Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0734250 | XP_003615684.2 | 90.067 | 594 | 11 | 4 | 1 | 546 | 1 | 594 | 0.0 | 1090 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0734250 | sp|Q944C1|PLCD4_ARATH | 58.459 | 597 | 191 | 8 | 1 | 546 | 7 | 597 | 0.0 | 702 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0734250 | G7KE98 | 90.067 | 594 | 11 | 4 | 1 | 546 | 1 | 594 | 0.0 | 1090 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0734250 | 0.809245 | 2.081446e-50 | -8.615850e-47 |
| Msa0001800 | Msa0734250 | 0.807373 | 5.216987e-50 | -8.615850e-47 |
| Msa0002580 | Msa0734250 | 0.815801 | 7.675404e-52 | -8.615850e-47 |
| Msa0016040 | Msa0734250 | 0.800376 | 1.483712e-48 | -8.615850e-47 |
| Msa0017670 | Msa0734250 | 0.813956 | 1.968709e-51 | -8.615850e-47 |
| Msa0017930 | Msa0734250 | 0.826388 | 2.788512e-54 | -8.615850e-47 |
| Msa0029380 | Msa0734250 | 0.811759 | 5.961305e-51 | -8.615850e-47 |
| Msa0030700 | Msa0734250 | 0.809878 | 1.522276e-50 | -8.615850e-47 |
| Msa0033220 | Msa0734250 | 0.809735 | 1.633618e-50 | -8.615850e-47 |
| Msa0035670 | Msa0734250 | 0.812951 | 3.274108e-51 | -8.615850e-47 |
| Msa0038650 | Msa0734250 | -0.829960 | 3.843161e-55 | -8.615850e-47 |
| Msa0042640 | Msa0734250 | 0.863816 | 1.899438e-64 | -8.615850e-47 |
| Msa0044160 | Msa0734250 | 0.816109 | 6.550270e-52 | -8.615850e-47 |
| Msa0048510 | Msa0734250 | 0.858937 | 5.845095e-63 | -8.615850e-47 |
| Msa0057840 | Msa0734250 | 0.830380 | 3.034236e-55 | -8.615850e-47 |
| Msa0065670 | Msa0734250 | -0.801254 | 9.818322e-49 | -8.615850e-47 |
| Msa0077340 | Msa0734250 | 0.872510 | 3.008682e-67 | -8.615850e-47 |
| Msa0077560 | Msa0734250 | 0.858380 | 8.571778e-63 | -8.615850e-47 |
| Msa0078120 | Msa0734250 | 0.802082 | 6.641295e-49 | -8.615850e-47 |
| Msa0089460 | Msa0734250 | 0.824435 | 8.085681e-54 | -8.615850e-47 |
| Msa0094570 | Msa0734250 | 0.816424 | 5.569601e-52 | -8.615850e-47 |
| Msa0094780 | Msa0734250 | 0.839194 | 1.833106e-57 | -8.615850e-47 |
| Msa0094790 | Msa0734250 | 0.832706 | 8.112667e-56 | -8.615850e-47 |
| Msa0098040 | Msa0734250 | 0.818008 | 2.452328e-52 | -8.615850e-47 |
| Msa0098070 | Msa0734250 | 0.808216 | 3.453623e-50 | -8.615850e-47 |
| Msa0102240 | Msa0734250 | 0.883761 | 3.412748e-71 | -8.615850e-47 |
| Msa0111110 | Msa0734250 | -0.803486 | 3.407773e-49 | -8.615850e-47 |
| Msa0607800 | Msa0734250 | 0.800236 | 1.584143e-48 | -8.615850e-47 |
| Msa0610700 | Msa0734250 | -0.836255 | 1.041602e-56 | -8.615850e-47 |
| Msa0611210 | Msa0734250 | 0.801916 | 7.183753e-49 | -8.615850e-47 |
| Msa0612350 | Msa0734250 | 0.805378 | 1.373848e-49 | -8.615850e-47 |
| Msa0624900 | Msa0734250 | 0.814227 | 1.714981e-51 | -8.615850e-47 |
| Msa0630770 | Msa0734250 | -0.817467 | 3.248555e-52 | -8.615850e-47 |
| Msa0649170 | Msa0734250 | 0.805335 | 1.403202e-49 | -8.615850e-47 |
| Msa0652770 | Msa0734250 | 0.805685 | 1.184626e-49 | -8.615850e-47 |
| Msa0657720 | Msa0734250 | 0.817597 | 3.036462e-52 | -8.615850e-47 |
| Msa0662820 | Msa0734250 | 0.829245 | 5.735384e-55 | -8.615850e-47 |
| Msa0662980 | Msa0734250 | 0.804937 | 1.699214e-49 | -8.615850e-47 |
| Msa0666700 | Msa0734250 | 0.819469 | 1.142684e-52 | -8.615850e-47 |
| Msa0674480 | Msa0734250 | 0.862414 | 5.153828e-64 | -8.615850e-47 |
| Msa0674560 | Msa0734250 | 0.822919 | 1.830691e-53 | -8.615850e-47 |
| Msa0678380 | Msa0734250 | 0.811572 | 6.547184e-51 | -8.615850e-47 |
| Msa0693340 | Msa0734250 | -0.861266 | 1.157493e-63 | -8.615850e-47 |
| Msa0702790 | Msa0734250 | 0.813709 | 2.231333e-51 | -8.615850e-47 |
| Msa0703950 | Msa0734250 | 0.806774 | 6.987371e-50 | -8.615850e-47 |
| Msa0709440 | Msa0734250 | 0.831988 | 1.221386e-55 | -8.615850e-47 |
| Msa0716890 | Msa0734250 | 0.861932 | 7.247943e-64 | -8.615850e-47 |
| Msa0719270 | Msa0734250 | 0.830470 | 2.884337e-55 | -8.615850e-47 |
| Msa0720410 | Msa0734250 | 0.819936 | 8.939274e-53 | -8.615850e-47 |
| Msa0722890 | Msa0734250 | 0.811850 | 5.696547e-51 | -8.615850e-47 |
| Msa0723090 | Msa0734250 | 0.827348 | 1.644143e-54 | -8.615850e-47 |
| Msa0733010 | Msa0734250 | 0.800577 | 1.349889e-48 | -8.615850e-47 |
| Msa0734250 | Msa0740710 | 0.807345 | 5.289507e-50 | -8.615850e-47 |
| Msa0734250 | Msa0745140 | 0.833358 | 5.583135e-56 | -8.615850e-47 |
| Msa0734250 | Msa0752450 | 0.809382 | 1.944884e-50 | -8.615850e-47 |
| Msa0734250 | Msa0754430 | 0.828960 | 6.722253e-55 | -8.615850e-47 |
| Msa0734250 | Msa0754450 | 0.833087 | 6.524030e-56 | -8.615850e-47 |
| Msa0734250 | Msa0758030 | 0.802858 | 4.596203e-49 | -8.615850e-47 |
| Msa0734250 | Msa0760970 | 0.815943 | 7.133906e-52 | -8.615850e-47 |
| Msa0734250 | Msa0769300 | 0.817217 | 3.697761e-52 | -8.615850e-47 |
| Msa0734250 | Msa0773630 | 0.809526 | 1.811681e-50 | -8.615850e-47 |
| Msa0734250 | Msa0773990 | 0.809632 | 1.719466e-50 | -8.615850e-47 |
| Msa0734250 | Msa0775660 | 0.829334 | 5.456478e-55 | -8.615850e-47 |
| Msa0734250 | Msa0776640 | 0.833715 | 4.546985e-56 | -8.615850e-47 |
| Msa0734250 | Msa0780910 | 0.808990 | 2.360713e-50 | -8.615850e-47 |
| Msa0734250 | Msa0792370 | 0.814889 | 1.224289e-51 | -8.615850e-47 |
| Msa0734250 | Msa0795750 | 0.843398 | 1.435767e-58 | -8.615850e-47 |
| Msa0734250 | Msa0795870 | 0.801644 | 8.169967e-49 | -8.615850e-47 |
| Msa0734250 | Msa0803250 | 0.814892 | 1.221951e-51 | -8.615850e-47 |
| Msa0734250 | Msa0804000 | 0.802082 | 6.641284e-49 | -8.615850e-47 |
| Msa0734250 | Msa0813160 | 0.916826 | 1.115179e-85 | -8.615850e-47 |
| Msa0734250 | Msa0815970 | 0.844907 | 5.651553e-59 | -8.615850e-47 |
| Msa0734250 | Msa0825920 | 0.823610 | 1.262619e-53 | -8.615850e-47 |
| Msa0734250 | Msa0828950 | 0.810386 | 1.182818e-50 | -8.615850e-47 |
| Msa0734250 | Msa0828970 | 0.802318 | 5.937888e-49 | -8.615850e-47 |
| Msa0734250 | Msa0833530 | 0.833557 | 4.980457e-56 | -8.615850e-47 |
| Msa0734250 | Msa0833650 | 0.804261 | 2.351305e-49 | -8.615850e-47 |
| Msa0734250 | Msa0838620 | -0.800512 | 1.392101e-48 | -8.615850e-47 |
| Msa0734250 | Msa0840520 | 0.827431 | 1.570802e-54 | -8.615850e-47 |
| Msa0734250 | Msa0841590 | 0.818890 | 1.547765e-52 | -8.615850e-47 |
| Msa0734250 | Msa0842070 | 0.810943 | 8.962628e-51 | -8.615850e-47 |
| Msa0734250 | Msa0853200 | -0.814896 | 1.219557e-51 | -8.615850e-47 |
| Msa0734250 | Msa0853590 | 0.872252 | 3.668746e-67 | -8.615850e-47 |
| Msa0734250 | Msa0863620 | 0.806848 | 6.739376e-50 | -8.615850e-47 |
| Msa0734250 | Msa0865420 | 0.842740 | 2.150158e-58 | -8.615850e-47 |
| Msa0734250 | Msa0865450 | 0.822568 | 2.210057e-53 | -8.615850e-47 |
| Msa0734250 | Msa0869930 | 0.809035 | 2.308342e-50 | -8.615850e-47 |
| Msa0734250 | Msa0870460 | -0.813247 | 2.819567e-51 | -8.615850e-47 |
| Msa0734250 | Msa0878280 | 0.800728 | 1.257748e-48 | -8.615850e-47 |
| Msa0734250 | Msa0879930 | 0.805251 | 1.461228e-49 | -8.615850e-47 |
| Msa0734250 | Msa0902360 | 0.802949 | 4.401292e-49 | -8.615850e-47 |
| Msa0734250 | Msa0935740 | 0.818639 | 1.765077e-52 | -8.615850e-47 |
| Msa0734250 | Msa0945030 | 0.856763 | 2.581375e-62 | -8.615850e-47 |
| Msa0734250 | Msa0945190 | 0.800246 | 1.577180e-48 | -8.615850e-47 |
| Msa0734250 | Msa0972740 | 0.802798 | 4.727593e-49 | -8.615850e-47 |
| Msa0734250 | Msa1022420 | 0.838082 | 3.551742e-57 | -8.615850e-47 |
| Msa0734250 | Msa1031410 | 0.802878 | 4.550947e-49 | -8.615850e-47 |
| Msa0734250 | Msa1034850 | 0.802462 | 5.547267e-49 | -8.615850e-47 |
| Msa0734250 | Msa1044250 | 0.861559 | 9.424927e-64 | -8.615850e-47 |
| Msa0734250 | Msa1071180 | -0.815287 | 9.988743e-52 | -8.615850e-47 |
| Msa0734250 | Msa1072940 | 0.834460 | 2.960167e-56 | -8.615850e-47 |
| Msa0734250 | Msa1074890 | 0.872604 | 2.799810e-67 | -8.615850e-47 |
| Msa0734250 | Msa1074900 | 0.820073 | 8.317829e-53 | -8.615850e-47 |
| Msa0734250 | Msa1082410 | 0.840436 | 8.703889e-58 | -8.615850e-47 |
| Msa0734250 | Msa1084530 | 0.827640 | 1.399512e-54 | -8.615850e-47 |
| Msa0734250 | Msa1084640 | 0.800941 | 1.137667e-48 | -8.615850e-47 |
| Msa0734250 | Msa1092310 | 0.826062 | 3.332880e-54 | -8.615850e-47 |
| Msa0734250 | Msa1101160 | 0.802715 | 4.918055e-49 | -8.615850e-47 |
| Msa0734250 | Msa1106590 | 0.877780 | 4.776439e-69 | -8.615850e-47 |
| Msa0734250 | Msa1111380 | 0.804801 | 1.814627e-49 | -8.615850e-47 |
| Msa0734250 | Msa1115740 | 0.863184 | 2.982669e-64 | -8.615850e-47 |
| Msa0734250 | Msa1125820 | 0.827552 | 1.468761e-54 | -8.615850e-47 |
| Msa0734250 | Msa1125990 | 0.831579 | 1.541162e-55 | -8.615850e-47 |
| Msa0734250 | Msa1129330 | 0.803190 | 3.922987e-49 | -8.615850e-47 |
| Msa0734250 | Msa1130060 | 0.846928 | 1.595562e-59 | -8.615850e-47 |
| Msa0734250 | Msa1132840 | 0.800325 | 1.519785e-48 | -8.615850e-47 |
| Msa0734250 | Msa1143370 | -0.803019 | 4.257034e-49 | -8.615850e-47 |
| Msa0734250 | Msa1149910 | 0.837300 | 5.637663e-57 | -8.615850e-47 |
| Msa0734250 | Msa1155170 | -0.817484 | 3.219982e-52 | -8.615850e-47 |
| Msa0734250 | Msa1156720 | 0.806439 | 8.221802e-50 | -8.615850e-47 |
| Msa0734250 | Msa1160920 | 0.830089 | 3.574221e-55 | -8.615850e-47 |
| Msa0734250 | Msa1162230 | 0.816093 | 6.605000e-52 | -8.615850e-47 |
