Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0649170 | XP_003607570.1 | 95.000 | 260 | 9 | 1 | 1 | 260 | 1 | 256 | 5.40e-179 | 502 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0649170 | sp|Q9S7Y1|BH030_ARATH | 37.891 | 256 | 134 | 9 | 4 | 249 | 111 | 351 | 4.93e-32 | 124 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0649170 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0608730 | Msa0649170 | 0.894591 | 2.136213e-75 | -8.615850e-47 |
| Msa0649170 | Msa0734250 | 0.805335 | 1.403202e-49 | -8.615850e-47 |
| Msa0649170 | Msa1444790 | 0.979478 | 4.671836e-148 | -8.615850e-47 |
| Msa0649170 | Msa1445910 | -0.808169 | 3.534718e-50 | -8.615850e-47 |
| Msa0555220 | Msa0649170 | 0.984296 | 3.767322e-160 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0649170 | MtrunA17_Chr4g0041051 | 95.000 | 260 | 9 | 1 | 1 | 260 | 1 | 256 | 0.0 | 502 |
| Msa0649170 | MtrunA17_Chr2g0325521 | 73.077 | 260 | 57 | 3 | 1 | 260 | 1 | 247 | 3.55e-114 | 328 |
| Msa0649170 | MtrunA17_Chr4g0045901 | 40.964 | 249 | 138 | 6 | 6 | 248 | 10 | 255 | 9.05e-43 | 146 |
| Msa0649170 | MtrunA17_Chr7g0255961 | 41.294 | 201 | 101 | 5 | 47 | 246 | 58 | 242 | 4.06e-37 | 131 |
| Msa0649170 | MtrunA17_Chr1g0198801 | 41.667 | 192 | 101 | 2 | 68 | 255 | 154 | 338 | 2.40e-34 | 126 |
| Msa0649170 | MtrunA17_Chr3g0113721 | 38.265 | 196 | 106 | 4 | 64 | 248 | 31 | 222 | 4.73e-34 | 122 |
| Msa0649170 | MtrunA17_Chr5g0412371 | 35.897 | 156 | 90 | 2 | 60 | 209 | 33 | 184 | 1.61e-25 | 100 |
| Msa0649170 | MtrunA17_Chr5g0427361 | 39.634 | 164 | 72 | 3 | 64 | 201 | 28 | 190 | 6.30e-21 | 89.0 |
| Msa0649170 | MtrunA17_Chr2g0283714 | 53.846 | 78 | 33 | 1 | 104 | 181 | 16 | 90 | 4.26e-20 | 83.6 |
| Msa0649170 | MtrunA17_Chr5g0400621 | 27.568 | 185 | 93 | 6 | 47 | 201 | 133 | 306 | 9.00e-12 | 64.3 |
| Msa0649170 | MtrunA17_Chr8g0365711 | 28.814 | 177 | 90 | 5 | 79 | 225 | 248 | 418 | 4.06e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0649170 | AT1G68810.1 | 37.891 | 256 | 134 | 9 | 4 | 249 | 111 | 351 | 5.01e-33 | 124 |
| Msa0649170 | AT3G56770.1 | 39.535 | 172 | 95 | 4 | 67 | 236 | 40 | 204 | 1.85e-28 | 108 |
| Msa0649170 | AT3G25710.1 | 41.830 | 153 | 88 | 1 | 68 | 220 | 128 | 279 | 7.23e-28 | 109 |
| Msa0649170 | AT2G40200.1 | 35.294 | 187 | 111 | 4 | 74 | 253 | 65 | 248 | 3.17e-26 | 103 |
| Msa0649170 | AT2G41130.1 | 36.199 | 221 | 126 | 5 | 25 | 236 | 13 | 227 | 3.87e-25 | 100 |
| Msa0649170 | AT4G38070.1 | 34.752 | 141 | 85 | 2 | 61 | 201 | 81 | 214 | 3.82e-17 | 79.0 |
| Msa0649170 | AT4G37850.2 | 24.865 | 185 | 106 | 5 | 74 | 233 | 151 | 327 | 1.42e-11 | 63.9 |
| Msa0649170 | AT4G37850.1 | 24.865 | 185 | 106 | 5 | 74 | 233 | 151 | 327 | 1.42e-11 | 63.9 |
Find 41 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAACTTTCTCTTTGGTTT+TGG | 0.189232 | 4_3:-55746508 | Msa0649170:CDS |
| GATTGGGGTTATGATATATT+TGG | 0.190751 | 4_3:-55746600 | Msa0649170:CDS |
| GACATTTGAAAGAGCTAAAA+AGG | 0.203088 | 4_3:-55744854 | Msa0649170:CDS |
| AAAGCAGATATTGCAACTTT+TGG | 0.234706 | 4_3:-55744645 | Msa0649170:CDS |
| AGTGATGCTTTAATTGAAAA+AGG | 0.247436 | 4_3:+55744741 | None:intergenic |
| TTATGGTTCAACTTTCTCTT+TGG | 0.279286 | 4_3:-55746514 | Msa0649170:CDS |
| GAAGTAAACAATGAGGTAAT+TGG | 0.285315 | 4_3:-55746543 | Msa0649170:CDS |
| TGTAGAGGCACCTGTTAAAA+TGG | 0.303301 | 4_3:-55746466 | Msa0649170:CDS |
| GAATACAGACAGTTTCTTGC+TGG | 0.381216 | 4_3:-55744561 | Msa0649170:CDS |
| GAGGTAATTGGAAGTGGTTA+TGG | 0.384357 | 4_3:-55746531 | Msa0649170:CDS |
| CTTATTTCATCATTGTCCTT+TGG | 0.388296 | 4_3:+55744798 | None:intergenic |
| TGTCATTCCAGGTGCTTTGA+AGG | 0.393290 | 4_3:-55746331 | Msa0649170:intron |
| GGAGATGCTACTGAGAGAAT+TGG | 0.414764 | 4_3:-55746579 | Msa0649170:CDS |
| GGAAATGGAAGGTTATGATT+GGG | 0.418530 | 4_3:-55746616 | Msa0649170:CDS |
| ACACTTCGTTGTGTCATTCC+AGG | 0.420229 | 4_3:-55746342 | Msa0649170:CDS |
| TGGAAATGGAAGGTTATGAT+TGG | 0.437370 | 4_3:-55746617 | Msa0649170:CDS |
