGG | - | chr4_1:45510565-45510584 | None:intergenic | 45.0% | |
!! | TAGGATTGGACTAGTGGTGA+GGG | - | chr4_1:45510850-45510869 | None:intergenic | 45.0% |
TTTATTTATTGGGGGGCAGG+AGG | - | chr4_1:45511007-45511026 | None:intergenic | 45.0% | |
TCTACCTTGGAGGTGAAAGT+TGG | + | chr4_1:45511227-45511246 | Msa0550100:intron | 45.0% | |
ATCTCCAACTTTCACCTCCA+AGG | - | chr4_1:45511234-45511253 | None:intergenic | 45.0% | |
GGGTCCATAGTACAAAAGGA+CGG | + | chr4_1:45511290-45511309 | Msa0550100:intron | 45.0% | |
ATCATCGTATTCAAGCTGGG+TGG | + | chr4_1:45511333-45511352 | Msa0550100:intron | 45.0% | |
TTCAAGCTGGGTGGTTGAAA+TGG | + | chr4_1:45511342-45511361 | Msa0550100:intron | 45.0% | |
TTGAAATGGAGAAGAGCCTC+AGG | + | chr4_1:45511356-45511375 | Msa0550100:intron | 45.0% | |
CTTATCGCACAAAACACCTG+AGG | - | chr4_1:45511375-45511394 | None:intergenic | 45.0% | |
GTTAGACCGGCAATGTTGTA+TGG | + | chr4_1:45511437-45511456 | Msa0550100:intron | 45.0% | |
ACCGGCAATGTTGTATGGTA+CGG | + | chr4_1:45511442-45511461 | Msa0550100:intron | 45.0% | |
TCCGTACCATACAACATTGC+CGG | - | chr4_1:45511446-45511465 | None:intergenic | 45.0% | |
TGTTGTATGGTACGGAGTGT+TGG | + | chr4_1:45511450-45511469 | Msa0550100:intron | 45.0% | |
! | GTTGTATGGTACGGAGTGTT+GGG | + | chr4_1:45511451-45511470 | Msa0550100:intron | 45.0% |
CGAGAGTAAAGTAAGCGTAG+CGG | + | chr4_1:45511490-45511509 | Msa0550100:intron | 45.0% | |
TGACACCATTAGAGAGAGAG+TGG | + | chr4_1:45511568-45511587 | Msa0550100:intron | 45.0% | |
GACACCATTAGAGAGAGAGT+GGG | + | chr4_1:45511569-45511588 | Msa0550100:intron | 45.0% | |
ACACCATTAGAGAGAGAGTG+GGG | + | chr4_1:45511570-45511589 | Msa0550100:intron | 45.0% | |
CTTCTTACAACGGCATCTAC+AGG | - | chr4_1:45511662-45511681 | None:intergenic | 45.0% | |
AGATCAAATGGAGGAGAGTC+AGG | + | chr4_1:45511685-45511704 | Msa0550100:intron | 45.0% | |
GAGGAGAGTCAGGTTAAAAG+AGG | + | chr4_1:45511695-45511714 | Msa0550100:intron | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4_1:45506889-45506908 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4_1:45506890-45506909 | None:intergenic | 45.0% |
ATCTGTGTTTCAGCGGGTAT+AGG | + | chr4_1:45511962-45511981 | Msa0550100:intron | 45.0% | |
AGGAACCTTTCGAAGAACAC+GGG | - | chr4_1:45512080-45512099 | None:intergenic | 45.0% | |
ATCACGAGCAGGATGTTGTT+GGG | - | chr4_1:45512360-45512379 | None:intergenic | 45.0% | |
AATCACGAGCAGGATGTTGT+TGG | - | chr4_1:45512361-45512380 | None:intergenic | 45.0% | |
GCCTGAAGATTATGTTCAGC+GGG | + | chr4_1:45512504-45512523 | Msa0550100:CDS | 45.0% | |
ACCCGCTGAACATAATCTTC+AGG | - | chr4_1:45512508-45512527 | None:intergenic | 45.0% | |