| Msa0734250 | Msa1162240 | 0.854650 | 1.068588e-61 | -8.615850e-47 |
| Msa0734250 | Msa1165090 | 0.822431 | 2.378002e-53 | -8.615850e-47 |
| Msa0734250 | Msa1171290 | 0.832365 | 9.856552e-56 | -8.615850e-47 |
| Msa0734250 | Msa1173250 | 0.800690 | 1.280185e-48 | -8.615850e-47 |
| Msa0734250 | Msa1175990 | 0.820958 | 5.210491e-53 | -8.615850e-47 |
| Msa0734250 | Msa1184120 | 0.815077 | 1.111882e-51 | -8.615850e-47 |
| Msa0734250 | Msa1184890 | 0.855056 | 8.149804e-62 | -8.615850e-47 |
| Msa0734250 | Msa1190180 | 0.821535 | 3.835333e-53 | -8.615850e-47 |
| Msa0734250 | Msa1192560 | 0.845280 | 4.482262e-59 | -8.615850e-47 |
| Msa0734250 | Msa1192570 | 0.828788 | 7.401220e-55 | -8.615850e-47 |
| Msa0734250 | Msa1192590 | 0.839569 | 1.465501e-57 | -8.615850e-47 |
| Msa0734250 | Msa1207330 | 0.809813 | 1.571579e-50 | -8.615850e-47 |
| Msa0734250 | Msa1208950 | 0.820083 | 8.270612e-53 | -8.615850e-47 |
| Msa0734250 | Msa1219830 | 0.815286 | 9.991969e-52 | -8.615850e-47 |
| Msa0734250 | Msa1225860 | -0.823834 | 1.118699e-53 | -8.615850e-47 |
| Msa0734250 | Msa1228580 | 0.828125 | 1.069460e-54 | -8.615850e-47 |
| Msa0734250 | Msa1240450 | 0.808381 | 3.185648e-50 | -8.615850e-47 |
| Msa0734250 | Msa1258000 | 0.821429 | 4.056860e-53 | -8.615850e-47 |
| Msa0734250 | Msa1265450 | 0.802395 | 5.726065e-49 | -8.615850e-47 |
| Msa0734250 | Msa1265650 | 0.816823 | 4.533534e-52 | -8.615850e-47 |
| Msa0734250 | Msa1278970 | -0.800406 | 1.463059e-48 | -8.615850e-47 |
| Msa0734250 | Msa1279120 | 0.800313 | 1.528071e-48 | -8.615850e-47 |
| Msa0734250 | Msa1290380 | 0.828373 | 9.318790e-55 | -8.615850e-47 |
| Msa0734250 | Msa1290440 | 0.828904 | 6.936116e-55 | -8.615850e-47 |
| Msa0734250 | Msa1295480 | -0.809273 | 2.052582e-50 | -8.615850e-47 |
| Msa0734250 | Msa1303560 | 0.816666 | 4.917470e-52 | -8.615850e-47 |
| Msa0734250 | Msa1303650 | 0.814157 | 1.777488e-51 | -8.615850e-47 |
| Msa0734250 | Msa1338540 | 0.820710 | 5.941638e-53 | -8.615850e-47 |
| Msa0734250 | Msa1340200 | 0.816720 | 4.781441e-52 | -8.615850e-47 |
| Msa0734250 | Msa1341840 | 0.828376 | 9.304323e-55 | -8.615850e-47 |
| Msa0734250 | Msa1348170 | -0.837610 | 4.696003e-57 | -8.615850e-47 |
| Msa0734250 | Msa1356600 | -0.865615 | 5.193574e-65 | -8.615850e-47 |
| Msa0734250 | Msa1365820 | 0.848971 | 4.361549e-60 | -8.615850e-47 |
| Msa0734250 | Msa1366150 | 0.831159 | 1.954980e-55 | -8.615850e-47 |
| Msa0734250 | Msa1368390 | 0.853397 | 2.455641e-61 | -8.615850e-47 |
| Msa0734250 | Msa1368750 | 0.808198 | 3.484531e-50 | -8.615850e-47 |
| Msa0734250 | Msa1372040 | 0.821398 | 4.123499e-53 | -8.615850e-47 |
| Msa0734250 | Msa1374790 | 0.802078 | 6.652541e-49 | -8.615850e-47 |
| Msa0734250 | Msa1382300 | 0.827756 | 1.312537e-54 | -8.615850e-47 |
| Msa0734250 | Msa1384150 | 0.848532 | 5.774098e-60 | -8.615850e-47 |
| Msa0734250 | Msa1387440 | 0.833829 | 4.259525e-56 | -8.615850e-47 |
| Msa0734250 | Msa1389900 | 0.805212 | 1.488565e-49 | -8.615850e-47 |
| Msa0734250 | Msa1391500 | 0.841509 | 4.552622e-58 | -8.615850e-47 |
| Msa0734250 | Msa1392580 | 0.804794 | 1.820282e-49 | -8.615850e-47 |
| Msa0734250 | Msa1395430 | -0.802410 | 5.685090e-49 | -8.615850e-47 |
| Msa0734250 | Msa1398810 | 0.830584 | 2.705114e-55 | -8.615850e-47 |
| Msa0734250 | Msa1401670 | 0.817419 | 3.329889e-52 | -8.615850e-47 |
| Msa0734250 | Msa1403710 | 0.801977 | 6.978773e-49 | -8.615850e-47 |
| Msa0734250 | Msa1405460 | 0.860454 | 2.042809e-63 | -8.615850e-47 |
| Msa0734250 | Msa1407840 | 0.838286 | 3.146810e-57 | -8.615850e-47 |
| Msa0734250 | Msa1412000 | 0.804472 | 2.125057e-49 | -8.615850e-47 |
| Msa0734250 | Msa1413130 | 0.844038 | 9.684083e-59 | -8.615850e-47 |
| Msa0734250 | Msa1415540 | 0.833316 | 5.719676e-56 | -8.615850e-47 |
| Msa0734250 | Msa1417370 | 0.819931 | 8.959735e-53 | -8.615850e-47 |
| Msa0734250 | Msa1417380 | 0.846901 | 1.623327e-59 | -8.615850e-47 |
| Msa0734250 | Msa1418080 | 0.831925 | 1.266140e-55 | -8.615850e-47 |
| Msa0734250 | Msa1428230 | -0.801321 | 9.516535e-49 | -8.615850e-47 |
| Msa0734250 | Msa1429070 | 0.846180 | 2.554428e-59 | -8.615850e-47 |
| Msa0734250 | Msa1434220 | 0.841544 | 4.454785e-58 | -8.615850e-47 |
| Msa0734250 | Msa1435960 | 0.839659 | 1.387817e-57 | -8.615850e-47 |
| Msa0734250 | Msa1436620 | 0.825122 | 5.566877e-54 | -8.615850e-47 |
| Msa0734250 | Msa1437810 | 0.834749 | 2.504036e-56 | -8.615850e-47 |
| Msa0734250 | Msa1439650 | 0.806788 | 6.940277e-50 | -8.615850e-47 |
| Msa0734250 | Msa1445910 | -0.808790 | 2.604708e-50 | -8.615850e-47 |
| Msa0734250 | Msa1450190 | 0.813153 | 2.956540e-51 | -8.615850e-47 |
| Msa0734250 | Msa1451820 | 0.804770 | 1.841396e-49 | -8.615850e-47 |
| Msa0734250 | Msa1454500 | 0.808605 | 2.852861e-50 | -8.615850e-47 |
| Msa0734250 | Msa1457770 | 0.813222 | 2.854851e-51 | -8.615850e-47 |
| Msa0734250 | Msa1459360 | 0.806675 | 7.330593e-50 | -8.615850e-47 |
| Msa0734250 | Msa1461370 | 0.809640 | 1.711970e-50 | -8.615850e-47 |
| Msa0734250 | Msa1464090 | 0.841156 | 5.637740e-58 | -8.615850e-47 |
| Msa0122330 | Msa0734250 | 0.804677 | 1.926239e-49 | -8.615850e-47 |
| Msa0123070 | Msa0734250 | 0.807758 | 4.322847e-50 | -8.615850e-47 |
| Msa0124910 | Msa0734250 | 0.800076 | 1.707383e-48 | -8.615850e-47 |
| Msa0125360 | Msa0734250 | 0.853211 | 2.776539e-61 | -8.615850e-47 |
| Msa0140130 | Msa0734250 | 0.804152 | 2.477340e-49 | -8.615850e-47 |
| Msa0142430 | Msa0734250 | 0.836224 | 1.060465e-56 | -8.615850e-47 |
| Msa0143670 | Msa0734250 | 0.800823 | 1.202778e-48 | -8.615850e-47 |
| Msa0146930 | Msa0734250 | 0.819970 | 8.778015e-53 | -8.615850e-47 |
| Msa0169410 | Msa0734250 | 0.808390 | 3.171157e-50 | -8.615850e-47 |
| Msa0178450 | Msa0734250 | 0.840857 | 6.754522e-58 | -8.615850e-47 |
| Msa0183710 | Msa0734250 | 0.801581 | 8.416133e-49 | -8.615850e-47 |
| Msa0187540 | Msa0734250 | 0.801159 | 1.026896e-48 | -8.615850e-47 |
| Msa0198990 | Msa0734250 | 0.820291 | 7.411112e-53 | -8.615850e-47 |
| Msa0204950 | Msa0734250 | 0.843730 | 1.170579e-58 | -8.615850e-47 |
| Msa0213030 | Msa0734250 | 0.803393 | 3.561909e-49 | -8.615850e-47 |
| Msa0225190 | Msa0734250 | -0.803163 | 3.975191e-49 | -8.615850e-47 |
| Msa0231600 | Msa0734250 | 0.800958 | 1.128954e-48 | -8.615850e-47 |
| Msa0235290 | Msa0734250 | 0.877009 | 8.860169e-69 | -8.615850e-47 |
| Msa0365210 | Msa0734250 | 0.843428 | 1.409980e-58 | -8.615850e-47 |
| Msa0367690 | Msa0734250 | 0.808649 | 2.791404e-50 | -8.615850e-47 |
| Msa0369420 | Msa0734250 | 0.812229 | 4.710169e-51 | -8.615850e-47 |
| Msa0369470 | Msa0734250 | 0.807312 | 5.376004e-50 | -8.615850e-47 |
| Msa0369790 | Msa0734250 | 0.822742 | 2.012966e-53 | -8.615850e-47 |
| Msa0373500 | Msa0734250 | 0.803227 | 3.854997e-49 | -8.615850e-47 |
| Msa0375330 | Msa0734250 | -0.840145 | 1.037358e-57 | -8.615850e-47 |
| Msa0383000 | Msa0734250 | 0.804571 | 2.026178e-49 | -8.615850e-47 |
| Msa0386810 | Msa0734250 | 0.807041 | 6.135341e-50 | -8.615850e-47 |
| Msa0386880 | Msa0734250 | 0.819196 | 1.318653e-52 | -8.615850e-47 |
| Msa0408380 | Msa0734250 | 0.828556 | 8.420437e-55 | -8.615850e-47 |
| Msa0409830 | Msa0734250 | 0.836358 | 9.807351e-57 | -8.615850e-47 |
| Msa0412790 | Msa0734250 | 0.865497 | 5.656157e-65 | -8.615850e-47 |
| Msa0416110 | Msa0734250 | 0.803600 | 3.226999e-49 | -8.615850e-47 |
| Msa0432010 | Msa0734250 | 0.810084 | 1.374365e-50 | -8.615850e-47 |
| Msa0436330 | Msa0734250 | 0.813424 | 2.577863e-51 | -8.615850e-47 |
| Msa0436910 | Msa0734250 | 0.814178 | 1.758946e-51 | -8.615850e-47 |
| Msa0437520 | Msa0734250 | 0.800084 | 1.700967e-48 | -8.615850e-47 |
| Msa0440350 | Msa0734250 | 0.806954 | 6.399089e-50 | -8.615850e-47 |
| Msa0454560 | Msa0734250 | 0.811291 | 7.536229e-51 | -8.615850e-47 |
| Msa0457560 | Msa0734250 | 0.856909 | 2.339123e-62 | -8.615850e-47 |
| Msa0457570 | Msa0734250 | 0.834340 | 3.172118e-56 | -8.615850e-47 |
| Msa0464000 | Msa0734250 | 0.823317 | 1.478542e-53 | -8.615850e-47 |
| Msa0467170 | Msa0734250 | 0.819387 | 1.192812e-52 | -8.615850e-47 |
| Msa0467330 | Msa0734250 | 0.831266 | 1.839888e-55 | -8.615850e-47 |
| Msa0481630 | Msa0734250 | 0.801235 | 9.909215e-49 | -8.615850e-47 |
| Msa0481890 | Msa0734250 | 0.826419 | 2.741420e-54 | -8.615850e-47 |
| Msa0241750 | Msa0734250 | 0.822846 | 1.903983e-53 | -8.615850e-47 |
| Msa0242590 | Msa0734250 | 0.803921 | 2.768168e-49 | -8.615850e-47 |
| Msa0244640 | Msa0734250 | 0.808473 | 3.044865e-50 | -8.615850e-47 |
| Msa0244890 | Msa0734250 | 0.818166 | 2.259226e-52 | -8.615850e-47 |
| Msa0244900 | Msa0734250 | 0.810510 | 1.112350e-50 | -8.615850e-47 |
| Msa0249850 | Msa0734250 | 0.826115 | 3.237587e-54 | -8.615850e-47 |
| Msa0263230 | Msa0734250 | 0.842807 | 2.063309e-58 | -8.615850e-47 |
| Msa0269210 | Msa0734250 | 0.856028 | 4.244085e-62 | -8.615850e-47 |
| Msa0281470 | Msa0734250 | 0.850819 | 1.327222e-60 | -8.615850e-47 |
| Msa0284800 | Msa0734250 | 0.813280 | 2.773191e-51 | -8.615850e-47 |
| Msa0288620 | Msa0734250 | 0.826863 | 2.147698e-54 | -8.615850e-47 |
| Msa0298470 | Msa0734250 | 0.808987 | 2.364225e-50 | -8.615850e-47 |