| GAACAAGAGGGAGGTTGGAA+TGG | 0.468944 | 4_3:-55744768 | Msa0649170:CDS |
| CAAGCTCTTAAGTCTGTACT+TGG | 0.491840 | 4_3:-55744528 | Msa0649170:CDS |
| AACAATGAGGTAATTGGAAG+TGG | 0.504571 | 4_3:-55746537 | Msa0649170:CDS |
| ACCTGTTAAAATGGAAGGAA+AGG | 0.510809 | 4_3:-55746457 | Msa0649170:CDS |
| TTGAAGAACAAGAGGGAGGT+TGG | 0.512376 | 4_3:-55744773 | Msa0649170:CDS |
| AATAAGCGTTGAAGAACAAG+AGG | 0.524950 | 4_3:-55744781 | Msa0649170:CDS |
| CTTATATTAGACAATAAACC+TGG | 0.525756 | 4_3:+55744702 | None:intergenic |
| GAGGCACCTGTTAAAATGGA+AGG | 0.536082 | 4_3:-55746462 | Msa0649170:CDS |
| CTATGTTGTGAATATCAACC+AGG | 0.546737 | 4_3:-55744720 | Msa0649170:CDS |
| GAAATGGAAGGTTATGATTG+GGG | 0.551297 | 4_3:-55746615 | Msa0649170:CDS |
| ATGGACAAAGCATCATTACT+TGG | 0.558251 | 4_3:-55744888 | Msa0649170:CDS |
| CAGAGAGGAGGAGAAGAGCT+AGG | 0.569549 | 4_3:-55746383 | Msa0649170:CDS |
| CAAAGCATCATTACTTGGTG+AGG | 0.575226 | 4_3:-55744883 | Msa0649170:CDS |
| CAAGTACAGACTTAAGAGCT+TGG | 0.585666 | 4_3:+55744529 | None:intergenic |
| ATCATAGTGAGGCAGAGAGG+AGG | 0.598403 | 4_3:-55746395 | Msa0649170:CDS |
| CCTGTTAAAATGGAAGGAAA+GGG | 0.600881 | 4_3:-55746456 | Msa0649170:CDS |
| GAACTAACCTTCAAAGCACC+TGG | 0.603639 | 4_3:+55746324 | None:intergenic |
| GGAGAGAGGGGAGCTTGTAG+AGG | 0.606852 | 4_3:-55746481 | Msa0649170:CDS |
| TACTTGGCTATGGAAATGGA+AGG | 0.619525 | 4_3:-55746627 | None:intergenic |
| TGAAGGTTTAATGATACCAA+AGG | 0.625000 | 4_3:-55744814 | Msa0649170:CDS |
| AATGAAGCACAAGCATGTGA+AGG | 0.642340 | 4_3:-55744831 | Msa0649170:CDS |
| AGAATCATAGTGAGGCAGAG+AGG | 0.654591 | 4_3:-55746398 | Msa0649170:CDS |
| AGCTTTGAAGAATCATAGTG+AGG | 0.662555 | 4_3:-55746406 | Msa0649170:CDS |
| AGCGTTGAAGAACAAGAGGG+AGG | 0.722418 | 4_3:-55744777 | Msa0649170:CDS |
| ATAAGCGTTGAAGAACAAGA+GGG | 0.752312 | 4_3:-55744780 | Msa0649170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTTAATAACCAATTATAT+TGG | - | chr4_3:55745025-55745044 | Msa0649170:intron | 15.0% |
| !!! | CTTATTTTTATAAGCATTTT+AGG | + | chr4_3:55745273-55745292 | None:intergenic | 15.0% |
| !!! | AGAGTATTTAATTGTTTTTA+TGG | - | chr4_3:55745770-55745789 | Msa0649170:intron | 15.0% |
| !! | GAATTATAATTCCTTAAAAA+TGG | - | chr4_3:55745808-55745827 | Msa0649170:intron | 15.0% |
| !! | TTCTTAATAACCAATTATAT+TGG | - | chr4_3:55745025-55745044 | Msa0649170:intron | 15.0% |
| !!! | CTTATTTTTATAAGCATTTT+AGG | + | chr4_3:55745273-55745292 | None:intergenic | 15.0% |
| !!! | AGAGTATTTAATTGTTTTTA+TGG | - | chr4_3:55745770-55745789 | Msa0649170:intron | 15.0% |
| !! | GAATTATAATTCCTTAAAAA+TGG | - | chr4_3:55745808-55745827 | Msa0649170:intron | 15.0% |
| !!! | TTTTCTCAATGATTAAAGAA+AGG | + | chr4_3:55744778-55744797 | None:intergenic | 20.0% |
| !!! | TATTTTCTTATATTTGAGAC+CGG | - | chr4_3:55744959-55744978 | Msa0649170:intron | 20.0% |
| !! | TAAATATTTGTGAAACTGTT+TGG | + | chr4_3:55745342-55745361 | None:intergenic | 20.0% |
| !!! | TAACATGGTACTATTTTATT+GGG | - | chr4_3:55745488-55745507 | Msa0649170:intron | 20.0% |
| !! | AGAAATATGTCTTCAAATTA+AGG | + | chr4_3:55745595-55745614 | None:intergenic | 20.0% |
| !!! | CTTCTAAATGGTTTTATTAA+TGG | + | chr4_3:55745752-55745771 | None:intergenic | 20.0% |
| !! | CAATTAAATACTCTTCTAAA+TGG | + | chr4_3:55745764-55745783 | None:intergenic | 20.0% |
| !!! | ATTTCTATGATCCATTTTTA+AGG | + | chr4_3:55745822-55745841 | None:intergenic | 20.0% |
| !!! | TTTTCTCAATGATTAAAGAA+AGG | + | chr4_3:55744778-55744797 | None:intergenic | 20.0% |
| !!! | TATTTTCTTATATTTGAGAC+CGG | - | chr4_3:55744959-55744978 | Msa0649170:intron | 20.0% |
| !! | TAAATATTTGTGAAACTGTT+TGG | + | chr4_3:55745342-55745361 | None:intergenic | 20.0% |
| !!! | TAACATGGTACTATTTTATT+GGG | - | chr4_3:55745488-55745507 | Msa0649170:intron | 20.0% |
| !! | AGAAATATGTCTTCAAATTA+AGG | + | chr4_3:55745595-55745614 | None:intergenic | 20.0% |
| !!! | CTTCTAAATGGTTTTATTAA+TGG | + | chr4_3:55745752-55745771 | None:intergenic | 20.0% |
| !! | CAATTAAATACTCTTCTAAA+TGG | + | chr4_3:55745764-55745783 | None:intergenic | 20.0% |