! | TCTGGTGGATATGAGTCTAG+GGG | + | chr4_1:45512544-45512563 | Msa0550100:CDS | 45.0% |
GGAAGAAACAGCAGTTGTGT+GGG | - | chr4_1:45512736-45512755 | None:intergenic | 45.0% | |
!! | ACACAACTGCTGTTTCTTCC+CGG | + | chr4_1:45512736-45512755 | Msa0550100:CDS | 45.0% |
CTATTATCCCTGTGGATGCA+AGG | - | chr4_1:45512979-45512998 | None:intergenic | 45.0% | |
TACGGTCCACTGCTTCATTT+CGG | - | chr4_1:45513119-45513138 | None:intergenic | 45.0% | |
GGAACTCAGCAAGATGTGTA+CGG | - | chr4_1:45513137-45513156 | None:intergenic | 45.0% | |
GCTGAGTTCCATCAGATAGA+AGG | + | chr4_1:45513147-45513166 | Msa0550100:CDS | 45.0% | |
CTCACGTACCTTCTATCTGA+TGG | - | chr4_1:45513158-45513177 | None:intergenic | 45.0% | |
CATAATTGGACCATCGAAGG+TGG | - | chr4_1:45513247-45513266 | None:intergenic | 45.0% | |
TCATACTATAGAGGAGGTGG+GGG | + | chr4_1:45513282-45513301 | Msa0550100:intron | 45.0% | |
GTCATGTGACTGAAAGGTCA+CGG | + | chr4_1:45513382-45513401 | Msa0550100:intron | 45.0% | |
TCATGTGACTGAAAGGTCAC+GGG | + | chr4_1:45513383-45513402 | Msa0550100:intron | 45.0% | |
! | TTACACAAGAGGCTGTTTCC+AGG | - | chr4_1:45513416-45513435 | None:intergenic | 45.0% |
GCTGCGTACAATACACCAAA+TGG | + | chr4_1:45513447-45513466 | Msa0550100:intron | 45.0% | |
GCGTACAATACACCAAATGG+TGG | + | chr4_1:45513450-45513469 | Msa0550100:intron | 45.0% | |
TGAGTCCTCGATCACATACA+AGG | - | chr4_1:45513613-45513632 | None:intergenic | 45.0% | |
TCCATACACAGAACCTAGCA+TGG | + | chr4_1:45513854-45513873 | Msa0550100:CDS | 45.0% | |
TCCATGCTAGGTTCTGTGTA+TGG | - | chr4_1:45513858-45513877 | None:intergenic | 45.0% | |
CACCTGAAAATCTCCATGCT+AGG | - | chr4_1:45513870-45513889 | None:intergenic | 45.0% | |
TGGGTAGAAGTAGGAAACTC+TGG | + | chr4_1:45514001-45514020 | Msa0550100:CDS | 45.0% | |
ACATCTTCAGGAAGTCCCAT+CGG | - | chr4_1:45514052-45514071 | None:intergenic | 45.0% | |
CATGGGGACTTTCTCTTGAA+AGG | + | chr4_1:45514083-45514102 | Msa0550100:CDS | 45.0% | |
!! | TCGGCCACAAGGTATTGTTA+TGG | + | chr4_1:45514333-45514352 | Msa0550100:intron | 45.0% |
!! | CGGCCACAAGGTATTGTTAT+GGG | + | chr4_1:45514334-45514353 | Msa0550100:intron | 45.0% |
!!! | TAATTAATATTTTATAATCT+AGG | + | chr4_1:45508403-45508422 | Msa0550100:intron | 5.0% |
!!! | TATAGATTAATTTAATTTTA+TGG | - | chr4_1:45508872-45508891 | None:intergenic | 5.0% |
!!! | TATTTATTTATTTTTTTGAT+CGG | - | chr4_1:45509546-45509565 | None:intergenic | 5.0% |
!!! | ATATATTATGATTTTAATTA+TGG | + | chr4_1:45510191-45510210 | Msa0550100:intron | 5.0% |
!! | AAAACATATTTAATAAATTA+TGG | + | chr4_1:45510426-45510445 | Msa0550100:intron | 5.0% |