| Msa0298980 | Msa0734250 | 0.800605 | 1.332808e-48 | -8.615850e-47 |
| Msa0300840 | Msa0734250 | 0.853985 | 1.663073e-61 | -8.615850e-47 |
| Msa0307270 | Msa0734250 | 0.830944 | 2.207625e-55 | -8.615850e-47 |
| Msa0307670 | Msa0734250 | 0.821697 | 3.517527e-53 | -8.615850e-47 |
| Msa0313900 | Msa0734250 | 0.878904 | 1.924063e-69 | -8.615850e-47 |
| Msa0320500 | Msa0734250 | 0.801489 | 8.790001e-49 | -8.615850e-47 |
| Msa0320600 | Msa0734250 | 0.838340 | 3.047111e-57 | -8.615850e-47 |
| Msa0326710 | Msa0734250 | 0.801800 | 7.590189e-49 | -8.615850e-47 |
| Msa0330520 | Msa0734250 | 0.826992 | 2.000455e-54 | -8.615850e-47 |
| Msa0331970 | Msa0734250 | 0.808256 | 3.387147e-50 | -8.615850e-47 |
| Msa0333610 | Msa0734250 | 0.804338 | 2.266584e-49 | -8.615850e-47 |
| Msa0338340 | Msa0734250 | 0.854337 | 1.316224e-61 | -8.615850e-47 |
| Msa0354840 | Msa0734250 | 0.805361 | 1.385194e-49 | -8.615850e-47 |
| Msa0361910 | Msa0734250 | 0.849110 | 3.990298e-60 | -8.615850e-47 |
| Msa0483100 | Msa0734250 | 0.800225 | 1.592760e-48 | -8.615850e-47 |
| Msa0501440 | Msa0734250 | 0.808651 | 2.788807e-50 | -8.615850e-47 |
| Msa0502510 | Msa0734250 | 0.837545 | 4.881027e-57 | -8.615850e-47 |
| Msa0509550 | Msa0734250 | 0.823685 | 1.212283e-53 | -8.615850e-47 |
| Msa0513970 | Msa0734250 | 0.847215 | 1.331487e-59 | -8.615850e-47 |
| Msa0519750 | Msa0734250 | 0.806172 | 9.360270e-50 | -8.615850e-47 |
| Msa0519760 | Msa0734250 | 0.800079 | 1.705617e-48 | -8.615850e-47 |
| Msa0519820 | Msa0734250 | 0.818588 | 1.812545e-52 | -8.615850e-47 |
| Msa0519830 | Msa0734250 | 0.800801 | 1.215427e-48 | -8.615850e-47 |
| Msa0523490 | Msa0734250 | -0.822436 | 2.371591e-53 | -8.615850e-47 |
| Msa0525880 | Msa0734250 | 0.803918 | 2.771109e-49 | -8.615850e-47 |
| Msa0528570 | Msa0734250 | 0.835261 | 1.859437e-56 | -8.615850e-47 |
| Msa0529030 | Msa0734250 | 0.856625 | 2.835552e-62 | -8.615850e-47 |
| Msa0531960 | Msa0734250 | 0.802629 | 5.123045e-49 | -8.615850e-47 |
| Msa0534720 | Msa0734250 | 0.823388 | 1.422628e-53 | -8.615850e-47 |
| Msa0543560 | Msa0734250 | 0.812273 | 4.605905e-51 | -8.615850e-47 |
| Msa0555220 | Msa0734250 | 0.800095 | 1.692245e-48 | -8.615850e-47 |
| Msa0555860 | Msa0734250 | -0.812736 | 3.649168e-51 | -8.615850e-47 |
| Msa0559650 | Msa0734250 | -0.826823 | 2.195506e-54 | -8.615850e-47 |
| Msa0566280 | Msa0734250 | 0.803984 | 2.685217e-49 | -8.615850e-47 |
| Msa0567380 | Msa0734250 | 0.825786 | 3.876348e-54 | -8.615850e-47 |
| Msa0572780 | Msa0734250 | 0.800333 | 1.514247e-48 | -8.615850e-47 |
| Msa0574900 | Msa0734250 | 0.844312 | 8.171152e-59 | -8.615850e-47 |
| Msa0579070 | Msa0734250 | -0.834772 | 2.470402e-56 | -8.615850e-47 |
| Msa0580810 | Msa0734250 | 0.811813 | 5.801186e-51 | -8.615850e-47 |
| Msa0583360 | Msa0734250 | -0.824474 | 7.915821e-54 | -8.615850e-47 |
| Msa0591650 | Msa0734250 | 0.812684 | 3.745538e-51 | -8.615850e-47 |
| Msa0596840 | Msa0734250 | 0.808573 | 2.898818e-50 | -8.615850e-47 |
| Msa0599420 | Msa0734250 | 0.803438 | 3.486553e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0734250 | MtrunA17_Chr5g0430181 | 90.067 | 594 | 11 | 4 | 1 | 546 | 1 | 594 | 0.0 | 1090 |
| Msa0734250 | MtrunA17_Chr5g0437081 | 57.143 | 595 | 192 | 10 | 3 | 545 | 5 | 588 | 0.0 | 679 |
| Msa0734250 | MtrunA17_Chr3g0113531 | 57.576 | 594 | 193 | 8 | 3 | 546 | 9 | 593 | 0.0 | 669 |
| Msa0734250 | MtrunA17_Chr3g0112551 | 55.518 | 589 | 192 | 9 | 10 | 546 | 2 | 572 | 0.0 | 624 |
| Msa0734250 | MtrunA17_Chr5g0437041 | 50.250 | 599 | 238 | 10 | 4 | 545 | 11 | 606 | 0.0 | 568 |
| Msa0734250 | MtrunA17_Chr5g0437061 | 56.773 | 502 | 138 | 7 | 112 | 545 | 1 | 491 | 0.0 | 560 |
| Msa0734250 | MtrunA17_Chr3g0113521 | 50.970 | 567 | 226 | 11 | 24 | 545 | 27 | 586 | 0.0 | 547 |
| Msa0734250 | MtrunA17_Chr3g0113471 | 49.736 | 569 | 232 | 10 | 22 | 543 | 24 | 585 | 0.0 | 537 |
| Msa0734250 | MtrunA17_Chr5g0430191 | 49.914 | 583 | 221 | 13 | 4 | 545 | 20 | 572 | 1.51e-178 | 515 |
| Msa0734250 | MtrunA17_Chr5g0437051 | 37.000 | 100 | 56 | 2 | 14 | 108 | 11 | 108 | 3.97e-15 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0734250 | AT5G58700.3 | 58.459 | 597 | 191 | 8 | 1 | 546 | 7 | 597 | 0.0 | 702 |
| Msa0734250 | AT5G58700.1 | 58.459 | 597 | 191 | 8 | 1 | 546 | 7 | 597 | 0.0 | 702 |
| Msa0734250 | AT2G40116.1 | 55.740 | 601 | 202 | 8 | 3 | 545 | 18 | 612 | 0.0 | 664 |
| Msa0734250 | AT3G08510.2 | 57.336 | 593 | 188 | 12 | 3 | 546 | 5 | 581 | 0.0 | 652 |
| Msa0734250 | AT3G08510.1 | 57.336 | 593 | 188 | 12 | 3 | 546 | 5 | 581 | 0.0 | 652 |
| Msa0734250 | AT5G58690.3 | 54.300 | 593 | 205 | 8 | 1 | 546 | 5 | 578 | 0.0 | 632 |
| Msa0734250 | AT5G58690.1 | 54.300 | 593 | 205 | 8 | 1 | 546 | 5 | 578 | 0.0 | 632 |
| Msa0734250 | AT3G55940.1 | 54.606 | 597 | 201 | 10 | 3 | 546 | 5 | 584 | 0.0 | 624 |
| Msa0734250 | AT5G58690.2 | 55.130 | 575 | 192 | 8 | 19 | 546 | 4 | 559 | 0.0 | 619 |
| Msa0734250 | AT3G08510.4 | 56.207 | 580 | 186 | 12 | 3 | 546 | 5 | 552 | 0.0 | 608 |
| Msa0734250 | AT3G08510.3 | 56.207 | 580 | 186 | 12 | 3 | 546 | 5 | 552 | 0.0 | 608 |
| Msa0734250 | AT5G58700.2 | 61.020 | 490 | 136 | 7 | 108 | 546 | 4 | 489 | 0.0 | 588 |
| Msa0734250 | AT5G58670.1 | 46.655 | 583 | 239 | 9 | 3 | 543 | 4 | 556 | 2.01e-176 | 509 |
| Msa0734250 | AT4G38530.1 | 45.719 | 584 | 242 | 13 | 3 | 543 | 4 | 555 | 1.27e-167 | 487 |
| Msa0734250 | AT3G47290.1 | 39.543 | 569 | 266 | 14 | 12 | 545 | 5 | 530 | 6.33e-125 | 377 |
| Msa0734250 | AT3G47290.2 | 39.241 | 553 | 260 | 12 | 12 | 530 | 5 | 515 | 1.61e-120 | 367 |
| Msa0734250 | AT3G47220.1 | 39.378 | 579 | 260 | 17 | 8 | 545 | 2 | 530 | 4.83e-118 | 359 |
Find 141 sgRNAs with CRISPR-Local
Find 393 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTGAATACCTCATTATT+TGG | 0.164810 | 5_1:-47977312 | None:intergenic |
| CTATTCAATGCCTTTATAAT+AGG | 0.216634 | 5_1:-47974871 | None:intergenic |
| AACATCATCTTTGGTGGAAT+TGG | 0.217676 | 5_1:-47974926 | None:intergenic |
| ATAGAGTCTGCGTGTGTTTC+CGG | 0.231285 | 5_1:+47973435 | Msa0734250:CDS |
| GCAAGTTCAGGCACAGTTAA+AGG | 0.238776 | 5_1:-47978983 | None:intergenic |
| AGAATTCTCCCTCACACTTT+TGG | 0.243883 | 5_1:-47976253 | None:intergenic |
| AAAGGTCATTCACAATTATA+TGG | 0.245702 | 5_1:+47973406 | Msa0734250:exon |
| TTCACTTCCAATTTCTCTTT+AGG | 0.250169 | 5_1:-47977333 | None:intergenic |
| ATTCAATCCTAAAGAGAAAT+TGG | 0.256052 | 5_1:+47977326 | Msa0734250:CDS |
| AAGGTTTCTTGTGGAGGTTC+AGG | 0.263773 | 5_1:+47973559 | Msa0734250:CDS |
| AGCGAATGCATGTTCCTTAA+TGG | 0.270928 | 5_1:-47975761 | None:intergenic |
| CAAATGTTTGAAATCCATTA+AGG | 0.273167 | 5_1:+47975747 | Msa0734250:CDS |
| GACCAGTATATATGAAATAA+TGG | 0.273183 | 5_1:-47974798 | None:intergenic |
| TTGGAATTTAAGTACTCTTT+TGG | 0.290635 | 5_1:-47976234 | None:intergenic |
| TCCTCATTGATGAATAAATA+TGG | 0.304877 | 5_1:-47973271 | None:intergenic |
| ATCCTATACTTCAGTTCTTC+AGG | 0.310159 | 5_1:-47976192 | None:intergenic |
| CAAAGACAATAGAGGATAAC+TGG | 0.310479 | 5_1:+47978930 | Msa0734250:CDS |
| TCCCATTATTTCATATATAC+TGG | 0.316971 | 5_1:+47974796 | Msa0734250:CDS |
| CAGTGGCACCTCAGGAAGTC+AGG | 0.328687 | 5_1:+47973480 | Msa0734250:CDS |
| GAGCTTGTTCACTTAAACTA+AGG | 0.337156 | 5_1:-47976764 | None:intergenic |
| CAACCCTCCTATTAGATCTA+AGG | 0.337822 | 5_1:+47973724 | Msa0734250:CDS |
| TAGATGATTACTCAAACATT+TGG | 0.350901 | 5_1:+47976120 | Msa0734250:intron |
| CGGAGAGGCAGTGGCACCTC+AGG | 0.357230 | 5_1:+47973472 | Msa0734250:CDS |
| TAGTGATGTTCCTATTATAA+AGG | 0.358842 | 5_1:+47974861 | Msa0734250:CDS |
| AGGGATATGGCAGAAATCTT+TGG | 0.368466 | 5_1:+47977214 | Msa0734250:CDS |
| TAAAACAAGAACATCATCTT+TGG | 0.382673 | 5_1:-47974935 | None:intergenic |
| ACATCATCTTTGGTGGAATT+GGG | 0.394799 | 5_1:-47974925 | None:intergenic |
| TTGTCTAATTCAGGTTCATC+AGG | 0.403387 | 5_1:+47974756 | Msa0734250:intron |
| TAGTTGATTTCCAGTGAGAT+AGG | 0.403546 | 5_1:-47974827 | None:intergenic |
| GCATTCAATATGCAGGGATA+TGG | 0.403576 | 5_1:+47977201 | Msa0734250:CDS |
| TGTGGGAGATGGATGGAGTA+TGG | 0.405885 | 5_1:+47977460 | Msa0734250:CDS |
| AGAAAACACTTTCATGATCT+AGG | 0.408119 | 5_1:-47973172 | None:intergenic |
| CTGAGGTGCCACTGCCTCTC+CGG | 0.410692 | 5_1:-47973471 | None:intergenic |
| CCTACATTCATAAGAAAGTC+TGG | 0.411811 | 5_1:-47977288 | None:intergenic |
| ATCATAGAAGAAAGACCTTC+GGG | 0.423100 | 5_1:+47973374 | Msa0734250:five_prime_UTR |
| GAGTTGTTGAGCTTGATATT+TGG | 0.429323 | 5_1:+47974902 | Msa0734250:CDS |
| TCTTGTGGAGGTTCAGGGTG+AGG | 0.431224 | 5_1:+47973565 | Msa0734250:CDS |
| GGATTCTGATGAAGACGAAT+GGG | 0.432024 | 5_1:+47976302 | Msa0734250:CDS |
| TTGAATGAATCATTCATAGA+TGG | 0.435650 | 5_1:-47973321 | None:intergenic |
| TACATTACCTTAGATCTAAT+AGG | 0.436253 | 5_1:-47973731 | None:intergenic |
| CAAGTTCAGGCACAGTTAAA+GGG | 0.439023 | 5_1:-47978982 | None:intergenic |
| ACCAGTATATATGAAATAAT+GGG | 0.446982 | 5_1:-47974797 | None:intergenic |
| CTGGATGCATGGTGCTCAAA+TGG | 0.447345 | 5_1:+47977176 | Msa0734250:CDS |
| TCTGCGTGTGTTTCCGGCGG+AGG | 0.447743 | 5_1:+47973441 | Msa0734250:CDS |
| GCTTCCTTCAAACTACCCTT+AGG | 0.448231 | 5_1:-47976711 | None:intergenic |