| !!! | ATTTCTATGATCCATTTTTA+AGG | + | chr4_3:55745822-55745841 | None:intergenic | 20.0% |
| !!! | TCTTTTCTTATATTTGAGAC+CGG | + | chr4_3:55744850-55744869 | None:intergenic | 25.0% |
| ! | CTACTCAATGAATCTAAAAA+AGG | - | chr4_3:55744934-55744953 | Msa0649170:intron | 25.0% |
| ! | ATACTTCACACCAATATAAT+TGG | + | chr4_3:55745038-55745057 | None:intergenic | 25.0% |
| ! | TAACTATCTCTCTAACAAAA+AGG | - | chr4_3:55745195-55745214 | Msa0649170:intron | 25.0% |
| ! | TAGGTTGTCACAATTTATTT+AGG | + | chr4_3:55745403-55745422 | None:intergenic | 25.0% |
| !! | GTAACATGGTACTATTTTAT+TGG | - | chr4_3:55745487-55745506 | Msa0649170:intron | 25.0% |
| ! | TGGTAAATGATCATATGTAA+GGG | - | chr4_3:55745723-55745742 | Msa0649170:intron | 25.0% |
| ! | TATCCAACATAGTTATGTAT+TGG | - | chr4_3:55745853-55745872 | Msa0649170:intron | 25.0% |
| ! | ATCCAACATAGTTATGTATT+GGG | - | chr4_3:55745854-55745873 | Msa0649170:intron | 25.0% |
| ! | TGTTGAATTTAAGTGTTAAG+TGG | + | chr4_3:55746037-55746056 | None:intergenic | 25.0% |
| ! | AGTGATGCTTTAATTGAAAA+AGG | + | chr4_3:55746317-55746336 | None:intergenic | 25.0% |
| ! | CTTATATTAGACAATAAACC+TGG | + | chr4_3:55746356-55746375 | None:intergenic | 25.0% |
| !!! | TCTTTTCTTATATTTGAGAC+CGG | + | chr4_3:55744850-55744869 | None:intergenic | 25.0% |
| ! | CTACTCAATGAATCTAAAAA+AGG | - | chr4_3:55744934-55744953 | Msa0649170:intron | 25.0% |
| ! | ATACTTCACACCAATATAAT+TGG | + | chr4_3:55745038-55745057 | None:intergenic | 25.0% |
| ! | TAACTATCTCTCTAACAAAA+AGG | - | chr4_3:55745195-55745214 | Msa0649170:intron | 25.0% |
| ! | TAGGTTGTCACAATTTATTT+AGG | + | chr4_3:55745403-55745422 | None:intergenic | 25.0% |
| !! | GTAACATGGTACTATTTTAT+TGG | - | chr4_3:55745487-55745506 | Msa0649170:intron | 25.0% |
| ! | TGGTAAATGATCATATGTAA+GGG | - | chr4_3:55745723-55745742 | Msa0649170:intron | 25.0% |
| ! | TATCCAACATAGTTATGTAT+TGG | - | chr4_3:55745853-55745872 | Msa0649170:intron | 25.0% |
| ! | ATCCAACATAGTTATGTATT+GGG | - | chr4_3:55745854-55745873 | Msa0649170:intron | 25.0% |
| ! | TGTTGAATTTAAGTGTTAAG+TGG | + | chr4_3:55746037-55746056 | None:intergenic | 25.0% |
| ! | AGTGATGCTTTAATTGAAAA+AGG | + | chr4_3:55746317-55746336 | None:intergenic | 25.0% |
| ! | CTTATATTAGACAATAAACC+TGG | + | chr4_3:55746356-55746375 | None:intergenic | 25.0% |
| GATTGGGGTTATGATATATT+TGG | - | chr4_3:55744455-55744474 | Msa0649170:CDS | 30.0% | |
| ACTGAGAGAATTGGTAAAAA+TGG | - | chr4_3:55744485-55744504 | Msa0649170:CDS | 30.0% | |
| !!! | TGGTTTTGAAGTAAACAATG+AGG | - | chr4_3:55744505-55744524 | Msa0649170:CDS | 30.0% |
| GAAGTAAACAATGAGGTAAT+TGG | - | chr4_3:55744512-55744531 | Msa0649170:CDS | 30.0% | |
| TTATGGTTCAACTTTCTCTT+TGG | - | chr4_3:55744541-55744560 | Msa0649170:CDS | 30.0% | |
| !! | TTCAACTTTCTCTTTGGTTT+TGG | - | chr4_3:55744547-55744566 | Msa0649170:CDS | 30.0% |
| !!! | TTTCTCTTTGGTTTTGGATA+GGG | - | chr4_3:55744553-55744572 | Msa0649170:CDS | 30.0% |
| AAAGTCATTTACTCCATGTT+TGG | - | chr4_3:55744795-55744814 | Msa0649170:CDS | 30.0% | |
| ! | ATTTAGGTTCTATCCAAACA+TGG | + | chr4_3:55744811-55744830 | None:intergenic | 30.0% |
| CATTGAGTAGTTAATGTATG+TGG | + | chr4_3:55744924-55744943 | None:intergenic | 30.0% | |
| !! | TCATAGTGGATATTAGTCAT+CGG | + | chr4_3:55745072-55745091 | None:intergenic | 30.0% |
| ! | TGACTAGTTAGATTTCATAG+TGG | + | chr4_3:55745086-55745105 | None:intergenic | 30.0% |
| ATATTTGTGAAACTGTTTGG+TGG | + | chr4_3:55745339-55745358 | None:intergenic | 30.0% | |
| ! | ATCAACCAAATAACTAGCTT+AGG | + | chr4_3:55745422-55745441 | None:intergenic | 30.0% |
| AGCTAGTTATTTGGTTGATT+AGG | - | chr4_3:55745423-55745442 | Msa0649170:intron | 30.0% | |
| GCTAGTTATTTGGTTGATTA+GGG | - | chr4_3:55745424-55745443 | Msa0649170:intron | 30.0% | |
| AGGTAAAATCAAGCTTCAAA+TGG | - | chr4_3:55745463-55745482 | Msa0649170:intron | 30.0% | |
| AAGTCACAGTTTGATGTATT+TGG | - | chr4_3:55745536-55745555 | Msa0649170:intron | 30.0% | |