!!! | TTATATGTTTATAATTTTAA+AGG | + | chr4_1:45512903-45512922 | Msa0550100:intron | 5.0% |
AGAACCGCCGCACAATAGAA+CGG | - | chr4_1:45505791-45505810 | None:intergenic | 50.0% | |
TCTATTGTGCGGCGGTTCTT+AGG | + | chr4_1:45505792-45505811 | Msa0550100:five_prime_UTR | 50.0% | |
GGTGAATTTGCAGCTGAACG+TGG | + | chr4_1:45505879-45505898 | Msa0550100:CDS | 50.0% | |
!!! | ATTTTGGCTATTCCGCCCGA+AGG | + | chr4_1:45506147-45506166 | Msa0550100:CDS | 50.0% |
GGAGATTGGATCAGATGGAG+GGG | + | chr4_1:45506586-45506605 | Msa0550100:intron | 50.0% | |
ACCACCAGAACAACCCAAGT+GGG | - | chr4_1:45506699-45506718 | None:intergenic | 50.0% | |
! | TTGGGTTGTTCTGGTGGTGT+TGG | + | chr4_1:45506701-45506720 | Msa0550100:intron | 50.0% |
!! | GTGGTGTTGGCTTACGACTT+TGG | + | chr4_1:45506714-45506733 | Msa0550100:intron | 50.0% |
GTGTTCCTCCACAAGATCTC+AGG | + | chr4_1:45506740-45506759 | Msa0550100:intron | 50.0% | |
TAGCCCACCTAAATTGGCAC+CGG | - | chr4_1:45506777-45506796 | None:intergenic | 50.0% | |
TGGCACCACTTAGTGGGATA+AGG | + | chr4_1:45506883-45506902 | Msa0550100:intron | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4_1:45506891-45506910 | None:intergenic | 50.0% |
CCACTTAGTGGGATAAGGCT+TGG | + | chr4_1:45506888-45506907 | Msa0550100:intron | 50.0% | |
CTGGTTGAAGGTCCAAGATG+TGG | + | chr4_1:45507297-45507316 | Msa0550100:intron | 50.0% | |
! | AGGGTAACGGTAGAAAGAGC+TGG | + | chr4_1:45507425-45507444 | Msa0550100:intron | 50.0% |
CTACTGGCCGTGATCATACT+TGG | - | chr4_1:45508709-45508728 | None:intergenic | 50.0% | |
CTGTACAGTTGGTTGTGTGG+TGG | - | chr4_1:45508734-45508753 | None:intergenic | 50.0% | |
! | CTGTCCAAAGTGCCACAAAC+CGG | - | chr4_1:45509041-45509060 | None:intergenic | 50.0% |
GTGTTTGATGTGGGAGCTCT+GGG | - | chr4_1:45509122-45509141 | None:intergenic | 50.0% | |
CTCCCACATCAAACACGAAC+AGG | + | chr4_1:45509126-45509145 | Msa0550100:intron | 50.0% | |
CCCCTGTTCGTGTTTGATGT+GGG | - | chr4_1:45509131-45509150 | None:intergenic | 50.0% | |
CCCACATCAAACACGAACAG+GGG | + | chr4_1:45509128-45509147 | Msa0550100:intron | 50.0% | |
CCACATCAAACACGAACAGG+GGG | + | chr4_1:45509129-45509148 | Msa0550100:intron | 50.0% | |
! | GGGTGATGATGACTTGTGTG+AGG | - | chr4_1:45509209-45509228 | None:intergenic | 50.0% |
GGGAATGCAATTCGTGTTGG+GGG | - | chr4_1:45509229-45509248 | None:intergenic | 50.0% | |
!!! | GGCCGCCTATTTTTACAGGT+TGG | - | chr4_1:45509465-45509484 | None:intergenic | 50.0% |
TACTTTGTTGCAGTGGGGAG+TGG | + | chr4_1:45509800-45509819 | Msa0550100:intron | 50.0% | |
GCTAAAGGTCAGCCTCTTGA+AGG | + | chr4_1:45509856-45509875 | Msa0550100:CDS | 50.0% | |