| GAGAGAAGTACAACTCAGTT+AGG | 0.448951 | 5_1:+47979131 | Msa0734250:CDS |
| CCAGACTTTCTTATGAATGT+AGG | 0.454137 | 5_1:+47977288 | Msa0734250:CDS |
| AGGTTTCTTGTGGAGGTTCA+GGG | 0.461480 | 5_1:+47973560 | Msa0734250:CDS |
| AGAGAGATTGAGACAGAAGG+TGG | 0.462595 | 5_1:+47973094 | Msa0734250:five_prime_UTR |
| AAGAGTTATTACGACTGGAT+AGG | 0.471846 | 5_1:-47975791 | None:intergenic |
| AGAGTTATTACGACTGGATA+GGG | 0.472361 | 5_1:-47975790 | None:intergenic |
| AGGATAACTGGATACCTACT+TGG | 0.472804 | 5_1:+47978942 | Msa0734250:CDS |
| AATGGTTGCATTCAATATGC+AGG | 0.473650 | 5_1:+47977194 | Msa0734250:CDS |
| AGAAACCTTCGGAGCTGGTC+CGG | 0.476058 | 5_1:-47973545 | None:intergenic |
| GGAAGTGAAGAAGACTCTTA+AGG | 0.478944 | 5_1:+47977347 | Msa0734250:CDS |
| ACTACAAGCCACTGATTGGC+TGG | 0.486492 | 5_1:+47977157 | Msa0734250:CDS |
| AAACATTTGATCAAATCGAC+AGG | 0.486654 | 5_1:-47975733 | None:intergenic |
| GATCATAGAAGAAAGACCTT+CGG | 0.487288 | 5_1:+47973373 | Msa0734250:five_prime_UTR |
| CGTCTAATCGCTATTCATGC+TGG | 0.488281 | 5_1:+47976684 | Msa0734250:CDS |
| AAGTGAACAAGCTCTTGAAA+AGG | 0.493412 | 5_1:+47976773 | Msa0734250:CDS |
| GTGAATTCTTCTTCCCAAGT+AGG | 0.495880 | 5_1:-47978956 | None:intergenic |
| GGGTGAGGTTGATGATAAGA+AGG | 0.496920 | 5_1:+47973580 | Msa0734250:CDS |
| AAAACCTAAGGGTAGTTTGA+AGG | 0.497454 | 5_1:+47976707 | Msa0734250:CDS |
| AAGGTCATTCACAATTATAT+GGG | 0.498909 | 5_1:+47973407 | Msa0734250:exon |
| ATTATAAAGGCATTGAATAG+AGG | 0.500119 | 5_1:+47974874 | Msa0734250:CDS |
| TCGAACTACAAGCCACTGAT+TGG | 0.500499 | 5_1:+47977153 | Msa0734250:CDS |
| TGGATAGGTGAAAATATATG+TGG | 0.503909 | 5_1:+47977442 | Msa0734250:intron |
| GAGGTCACACGTGTACCCTT+CGG | 0.505051 | 5_1:-47977129 | None:intergenic |
| TATTCATGCTGGAAAACCTA+AGG | 0.508266 | 5_1:+47976695 | Msa0734250:CDS |
| ATGGAATGTTTAGATCCAAT+GGG | 0.511525 | 5_1:+47977244 | Msa0734250:CDS |
| CATGGAATGTTTAGATCCAA+TGG | 0.512922 | 5_1:+47977243 | Msa0734250:CDS |
| GTTTAAGTCCGGAGAGGCAG+TGG | 0.515820 | 5_1:+47973463 | Msa0734250:CDS |
| CACCTGAAGAACTGAAGTAT+AGG | 0.517294 | 5_1:+47976190 | Msa0734250:CDS |
| GAAGAAAACAAAGACAATAG+AGG | 0.517311 | 5_1:+47978922 | Msa0734250:intron |
| AACAAGAACATCATCTTTGG+TGG | 0.520787 | 5_1:-47974932 | None:intergenic |
| GGTCATAACTCCTATCTCAC+TGG | 0.522887 | 5_1:+47974817 | Msa0734250:CDS |
| TATATATAGAAACGTGGAGA+AGG | 0.528063 | 5_1:-47973241 | None:intergenic |
| TACTTCAGTTCTTCAGGTGA+CGG | 0.528094 | 5_1:-47976186 | None:intergenic |
| CCACAAGAAACCTTCGGAGC+TGG | 0.528950 | 5_1:-47973550 | None:intergenic |
| ATTACCTTAGATCTAATAGG+AGG | 0.531527 | 5_1:-47973728 | None:intergenic |
| GAACCTCCACAAGAAACCTT+CGG | 0.532112 | 5_1:-47973556 | None:intergenic |
| TGAACTTGCTTTGCTTAGAG+TGG | 0.533590 | 5_1:+47978997 | Msa0734250:CDS |
| GGAGAAGGAGGTGAAGAGAC+TGG | 0.535299 | 5_1:-47973226 | None:intergenic |
| GCTCCGAAGGTTTCTTGTGG+AGG | 0.535948 | 5_1:+47973553 | Msa0734250:CDS |
| ACCTTTCTTCTTCTACCCGA+AGG | 0.539841 | 5_1:-47973389 | None:intergenic |
| GGAGCTGGTCCGGAGTCATG+TGG | 0.541165 | 5_1:-47973535 | None:intergenic |
| GAGGTTGATGATAAGAAGGA+TGG | 0.541290 | 5_1:+47973584 | Msa0734250:CDS |
| CCACTGATTGGCTGGATGCA+TGG | 0.541875 | 5_1:+47977165 | Msa0734250:CDS |
| TTCCGGCGGAGGTTTAAGTC+CGG | 0.544875 | 5_1:+47973452 | Msa0734250:CDS |
| GTTCCACTTTACGATCGAAA+AGG | 0.548485 | 5_1:+47979109 | Msa0734250:CDS |
| ACTCTAAGCAAAGCAAGTTC+AGG | 0.549966 | 5_1:-47978995 | None:intergenic |
| CCAGCTCCGAAGGTTTCTTG+TGG | 0.554929 | 5_1:+47973550 | Msa0734250:CDS |
| ACCATATTTATTCATCAATG+AGG | 0.555539 | 5_1:+47973270 | Msa0734250:five_prime_UTR |
| AGGATTCTGATGAAGACGAA+TGG | 0.559684 | 5_1:+47976301 | Msa0734250:CDS |
| CCAATCACTGAACTAAAACA+AGG | 0.561367 | 5_1:+47979076 | Msa0734250:CDS |
| TCAACAAATATGCTGAAGGT+GGG | 0.564664 | 5_1:+47973510 | Msa0734250:CDS |
| GTTGCTGAAATCAAAATCAA+AGG | 0.564989 | 5_1:+47976281 | Msa0734250:CDS |
| AGTGGCACCTCAGGAAGTCA+GGG | 0.565531 | 5_1:+47973481 | Msa0734250:CDS |
| AAATATATGTGGGAGATGGA+TGG | 0.569314 | 5_1:+47977453 | Msa0734250:CDS |
| TGGAGGAAGTGTTGCAGAAG+CGG | 0.572705 | 5_1:+47973627 | Msa0734250:CDS |
| CTCCGGACTTAAACCTCCGC+CGG | 0.572907 | 5_1:-47973454 | None:intergenic |
| TTCAACAAATATGCTGAAGG+TGG | 0.574553 | 5_1:+47973509 | Msa0734250:CDS |
| CTTAAATTCCAAAAGTGTGA+GGG | 0.577857 | 5_1:+47976245 | Msa0734250:CDS |
| ATATAGAAACGTGGAGAAGG+AGG | 0.578003 | 5_1:-47973238 | None:intergenic |
| GTGAAAATATATGTGGGAGA+TGG | 0.579388 | 5_1:+47977449 | Msa0734250:CDS |
| GAGCTGGTCCGGAGTCATGT+GGG | 0.582097 | 5_1:-47973534 | None:intergenic |
| TAGAGAGAGATTGAGACAGA+AGG | 0.583272 | 5_1:+47973091 | Msa0734250:five_prime_UTR |
| ACCTTCGGGTAGAAGAAGAA+AGG | 0.583618 | 5_1:+47973388 | Msa0734250:five_prime_UTR |
| TGATGAAGACGAATGGGGAA+AGG | 0.584159 | 5_1:+47976308 | Msa0734250:CDS |
| TGACTCCGGACCAGCTCCGA+AGG | 0.587705 | 5_1:+47973540 | Msa0734250:CDS |
| GAATGTAGGTCCAAATAATG+AGG | 0.588015 | 5_1:+47977302 | Msa0734250:CDS |
| CAATCACTGAACTAAAACAA+GGG | 0.591710 | 5_1:+47979077 | Msa0734250:CDS |
| AAGATCTCCCTGACTTCCTG+AGG | 0.594500 | 5_1:-47973488 | None:intergenic |
| AATCAGTGGCTTGTAGTTCG+AGG | 0.596491 | 5_1:-47977151 | None:intergenic |
| TGATACACAGAAGGTGGTGG+AGG | 0.598642 | 5_1:+47973610 | Msa0734250:CDS |
| CAACAAATATGCTGAAGGTG+GGG | 0.601621 | 5_1:+47973511 | Msa0734250:CDS |
| TTACCTTAGATCTAATAGGA+GGG | 0.601825 | 5_1:-47973727 | None:intergenic |
| GGATAGGTGAAAATATATGT+GGG | 0.610194 | 5_1:+47977443 | Msa0734250:intron |
| ATGGTTGCATTCAATATGCA+GGG | 0.610409 | 5_1:+47977195 | Msa0734250:CDS |
| AGGTGGGGCCCACATGACTC+CGG | 0.610977 | 5_1:+47973526 | Msa0734250:CDS |
| TATATGAAATAATGGGACAA+TGG | 0.614028 | 5_1:-47974790 | None:intergenic |
| ATCTTCAACAAATATGCTGA+AGG | 0.614242 | 5_1:+47973506 | Msa0734250:CDS |
| CCATGCATCCAGCCAATCAG+TGG | 0.614932 | 5_1:-47977165 | None:intergenic |
| ACTTAAATTCCAAAAGTGTG+AGG | 0.622150 | 5_1:+47976244 | Msa0734250:CDS |
| TTCAGGCACAGTTAAAGGGA+AGG | 0.622601 | 5_1:-47978978 | None:intergenic |
| AGAAATCTTTGGTTGATGCA+TGG | 0.623956 | 5_1:+47977225 | Msa0734250:CDS |
| GGATAACTGGATACCTACTT+GGG | 0.627164 | 5_1:+47978943 | Msa0734250:CDS |
| ATTCATGCTGGAAAACCTAA+GGG | 0.629230 | 5_1:+47976696 | Msa0734250:CDS |
| GATCGTAAAGTGGAACGGCA+CGG | 0.631073 | 5_1:-47979102 | None:intergenic |
| ACTTGATACACAGAAGGTGG+TGG | 0.636561 | 5_1:+47973607 | Msa0734250:CDS |
| GATTCTGATGAAGACGAATG+GGG | 0.648745 | 5_1:+47976303 | Msa0734250:CDS |
| TGCACAAATTGAAGATGACA+AGG | 0.650877 | 5_1:+47976350 | Msa0734250:CDS |
| TTGAGTTAGACGGAAGGACA+AGG | 0.652569 | 5_1:+47973068 | Msa0734250:intron |
| GGATGGACTTGATACACAGA+AGG | 0.656436 | 5_1:+47973601 | Msa0734250:CDS |
| TGGACTTGATACACAGAAGG+TGG | 0.670412 | 5_1:+47973604 | Msa0734250:CDS |
| TATAATTATATATAGAAACG+TGG | 0.673222 | 5_1:-47973247 | None:intergenic |
| GAGTCTGCGTGTGTTTCCGG+CGG | 0.690751 | 5_1:+47973438 | Msa0734250:CDS |
| CAGTGGCTTGTAGTTCGAGG+AGG | 0.691482 | 5_1:-47977148 | None:intergenic |
| TGGAATGTTTAGATCCAATG+GGG | 0.693138 | 5_1:+47977245 | Msa0734250:CDS |
| GCGGAGGTTTAAGTCCGGAG+AGG | 0.705206 | 5_1:+47973457 | Msa0734250:CDS |
| GGAATGTTTAGATCCAATGG+GGG | 0.738406 | 5_1:+47977246 | Msa0734250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAAAATTTAAATTT+TGG | + | chr5_1:47978220-47978239 | Msa0734250:intron | 0.0% |
| !!! | AAAAAAAAAATTTAAATTTT+GGG | + | chr5_1:47978221-47978240 | Msa0734250:intron | 0.0% |
| !!! | TACAATTTGATTTTTTATAA+AGG | - | chr5_1:47975281-47975300 | None:intergenic | 10.0% |
| !!! | TTTTTTAAATTTTCATCATT+TGG | - | chr5_1:47976162-47976181 | None:intergenic | 10.0% |
| !!! | CATTTTTTTTTTAAATTGTA+AGG | - | chr5_1:47978415-47978434 | None:intergenic | 10.0% |
| !!! | ATTAGTACTAATTTTAAAGT+TGG | - | chr5_1:47973009-47973028 | None:intergenic | 15.0% |
| !! | TTTATCAAAAATATTTCACA+TGG | + | chr5_1:47973143-47973162 | Msa0734250:five_prime_UTR | 15.0% |
| !! | TATAATTATATATAGAAACG+TGG | - | chr5_1:47973250-47973269 | None:intergenic | 15.0% |
| !! | ATAAGTTATTCAATAATCTA+TGG | + | chr5_1:47973921-47973940 | Msa0734250:intron | 15.0% |
| !!! | ATAAAACGTGTAAATTTTAT+AGG | + | chr5_1:47975998-47976017 | Msa0734250:intron | 15.0% |
| !!! | TAAAACGTGTAAATTTTATA+GGG | + | chr5_1:47975999-47976018 | Msa0734250:intron | 15.0% |
| !!! | TGTATTGAATTTAATTTCAT+TGG | + | chr5_1:47977422-47977441 | Msa0734250:intron | 15.0% |
| !!! | AGGGAAAAAAAATTAAATTT+TGG | + | chr5_1:47978155-47978174 | Msa0734250:intron | 15.0% |
| !!! | GGGAAAAAAAATTAAATTTT+GGG | + | chr5_1:47978156-47978175 | Msa0734250:intron | 15.0% |
| !!! | AGTGTTTTATTTAGTTTTTT+GGG | - | chr5_1:47978183-47978202 | None:intergenic | 15.0% |
| !!! | TAGTGTTTTATTTAGTTTTT+TGG | - | chr5_1:47978184-47978203 | None:intergenic | 15.0% |
| !!! | AGTGTTTTATTTAGTTTTTT+GGG | - | chr5_1:47978183-47978202 | None:intergenic | 15.0% |
| !!! | TAGTGTTTTATTTAGTTTTT+TGG | - | chr5_1:47978184-47978203 | None:intergenic | 15.0% |
| !!! | TTTTTTAATAAAAAACTCTC+TGG | + | chr5_1:47978278-47978297 | Msa0734250:intron | 15.0% |
| !! | TACAGTTATGAATAAAGAAA+TGG | + | chr5_1:47973028-47973047 | Msa0734250:intron | 20.0% |