| ATGTCTTCAAATTAAGGCTT+TGG | + | chr4_3:55745589-55745608 | None:intergenic | 30.0% | |
| ATACAAGATGAGATGGATAA+TGG | + | chr4_3:55745645-55745664 | None:intergenic | 30.0% | |
| TTCTTCAATACAAGATGAGA+TGG | + | chr4_3:55745652-55745671 | None:intergenic | 30.0% | |
| ! | ATCTTGTATTGAAGAAGTGT+TGG | - | chr4_3:55745656-55745675 | Msa0649170:intron | 30.0% |
| !! | TCTTGTATTGAAGAAGTGTT+GGG | - | chr4_3:55745657-55745676 | Msa0649170:intron | 30.0% |
| CTGGTAAATGATCATATGTA+AGG | - | chr4_3:55745722-55745741 | Msa0649170:intron | 30.0% | |
| GGTAAATGATCATATGTAAG+GGG | - | chr4_3:55745724-55745743 | Msa0649170:intron | 30.0% | |
| TCCAACATAGTTATGTATTG+GGG | - | chr4_3:55745855-55745874 | Msa0649170:intron | 30.0% | |
| TTAAGTTTAGCGTATAGATG+TGG | + | chr4_3:55745943-55745962 | None:intergenic | 30.0% | |
| GAATGAAAGATATATACGAG+AGG | + | chr4_3:55745986-55746005 | None:intergenic | 30.0% | |
| CTCGTATATATCTTTCATTC+AGG | - | chr4_3:55745986-55746005 | Msa0649170:intron | 30.0% | |
| ! | TTTCCTTTTTATGACACAGA+TGG | - | chr4_3:55746148-55746167 | Msa0649170:intron | 30.0% |
| GACATTTGAAAGAGCTAAAA+AGG | - | chr4_3:55746201-55746220 | Msa0649170:intron | 30.0% | |
| TGAAGGTTTAATGATACCAA+AGG | - | chr4_3:55746241-55746260 | Msa0649170:intron | 30.0% | |
| CTTATTTCATCATTGTCCTT+TGG | + | chr4_3:55746260-55746279 | None:intergenic | 30.0% | |
| ! | AAAGCAGATATTGCAACTTT+TGG | - | chr4_3:55746410-55746429 | Msa0649170:CDS | 30.0% |
| GATTGGGGTTATGATATATT+TGG | - | chr4_3:55744455-55744474 | Msa0649170:CDS | 30.0% | |
| ACTGAGAGAATTGGTAAAAA+TGG | - | chr4_3:55744485-55744504 | Msa0649170:CDS | 30.0% | |
| !!! | TGGTTTTGAAGTAAACAATG+AGG | - | chr4_3:55744505-55744524 | Msa0649170:CDS | 30.0% |
| GAAGTAAACAATGAGGTAAT+TGG | - | chr4_3:55744512-55744531 | Msa0649170:CDS | 30.0% | |
| TTATGGTTCAACTTTCTCTT+TGG | - | chr4_3:55744541-55744560 | Msa0649170:CDS | 30.0% | |
| !! | TTCAACTTTCTCTTTGGTTT+TGG | - | chr4_3:55744547-55744566 | Msa0649170:CDS | 30.0% |
| !!! | TTTCTCTTTGGTTTTGGATA+GGG | - | chr4_3:55744553-55744572 | Msa0649170:CDS | 30.0% |
| AAAGTCATTTACTCCATGTT+TGG | - | chr4_3:55744795-55744814 | Msa0649170:CDS | 30.0% | |
| ! | ATTTAGGTTCTATCCAAACA+TGG | + | chr4_3:55744811-55744830 | None:intergenic | 30.0% |
| CATTGAGTAGTTAATGTATG+TGG | + | chr4_3:55744924-55744943 | None:intergenic | 30.0% | |
| !! | TCATAGTGGATATTAGTCAT+CGG | + | chr4_3:55745072-55745091 | None:intergenic | 30.0% |
| ! | TGACTAGTTAGATTTCATAG+TGG | + | chr4_3:55745086-55745105 | None:intergenic | 30.0% |
| ATATTTGTGAAACTGTTTGG+TGG | + | chr4_3:55745339-55745358 | None:intergenic | 30.0% | |
| ! | ATCAACCAAATAACTAGCTT+AGG | + | chr4_3:55745422-55745441 | None:intergenic | 30.0% |
| AGCTAGTTATTTGGTTGATT+AGG | - | chr4_3:55745423-55745442 | Msa0649170:intron | 30.0% | |
| GCTAGTTATTTGGTTGATTA+GGG | - | chr4_3:55745424-55745443 | Msa0649170:intron | 30.0% | |
| AGGTAAAATCAAGCTTCAAA+TGG | - | chr4_3:55745463-55745482 | Msa0649170:intron | 30.0% | |
| AAGTCACAGTTTGATGTATT+TGG | - | chr4_3:55745536-55745555 | Msa0649170:intron | 30.0% | |
| ATGTCTTCAAATTAAGGCTT+TGG | + | chr4_3:55745589-55745608 | None:intergenic | 30.0% | |
| ATACAAGATGAGATGGATAA+TGG | + | chr4_3:55745645-55745664 | None:intergenic | 30.0% | |
| TTCTTCAATACAAGATGAGA+TGG | + | chr4_3:55745652-55745671 | None:intergenic | 30.0% | |
| ! | ATCTTGTATTGAAGAAGTGT+TGG | - | chr4_3:55745656-55745675 | Msa0649170:intron | 30.0% |
| !! | TCTTGTATTGAAGAAGTGTT+GGG | - | chr4_3:55745657-55745676 | Msa0649170:intron | 30.0% |
| CTGGTAAATGATCATATGTA+AGG | - | chr4_3:55745722-55745741 | Msa0649170:intron | 30.0% | |
| GGTAAATGATCATATGTAAG+GGG | - | chr4_3:55745724-55745743 | Msa0649170:intron | 30.0% | |
| TCCAACATAGTTATGTATTG+GGG | - | chr4_3:55745855-55745874 | Msa0649170:intron | 30.0% | |
| TTAAGTTTAGCGTATAGATG+TGG | + | chr4_3:55745943-55745962 | None:intergenic | 30.0% | |
| GAATGAAAGATATATACGAG+AGG | + | chr4_3:55745986-55746005 | None:intergenic | 30.0% | |