AAAGGTCAGCCTCTTGAAGG+TGG | + | chr4_1:45509859-45509878 | Msa0550100:CDS | 50.0% | |
TGAAGACTGCCACCTTCAAG+AGG | - | chr4_1:45509871-45509890 | None:intergenic | 50.0% | |
GGAGGAAGAAGGGTGAACAA+GGG | - | chr4_1:45509921-45509940 | None:intergenic | 50.0% | |
AGGAGGAAGAAGGGTGAACA+AGG | - | chr4_1:45509922-45509941 | None:intergenic | 50.0% | |
TCCCGTAAATTGGGGAAAGG+AGG | - | chr4_1:45509939-45509958 | None:intergenic | 50.0% | |
!! | AGGATTGGACTAGTGGTGAG+GGG | - | chr4_1:45510849-45510868 | None:intergenic | 50.0% |
!! | CTAGGATTGGACTAGTGGTG+AGG | - | chr4_1:45510851-45510870 | None:intergenic | 50.0% |
CACCACTAGTCCAATCCTAG+TGG | + | chr4_1:45510851-45510870 | Msa0550100:intron | 50.0% | |
! | AGCCACTAGGATTGGACTAG+TGG | - | chr4_1:45510856-45510875 | None:intergenic | 50.0% |
ACTCCGTCTTGCTTCTACTC+AGG | - | chr4_1:45511172-45511191 | None:intergenic | 50.0% | |
AAGGAGAAGTGGGTCTACCT+TGG | + | chr4_1:45511214-45511233 | Msa0550100:intron | 50.0% | |
CTATCGGACAGCAGTTAGAC+CGG | + | chr4_1:45511424-45511443 | Msa0550100:intron | 50.0% | |
! | AAGTAAGCGTAGCGGAGATG+AGG | + | chr4_1:45511498-45511517 | Msa0550100:intron | 50.0% |
AGGATGTTGCGTTGGATGAG+TGG | + | chr4_1:45511518-45511537 | Msa0550100:intron | 50.0% | |
CACCATTAGAGAGAGAGTGG+GGG | + | chr4_1:45511571-45511590 | Msa0550100:intron | 50.0% | |
TACCCCCACTCTCTCTCTAA+TGG | - | chr4_1:45511576-45511595 | None:intergenic | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | - | chr4_1:45511837-45511856 | None:intergenic | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4_1:45506891-45506910 | None:intergenic | 50.0% |
CCACTTAGTGGGATAAGGCT+TGG | + | chr4_1:45506888-45506907 | Msa0550100:intron | 50.0% | |
GTTTCAGCGGGTATAGGATG+AGG | + | chr4_1:45511968-45511987 | Msa0550100:intron | 50.0% | |
GCGGGTATAGGATGAGGTTA+TGG | + | chr4_1:45511974-45511993 | Msa0550100:intron | 50.0% | |
ATGTTGTTGGGGCTGGAACA+AGG | - | chr4_1:45512348-45512367 | None:intergenic | 50.0% | |
TCACGAGCAGGATGTTGTTG+GGG | - | chr4_1:45512359-45512378 | None:intergenic | 50.0% | |
GTGTCATGTGAATCACGAGC+AGG | - | chr4_1:45512371-45512390 | None:intergenic | 50.0% | |
! | CTGGTGGATATGAGTCTAGG+GGG | + | chr4_1:45512545-45512564 | Msa0550100:CDS | 50.0% |
GGGAAGAAACAGCAGTTGTG+TGG | - | chr4_1:45512737-45512756 | None:intergenic | 50.0% | |
ACATACAAACCTGTGCCAGC+TGG | - | chr4_1:45512770-45512789 | None:intergenic | 50.0% | |
! | TGCCTTTTCCTTGCATCCAC+AGG | + | chr4_1:45512968-45512987 | Msa0550100:intron | 50.0% |
! | GCCTTTTCCTTGCATCCACA+GGG | + | chr4_1:45512969-45512988 | Msa0550100:intron | 50.0% |