| !!! | GTTATGTTGTTTTAATTCAA+CGG | + | chr5_1:47973768-47973787 | Msa0734250:intron | 20.0% |
| !! | ATTATTGAATAACTTATCTC+TGG | - | chr5_1:47973918-47973937 | None:intergenic | 20.0% |
| !!! | AGTTTTGAAGTTAATATGAA+TGG | + | chr5_1:47974493-47974512 | Msa0734250:intron | 20.0% |
| !!! | ATTGGTAATTTTACTAGTAT+TGG | + | chr5_1:47974586-47974605 | Msa0734250:intron | 20.0% |
| !! | CAAACATATGCATTAAATTA+AGG | - | chr5_1:47974645-47974664 | None:intergenic | 20.0% |
| !! | ATTTACTTAACATCACTAAT+AGG | - | chr5_1:47974733-47974752 | None:intergenic | 20.0% |
| !! | ACCAGTATATATGAAATAAT+GGG | - | chr5_1:47974800-47974819 | None:intergenic | 20.0% |
| !! | CAGTTTATAACTTATACAAA+CGG | - | chr5_1:47976445-47976464 | None:intergenic | 20.0% |
| !!! | TTTATCTTCTTCAACTTTTA+AGG | - | chr5_1:47976736-47976755 | None:intergenic | 20.0% |
| !! | GTAGATTATTTGTATACTTA+AGG | - | chr5_1:47977009-47977028 | None:intergenic | 20.0% |
| !! | TTAGAATGTAGAATAGTTTA+AGG | - | chr5_1:47977050-47977069 | None:intergenic | 20.0% |
| !!! | TGAATTTAATTTCATTGGAT+AGG | + | chr5_1:47977427-47977446 | Msa0734250:intron | 20.0% |
| !! | TTGTAACGTTAATAACTTAT+GGG | - | chr5_1:47977651-47977670 | None:intergenic | 20.0% |
| !! | ATTGTAACGTTAATAACTTA+TGG | - | chr5_1:47977652-47977671 | None:intergenic | 20.0% |
| !! | AAGTTATTAACGTTACAATT+TGG | + | chr5_1:47977653-47977672 | Msa0734250:intron | 20.0% |
| !!! | ACGAAACTTTTAATAGTTAA+GGG | - | chr5_1:47977711-47977730 | None:intergenic | 20.0% |
| !!! | AACGAAACTTTTAATAGTTA+AGG | - | chr5_1:47977712-47977731 | None:intergenic | 20.0% |
| !!! | AACTATTAAAAGTTTCGTTT+TGG | + | chr5_1:47977713-47977732 | Msa0734250:intron | 20.0% |
| !! | TTAAGGCTTAATTAATGATT+TGG | - | chr5_1:47977766-47977785 | None:intergenic | 20.0% |
| !! | TATTAGTGCATAAAGAATTA+AGG | - | chr5_1:47977783-47977802 | None:intergenic | 20.0% |
| !!! | TAAGTTATTTAAGATTCAAG+TGG | - | chr5_1:47977881-47977900 | None:intergenic | 20.0% |
| !! | CTTGAATCTTAAATAACTTA+AGG | + | chr5_1:47977881-47977900 | Msa0734250:intron | 20.0% |
| !!! | GTGTTTTATTTAGTTTTTTG+GGG | - | chr5_1:47978182-47978201 | None:intergenic | 20.0% |
| !!! | GTGTTTTATTTAGTTTTTTG+GGG | - | chr5_1:47978182-47978201 | None:intergenic | 20.0% |
| ! | ACCATATTTATTCATCAATG+AGG | + | chr5_1:47973270-47973289 | Msa0734250:five_prime_UTR | 25.0% |
| ! | TCCTCATTGATGAATAAATA+TGG | - | chr5_1:47973274-47973293 | None:intergenic | 25.0% |
| ! | TTGAATGAATCATTCATAGA+TGG | - | chr5_1:47973324-47973343 | None:intergenic | 25.0% |
| ! | AAAGGTCATTCACAATTATA+TGG | + | chr5_1:47973406-47973425 | Msa0734250:exon | 25.0% |
| ! | AAGGTCATTCACAATTATAT+GGG | + | chr5_1:47973407-47973426 | Msa0734250:exon | 25.0% |
| ! | TACATTACCTTAGATCTAAT+AGG | - | chr5_1:47973734-47973753 | None:intergenic | 25.0% |
| !!! | CACTTTTAAGAAGTACATTA+GGG | - | chr5_1:47974188-47974207 | None:intergenic | 25.0% |
| !!! | ACACTTTTAAGAAGTACATT+AGG | - | chr5_1:47974189-47974208 | None:intergenic | 25.0% |
| !!! | AACAAAGTGTTTTCAAATAG+AGG | + | chr5_1:47974347-47974366 | Msa0734250:intron | 25.0% |
| ! | TTTATAGTAGTGTAACATAG+TGG | + | chr5_1:47974380-47974399 | Msa0734250:intron | 25.0% |
| ! | TTGAAGTTAATATGAATGGA+AGG | + | chr5_1:47974497-47974516 | Msa0734250:intron | 25.0% |
| !!! | TCTTTTGCTTTTTCTTTGAT+TGG | + | chr5_1:47974568-47974587 | Msa0734250:intron | 25.0% |
| !! | TTTACTAGTATTGGATGAAA+AGG | + | chr5_1:47974595-47974614 | Msa0734250:intron | 25.0% |
| !!! | TGAAAAGGACAAGTTTTTTT+AGG | + | chr5_1:47974610-47974629 | Msa0734250:intron | 25.0% |
| ! | TCATGCAAATTAAGTAAACT+TGG | - | chr5_1:47974676-47974695 | None:intergenic | 25.0% |
| !!! | GTTTACTTAATTTGCATGAA+TGG | + | chr5_1:47974677-47974696 | Msa0734250:intron | 25.0% |
| ! | GTAAATTTCTTGTCTAATTC+AGG | + | chr5_1:47974747-47974766 | Msa0734250:intron | 25.0% |
| !! | TATATGAAATAATGGGACAA+TGG | - | chr5_1:47974793-47974812 | None:intergenic | 25.0% |
| ! | TCCCATTATTTCATATATAC+TGG | + | chr5_1:47974796-47974815 | Msa0734250:CDS | 25.0% |
| ! | GACCAGTATATATGAAATAA+TGG | - | chr5_1:47974801-47974820 | None:intergenic | 25.0% |
| ! | TAGTGATGTTCCTATTATAA+AGG | + | chr5_1:47974861-47974880 | Msa0734250:CDS | 25.0% |
| ! | CTATTCAATGCCTTTATAAT+AGG | - | chr5_1:47974874-47974893 | None:intergenic | 25.0% |
| !!! | ATTATAAAGGCATTGAATAG+AGG | + | chr5_1:47974874-47974893 | Msa0734250:CDS | 25.0% |
| ! | TAAAACAAGAACATCATCTT+TGG | - | chr5_1:47974938-47974957 | None:intergenic | 25.0% |
| !!! | CTTCTAAACTGCTTTAAAAA+CGG | - | chr5_1:47975021-47975040 | None:intergenic | 25.0% |
| ! | TTGTGAATTGTTTCATAACT+TGG | + | chr5_1:47975525-47975544 | Msa0734250:intron | 25.0% |
| ! | AAAAAGATTACTAGCACAAT+AGG | - | chr5_1:47975616-47975635 | None:intergenic | 25.0% |
| !!! | CTTTGATTTTACATTTTTGC+TGG | + | chr5_1:47975636-47975655 | Msa0734250:intron | 25.0% |
| !! | TTTTGCTTATATTCTACTTG+TGG | + | chr5_1:47975681-47975700 | Msa0734250:intron | 25.0% |
| !! | CAAATGTTTGAAATCCATTA+AGG | + | chr5_1:47975747-47975766 | Msa0734250:CDS | 25.0% |
| ! | ATAAAACTCGAGATATTTAC+AGG | - | chr5_1:47975893-47975912 | None:intergenic | 25.0% |
| !!! | AATCGTTTGTTATATCTGAA+AGG | + | chr5_1:47976037-47976056 | Msa0734250:intron | 25.0% |
| ! | TAGATGATTACTCAAACATT+TGG | + | chr5_1:47976120-47976139 | Msa0734250:intron | 25.0% |
| !! | TTGGAATTTAAGTACTCTTT+TGG | - | chr5_1:47976237-47976256 | None:intergenic | 25.0% |
| ! | ACATTATCTTGTGAAAATAG+AGG | - | chr5_1:47976408-47976427 | None:intergenic | 25.0% |
| !!! | TTTACTTTCTACTTTTTGAC+AGG | + | chr5_1:47976575-47976594 | Msa0734250:intron | 25.0% |
| !!! | TTACTTTCTACTTTTTGACA+GGG | + | chr5_1:47976576-47976595 | Msa0734250:intron | 25.0% |
| ! | TAGAATAGTTTAAGGAAAAG+TGG | - | chr5_1:47977042-47977061 | None:intergenic | 25.0% |
| ! | ATTCTACATTCTAATCGTAA+TGG | + | chr5_1:47977056-47977075 | Msa0734250:intron | 25.0% |
| !! | TGGTTTCTATTTTGTATGAT+AGG | + | chr5_1:47977076-47977095 | Msa0734250:intron | 25.0% |
| !! | TATCCTCAAAAAGTTTTTCT+GGG | - | chr5_1:47977106-47977125 | None:intergenic | 25.0% |
| !! | ATATCCTCAAAAAGTTTTTC+TGG | - | chr5_1:47977107-47977126 | None:intergenic | 25.0% |
| ! | ATTCAATCCTAAAGAGAAAT+TGG | + | chr5_1:47977326-47977345 | Msa0734250:CDS | 25.0% |
| ! | TAAATAGAAAAAACTTACCC+TGG | - | chr5_1:47977534-47977553 | None:intergenic | 25.0% |
| ! | GTAACCAACAAATAACTTAA+GGG | - | chr5_1:47977620-47977639 | None:intergenic | 25.0% |
| ! | TGTAACCAACAAATAACTTA+AGG | - | chr5_1:47977621-47977640 | None:intergenic | 25.0% |
| !!! | GTTATTTGTTGGTTACATTT+TGG | + | chr5_1:47977624-47977643 | Msa0734250:intron | 25.0% |
| ! | GAAACCAAAAAGTAACTTAA+GGG | - | chr5_1:47977680-47977699 | None:intergenic | 25.0% |
| ! | TGAAACCAAAAAGTAACTTA+AGG | - | chr5_1:47977681-47977700 | None:intergenic | 25.0% |
| !!! | GTTACTTTTTGGTTTCATTT+TGG | + | chr5_1:47977684-47977703 | Msa0734250:intron | 25.0% |
| ! | CCTGAGTTATTAAAAGTTAA+GGG | - | chr5_1:47977740-47977759 | None:intergenic | 25.0% |
| !! | CCTTAACTTTTAATAACTCA+GGG | + | chr5_1:47977738-47977757 | Msa0734250:intron | 25.0% |
| !! | CTTAACTTTTAATAACTCAG+GGG | + | chr5_1:47977739-47977758 | Msa0734250:intron | 25.0% |
| !!! | TTTCTAGAGTACATTTGTTA+AGG | + | chr5_1:47977942-47977961 | Msa0734250:intron | 25.0% |
| ! | AGGTCTATTTACAAGTTATT+TGG | + | chr5_1:47977962-47977981 | Msa0734250:intron | 25.0% |
| ! | TTTAATAAAAAACTCTCTGG+TGG | + | chr5_1:47978281-47978300 | Msa0734250:intron | 25.0% |
| ! | TTAATAAAAAACTCTCTGGT+GGG | + | chr5_1:47978282-47978301 | Msa0734250:intron | 25.0% |
| ! | TTCATAAGCTCTTACAAAAA+TGG | - | chr5_1:47978646-47978665 | None:intergenic | 25.0% |
| ! | AACAAAGACTTTGAGTTAGA+CGG | + | chr5_1:47973058-47973077 | Msa0734250:intron | 30.0% |
| AGAAAACACTTTCATGATCT+AGG | - | chr5_1:47973175-47973194 | None:intergenic | 30.0% | |
| TATATATAGAAACGTGGAGA+AGG | - | chr5_1:47973244-47973263 | None:intergenic | 30.0% | |
| ATCTTCAACAAATATGCTGA+AGG | + | chr5_1:47973506-47973525 | Msa0734250:CDS | 30.0% | |
| TTACCTTAGATCTAATAGGA+GGG | - | chr5_1:47973730-47973749 | None:intergenic | 30.0% | |
| ATTACCTTAGATCTAATAGG+AGG | - | chr5_1:47973731-47973750 | None:intergenic | 30.0% | |
| !! | TAATTCAACGGTTTGACTTT+TGG | + | chr5_1:47973780-47973799 | Msa0734250:intron | 30.0% |
| TATGTTTCTTTCTCAAGTGT+TGG | + | chr5_1:47973817-47973836 | Msa0734250:intron | 30.0% | |
| TTGGATTATGTTTGTCTCAA+GGG | + | chr5_1:47973862-47973881 | Msa0734250:intron | 30.0% | |
| TTCAAATTTCACTTCACTAC+AGG | - | chr5_1:47974283-47974302 | None:intergenic | 30.0% | |
| !!! | AATTAGTTTTCTGTGTATCG+TGG | - | chr5_1:47974321-47974340 | None:intergenic | 30.0% |
| AAGTTAATATGAATGGAAGG+TGG | + | chr5_1:47974500-47974519 | Msa0734250:intron | 30.0% | |
| AGTTAATATGAATGGAAGGT+GGG | + | chr5_1:47974501-47974520 | Msa0734250:intron | 30.0% | |
| !!! | GACAAGTTTTTTTAGGCAAA+GGG | + | chr5_1:47974617-47974636 | Msa0734250:intron | 30.0% |
| !!! | GATGATGTTCTTGTTTTACA+TGG | + | chr5_1:47974940-47974959 | Msa0734250:CDS | 30.0% |
| !!! | ATGTTCTTGTTTTACATGGA+AGG | + | chr5_1:47974944-47974963 | Msa0734250:CDS | 30.0% |