| CTCGTATATATCTTTCATTC+AGG | - | chr4_3:55745986-55746005 | Msa0649170:intron | 30.0% | |
| ! | TTTCCTTTTTATGACACAGA+TGG | - | chr4_3:55746148-55746167 | Msa0649170:intron | 30.0% |
| GACATTTGAAAGAGCTAAAA+AGG | - | chr4_3:55746201-55746220 | Msa0649170:intron | 30.0% | |
| TGAAGGTTTAATGATACCAA+AGG | - | chr4_3:55746241-55746260 | Msa0649170:intron | 30.0% | |
| CTTATTTCATCATTGTCCTT+TGG | + | chr4_3:55746260-55746279 | None:intergenic | 30.0% | |
| ! | AAAGCAGATATTGCAACTTT+TGG | - | chr4_3:55746410-55746429 | Msa0649170:CDS | 30.0% |
| TGGAAATGGAAGGTTATGAT+TGG | - | chr4_3:55744438-55744457 | Msa0649170:CDS | 35.0% | |
| GGAAATGGAAGGTTATGATT+GGG | - | chr4_3:55744439-55744458 | Msa0649170:CDS | 35.0% | |
| GAAATGGAAGGTTATGATTG+GGG | - | chr4_3:55744440-55744459 | Msa0649170:CDS | 35.0% | |
| AACAATGAGGTAATTGGAAG+TGG | - | chr4_3:55744518-55744537 | Msa0649170:CDS | 35.0% | |
| !!! | CTTTCTCTTTGGTTTTGGAT+AGG | - | chr4_3:55744552-55744571 | Msa0649170:CDS | 35.0% |
| ACCTGTTAAAATGGAAGGAA+AGG | - | chr4_3:55744598-55744617 | Msa0649170:CDS | 35.0% | |
| CCTGTTAAAATGGAAGGAAA+GGG | - | chr4_3:55744599-55744618 | Msa0649170:CDS | 35.0% | |
| !! | AGCTTTGAAGAATCATAGTG+AGG | - | chr4_3:55744649-55744668 | Msa0649170:CDS | 35.0% |
| AGGGAGTAAGTGCTTAATTT+AGG | + | chr4_3:55744827-55744846 | None:intergenic | 35.0% | |
| ! | TTCTTATATTTGAGACCGGA+GGG | + | chr4_3:55744963-55744982 | None:intergenic | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | + | chr4_3:55744962-55744981 | None:intergenic | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | - | chr4_3:55744962-55744981 | Msa0649170:intron | 35.0% |
| ! | TTCTTATATTTGAGACCGGA+GGG | - | chr4_3:55744963-55744982 | Msa0649170:intron | 35.0% |
| TACTTATCTTATACTCCCTC+CGG | + | chr4_3:55744981-55745000 | None:intergenic | 35.0% | |
| ATCTAACTAGTCACCTTTAG+TGG | - | chr4_3:55745093-55745112 | Msa0649170:intron | 35.0% | |
| TCTAACTAGTCACCTTTAGT+GGG | - | chr4_3:55745094-55745113 | Msa0649170:intron | 35.0% | |
| GGAAAAACTTTGATTAGGAG+GGG | + | chr4_3:55745124-55745143 | None:intergenic | 35.0% | |
| GGGAAAAACTTTGATTAGGA+GGG | + | chr4_3:55745125-55745144 | None:intergenic | 35.0% | |
| TCTCGGGAAAAACTTTGATT+AGG | + | chr4_3:55745129-55745148 | None:intergenic | 35.0% | |
| ATCCGAGTCTGATATCATAT+AGG | - | chr4_3:55745162-55745181 | Msa0649170:intron | 35.0% | |
| CACCTATATGATATCAGACT+CGG | + | chr4_3:55745167-55745186 | None:intergenic | 35.0% | |
| ! | AAACTGTTTGGTGGAACTTA+TGG | + | chr4_3:55745330-55745349 | None:intergenic | 35.0% |
| GACAACCTAAGCTAGTTATT+TGG | - | chr4_3:55745414-55745433 | Msa0649170:intron | 35.0% | |
| TGATTAGGGTGATGAAAAGA+AGG | - | chr4_3:55745438-55745457 | Msa0649170:intron | 35.0% | |
| GATTAGGGTGATGAAAAGAA+GGG | - | chr4_3:55745439-55745458 | Msa0649170:intron | 35.0% | |
| AAGCTTCAAATGGTGTAACA+TGG | - | chr4_3:55745473-55745492 | Msa0649170:intron | 35.0% | |
| GGAGTATAAACCATACTAGT+TGG | - | chr4_3:55745693-55745712 | Msa0649170:intron | 35.0% | |
| TCCCCAATACATAACTATGT+TGG | + | chr4_3:55745859-55745878 | None:intergenic | 35.0% | |
| ACTACAATAGACCGATGATT+AGG | - | chr4_3:55745898-55745917 | Msa0649170:intron | 35.0% | |
| CTCTTAATGGTCCTAATCAT+CGG | + | chr4_3:55745912-55745931 | None:intergenic | 35.0% | |
| TGTCCATCTGTGTCATAAAA+AGG | + | chr4_3:55746154-55746173 | None:intergenic | 35.0% | |
| ! | ATGGACAAAGCATCATTACT+TGG | - | chr4_3:55746167-55746186 | Msa0649170:intron | 35.0% |
| !! | AATAAGCGTTGAAGAACAAG+AGG | - | chr4_3:55746274-55746293 | Msa0649170:intron | 35.0% |
| !! | ATAAGCGTTGAAGAACAAGA+GGG | - | chr4_3:55746275-55746294 | Msa0649170:intron | 35.0% |
| CTATGTTGTGAATATCAACC+AGG | - | chr4_3:55746335-55746354 | Msa0649170:CDS | 35.0% | |
| ! | TGGTAGATTTTCTGTTTCAC+AGG | - | chr4_3:55746547-55746566 | Msa0649170:CDS | 35.0% |
| TGCTAAGAGCAAGAAAAAGA+AGG | - | chr4_3:55746573-55746592 | Msa0649170:CDS | 35.0% | |
| TAAGAGCAAGAAAAAGAAGG+AGG | - | chr4_3:55746576-55746595 | Msa0649170:CDS | 35.0% | |