TCCCTGTGGATGCAAGGAAA+AGG | - | chr4_1:45512973-45512992 | None:intergenic | 50.0% | |
CGAAAACGATCCACCTTCGA+TGG | + | chr4_1:45513234-45513253 | Msa0550100:intron | 50.0% | |
GGTTCAATGAGGGGTAACCT+TGG | + | chr4_1:45513340-45513359 | Msa0550100:intron | 50.0% | |
CAACTTTACCAGTTGCGCCA+AGG | - | chr4_1:45513360-45513379 | None:intergenic | 50.0% | |
! | TCAGGCCTTGTATGTGATCG+AGG | + | chr4_1:45513605-45513624 | Msa0550100:intron | 50.0% |
! | TCTCTGGAGATACCTTCGGG+CGG | - | chr4_1:45506162-45506181 | None:intergenic | 55.0% |
! | ATGAGTTGGCGGAACCCACT+TGG | + | chr4_1:45506682-45506701 | Msa0550100:intron | 55.0% |
! | TGAGTTGGCGGAACCCACTT+GGG | + | chr4_1:45506683-45506702 | Msa0550100:intron | 55.0% |
! | GGAACCCACTTGGGTTGTTC+TGG | + | chr4_1:45506692-45506711 | Msa0550100:intron | 55.0% |
! | ACCCACTTGGGTTGTTCTGG+TGG | + | chr4_1:45506695-45506714 | Msa0550100:intron | 55.0% |
CACCACCAGAACAACCCAAG+TGG | - | chr4_1:45506700-45506719 | None:intergenic | 55.0% | |
! | TTCCCCGGTGCCAATTTAGG+TGG | + | chr4_1:45506770-45506789 | Msa0550100:intron | 55.0% |
! | TCCCCGGTGCCAATTTAGGT+GGG | + | chr4_1:45506771-45506790 | Msa0550100:intron | 55.0% |
AGCCCACCTAAATTGGCACC+GGG | - | chr4_1:45506776-45506795 | None:intergenic | 55.0% | |
CATTGACAACCCCCTTCCCA+AGG | - | chr4_1:45507467-45507486 | None:intergenic | 55.0% | |
! | TGGTTGTGTGGTGGAGCTAC+TGG | - | chr4_1:45508725-45508744 | None:intergenic | 55.0% |
!! | TCCACCGGTTTGTGGCACTT+TGG | + | chr4_1:45509034-45509053 | Msa0550100:intron | 55.0% |
! | TCCAAAGTGCCACAAACCGG+TGG | - | chr4_1:45509038-45509057 | None:intergenic | 55.0% |
CGGTTTGTGGCACTTTGGAC+AGG | + | chr4_1:45509039-45509058 | Msa0550100:intron | 55.0% | |
CGTGTTTGATGTGGGAGCTC+TGG | - | chr4_1:45509123-45509142 | None:intergenic | 55.0% | |
CCCCCTGTTCGTGTTTGATG+TGG | - | chr4_1:45509132-45509151 | None:intergenic | 55.0% | |
TTCCCACAATGTGGCGTGCT+CGG | + | chr4_1:45509244-45509263 | Msa0550100:intron | 55.0% | |
CAAGCGTTAGCCGGATGACA+TGG | - | chr4_1:45509579-45509598 | None:intergenic | 55.0% | |
CTAGTGGTGAGGGGTTTGGA+TGG | - | chr4_1:45510840-45510859 | None:intergenic | 55.0% | |
!! | TGGACTAGTGGTGAGGGGTT+TGG | - | chr4_1:45510844-45510863 | None:intergenic | 55.0% |
TTTATTGGGGGGCAGGAGGA+GGG | - | chr4_1:45511003-45511022 | None:intergenic | 55.0% | |
ATTTATTGGGGGGCAGGAGG+AGG | - | chr4_1:45511004-45511023 | None:intergenic | 55.0% | |
GGAGGCTTTCAAGCAAGCAG+TGG | + | chr4_1:45511047-45511066 | Msa0550100:intron | 55.0% | |
CCGTCTTGCTTCTACTCAGG+CGG | - | chr4_1:45511169-45511188 | None:intergenic | 55.0% | |