| !! | GTTTTACTGAACTGTTTTAG+TGG | - | chr5_1:47975169-47975188 | None:intergenic | 30.0% |
| AAACTGAACTGAACAATGAA+TGG | + | chr5_1:47975185-47975204 | Msa0734250:intron | 30.0% | |
| !!! | TCTTTGTTTTCAAACAGAAC+TGG | + | chr5_1:47975250-47975269 | Msa0734250:intron | 30.0% |
| TTCACAAAGGAAAAACAGTT+TGG | - | chr5_1:47975333-47975352 | None:intergenic | 30.0% | |
| !! | TATTGCGCAATAACTGATTT+TGG | + | chr5_1:47975392-47975411 | Msa0734250:intron | 30.0% |
| !!! | CAATTTGGTTTTGTTCAGTT+CGG | - | chr5_1:47975453-47975472 | None:intergenic | 30.0% |
| GTTCAATTTAGTCCATGAAT+TGG | - | chr5_1:47975481-47975500 | None:intergenic | 30.0% | |
| ! | TGTTTCATAACTTGGTTCTT+TGG | + | chr5_1:47975533-47975552 | Msa0734250:intron | 30.0% |
| ! | TAACTTGGTTCTTTGGATTA+CGG | + | chr5_1:47975540-47975559 | Msa0734250:intron | 30.0% |
| AAACATTTGATCAAATCGAC+AGG | - | chr5_1:47975736-47975755 | None:intergenic | 30.0% | |
| AACTTGTAGAGACATAAAAG+TGG | + | chr5_1:47975960-47975979 | Msa0734250:intron | 30.0% | |
| !!! | ACTCAGGTTCACAAATTTTT+TGG | + | chr5_1:47976068-47976087 | Msa0734250:intron | 30.0% |
| ! | GAATTTAAGTACTCTTTTGG+AGG | - | chr5_1:47976234-47976253 | None:intergenic | 30.0% |
| ! | ACTTAAATTCCAAAAGTGTG+AGG | + | chr5_1:47976244-47976263 | Msa0734250:CDS | 30.0% |
| ! | CTTAAATTCCAAAAGTGTGA+GGG | + | chr5_1:47976245-47976264 | Msa0734250:CDS | 30.0% |
| GTTGCTGAAATCAAAATCAA+AGG | + | chr5_1:47976281-47976300 | Msa0734250:CDS | 30.0% | |
| ! | TTGAAGCTTTTAACATGTTC+AGG | - | chr5_1:47976482-47976501 | None:intergenic | 30.0% |
| !! | TTTTTGAGGATATATCCGAA+GGG | + | chr5_1:47977114-47977133 | Msa0734250:CDS | 30.0% |
| ATGGAATGTTTAGATCCAAT+GGG | + | chr5_1:47977244-47977263 | Msa0734250:CDS | 30.0% | |
| GGATTGAATACCTCATTATT+TGG | - | chr5_1:47977315-47977334 | None:intergenic | 30.0% | |
| TTCACTTCCAATTTCTCTTT+AGG | - | chr5_1:47977336-47977355 | None:intergenic | 30.0% | |
| TGGATAGGTGAAAATATATG+TGG | + | chr5_1:47977442-47977461 | Msa0734250:intron | 30.0% | |
| GGATAGGTGAAAATATATGT+GGG | + | chr5_1:47977443-47977462 | Msa0734250:intron | 30.0% | |
| GCAGTGATATTGTAAATCAA+AGG | - | chr5_1:47977568-47977587 | None:intergenic | 30.0% | |
| CAATATCACTGCTTAATTCT+TGG | + | chr5_1:47977576-47977595 | Msa0734250:intron | 30.0% | |
| ! | TCTTGGCTTAATTACTCTTT+TGG | + | chr5_1:47977593-47977612 | Msa0734250:intron | 30.0% |
| ! | CCCTTAACTTTTAATAACTC+AGG | + | chr5_1:47977737-47977756 | Msa0734250:intron | 30.0% |
| CCCTGAGTTATTAAAAGTTA+AGG | - | chr5_1:47977741-47977760 | None:intergenic | 30.0% | |
| !!! | CTTCTCTTTTGCTACTTTTA+AGG | + | chr5_1:47977806-47977825 | Msa0734250:intron | 30.0% |
| ! | GATACGTATACTTAGGTTTT+TGG | - | chr5_1:47978053-47978072 | None:intergenic | 30.0% |
| !! | CGATTTTGATACGTATACTT+AGG | - | chr5_1:47978060-47978079 | None:intergenic | 30.0% |
| CAAGATTCATCATAACCAAT+CGG | + | chr5_1:47978506-47978525 | Msa0734250:intron | 30.0% | |
| AAGATTCATCATAACCAATC+GGG | + | chr5_1:47978507-47978526 | Msa0734250:intron | 30.0% | |
| CATGCAAGTCATATTTCAAT+TGG | - | chr5_1:47978604-47978623 | None:intergenic | 30.0% | |
| GAAGAAAACAAAGACAATAG+AGG | + | chr5_1:47978922-47978941 | Msa0734250:intron | 30.0% | |
| CAATCACTGAACTAAAACAA+GGG | + | chr5_1:47979077-47979096 | Msa0734250:CDS | 30.0% | |
| GATCATAGAAGAAAGACCTT+CGG | + | chr5_1:47973373-47973392 | Msa0734250:five_prime_UTR | 35.0% | |
| ATCATAGAAGAAAGACCTTC+GGG | + | chr5_1:47973374-47973393 | Msa0734250:five_prime_UTR | 35.0% | |
| TTCAACAAATATGCTGAAGG+TGG | + | chr5_1:47973509-47973528 | Msa0734250:CDS | 35.0% | |
| TCAACAAATATGCTGAAGGT+GGG | + | chr5_1:47973510-47973529 | Msa0734250:CDS | 35.0% | |
| ! | AATGTTTCTGTCTCAAGTGT+TGG | + | chr5_1:47973843-47973862 | Msa0734250:intron | 35.0% |
| GTTGGATTATGTTTGTCTCA+AGG | + | chr5_1:47973861-47973880 | Msa0734250:intron | 35.0% | |
| ATTATGTTTGTCTCAAGGGT+TGG | + | chr5_1:47973866-47973885 | Msa0734250:intron | 35.0% | |
| TCTTCCTAAGTAGAAGTTCA+TGG | + | chr5_1:47973984-47974003 | Msa0734250:intron | 35.0% | |
| ACTACCATGAACTTCTACTT+AGG | - | chr5_1:47973991-47974010 | None:intergenic | 35.0% | |
| ! | ATGTCATTGTCCTTGCTATA+AGG | + | chr5_1:47974152-47974171 | Msa0734250:intron | 35.0% |
| TCTTCAAAACTATCTTCACC+TGG | - | chr5_1:47974540-47974559 | None:intergenic | 35.0% | |
| !!! | GGACAAGTTTTTTTAGGCAA+AGG | + | chr5_1:47974616-47974635 | Msa0734250:intron | 35.0% |
| ! | TTGTCTAATTCAGGTTCATC+AGG | + | chr5_1:47974756-47974775 | Msa0734250:intron | 35.0% |
| ! | TAGTTGATTTCCAGTGAGAT+AGG | - | chr5_1:47974830-47974849 | None:intergenic | 35.0% |
| GAGTTGTTGAGCTTGATATT+TGG | + | chr5_1:47974902-47974921 | Msa0734250:CDS | 35.0% | |
| ACATCATCTTTGGTGGAATT+GGG | - | chr5_1:47974928-47974947 | None:intergenic | 35.0% | |
| AACATCATCTTTGGTGGAAT+TGG | - | chr5_1:47974929-47974948 | None:intergenic | 35.0% | |
| AACAAGAACATCATCTTTGG+TGG | - | chr5_1:47974935-47974954 | None:intergenic | 35.0% | |
| !! | CCATTTTGCAATGTGTTGAT+AGG | - | chr5_1:47974984-47975003 | None:intergenic | 35.0% |
| CCTATCAACACATTGCAAAA+TGG | + | chr5_1:47974981-47975000 | Msa0734250:intron | 35.0% | |
| AACAAAGTTCTCTTCTGCTT+TGG | + | chr5_1:47975093-47975112 | Msa0734250:intron | 35.0% | |
| TGAACAATGAATGGTAAGTC+CGG | + | chr5_1:47975194-47975213 | Msa0734250:intron | 35.0% | |
| TGGTACACAAAGATACAGTT+CGG | - | chr5_1:47975313-47975332 | None:intergenic | 35.0% | |
| ! | AAAAGGTGCAAGATTCACAA+AGG | - | chr5_1:47975346-47975365 | None:intergenic | 35.0% |
| TACGGTTCCATTCAGTTTAA+CGG | + | chr5_1:47975558-47975577 | Msa0734250:intron | 35.0% | |
| AACAGAACCGTTAAACTGAA+TGG | - | chr5_1:47975568-47975587 | None:intergenic | 35.0% | |
| AGAGTTATTACGACTGGATA+GGG | - | chr5_1:47975793-47975812 | None:intergenic | 35.0% | |
| AAGAGTTATTACGACTGGAT+AGG | - | chr5_1:47975794-47975813 | None:intergenic | 35.0% | |
| TCTTCAAGAGTTATTACGAC+TGG | - | chr5_1:47975799-47975818 | None:intergenic | 35.0% | |
| CTGCTCAGGTAATTTCTTAT+AGG | + | chr5_1:47975848-47975867 | Msa0734250:intron | 35.0% | |
| AAGTTTCTGTATCCTCTTTG+AGG | + | chr5_1:47975916-47975935 | Msa0734250:intron | 35.0% | |
| ATCCTATACTTCAGTTCTTC+AGG | - | chr5_1:47976195-47976214 | None:intergenic | 35.0% | |
| TGCACAAATTGAAGATGACA+AGG | + | chr5_1:47976350-47976369 | Msa0734250:CDS | 35.0% | |
| AGTTCAAATAAGCCAATTCG+CGG | + | chr5_1:47976546-47976565 | Msa0734250:intron | 35.0% | |
| AGTAAAAAAAGACCGCGAAT+TGG | - | chr5_1:47976561-47976580 | None:intergenic | 35.0% | |
| TATTCATGCTGGAAAACCTA+AGG | + | chr5_1:47976695-47976714 | Msa0734250:CDS | 35.0% | |
| ATTCATGCTGGAAAACCTAA+GGG | + | chr5_1:47976696-47976715 | Msa0734250:CDS | 35.0% | |
| AAAACCTAAGGGTAGTTTGA+AGG | + | chr5_1:47976707-47976726 | Msa0734250:CDS | 35.0% | |
| ! | GAGCTTGTTCACTTAAACTA+AGG | - | chr5_1:47976767-47976786 | None:intergenic | 35.0% |
| AAGTGAACAAGCTCTTGAAA+AGG | + | chr5_1:47976773-47976792 | Msa0734250:CDS | 35.0% | |
| GACATTTGCAGAATGACTAT+TGG | - | chr5_1:47976889-47976908 | None:intergenic | 35.0% | |
| AGTTAGACTTTGCAATCTCA+CGG | - | chr5_1:47976935-47976954 | None:intergenic | 35.0% | |
| ! | TCACCCAGAAAAACTTTTTG+AGG | + | chr5_1:47977100-47977119 | Msa0734250:CDS | 35.0% |
| !! | CTTTTTGAGGATATATCCGA+AGG | + | chr5_1:47977113-47977132 | Msa0734250:CDS | 35.0% |
| AATGGTTGCATTCAATATGC+AGG | + | chr5_1:47977194-47977213 | Msa0734250:CDS | 35.0% | |
| ATGGTTGCATTCAATATGCA+GGG | + | chr5_1:47977195-47977214 | Msa0734250:CDS | 35.0% | |
| ! | AGAAATCTTTGGTTGATGCA+TGG | + | chr5_1:47977225-47977244 | Msa0734250:CDS | 35.0% |
| CATGGAATGTTTAGATCCAA+TGG | + | chr5_1:47977243-47977262 | Msa0734250:CDS | 35.0% | |
| TGGAATGTTTAGATCCAATG+GGG | + | chr5_1:47977245-47977264 | Msa0734250:CDS | 35.0% | |
| CCTACATTCATAAGAAAGTC+TGG | - | chr5_1:47977291-47977310 | None:intergenic | 35.0% | |
| CCAGACTTTCTTATGAATGT+AGG | + | chr5_1:47977288-47977307 | Msa0734250:CDS | 35.0% | |
| GAATGTAGGTCCAAATAATG+AGG | + | chr5_1:47977302-47977321 | Msa0734250:CDS | 35.0% | |
| GTGAAAATATATGTGGGAGA+TGG | + | chr5_1:47977449-47977468 | Msa0734250:CDS | 35.0% | |
| AAATATATGTGGGAGATGGA+TGG | + | chr5_1:47977453-47977472 | Msa0734250:CDS | 35.0% | |
| TGGTCCCTTAAGTTATTTGT+TGG | + | chr5_1:47977613-47977632 | Msa0734250:intron | 35.0% | |
| !!! | TGGTCCCTTAAGTTACTTTT+TGG | + | chr5_1:47977673-47977692 | Msa0734250:intron | 35.0% |
| !! | GGCCAACAAATTTGTTAACA+CGG | - | chr5_1:47978120-47978139 | None:intergenic | 35.0% |
| TTCCCTTCAAATCTAAACCA+GGG | - | chr5_1:47978141-47978160 | None:intergenic | 35.0% | |
| TTTCCCTTCAAATCTAAACC+AGG | - | chr5_1:47978142-47978161 | None:intergenic | 35.0% | |
| ! | TGTGCATTTATGATGGAGTT+TGG | - | chr5_1:47978324-47978343 | None:intergenic | 35.0% |
| GTTATGATGAATCTTGACCA+GGG | - | chr5_1:47978502-47978521 | None:intergenic | 35.0% | |
| ! | ATCTCATTTTGAATCCCGAT+TGG | - | chr5_1:47978524-47978543 | None:intergenic | 35.0% |
| TATCAAATGTGAAACCTTGC+AGG | + | chr5_1:47978673-47978692 | Msa0734250:intron | 35.0% | |
| TTCATGTAAGTTATCCTGCA+AGG | - | chr5_1:47978690-47978709 | None:intergenic | 35.0% | |