| TGGAAATGGAAGGTTATGAT+TGG | - | chr4_3:55744438-55744457 | Msa0649170:CDS | 35.0% | |
| GGAAATGGAAGGTTATGATT+GGG | - | chr4_3:55744439-55744458 | Msa0649170:CDS | 35.0% | |
| GAAATGGAAGGTTATGATTG+GGG | - | chr4_3:55744440-55744459 | Msa0649170:CDS | 35.0% | |
| AACAATGAGGTAATTGGAAG+TGG | - | chr4_3:55744518-55744537 | Msa0649170:CDS | 35.0% | |
| !!! | CTTTCTCTTTGGTTTTGGAT+AGG | - | chr4_3:55744552-55744571 | Msa0649170:CDS | 35.0% |
| ACCTGTTAAAATGGAAGGAA+AGG | - | chr4_3:55744598-55744617 | Msa0649170:CDS | 35.0% | |
| CCTGTTAAAATGGAAGGAAA+GGG | - | chr4_3:55744599-55744618 | Msa0649170:CDS | 35.0% | |
| !! | AGCTTTGAAGAATCATAGTG+AGG | - | chr4_3:55744649-55744668 | Msa0649170:CDS | 35.0% |
| AGGGAGTAAGTGCTTAATTT+AGG | + | chr4_3:55744827-55744846 | None:intergenic | 35.0% | |
| ! | TTCTTATATTTGAGACCGGA+GGG | + | chr4_3:55744963-55744982 | None:intergenic | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | + | chr4_3:55744962-55744981 | None:intergenic | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | - | chr4_3:55744962-55744981 | Msa0649170:intron | 35.0% |
| ! | TTCTTATATTTGAGACCGGA+GGG | - | chr4_3:55744963-55744982 | Msa0649170:intron | 35.0% |
| TACTTATCTTATACTCCCTC+CGG | + | chr4_3:55744981-55745000 | None:intergenic | 35.0% | |
| ATCTAACTAGTCACCTTTAG+TGG | - | chr4_3:55745093-55745112 | Msa0649170:intron | 35.0% | |
| TCTAACTAGTCACCTTTAGT+GGG | - | chr4_3:55745094-55745113 | Msa0649170:intron | 35.0% | |
| GGAAAAACTTTGATTAGGAG+GGG | + | chr4_3:55745124-55745143 | None:intergenic | 35.0% | |
| GGGAAAAACTTTGATTAGGA+GGG | + | chr4_3:55745125-55745144 | None:intergenic | 35.0% | |
| TCTCGGGAAAAACTTTGATT+AGG | + | chr4_3:55745129-55745148 | None:intergenic | 35.0% | |
| ATCCGAGTCTGATATCATAT+AGG | - | chr4_3:55745162-55745181 | Msa0649170:intron | 35.0% | |
| CACCTATATGATATCAGACT+CGG | + | chr4_3:55745167-55745186 | None:intergenic | 35.0% | |
| ! | AAACTGTTTGGTGGAACTTA+TGG | + | chr4_3:55745330-55745349 | None:intergenic | 35.0% |
| GACAACCTAAGCTAGTTATT+TGG | - | chr4_3:55745414-55745433 | Msa0649170:intron | 35.0% | |
| TGATTAGGGTGATGAAAAGA+AGG | - | chr4_3:55745438-55745457 | Msa0649170:intron | 35.0% | |
| GATTAGGGTGATGAAAAGAA+GGG | - | chr4_3:55745439-55745458 | Msa0649170:intron | 35.0% | |
| AAGCTTCAAATGGTGTAACA+TGG | - | chr4_3:55745473-55745492 | Msa0649170:intron | 35.0% | |
| GGAGTATAAACCATACTAGT+TGG | - | chr4_3:55745693-55745712 | Msa0649170:intron | 35.0% | |
| TCCCCAATACATAACTATGT+TGG | + | chr4_3:55745859-55745878 | None:intergenic | 35.0% | |
| ACTACAATAGACCGATGATT+AGG | - | chr4_3:55745898-55745917 | Msa0649170:intron | 35.0% | |
| CTCTTAATGGTCCTAATCAT+CGG | + | chr4_3:55745912-55745931 | None:intergenic | 35.0% | |
| TGTCCATCTGTGTCATAAAA+AGG | + | chr4_3:55746154-55746173 | None:intergenic | 35.0% | |
| ! | ATGGACAAAGCATCATTACT+TGG | - | chr4_3:55746167-55746186 | Msa0649170:intron | 35.0% |
| !! | AATAAGCGTTGAAGAACAAG+AGG | - | chr4_3:55746274-55746293 | Msa0649170:intron | 35.0% |
| !! | ATAAGCGTTGAAGAACAAGA+GGG | - | chr4_3:55746275-55746294 | Msa0649170:intron | 35.0% |
| CTATGTTGTGAATATCAACC+AGG | - | chr4_3:55746335-55746354 | Msa0649170:CDS | 35.0% | |
| ! | TGGTAGATTTTCTGTTTCAC+AGG | - | chr4_3:55746547-55746566 | Msa0649170:CDS | 35.0% |
| TGCTAAGAGCAAGAAAAAGA+AGG | - | chr4_3:55746573-55746592 | Msa0649170:CDS | 35.0% | |
| TAAGAGCAAGAAAAAGAAGG+AGG | - | chr4_3:55746576-55746595 | Msa0649170:CDS | 35.0% | |
| GAGGTAATTGGAAGTGGTTA+TGG | - | chr4_3:55744524-55744543 | Msa0649170:CDS | 40.0% | |
| !! | TGTAGAGGCACCTGTTAAAA+TGG | - | chr4_3:55744589-55744608 | Msa0649170:CDS | 40.0% |
| !! | CCCTTTCCTTCCATTTTAAC+AGG | + | chr4_3:55744602-55744621 | None:intergenic | 40.0% |
| AATTAAGCACTTACTCCCTC+CGG | - | chr4_3:55744828-55744847 | Msa0649170:CDS | 40.0% | |
| CGGGAAAAACTTTGATTAGG+AGG | + | chr4_3:55745126-55745145 | None:intergenic | 40.0% | |
| TTTCCCGAGACTTTGCTTAA+AGG | - | chr4_3:55745139-55745158 | Msa0649170:intron | 40.0% | |