CCGCCTGAGTAGAAGCAAGA+CGG | + | chr4_1:45511166-45511185 | Msa0550100:intron | 55.0% | |
GAGAAGTGGGTCTACCTTGG+AGG | + | chr4_1:45511217-45511236 | Msa0550100:intron | 55.0% | |
!! | GTATGGTACGGAGTGTTGGG+CGG | + | chr4_1:45511454-45511473 | Msa0550100:intron | 55.0% |
CGGAGATGAGGATGTTGCGT+TGG | + | chr4_1:45511510-45511529 | Msa0550100:intron | 55.0% | |
ACTAAGTGGGGTCGGCTACA+TGG | - | chr4_1:45511829-45511848 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | + | chr4_1:45511828-45511847 | Msa0550100:intron | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | + | chr4_1:45511829-45511848 | Msa0550100:intron | 55.0% | |
CGACCCCACTTAGTGGGATA+AGG | + | chr4_1:45511835-45511854 | Msa0550100:intron | 55.0% | |
GAACGCCCGTGTTCTTCGAA+AGG | + | chr4_1:45512072-45512091 | Msa0550100:intron | 55.0% | |
TTCCCGGATGCTTTACCAGC+TGG | + | chr4_1:45512752-45512771 | Msa0550100:CDS | 55.0% | |
! | TGCCAGCTGGTAAAGCATCC+GGG | - | chr4_1:45512757-45512776 | None:intergenic | 55.0% |
! | GTGCCAGCTGGTAAAGCATC+CGG | - | chr4_1:45512758-45512777 | None:intergenic | 55.0% |
GATGCTTTACCAGCTGGCAC+AGG | + | chr4_1:45512758-45512777 | Msa0550100:CDS | 55.0% | |
AAGGTCACGGGTTCAAGTCC+TGG | + | chr4_1:45513395-45513414 | Msa0550100:intron | 55.0% | |
CTAGAGCTCCCGCATATGCA+GGG | - | chr4_1:45513490-45513509 | None:intergenic | 55.0% | |
ACTAGAGCTCCCGCATATGC+AGG | - | chr4_1:45513491-45513510 | None:intergenic | 55.0% | |
ACCTGAAATGTTGCGGCCGA+TGG | + | chr4_1:45514033-45514052 | Msa0550100:CDS | 55.0% | |
CCTGAAATGTTGCGGCCGAT+GGG | + | chr4_1:45514034-45514053 | Msa0550100:CDS | 55.0% | |
CAGAGATCTCTTCGGCCACA+AGG | + | chr4_1:45514322-45514341 | Msa0550100:CDS | 55.0% | |
GCCGTCGCCGTTCTATTGTG+CGG | + | chr4_1:45505781-45505800 | Msa0550100:five_prime_UTR | 60.0% | |
GCCGCACAATAGAACGGCGA+CGG | - | chr4_1:45505785-45505804 | None:intergenic | 60.0% | |
GTCGCCGTTCTATTGTGCGG+CGG | + | chr4_1:45505784-45505803 | Msa0550100:five_prime_UTR | 60.0% | |
GCCCACCTAAATTGGCACCG+GGG | - | chr4_1:45506775-45506794 | None:intergenic | 60.0% | |
GTCCGAGCACGCCACATTGT+GGG | - | chr4_1:45509249-45509268 | None:intergenic | 60.0% | |
TGTCCGAGCACGCCACATTG+TGG | - | chr4_1:45509250-45509269 | None:intergenic | 60.0% | |
GAGCAGGATGTTGTTGGGGC+TGG | - | chr4_1:45512355-45512374 | None:intergenic | 60.0% | |
CAGTTGTGTGGGTCCGCAGA+AGG | - | chr4_1:45512725-45512744 | None:intergenic | 60.0% | |
AGGGGTAACCTTGGCGCAAC+TGG | + | chr4_1:45513349-45513368 | Msa0550100:intron | 60.0% | |
! | CAAATGGTGGGACCCCTTCC+CGG | + | chr4_1:45513463-45513482 | Msa0550100:intron | 60.0% |