| !! | CTATTTCTGTAATCGTCGAA+AGG | - | chr5_1:47978750-47978769 | None:intergenic | 35.0% |
| CATGTAAACTCATGCAAGAA+GGG | - | chr5_1:47978851-47978870 | None:intergenic | 35.0% | |
| ACATGTAAACTCATGCAAGA+AGG | - | chr5_1:47978852-47978871 | None:intergenic | 35.0% | |
| CAAAGACAATAGAGGATAAC+TGG | + | chr5_1:47978930-47978949 | Msa0734250:CDS | 35.0% | |
| !!! | CCTTGTTTTAGTTCAGTGAT+TGG | - | chr5_1:47979079-47979098 | None:intergenic | 35.0% |
| CCAATCACTGAACTAAAACA+AGG | + | chr5_1:47979076-47979095 | Msa0734250:CDS | 35.0% | |
| ! | TTTTCGATCGTAAAGTGGAA+CGG | - | chr5_1:47979110-47979129 | None:intergenic | 35.0% |
| ! | AAGACTTTGAGTTAGACGGA+AGG | + | chr5_1:47973062-47973081 | Msa0734250:intron | 40.0% |
| TAGAGAGAGATTGAGACAGA+AGG | + | chr5_1:47973091-47973110 | Msa0734250:five_prime_UTR | 40.0% | |
| ATATAGAAACGTGGAGAAGG+AGG | - | chr5_1:47973241-47973260 | None:intergenic | 40.0% | |
| CAACAAATATGCTGAAGGTG+GGG | + | chr5_1:47973511-47973530 | Msa0734250:CDS | 40.0% | |
| !! | GAGGTTGATGATAAGAAGGA+TGG | + | chr5_1:47973584-47973603 | Msa0734250:CDS | 40.0% |
| CAACCCTCCTATTAGATCTA+AGG | + | chr5_1:47973724-47973743 | Msa0734250:CDS | 40.0% | |
| GTCTCAAGGGTTGGATTAAT+TGG | + | chr5_1:47973875-47973894 | Msa0734250:intron | 40.0% | |
| CAAAATCGTGTTCTCAATCG+CGG | - | chr5_1:47974435-47974454 | None:intergenic | 40.0% | |
| GCACGTGTGACATTTCATAA+AGG | + | chr5_1:47974468-47974487 | Msa0734250:intron | 40.0% | |
| TTCGTAAACCGAACCATGAA+CGG | - | chr5_1:47975120-47975139 | None:intergenic | 40.0% | |
| AATGAATGGTAAGTCCGGAA+TGG | + | chr5_1:47975199-47975218 | Msa0734250:intron | 40.0% | |
| GGTATATGGGTTTCGTGTAT+TGG | + | chr5_1:47975226-47975245 | Msa0734250:intron | 40.0% | |
| ! | AATCTTGCACCTTTTCGAAC+TGG | + | chr5_1:47975351-47975370 | Msa0734250:intron | 40.0% |
| TGAACTTGTCCAGTTCGAAA+AGG | - | chr5_1:47975363-47975382 | None:intergenic | 40.0% | |
| TTTCGAACTGGACAAGTTCA+AGG | + | chr5_1:47975363-47975382 | Msa0734250:intron | 40.0% | |
| CATGAATTGGCGTCACAATT+TGG | - | chr5_1:47975468-47975487 | None:intergenic | 40.0% | |
| CAAATTGTGACGCCAATTCA+TGG | + | chr5_1:47975466-47975485 | Msa0734250:intron | 40.0% | |
| TGTCAATGTCCTACATTCAC+AGG | - | chr5_1:47975710-47975729 | None:intergenic | 40.0% | |
| AGCGAATGCATGTTCCTTAA+TGG | - | chr5_1:47975764-47975783 | None:intergenic | 40.0% | |
| ! | GTATCCTCTTTGAGGACTAA+AGG | + | chr5_1:47975924-47975943 | Msa0734250:intron | 40.0% |
| CTGAAAGGAGTAAATCACTC+AGG | + | chr5_1:47976052-47976071 | Msa0734250:intron | 40.0% | |
| TACTTCAGTTCTTCAGGTGA+CGG | - | chr5_1:47976189-47976208 | None:intergenic | 40.0% | |
| CACCTGAAGAACTGAAGTAT+AGG | + | chr5_1:47976190-47976209 | Msa0734250:CDS | 40.0% | |
| ! | AGAATTCTCCCTCACACTTT+TGG | - | chr5_1:47976256-47976275 | None:intergenic | 40.0% |
| AGGATTCTGATGAAGACGAA+TGG | + | chr5_1:47976301-47976320 | Msa0734250:CDS | 40.0% | |
| GGATTCTGATGAAGACGAAT+GGG | + | chr5_1:47976302-47976321 | Msa0734250:CDS | 40.0% | |
| GATTCTGATGAAGACGAATG+GGG | + | chr5_1:47976303-47976322 | Msa0734250:CDS | 40.0% | |
| ATTCTGCAAATGTCCTCAAG+AGG | + | chr5_1:47976895-47976914 | Msa0734250:intron | 40.0% | |
| ACGGAATTAAGATCCTCTTG+AGG | - | chr5_1:47976911-47976930 | None:intergenic | 40.0% | |
| GAGATTGCAAAGTCTAACTC+CGG | + | chr5_1:47976936-47976955 | Msa0734250:intron | 40.0% | |
| GCATTCAATATGCAGGGATA+TGG | + | chr5_1:47977201-47977220 | Msa0734250:CDS | 40.0% | |
| AGGGATATGGCAGAAATCTT+TGG | + | chr5_1:47977214-47977233 | Msa0734250:CDS | 40.0% | |
| GGAATGTTTAGATCCAATGG+GGG | + | chr5_1:47977246-47977265 | Msa0734250:CDS | 40.0% | |
| GGAAGTGAAGAAGACTCTTA+AGG | + | chr5_1:47977347-47977366 | Msa0734250:CDS | 40.0% | |
| TGAAGAAGACTCTTAAGGTG+AGG | + | chr5_1:47977352-47977371 | Msa0734250:intron | 40.0% | |
| ! | TCCACCAGATTTTTATGCCA+GGG | + | chr5_1:47977514-47977533 | Msa0734250:CDS | 40.0% |
| CTTACCCTGGCATAAAAATC+TGG | - | chr5_1:47977521-47977540 | None:intergenic | 40.0% | |
| CGTATCAAAATCGAGTTAGC+AGG | + | chr5_1:47978067-47978086 | Msa0734250:intron | 40.0% | |
| ATCACTGTGAGTCAAGATCA+GGG | + | chr5_1:47978094-47978113 | Msa0734250:intron | 40.0% | |
| GGCCGTGTTAACAAATTTGT+TGG | + | chr5_1:47978115-47978134 | Msa0734250:intron | 40.0% | |
| !! | GTTAACAAATTTGTTGGCCC+TGG | + | chr5_1:47978121-47978140 | Msa0734250:intron | 40.0% |
| !! | ATGATGGAGTTTGGTGATGT+GGG | - | chr5_1:47978315-47978334 | None:intergenic | 40.0% |
| !! | TATGATGGAGTTTGGTGATG+TGG | - | chr5_1:47978316-47978335 | None:intergenic | 40.0% |
| GGTTATGATGAATCTTGACC+AGG | - | chr5_1:47978503-47978522 | None:intergenic | 40.0% | |
| ! | CATGCAAGAAGGGTTTGTTT+AGG | - | chr5_1:47978841-47978860 | None:intergenic | 40.0% |
| ! | TACATGTCGATTACTGATGC+AGG | + | chr5_1:47978865-47978884 | Msa0734250:intron | 40.0% |
| TTCTTCATTGTTACGTCAGC+TGG | - | chr5_1:47978908-47978927 | None:intergenic | 40.0% | |
| AGGATAACTGGATACCTACT+TGG | + | chr5_1:47978942-47978961 | Msa0734250:CDS | 40.0% | |
| GGATAACTGGATACCTACTT+GGG | + | chr5_1:47978943-47978962 | Msa0734250:CDS | 40.0% | |
| GTGAATTCTTCTTCCCAAGT+AGG | - | chr5_1:47978959-47978978 | None:intergenic | 40.0% | |
| CAAGTTCAGGCACAGTTAAA+GGG | - | chr5_1:47978985-47979004 | None:intergenic | 40.0% | |
| ACTCTAAGCAAAGCAAGTTC+AGG | - | chr5_1:47978998-47979017 | None:intergenic | 40.0% | |
| ! | TGAACTTGCTTTGCTTAGAG+TGG | + | chr5_1:47978997-47979016 | Msa0734250:CDS | 40.0% |
| !! | TCTGAGACAGATGATTTTGC+AGG | + | chr5_1:47979040-47979059 | Msa0734250:CDS | 40.0% |
| GTTCCACTTTACGATCGAAA+AGG | + | chr5_1:47979109-47979128 | Msa0734250:CDS | 40.0% | |
| ! | TCTCCTTTTCGATCGTAAAG+TGG | - | chr5_1:47979115-47979134 | None:intergenic | 40.0% |
| ! | GAGAGAAGTACAACTCAGTT+AGG | + | chr5_1:47979131-47979150 | Msa0734250:CDS | 40.0% |
| TTGAGTTAGACGGAAGGACA+AGG | + | chr5_1:47973068-47973087 | Msa0734250:intron | 45.0% | |
| AGAGAGATTGAGACAGAAGG+TGG | + | chr5_1:47973094-47973113 | Msa0734250:five_prime_UTR | 45.0% | |
| ACCTTCGGGTAGAAGAAGAA+AGG | + | chr5_1:47973388-47973407 | Msa0734250:five_prime_UTR | 45.0% | |
| ACCTTTCTTCTTCTACCCGA+AGG | - | chr5_1:47973392-47973411 | None:intergenic | 45.0% | |
| ATAGAGTCTGCGTGTGTTTC+CGG | + | chr5_1:47973435-47973454 | Msa0734250:CDS | 45.0% | |
| GAACCTCCACAAGAAACCTT+CGG | - | chr5_1:47973559-47973578 | None:intergenic | 45.0% | |
| AAGGTTTCTTGTGGAGGTTC+AGG | + | chr5_1:47973559-47973578 | Msa0734250:CDS | 45.0% | |
| AGGTTTCTTGTGGAGGTTCA+GGG | + | chr5_1:47973560-47973579 | Msa0734250:CDS | 45.0% | |
| !! | GGGTGAGGTTGATGATAAGA+AGG | + | chr5_1:47973580-47973599 | Msa0734250:CDS | 45.0% |
| ! | GGATGGACTTGATACACAGA+AGG | + | chr5_1:47973601-47973620 | Msa0734250:CDS | 45.0% |
| TGGACTTGATACACAGAAGG+TGG | + | chr5_1:47973604-47973623 | Msa0734250:CDS | 45.0% | |
| ACTTGATACACAGAAGGTGG+TGG | + | chr5_1:47973607-47973626 | Msa0734250:CDS | 45.0% | |
| GTTGACCCAATCAACTGAGT+CGG | + | chr5_1:47974032-47974051 | Msa0734250:intron | 45.0% | |
| ! | TCCTTGCTATAAGGACATCG+AGG | + | chr5_1:47974161-47974180 | Msa0734250:intron | 45.0% |
| TCCTCGATGTCCTTATAGCA+AGG | - | chr5_1:47974165-47974184 | None:intergenic | 45.0% | |
| TACAGCCACTGTTGGTCAAT+GGG | - | chr5_1:47974259-47974278 | None:intergenic | 45.0% | |
| GGTCATAACTCCTATCTCAC+TGG | + | chr5_1:47974817-47974836 | Msa0734250:CDS | 45.0% | |
| !! | GTTCATGGTTCGGTTTACGA+AGG | + | chr5_1:47975119-47975138 | Msa0734250:intron | 45.0% |
| TCCGGAATGGAACTGGTATA+TGG | + | chr5_1:47975212-47975231 | Msa0734250:intron | 45.0% | |
| CCCATATACCAGTTCCATTC+CGG | - | chr5_1:47975216-47975235 | None:intergenic | 45.0% | |
| CCGGAATGGAACTGGTATAT+GGG | + | chr5_1:47975213-47975232 | Msa0734250:intron | 45.0% | |
| TTGTGGTGACCTGTGAATGT+AGG | + | chr5_1:47975698-47975717 | Msa0734250:intron | 45.0% | |
| ! | CTTGAAGGTCTGAGGTAAGA+TGG | - | chr5_1:47975822-47975841 | None:intergenic | 45.0% |
| ! | AGCTTTTGCTTGAAGGTCTG+AGG | - | chr5_1:47975830-47975849 | None:intergenic | 45.0% |
| CATGCCTTTAGTCCTCAAAG+AGG | - | chr5_1:47975931-47975950 | None:intergenic | 45.0% | |
| TGATGAAGACGAATGGGGAA+AGG | + | chr5_1:47976308-47976327 | Msa0734250:CDS | 45.0% | |
| CGTCTAATCGCTATTCATGC+TGG | + | chr5_1:47976684-47976703 | Msa0734250:CDS | 45.0% | |
| GCTTCCTTCAAACTACCCTT+AGG | - | chr5_1:47976714-47976733 | None:intergenic | 45.0% | |
| ! | AATCAGTGGCTTGTAGTTCG+AGG | - | chr5_1:47977154-47977173 | None:intergenic | 45.0% |
| TCGAACTACAAGCCACTGAT+TGG | + | chr5_1:47977153-47977172 | Msa0734250:CDS | 45.0% | |
| TTTAGATCCAATGGGGGATG+TGG | + | chr5_1:47977252-47977271 | Msa0734250:CDS | 45.0% | |
| ! | CTCCACCAGATTTTTATGCC+AGG | + | chr5_1:47977513-47977532 | Msa0734250:CDS | 45.0% |
| ACCCTGGCATAAAAATCTGG+TGG | - | chr5_1:47977518-47977537 | None:intergenic | 45.0% | |
| CATCACTGTGAGTCAAGATC+AGG | + | chr5_1:47978093-47978112 | Msa0734250:intron | 45.0% | |
| TGGCCCTGGTTTAGATTTGA+AGG | + | chr5_1:47978135-47978154 | Msa0734250:intron | 45.0% | |
| GGCCCTGGTTTAGATTTGAA+GGG | + | chr5_1:47978136-47978155 | Msa0734250:intron | 45.0% | |
| AGTGGCGTGTGCATTTATGA+TGG | - | chr5_1:47978331-47978350 | None:intergenic | 45.0% | |
