Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0654610 | XP_003608318.2 | 98.113 | 318 | 6 | 0 | 1 | 318 | 87 | 404 | 0.0 | 639 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0654610 | sp|Q9LPM9|BCAT6_ARATH | 63.950 | 319 | 112 | 2 | 1 | 318 | 36 | 352 | 1.86e-153 | 437 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0654600 | Msa0654610 | 0.802098 | 6.591290e-49 | -8.615850e-47 |
| Msa0654610 | Msa0708020 | 0.804718 | 1.888722e-49 | -8.615850e-47 |
| Msa0654610 | Msa1220720 | 0.825238 | 5.227795e-54 | -8.615850e-47 |
| Msa0654610 | Msa1250660 | 0.802179 | 6.344288e-49 | -8.615850e-47 |
| Msa0654610 | Msa1265570 | 0.824274 | 8.819685e-54 | -8.615850e-47 |
| Msa0654610 | Msa1334670 | 0.828157 | 1.050674e-54 | -8.615850e-47 |
| Msa0654610 | Msa1365230 | 0.823324 | 1.472829e-53 | -8.615850e-47 |
| Msa0654610 | Msa1381900 | 0.806984 | 6.307044e-50 | -8.615850e-47 |
| Msa0654610 | Msa1381910 | 0.980011 | 3.034583e-149 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0654610 | MtrunA17_Chr4g0049241 | 98.113 | 318 | 6 | 0 | 1 | 318 | 87 | 404 | 0.0 | 639 |
| Msa0654610 | MtrunA17_Chr3g0135321 | 60.938 | 320 | 121 | 2 | 1 | 318 | 70 | 387 | 2.04e-145 | 414 |
| Msa0654610 | MtrunA17_Chr5g0400811 | 60.502 | 319 | 122 | 2 | 1 | 317 | 91 | 407 | 3.41e-140 | 402 |
| Msa0654610 | MtrunA17_Chr4g0049231 | 56.875 | 320 | 134 | 2 | 1 | 318 | 40 | 357 | 1.09e-134 | 386 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0654610 | AT1G50110.2 | 63.950 | 319 | 112 | 2 | 1 | 318 | 1 | 317 | 6.54e-155 | 436 |
| Msa0654610 | AT1G50110.1 | 63.950 | 319 | 112 | 2 | 1 | 318 | 36 | 352 | 1.89e-154 | 437 |
| Msa0654610 | AT1G50090.1 | 63.009 | 319 | 115 | 2 | 1 | 318 | 39 | 355 | 7.04e-151 | 428 |
| Msa0654610 | AT1G10070.3 | 60.938 | 320 | 121 | 2 | 1 | 318 | 1 | 318 | 9.10e-150 | 423 |
| Msa0654610 | AT1G10070.1 | 60.938 | 320 | 121 | 2 | 1 | 318 | 71 | 388 | 7.05e-149 | 424 |
| Msa0654610 | AT1G10070.2 | 60.938 | 320 | 121 | 2 | 1 | 318 | 71 | 388 | 7.05e-149 | 424 |
| Msa0654610 | AT1G10060.3 | 61.442 | 319 | 119 | 2 | 1 | 317 | 1 | 317 | 1.61e-143 | 407 |
| Msa0654610 | AT1G10060.2 | 61.442 | 319 | 119 | 2 | 1 | 317 | 67 | 383 | 2.24e-142 | 407 |
| Msa0654610 | AT5G65780.1 | 60.625 | 320 | 121 | 3 | 1 | 317 | 97 | 414 | 4.15e-141 | 405 |
| Msa0654610 | AT1G10060.5 | 61.755 | 319 | 118 | 2 | 1 | 317 | 163 | 479 | 6.63e-141 | 407 |
| Msa0654610 | AT3G49680.1 | 61.059 | 321 | 119 | 4 | 1 | 317 | 94 | 412 | 6.62e-140 | 402 |
| Msa0654610 | AT3G49680.2 | 61.059 | 321 | 119 | 4 | 1 | 317 | 92 | 410 | 1.03e-139 | 401 |
| Msa0654610 | AT3G19710.1 | 56.426 | 319 | 136 | 2 | 1 | 318 | 35 | 351 | 2.78e-139 | 398 |