CATATGCAGGGTCCGGGAAG+GGG | - | chr4_1:45513478-45513497 | None:intergenic | 60.0% | |
GCATATGCAGGGTCCGGGAA+GGG | - | chr4_1:45513479-45513498 | None:intergenic | 60.0% | |
CTTCCCGGACCCTGCATATG+CGG | + | chr4_1:45513478-45513497 | Msa0550100:intron | 60.0% | |
TTCCCGGACCCTGCATATGC+GGG | + | chr4_1:45513479-45513498 | Msa0550100:intron | 60.0% | |
! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr4_1:45513495-45513514 | Msa0550100:intron | 60.0% |
CCCATCGGCCGCAACATTTC+AGG | - | chr4_1:45514037-45514056 | None:intergenic | 60.0% | |
CGGGAAGGGGTCCCACCATT+TGG | - | chr4_1:45513465-45513484 | None:intergenic | 65.0% | |
CGCATATGCAGGGTCCGGGA+AGG | - | chr4_1:45513480-45513499 | None:intergenic | 65.0% | |
CTCCCGCATATGCAGGGTCC+GGG | - | chr4_1:45513484-45513503 | None:intergenic | 65.0% | |
GCTCCCGCATATGCAGGGTC+CGG | - | chr4_1:45513485-45513504 | None:intergenic | 65.0% | |
! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr4_1:45513496-45513515 | Msa0550100:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 45505699 | 45514829 | 45505699 | ID=Msa0550100;Name=Msa0550100 |
chr4_1 | mRNA | 45505699 | 45514829 | 45505699 | ID=Msa0550100-mRNA-1;Parent=Msa0550100;Name=Msa0550100-mRNA-1;_AED=0.14;_eAED=0.14;_QI=123|0.93|0.94|1|1|1|17|268|473 |
chr4_1 | exon | 45505699 | 45505968 | 45505699 | ID=Msa0550100-mRNA-1:exon:11996;Parent=Msa0550100-mRNA-1 |
chr4_1 | exon | 45506069 | 45506191 | 45506069 | ID=Msa0550100-mRNA-1:exon:11997;Parent=Msa0550100-mRNA-1 |
chr4_1 | exon | 45507008 | 45507100 | 45507008 | ID=Msa0550100-mRNA-1:exon:11998;Parent=Msa0550100-mRNA-1 |
chr4_1 | exon | 45507307 | 45507363 | 45507307 | ID=Msa0550100-mRNA-1:exon:11999;Parent=Msa0550100-mRNA-1 |
chr4_1 | exon | 45508255 | 45508310 | 45508255 | ID=Msa0550100-mRNA-1:exon:12000;Parent=Msa0550100-mRNA-1 |
chr4_1 | exon | 45508425 | 45508517 | 45508425 | ID=Msa0550100-mRNA-1:exon:12001;Parent=Msa0550100-mRNA-1 |
chr4_1 | exon | 45509813 | 45509896 | 45509813 | ID=Msa0550100-mRNA-1:exon:12002;Parent=Msa0550100-mRNA-1 |
chr4_1 | exon | 45510676 | 45510714 | 45510676 | ID=Msa0550100-mRNA-1:exon:12003;Parent=Msa0550100-mRNA-1 |
chr4_1 | exon | 45512328 | 45512404 | 45512328 | ID=Msa0550100-mRNA-1:exon:12004;Parent=Msa0550100-mRNA-1 |
chr4_1 | exon | 45512482 | 45512566 | 45512482 | ID=Msa0550100-mRNA-1:exon:12005;Parent=Msa0550100-mRNA-1 |
chr4_1 | exon | 45512683 | 45512779 | 45512683 | ID=Msa0550100-mRNA-1:exon:12006;Parent=Msa0550100-mRNA-1 |
chr4_1 | exon | 45513072 | 45513168 | 45513072 | ID=Msa0550100-mRNA-1:exon:12007;Parent=Msa0550100-mRNA-1 |