| GATCCTTTAAGCAAAGTCTC+GGG | + | chr4_3:55745145-55745164 | None:intergenic | 40.0% | |
| GGATCCTTTAAGCAAAGTCT+CGG | + | chr4_3:55745146-55745165 | None:intergenic | 40.0% | |
| CTTGTGAAGCTATGCTTACA+AGG | + | chr4_3:55745519-55745538 | None:intergenic | 40.0% | |
| GTGTTGGGAGCTTGAAAATT+TGG | - | chr4_3:55745672-55745691 | Msa0649170:intron | 40.0% | |
| CCAGTTACTACCAACTAGTA+TGG | + | chr4_3:55745706-55745725 | None:intergenic | 40.0% | |
| !! | CCATACTAGTTGGTAGTAAC+TGG | - | chr4_3:55745703-55745722 | Msa0649170:intron | 40.0% |
| TAGTTATGTATTGGGGAGTC+CGG | - | chr4_3:55745862-55745881 | Msa0649170:intron | 40.0% | |
| !! | TGTGGTGTTGTGTCTCTTAA+TGG | + | chr4_3:55745925-55745944 | None:intergenic | 40.0% |
| ! | CAAAGCATCATTACTTGGTG+AGG | - | chr4_3:55746172-55746191 | Msa0649170:intron | 40.0% |
| AATGAAGCACAAGCATGTGA+AGG | - | chr4_3:55746224-55746243 | Msa0649170:intron | 40.0% | |
| ! | GCAGATATTGCAACTTTTGG+AGG | - | chr4_3:55746413-55746432 | Msa0649170:CDS | 40.0% |
| GAATACAGACAGTTTCTTGC+TGG | - | chr4_3:55746494-55746513 | Msa0649170:CDS | 40.0% | |
| CAAGTACAGACTTAAGAGCT+TGG | + | chr4_3:55746529-55746548 | None:intergenic | 40.0% | |
| CAAGCTCTTAAGTCTGTACT+TGG | - | chr4_3:55746527-55746546 | Msa0649170:CDS | 40.0% | |
| GAGGTAATTGGAAGTGGTTA+TGG | - | chr4_3:55744524-55744543 | Msa0649170:CDS | 40.0% | |
| !! | TGTAGAGGCACCTGTTAAAA+TGG | - | chr4_3:55744589-55744608 | Msa0649170:CDS | 40.0% |
| !! | CCCTTTCCTTCCATTTTAAC+AGG | + | chr4_3:55744602-55744621 | None:intergenic | 40.0% |
| AATTAAGCACTTACTCCCTC+CGG | - | chr4_3:55744828-55744847 | Msa0649170:CDS | 40.0% | |
| CGGGAAAAACTTTGATTAGG+AGG | + | chr4_3:55745126-55745145 | None:intergenic | 40.0% | |
| TTTCCCGAGACTTTGCTTAA+AGG | - | chr4_3:55745139-55745158 | Msa0649170:intron | 40.0% | |
| GATCCTTTAAGCAAAGTCTC+GGG | + | chr4_3:55745145-55745164 | None:intergenic | 40.0% | |
| GGATCCTTTAAGCAAAGTCT+CGG | + | chr4_3:55745146-55745165 | None:intergenic | 40.0% | |
| CTTGTGAAGCTATGCTTACA+AGG | + | chr4_3:55745519-55745538 | None:intergenic | 40.0% | |
| GTGTTGGGAGCTTGAAAATT+TGG | - | chr4_3:55745672-55745691 | Msa0649170:intron | 40.0% | |
| CCAGTTACTACCAACTAGTA+TGG | + | chr4_3:55745706-55745725 | None:intergenic | 40.0% | |
| !! | CCATACTAGTTGGTAGTAAC+TGG | - | chr4_3:55745703-55745722 | Msa0649170:intron | 40.0% |
| TAGTTATGTATTGGGGAGTC+CGG | - | chr4_3:55745862-55745881 | Msa0649170:intron | 40.0% | |
| !! | TGTGGTGTTGTGTCTCTTAA+TGG | + | chr4_3:55745925-55745944 | None:intergenic | 40.0% |
| ! | CAAAGCATCATTACTTGGTG+AGG | - | chr4_3:55746172-55746191 | Msa0649170:intron | 40.0% |
| AATGAAGCACAAGCATGTGA+AGG | - | chr4_3:55746224-55746243 | Msa0649170:intron | 40.0% | |
| ! | GCAGATATTGCAACTTTTGG+AGG | - | chr4_3:55746413-55746432 | Msa0649170:CDS | 40.0% |
| GAATACAGACAGTTTCTTGC+TGG | - | chr4_3:55746494-55746513 | Msa0649170:CDS | 40.0% | |
| CAAGTACAGACTTAAGAGCT+TGG | + | chr4_3:55746529-55746548 | None:intergenic | 40.0% | |
| CAAGCTCTTAAGTCTGTACT+TGG | - | chr4_3:55746527-55746546 | Msa0649170:CDS | 40.0% | |
| GGAGATGCTACTGAGAGAAT+TGG | - | chr4_3:55744476-55744495 | Msa0649170:CDS | 45.0% | |
| !!! | TTGGTTTTGGATAGGGAGAG+AGG | - | chr4_3:55744560-55744579 | Msa0649170:CDS | 45.0% |
| !!! | TGGTTTTGGATAGGGAGAGA+GGG | - | chr4_3:55744561-55744580 | Msa0649170:CDS | 45.0% |
| ! | GAGGCACCTGTTAAAATGGA+AGG | - | chr4_3:55744593-55744612 | Msa0649170:CDS | 45.0% |
| AGAATCATAGTGAGGCAGAG+AGG | - | chr4_3:55744657-55744676 | Msa0649170:CDS | 45.0% | |
| ! | ACACTTCGTTGTGTCATTCC+AGG | - | chr4_3:55744713-55744732 | Msa0649170:CDS | 45.0% |
| TGTCATTCCAGGTGCTTTGA+AGG | - | chr4_3:55744724-55744743 | Msa0649170:CDS | 45.0% | |
| ! | GAACTAACCTTCAAAGCACC+TGG | + | chr4_3:55744734-55744753 | None:intergenic | 45.0% |
| GATATTAGTCATCGGCAACG+CGG | + | chr4_3:55745064-55745083 | None:intergenic | 45.0% | |
| AGGGTGATGAAAAGAAGGGT+AGG | - | chr4_3:55745443-55745462 | Msa0649170:intron | 45.0% | |