| Msa0654610 | AT1G10060.7 | 62.676 | 284 | 102 | 2 | 1 | 282 | 67 | 348 | 7.56e-127 | 367 |
| Msa0654610 | AT1G10060.4 | 63.028 | 284 | 101 | 2 | 1 | 282 | 163 | 444 | 1.58e-125 | 367 |
| Msa0654610 | AT1G10060.1 | 61.638 | 232 | 85 | 2 | 1 | 230 | 67 | 296 | 9.94e-101 | 298 |
| Msa0654610 | AT1G10060.6 | 61.638 | 232 | 85 | 2 | 1 | 230 | 163 | 392 | 1.68e-99 | 299 |
Find 107 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGTTCAATTTATTATAAA+TGG | 0.130290 | 4_3:+62824864 | None:intergenic |
| ATTTATTATAAATGGAAATT+TGG | 0.146306 | 4_3:+62824872 | None:intergenic |
| CGCCATTGATTTGGGTTATA+AGG | 0.149101 | 4_3:-62825534 | Msa0654610:intron |
| AATACATACCCAACGTTTAT+TGG | 0.212789 | 4_3:+62826759 | None:intergenic |
| GTCCAAGTAGATTGAGAAAT+TGG | 0.258521 | 4_3:-62825036 | Msa0654610:exon |
| CATAGACATCGCCATTGATT+TGG | 0.259021 | 4_3:-62825543 | Msa0654610:CDS |
| CATAATTTCCTCCACTGATA+TGG | 0.286519 | 4_3:+62825381 | None:intergenic |
| CTAATCATCAATAGTATGTT+TGG | 0.287341 | 4_3:-62824970 | Msa0654610:three_prime_UTR |
| TGTTGCATCTGTAACATATA+AGG | 0.310394 | 4_3:-62825311 | Msa0654610:CDS |
| GGAAAGGGACGCTTTATCTT+AGG | 0.336223 | 4_3:-62826436 | Msa0654610:CDS |
| CAAACATACTATTGATGATT+AGG | 0.337825 | 4_3:+62824971 | None:intergenic |
| TTGTTCTTGGATTCAGCAAC+TGG | 0.355547 | 4_3:-62825812 | Msa0654610:CDS |
| ATAGACATCGCCATTGATTT+GGG | 0.368721 | 4_3:-62825542 | Msa0654610:CDS |
| GAGAAGAGAAATAAAGATCT+AGG | 0.380104 | 4_3:+62828062 | None:intergenic |
| ACCTCGTGGTACTTTCCAAC+AGG | 0.385531 | 4_3:+62826338 | None:intergenic |
| TATGGGAAGCTGACATCAAT+TGG | 0.391396 | 4_3:-62827577 | Msa0654610:intron |
| GTTTGAATGGAGGTTGTTGT+AGG | 0.395642 | 4_3:+62828036 | None:intergenic |
| AGGCCTTTGCTGATGGGAAC+AGG | 0.410408 | 4_3:-62826416 | Msa0654610:CDS |
| GCTGCTGGTATCATAAACTA+TGG | 0.421561 | 4_3:-62827445 | Msa0654610:CDS |
| TATTTATAGGGAATCTTTGA+GGG | 0.423848 | 4_3:-62826931 | Msa0654610:intron |
| TGCCAATTTCTCAATCTACT+TGG | 0.427171 | 4_3:+62825034 | None:intergenic |
| TTATTTATAGGGAATCTTTG+AGG | 0.451052 | 4_3:-62826932 | Msa0654610:intron |
| ATACTGGATGGAATACAAAC+AGG | 0.454406 | 4_3:-62825087 | Msa0654610:CDS |
| TTATCTTAGGCCTTTGCTGA+TGG | 0.459569 | 4_3:-62826423 | Msa0654610:CDS |
| TATAAATGGAAATTTGGATC+CGG | 0.459633 | 4_3:+62824878 | None:intergenic |
| ATAGCTGGCAGTGGTGGAAC+AGG | 0.460699 | 4_3:-62826146 | Msa0654610:CDS |
| CAATGTTTCCATAGCGAATG+AGG | 0.461717 | 4_3:+62827479 | None:intergenic |
| TCTCCTCTGGTCGGAAAAGA+AGG | 0.461828 | 4_3:+62826875 | None:intergenic |
| TATCTTAGGCCTTTGCTGAT+GGG | 0.462963 | 4_3:-62826422 | Msa0654610:CDS |
| CATGTCATGAAATGCACAAA+AGG | 0.463428 | 4_3:-62827523 | Msa0654610:CDS |