chr4_1 | exon | 45513609 | 45513680 | 45513609 | ID=Msa0550100-mRNA-1:exon:12008;Parent=Msa0550100-mRNA-1 |
chr4_1 | exon | 45513820 | 45513886 | 45513820 | ID=Msa0550100-mRNA-1:exon:12009;Parent=Msa0550100-mRNA-1 |
chr4_1 | exon | 45513979 | 45514104 | 45513979 | ID=Msa0550100-mRNA-1:exon:12010;Parent=Msa0550100-mRNA-1 |
chr4_1 | exon | 45514289 | 45514343 | 45514289 | ID=Msa0550100-mRNA-1:exon:12011;Parent=Msa0550100-mRNA-1 |
chr4_1 | exon | 45514508 | 45514829 | 45514508 | ID=Msa0550100-mRNA-1:exon:12012;Parent=Msa0550100-mRNA-1 |
chr4_1 | five_prime_UTR | 45505699 | 45505821 | 45505699 | ID=Msa0550100-mRNA-1:five_prime_utr;Parent=Msa0550100-mRNA-1 |
chr4_1 | CDS | 45505822 | 45505968 | 45505822 | ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1 |
chr4_1 | CDS | 45506069 | 45506191 | 45506069 | ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1 |
chr4_1 | CDS | 45507008 | 45507100 | 45507008 | ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1 |
chr4_1 | CDS | 45507307 | 45507363 | 45507307 | ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1 |
chr4_1 | CDS | 45508255 | 45508310 | 45508255 | ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1 |
chr4_1 | CDS | 45508425 | 45508517 | 45508425 | ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1 |
chr4_1 | CDS | 45509813 | 45509896 | 45509813 | ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1 |
chr4_1 | CDS | 45510676 | 45510714 | 45510676 | ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1 |
chr4_1 | CDS | 45512328 | 45512404 | 45512328 | ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1 |
chr4_1 | CDS | 45512482 | 45512566 | 45512482 | ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1 |
chr4_1 | CDS | 45512683 | 45512779 | 45512683 | ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1 |
chr4_1 | CDS | 45513072 | 45513168 | 45513072 | ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1 |
chr4_1 | CDS | 45513609 | 45513680 | 45513609 | ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1 |
chr4_1 | CDS | 45513820 | 45513886 | 45513820 | ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1 |
chr4_1 | CDS | 45513979 | 45514104 | 45513979 | ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1 |
chr4_1 | CDS | 45514289 | 45514343 | 45514289 | ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1 |
chr4_1 | CDS | 45514508 | 45514561 | 45514508 | ID=Msa0550100-mRNA-1:cds;Parent=Msa0550100-mRNA-1 |
chr4_1 | three_prime_UTR | 45514562 | 45514829 | 45514562 | ID=Msa0550100-mRNA-1:three_prime_utr;Parent=Msa0550100-mRNA-1 |
Gene Sequence |
Protein sequence |