| !! | TAAGGCTTTGGAGAAGATGC+AGG | + | chr4_3:55745577-55745596 | None:intergenic | 45.0% |
| AGTTATGTATTGGGGAGTCC+GGG | - | chr4_3:55745863-55745882 | Msa0649170:intron | 45.0% | |
| TGTAGTTTCTGACACTCTCC+CGG | + | chr4_3:55745884-55745903 | None:intergenic | 45.0% | |
| TTGAAGAACAAGAGGGAGGT+TGG | - | chr4_3:55746282-55746301 | Msa0649170:intron | 45.0% | |
| GGAGATGCTACTGAGAGAAT+TGG | - | chr4_3:55744476-55744495 | Msa0649170:CDS | 45.0% | |
| !!! | TTGGTTTTGGATAGGGAGAG+AGG | - | chr4_3:55744560-55744579 | Msa0649170:CDS | 45.0% |
| !!! | TGGTTTTGGATAGGGAGAGA+GGG | - | chr4_3:55744561-55744580 | Msa0649170:CDS | 45.0% |
| ! | GAGGCACCTGTTAAAATGGA+AGG | - | chr4_3:55744593-55744612 | Msa0649170:CDS | 45.0% |
| AGAATCATAGTGAGGCAGAG+AGG | - | chr4_3:55744657-55744676 | Msa0649170:CDS | 45.0% | |
| ! | ACACTTCGTTGTGTCATTCC+AGG | - | chr4_3:55744713-55744732 | Msa0649170:CDS | 45.0% |
| TGTCATTCCAGGTGCTTTGA+AGG | - | chr4_3:55744724-55744743 | Msa0649170:CDS | 45.0% | |
| ! | GAACTAACCTTCAAAGCACC+TGG | + | chr4_3:55744734-55744753 | None:intergenic | 45.0% |
| GATATTAGTCATCGGCAACG+CGG | + | chr4_3:55745064-55745083 | None:intergenic | 45.0% | |
| AGGGTGATGAAAAGAAGGGT+AGG | - | chr4_3:55745443-55745462 | Msa0649170:intron | 45.0% | |
| !! | TAAGGCTTTGGAGAAGATGC+AGG | + | chr4_3:55745577-55745596 | None:intergenic | 45.0% |
| AGTTATGTATTGGGGAGTCC+GGG | - | chr4_3:55745863-55745882 | Msa0649170:intron | 45.0% | |
| TGTAGTTTCTGACACTCTCC+CGG | + | chr4_3:55745884-55745903 | None:intergenic | 45.0% | |
| TTGAAGAACAAGAGGGAGGT+TGG | - | chr4_3:55746282-55746301 | Msa0649170:intron | 45.0% | |
| !!! | GGTTTTGGATAGGGAGAGAG+GGG | - | chr4_3:55744562-55744581 | Msa0649170:CDS | 50.0% |
| ATCATAGTGAGGCAGAGAGG+AGG | - | chr4_3:55744660-55744679 | Msa0649170:CDS | 50.0% | |
| GGAGAAGATGCAGGCATACA+TGG | + | chr4_3:55745568-55745587 | None:intergenic | 50.0% | |
| ! | AGCGTTGAAGAACAAGAGGG+AGG | - | chr4_3:55746278-55746297 | Msa0649170:intron | 50.0% |
| GAACAAGAGGGAGGTTGGAA+TGG | - | chr4_3:55746287-55746306 | Msa0649170:intron | 50.0% | |
| !!! | GGTTTTGGATAGGGAGAGAG+GGG | - | chr4_3:55744562-55744581 | Msa0649170:CDS | 50.0% |
| ATCATAGTGAGGCAGAGAGG+AGG | - | chr4_3:55744660-55744679 | Msa0649170:CDS | 50.0% | |
| GGAGAAGATGCAGGCATACA+TGG | + | chr4_3:55745568-55745587 | None:intergenic | 50.0% | |
| ! | AGCGTTGAAGAACAAGAGGG+AGG | - | chr4_3:55746278-55746297 | Msa0649170:intron | 50.0% |
| GAACAAGAGGGAGGTTGGAA+TGG | - | chr4_3:55746287-55746306 | Msa0649170:intron | 50.0% | |
| CAGAGAGGAGGAGAAGAGCT+AGG | - | chr4_3:55744672-55744691 | Msa0649170:CDS | 55.0% | |
| ATTAGTCATCGGCAACGCGG+TGG | + | chr4_3:55745061-55745080 | None:intergenic | 55.0% | |
| CAGAGAGGAGGAGAAGAGCT+AGG | - | chr4_3:55744672-55744691 | Msa0649170:CDS | 55.0% | |
| ATTAGTCATCGGCAACGCGG+TGG | + | chr4_3:55745061-55745080 | None:intergenic | 55.0% | |
| GGAGAGAGGGGAGCTTGTAG+AGG | - | chr4_3:55744574-55744593 | Msa0649170:CDS | 60.0% | |
| AGGAGGGGTGAGCCCACTAA+AGG | + | chr4_3:55745109-55745128 | None:intergenic | 60.0% | |
| GGAGAGAGGGGAGCTTGTAG+AGG | - | chr4_3:55744574-55744593 | Msa0649170:CDS | 60.0% | |
| AGGAGGGGTGAGCCCACTAA+AGG | + | chr4_3:55745109-55745128 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 55744437 | 55746640 | 55744437 | ID=Msa0649170;Name=Msa0649170 |
| chr4_3 | mRNA | 55744437 | 55746640 | 55744437 | ID=Msa0649170-mRNA-1;Parent=Msa0649170;Name=Msa0649170-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0|1|1|1|2|0|260 |
| chr4_3 | exon | 55746332 | 55746640 | 55746332 | ID=Msa0649170-mRNA-1:exon:14353;Parent=Msa0649170-mRNA-1 |
| chr4_3 | exon | 55744437 | 55744910 | 55744437 | ID=Msa0649170-mRNA-1:exon:14352;Parent=Msa0649170-mRNA-1 |
| chr4_3 | CDS | 55746332 | 55746640 | 55746332 | ID=Msa0649170-mRNA-1:cds;Parent=Msa0649170-mRNA-1 |
| chr4_3 | CDS | 55744437 | 55744910 | 55744437 | ID=Msa0649170-mRNA-1:cds;Parent=Msa0649170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