| CTGTAATCGTCGAAAGGAAG+TGG | - | chr5_1:47978744-47978763 | None:intergenic | 45.0% | |
| ! | TGTCGATTACTGATGCAGGT+TGG | + | chr5_1:47978869-47978888 | Msa0734250:intron | 45.0% |
| TTCAGGCACAGTTAAAGGGA+AGG | - | chr5_1:47978981-47979000 | None:intergenic | 45.0% | |
| GCAAGTTCAGGCACAGTTAA+AGG | - | chr5_1:47978986-47979005 | None:intergenic | 45.0% | |
| !!! | ATTTAAAAAAAAAATGTTTT+TGG | + | chr5_1:47978419-47978438 | Msa0734250:intron | 5.0% |
| !!! | TTTAAAAAAAAAATGTTTTT+GGG | + | chr5_1:47978420-47978439 | Msa0734250:intron | 5.0% |
| AAGATCTCCCTGACTTCCTG+AGG | - | chr5_1:47973491-47973510 | None:intergenic | 50.0% | |
| ! | TGATACACAGAAGGTGGTGG+AGG | + | chr5_1:47973610-47973629 | Msa0734250:CDS | 50.0% |
| !! | TGGAGGAAGTGTTGCAGAAG+CGG | + | chr5_1:47973627-47973646 | Msa0734250:CDS | 50.0% |
| CATGGTAGTAGTCGTCGTCA+CGG | + | chr5_1:47974002-47974021 | Msa0734250:intron | 50.0% | |
| ! | CCGAACCGACTCAGTTGATT+GGG | - | chr5_1:47974040-47974059 | None:intergenic | 50.0% |
| CCCAATCAACTGAGTCGGTT+CGG | + | chr5_1:47974037-47974056 | Msa0734250:intron | 50.0% | |
| TGTTGCCCATTGACCAACAG+TGG | + | chr5_1:47974251-47974270 | Msa0734250:intron | 50.0% | |
| CTACAGCCACTGTTGGTCAA+TGG | - | chr5_1:47974260-47974279 | None:intergenic | 50.0% | |
| ! | GTGTTCTCAATCGCGGATTG+TGG | - | chr5_1:47974428-47974447 | None:intergenic | 50.0% |
| GTGGGATTGAACAATGCACC+AGG | + | chr5_1:47974519-47974538 | Msa0734250:intron | 50.0% | |
| ! | CTTCTGCTTTGGACCGTTCA+TGG | + | chr5_1:47975104-47975123 | Msa0734250:intron | 50.0% |
| ! | GCTTTGGACCGTTCATGGTT+CGG | + | chr5_1:47975109-47975128 | Msa0734250:intron | 50.0% |
| TGGTAAGTCCGGAATGGAAC+TGG | + | chr5_1:47975205-47975224 | Msa0734250:intron | 50.0% | |
| ! | CCTGAGCAGCTTTTGCTTGA+AGG | - | chr5_1:47975837-47975856 | None:intergenic | 50.0% |
| CCTTCAAGCAAAAGCTGCTC+AGG | + | chr5_1:47975834-47975853 | Msa0734250:intron | 50.0% | |
| CGCTCGGAACTGATCTTATC+AGG | + | chr5_1:47976805-47976824 | Msa0734250:intron | 50.0% | |
| ! | ACTACAAGCCACTGATTGGC+TGG | + | chr5_1:47977157-47977176 | Msa0734250:CDS | 50.0% |
| CTGGATGCATGGTGCTCAAA+TGG | + | chr5_1:47977176-47977195 | Msa0734250:CDS | 50.0% | |
| CACATAACCACATCCCCCAT+TGG | - | chr5_1:47977262-47977281 | None:intergenic | 50.0% | |
| TGTGGGAGATGGATGGAGTA+TGG | + | chr5_1:47977460-47977479 | Msa0734250:CDS | 50.0% | |
| TTTGGGCCCCCAAAAAATCG+AGG | + | chr5_1:47978437-47978456 | Msa0734250:intron | 50.0% | |
| !!! | ACTGGGCCTCGATTTTTTGG+GGG | - | chr5_1:47978446-47978465 | None:intergenic | 50.0% |
| !!! | CACTGGGCCTCGATTTTTTG+GGG | - | chr5_1:47978447-47978466 | None:intergenic | 50.0% |
| !!! | GCACTGGGCCTCGATTTTTT+GGG | - | chr5_1:47978448-47978467 | None:intergenic | 50.0% |
| TGATGAATCTTGACCAGGGC+CGG | - | chr5_1:47978498-47978517 | None:intergenic | 50.0% | |
| GATCGTAAAGTGGAACGGCA+CGG | - | chr5_1:47979105-47979124 | None:intergenic | 50.0% | |
| GGAGAAGGAGGTGAAGAGAC+TGG | - | chr5_1:47973229-47973248 | None:intergenic | 55.0% | |
| TTCCGGCGGAGGTTTAAGTC+CGG | + | chr5_1:47973452-47973471 | Msa0734250:CDS | 55.0% | |
| GTTTAAGTCCGGAGAGGCAG+TGG | + | chr5_1:47973463-47973482 | Msa0734250:CDS | 55.0% | |
| AGTGGCACCTCAGGAAGTCA+GGG | + | chr5_1:47973481-47973500 | Msa0734250:CDS | 55.0% | |
| AGAAACCTTCGGAGCTGGTC+CGG | - | chr5_1:47973548-47973567 | None:intergenic | 55.0% | |
| CCACAAGAAACCTTCGGAGC+TGG | - | chr5_1:47973553-47973572 | None:intergenic | 55.0% | |
| CCAGCTCCGAAGGTTTCTTG+TGG | + | chr5_1:47973550-47973569 | Msa0734250:CDS | 55.0% | |
| GCTCCGAAGGTTTCTTGTGG+AGG | + | chr5_1:47973553-47973572 | Msa0734250:CDS | 55.0% | |
| TCTTGTGGAGGTTCAGGGTG+AGG | + | chr5_1:47973565-47973584 | Msa0734250:CDS | 55.0% | |
| ! | GCCGAACCGACTCAGTTGAT+TGG | - | chr5_1:47974041-47974060 | None:intergenic | 55.0% |
| CTACAGGCTACAGCCACTGT+TGG | - | chr5_1:47974267-47974286 | None:intergenic | 55.0% | |
| GAAAAGGCTGCTGAGTCGCT+CGG | + | chr5_1:47976789-47976808 | Msa0734250:intron | 55.0% | |
| CGTAGTGTCAGCTCAGTAGC+CGG | - | chr5_1:47976958-47976977 | None:intergenic | 55.0% | |
| GAGGTCACACGTGTACCCTT+CGG | - | chr5_1:47977132-47977151 | None:intergenic | 55.0% | |
| ! | CAGTGGCTTGTAGTTCGAGG+AGG | - | chr5_1:47977151-47977170 | None:intergenic | 55.0% |
| CCATGCATCCAGCCAATCAG+TGG | - | chr5_1:47977168-47977187 | None:intergenic | 55.0% | |
| ! | CCACTGATTGGCTGGATGCA+TGG | + | chr5_1:47977165-47977184 | Msa0734250:CDS | 55.0% |
| ! | AGCAGCTCGAAGTGCTTCAG+TGG | - | chr5_1:47978349-47978368 | None:intergenic | 55.0% |
| !!! | GGCACTGGGCCTCGATTTTT+TGG | - | chr5_1:47978449-47978468 | None:intergenic | 55.0% |
| CGAAGCTGGGATATGGCACT+GGG | - | chr5_1:47978463-47978482 | None:intergenic | 55.0% | |
| TCGAAGCTGGGATATGGCAC+TGG | - | chr5_1:47978464-47978483 | None:intergenic | 55.0% | |
| GTGCCATATCCCAGCTTCGA+CGG | + | chr5_1:47978464-47978483 | Msa0734250:intron | 55.0% | |
| TGCCATATCCCAGCTTCGAC+GGG | + | chr5_1:47978465-47978484 | Msa0734250:intron | 55.0% | |
| ! | CTGATGCAGGTTGGCATAGC+TGG | + | chr5_1:47978878-47978897 | Msa0734250:intron | 55.0% |
| GAGTCTGCGTGTGTTTCCGG+CGG | + | chr5_1:47973438-47973457 | Msa0734250:CDS | 60.0% | |
| CTCCGGACTTAAACCTCCGC+CGG | - | chr5_1:47973457-47973476 | None:intergenic | 60.0% | |
| GCGGAGGTTTAAGTCCGGAG+AGG | + | chr5_1:47973457-47973476 | Msa0734250:CDS | 60.0% | |
| CAGTGGCACCTCAGGAAGTC+AGG | + | chr5_1:47973480-47973499 | Msa0734250:CDS | 60.0% | |
| GAGCTGGTCCGGAGTCATGT+GGG | - | chr5_1:47973537-47973556 | None:intergenic | 60.0% | |
| AGCCCGTCGAAGCTGGGATA+TGG | - | chr5_1:47978470-47978489 | None:intergenic | 60.0% | |
| ! | ATCCCAGCTTCGACGGGCTT+TGG | + | chr5_1:47978471-47978490 | Msa0734250:intron | 60.0% |
| ! | TCCCAGCTTCGACGGGCTTT+GGG | + | chr5_1:47978472-47978491 | Msa0734250:intron | 60.0% |
| TCTGCGTGTGTTTCCGGCGG+AGG | + | chr5_1:47973441-47973460 | Msa0734250:CDS | 65.0% | |
| !! | CTGAGGTGCCACTGCCTCTC+CGG | - | chr5_1:47973474-47973493 | None:intergenic | 65.0% |
| AGGTGGGGCCCACATGACTC+CGG | + | chr5_1:47973526-47973545 | Msa0734250:CDS | 65.0% | |
| GGAGCTGGTCCGGAGTCATG+TGG | - | chr5_1:47973538-47973557 | None:intergenic | 65.0% | |
| TGACTCCGGACCAGCTCCGA+AGG | + | chr5_1:47973540-47973559 | Msa0734250:CDS | 65.0% | |
| GCCCAAAGCCCGTCGAAGCT+GGG | - | chr5_1:47978476-47978495 | None:intergenic | 65.0% | |
| !! | AGCTTCGACGGGCTTTGGGC+CGG | + | chr5_1:47978476-47978495 | Msa0734250:intron | 65.0% |
| CGGAGAGGCAGTGGCACCTC+AGG | + | chr5_1:47973472-47973491 | Msa0734250:CDS | 70.0% | |
| GGCCCAAAGCCCGTCGAAGC+TGG | - | chr5_1:47978477-47978496 | None:intergenic | 70.0% | |
| !!! | GACGGGCTTTGGGCCGGCCC+TGG | + | chr5_1:47978482-47978501 | Msa0734250:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 47972932 | 47979180 | 47972932 | ID=Msa0734250;Name=Msa0734250 |
| chr5_1 | mRNA | 47972932 | 47979180 | 47972932 | ID=Msa0734250-mRNA-1;Parent=Msa0734250;Name=Msa0734250-mRNA-1;_AED=0.12;_eAED=0.13;_QI=446|0.5|0.66|1|0.87|0.77|9|0|546 |
| chr5_1 | exon | 47972932 | 47973032 | 47972932 | ID=Msa0734250-mRNA-1:exon:13711;Parent=Msa0734250-mRNA-1 |
| chr5_1 | exon | 47973080 | 47973745 | 47973080 | ID=Msa0734250-mRNA-1:exon:13712;Parent=Msa0734250-mRNA-1 |
| chr5_1 | exon | 47974769 | 47974965 | 47974769 | ID=Msa0734250-mRNA-1:exon:13713;Parent=Msa0734250-mRNA-1 |
| chr5_1 | exon | 47975720 | 47975798 | 47975720 | ID=Msa0734250-mRNA-1:exon:13714;Parent=Msa0734250-mRNA-1 |
| chr5_1 | exon | 47976123 | 47976371 | 47976123 | ID=Msa0734250-mRNA-1:exon:13715;Parent=Msa0734250-mRNA-1 |
| chr5_1 | exon | 47976621 | 47976802 | 47976621 | ID=Msa0734250-mRNA-1:exon:13716;Parent=Msa0734250-mRNA-1 |
| chr5_1 | exon | 47977098 | 47977368 | 47977098 | ID=Msa0734250-mRNA-1:exon:13717;Parent=Msa0734250-mRNA-1 |
| chr5_1 | exon | 47977449 | 47977535 | 47977449 | ID=Msa0734250-mRNA-1:exon:13718;Parent=Msa0734250-mRNA-1 |
| chr5_1 | exon | 47978926 | 47979180 | 47978926 | ID=Msa0734250-mRNA-1:exon:13719;Parent=Msa0734250-mRNA-1 |
| chr5_1 | five_prime_UTR | 47972932 | 47973032 | 47972932 | ID=Msa0734250-mRNA-1:five_prime_utr;Parent=Msa0734250-mRNA-1 |
| chr5_1 | five_prime_UTR | 47973080 | 47973424 | 47973080 | ID=Msa0734250-mRNA-1:five_prime_utr;Parent=Msa0734250-mRNA-1 |
| chr5_1 | CDS | 47973425 | 47973745 | 47973425 | ID=Msa0734250-mRNA-1:cds;Parent=Msa0734250-mRNA-1 |
| chr5_1 | CDS | 47974769 | 47974965 | 47974769 | ID=Msa0734250-mRNA-1:cds;Parent=Msa0734250-mRNA-1 |
| chr5_1 | CDS | 47975720 | 47975798 | 47975720 | ID=Msa0734250-mRNA-1:cds;Parent=Msa0734250-mRNA-1 |
| chr5_1 | CDS | 47976123 | 47976371 | 47976123 | ID=Msa0734250-mRNA-1:cds;Parent=Msa0734250-mRNA-1 |
| chr5_1 | CDS | 47976621 | 47976802 | 47976621 | ID=Msa0734250-mRNA-1:cds;Parent=Msa0734250-mRNA-1 |
| chr5_1 | CDS | 47977098 | 47977368 | 47977098 | ID=Msa0734250-mRNA-1:cds;Parent=Msa0734250-mRNA-1 |
| chr5_1 | CDS | 47977449 | 47977535 | 47977449 | ID=Msa0734250-mRNA-1:cds;Parent=Msa0734250-mRNA-1 |
| chr5_1 | CDS | 47978926 | 47979180 | 47978926 | ID=Msa0734250-mRNA-1:cds;Parent=Msa0734250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