| AGAATAGATCCATCTATTGC+CGG | 0.463647 | 4_3:+62825590 | None:intergenic |
| CTCATTTATTGCTCCCCTGT+TGG | 0.463936 | 4_3:-62826353 | Msa0654610:CDS |
| TTGAAACAGGTACCTCCTCC+AGG | 0.466899 | 4_3:-62826458 | Msa0654610:intron |
| AAGAAGGATTCGCCCATCTT+CGG | 0.471480 | 4_3:+62826891 | None:intergenic |
| AGTTCTTGCCAATAAACGTT+GGG | 0.472787 | 4_3:-62826767 | Msa0654610:intron |
| GAATGCTCTACGCATGAAGA+TGG | 0.475110 | 4_3:-62826854 | Msa0654610:CDS |
| ATCAATGGCGATGTCTATGA+TGG | 0.477143 | 4_3:+62825547 | None:intergenic |
| GATTTCTGTTGCAAACATAC+AGG | 0.479435 | 4_3:-62824948 | Msa0654610:three_prime_UTR |
| TGCAGAGCTGAATATAAAAC+AGG | 0.487998 | 4_3:-62825141 | Msa0654610:intron |
| AGATAAAGCGTCCCTTTCCC+TGG | 0.488127 | 4_3:+62826440 | None:intergenic |
| AAAGCATATAGAACCGAAGA+TGG | 0.494591 | 4_3:-62826904 | Msa0654610:CDS |
| TGTACTCAGGTGATGGAGCC+GGG | 0.495014 | 4_3:+62826381 | None:intergenic |
| AACAGGAGCTGCATTAGGCC+CGG | 0.496200 | 4_3:-62826399 | Msa0654610:CDS |
| ATAGATGGATCTATTCTGCC+TGG | 0.500850 | 4_3:-62825584 | Msa0654610:CDS |
| TACCTTATAACCCAAATCAA+TGG | 0.507754 | 4_3:+62825532 | None:intergenic |
| GTGTACTCAGGTGATGGAGC+CGG | 0.507861 | 4_3:+62826380 | None:intergenic |
| AAGCTGCTACTAAGTTTGAA+TGG | 0.509769 | 4_3:+62828023 | None:intergenic |
| TGTTGCAAACATACAGGTAG+AGG | 0.514094 | 4_3:-62824942 | Msa0654610:three_prime_UTR |
| AATGCTCTACGCATGAAGAT+GGG | 0.515215 | 4_3:-62826853 | Msa0654610:CDS |
| ATGCGTAGAGCATTCTCCTC+TGG | 0.524923 | 4_3:+62826862 | None:intergenic |
| ATGGGAACAGGAGCTGCATT+AGG | 0.526658 | 4_3:-62826404 | Msa0654610:CDS |
| TAGATGGATCTATTCTGCCT+GGG | 0.527089 | 4_3:-62825583 | Msa0654610:CDS |
| CGATCAATAGCTGGCAGTGG+TGG | 0.529542 | 4_3:-62826152 | Msa0654610:CDS |
| AGGTACCTCCTCCAGGGAAA+GGG | 0.530899 | 4_3:-62826451 | Msa0654610:CDS |
| ATGACATGCATGTAATCTGT+TGG | 0.538379 | 4_3:+62827538 | None:intergenic |
| CAGGTACCTCCTCCAGGGAA+AGG | 0.544439 | 4_3:-62826452 | Msa0654610:CDS |
| ATGGGAAGCTGACATCAATT+GGG | 0.545389 | 4_3:-62827576 | Msa0654610:intron |
| CAAGGATCCCTCATTCGCTA+TGG | 0.546856 | 4_3:-62827487 | Msa0654610:CDS |
| AAATTTCATCGATCAATAGC+TGG | 0.549508 | 4_3:-62826161 | Msa0654610:CDS |
| TAGTTTATGATACCAGCAGC+CGG | 0.554250 | 4_3:+62827448 | None:intergenic |
| CGGAAGACTAAACTTAAAAG+TGG | 0.556487 | 4_3:-62826189 | Msa0654610:CDS |
| AGCGTCCCTTTCCCTGGAGG+AGG | 0.558749 | 4_3:+62826446 | None:intergenic |
| ATTGAGATAAGCCCGGCTGC+TGG | 0.560098 | 4_3:-62827460 | Msa0654610:CDS |
| TAAAGATCTAGGAAAAGAGA+AGG | 0.563696 | 4_3:+62828073 | None:intergenic |
| TCAACAAACTGCTCAACTGA+TGG | 0.571107 | 4_3:+62826805 | None:intergenic |
| CTGTAACATATAAGGAAACA+AGG | 0.572784 | 4_3:-62825303 | Msa0654610:intron |
| CAAGACATCAGAAAATCCAT+TGG | 0.572958 | 4_3:+62825832 | None:intergenic |
| TGGTATCATAAACTATGGAC+AGG | 0.579973 | 4_3:-62827440 | Msa0654610:intron |
| TAAATGAGAAATGTGTACTC+AGG | 0.581598 | 4_3:+62826368 | None:intergenic |
| GTAACTGAAGCAAAAGCCAA+TGG | 0.582493 | 4_3:-62825848 | Msa0654610:CDS |
| ATGCTCTACGCATGAAGATG+GGG | 0.583009 | 4_3:-62826852 | Msa0654610:CDS |
| AGTTTATGATACCAGCAGCC+GGG | 0.586157 | 4_3:+62827449 | None:intergenic |
| TGGAAACATTGAGATAAGCC+CGG | 0.589471 | 4_3:-62827467 | Msa0654610:CDS |
| AAATTACAGTATAATATGGG+TGG | 0.593251 | 4_3:-62827645 | Msa0654610:intron |
| AAACTACGAGGAATACTGGA+TGG | 0.599158 | 4_3:-62825099 | Msa0654610:CDS |
| AATACAAACAGGGCGTATTG+AGG | 0.599236 | 4_3:-62825076 | Msa0654610:CDS |
| GCTGGCAGTGGTGGAACAGG+AGG | 0.602903 | 4_3:-62826143 | Msa0654610:CDS |
| AAGCATATAGAACCGAAGAT+GGG | 0.603146 | 4_3:-62826903 | Msa0654610:CDS |
| GTGTGTGAATCTGCTTTGTG+TGG | 0.604347 | 4_3:-62824816 | Msa0654610:three_prime_UTR |
| CATCGATCAATAGCTGGCAG+TGG | 0.604641 | 4_3:-62826155 | Msa0654610:CDS |
| GCTCCTGTTCCCATCAGCAA+AGG | 0.605225 | 4_3:+62826413 | None:intergenic |
| GTGCAATATATTTGTTGTGA+AGG | 0.605535 | 4_3:-62825765 | Msa0654610:intron |
| CATAGAACGTTCCATATCAG+TGG | 0.605813 | 4_3:-62825392 | Msa0654610:CDS |
| CAATAAAACTCTGAACATGC+CGG | 0.609857 | 4_3:-62824897 | Msa0654610:three_prime_UTR |
| AGAAATGTGTACTCAGGTGA+TGG | 0.612357 | 4_3:+62826374 | None:intergenic |
| GCTGATGAAGTGTTCTGCAC+AGG | 0.613446 | 4_3:-62825355 | Msa0654610:CDS |
| CAGTTCTTGCCAATAAACGT+TGG | 0.616405 | 4_3:-62826768 | Msa0654610:CDS |
| AACTGCTCAACTGATGGTGA+TGG | 0.617477 | 4_3:+62826811 | None:intergenic |
| AATGTTTCCATAGCGAATGA+GGG | 0.619575 | 4_3:+62827480 | None:intergenic |
| AAGACTAAACTTAAAAGTGG+AGG | 0.620669 | 4_3:-62826186 | Msa0654610:CDS |
| GAGTGTTACTAATTATGCCC+CGG | 0.621088 | 4_3:-62826114 | Msa0654610:intron |
| TGCTCTACGCATGAAGATGG+GGG | 0.622391 | 4_3:-62826851 | Msa0654610:CDS |
| TGAAACAGGTACCTCCTCCA+GGG | 0.635669 | 4_3:-62826457 | Msa0654610:intron |
| CTGCTACTAAGTTTGAATGG+AGG | 0.640806 | 4_3:+62828026 | None:intergenic |
| AGAACGTTCCATATCAGTGG+AGG | 0.645297 | 4_3:-62825389 | Msa0654610:CDS |
| TACTGGATGGAATACAAACA+GGG | 0.652158 | 4_3:-62825086 | Msa0654610:CDS |
| GTAGAGCATTCTCCTCTGGT+CGG | 0.659032 | 4_3:+62826866 | None:intergenic |
| AGATGGATCTATTCTGCCTG+GGG | 0.660994 | 4_3:-62825582 | Msa0654610:CDS |
| ACAAGTATTATCATTTAACA+AGG | 0.662636 | 4_3:+62825008 | None:intergenic |
| CCTCGTGGTACTTTCCAACA+GGG | 0.667858 | 4_3:+62826339 | None:intergenic |
| TTCCAAGCTACTGGCTACAG+CGG | 0.669095 | 4_3:+62824763 | None:intergenic |
| TAAAGCGTCCCTTTCCCTGG+AGG | 0.677703 | 4_3:+62826443 | None:intergenic |
| ATATGTTACAGATGCAACAG+AGG | 0.681902 | 4_3:+62825315 | None:intergenic |
| GCAGCTTTCACACAATAACA+AGG | 0.698597 | 4_3:-62828007 | Msa0654610:intron |
| CTCGTGGTACTTTCCAACAG+GGG | 0.704735 | 4_3:+62826340 | None:intergenic |
| CCCTGTTGGAAAGTACCACG+AGG | 0.738152 | 4_3:-62826339 | Msa0654610:intron |
| GTTCTGCACAGGAACTGCAG+TGG | 0.751564 | 4_3:-62825344 | Msa0654610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTACAGTATAATAT+GGG | - | chr4_3:62825202-62825221 | Msa0654610:intron | 10.0% |
| !! | ATTTATTATAAATGGAAATT+TGG | + | chr4_3:62827981-62828000 | None:intergenic | 10.0% |
| !!! | GTAATTTTTTCATACAAAAA+CGG | + | chr4_3:62825192-62825211 | None:intergenic | 15.0% |
| !! | GAAAAAATTACAGTATAATA+TGG | - | chr4_3:62825201-62825220 | Msa0654610:intron | 15.0% |
| !!! | GTAATTTTTTCATACAAAAA+CGG | + | chr4_3:62825192-62825211 | None:intergenic | 15.0% |
| !! | TACTATATATAAAGTAAACT+TGG | - | chr4_3:62825755-62825774 | Msa0654610:intron | 15.0% |
| !! | ACTATATATAAAGTAAACTT+GGG | - | chr4_3:62825756-62825775 | Msa0654610:intron | 15.0% |
| !!! | AAAATGGTTTCTTTATTTAT+AGG | - | chr4_3:62825906-62825925 | Msa0654610:intron | 15.0% |
| !!! | AAATGGTTTCTTTATTTATA+GGG | - | chr4_3:62825907-62825926 | Msa0654610:intron | 15.0% |
| !! | ATATATAATATTCAATTTGG+AGG | + | chr4_3:62826821-62826840 | None:intergenic | 15.0% |
| !!! | TGAATATTATATATTTTCCT+TGG | - | chr4_3:62826827-62826846 | Msa0654610:CDS | 15.0% |
| !! | TATAGATGATTAATGATTTA+TGG | - | chr4_3:62827390-62827409 | Msa0654610:intron | 15.0% |
| !! | AAAAATTGACTAAAATGAAA+GGG | + | chr4_3:62827629-62827648 | None:intergenic | 15.0% |
| !! | AAAAAATTGACTAAAATGAA+AGG | + | chr4_3:62827630-62827649 | None:intergenic | 15.0% |
| !!! | TTTTAGTCAATTTTTTTTGT+TGG | - | chr4_3:62827634-62827653 | Msa0654610:intron | 15.0% |
| !! | CAAGTTCAATTTATTATAAA+TGG | + | chr4_3:62827989-62828008 | None:intergenic | 15.0% |
| !! | AAAGAATAGTGTAATGAAAT+TGG | + | chr4_3:62825076-62825095 | None:intergenic | 20.0% |
| !! | ATGAAAAAATTACAGTGATA+TGG | - | chr4_3:62825255-62825274 | Msa0654610:intron | 20.0% |
| !! | TGAAAAAATTACAGTGATAT+GGG | - | chr4_3:62825256-62825275 | Msa0654610:intron | 20.0% |
| !! | TTATATTACAGTCACAATTA+CGG | - | chr4_3:62825588-62825607 | Msa0654610:CDS | 20.0% |
| !! | CTATATATAAAGTAAACTTG+GGG | - | chr4_3:62825757-62825776 | Msa0654610:intron | 20.0% |
| !! | TATATATAAAGTAAACTTGG+GGG | - | chr4_3:62825758-62825777 | Msa0654610:intron | 20.0% |
| !! | TATAAGTAAATTCAAATCCA+TGG | + | chr4_3:62826541-62826560 | None:intergenic | 20.0% |
| !!! | CTTATATTGTTTTGTTACTA+AGG | - | chr4_3:62826555-62826574 | Msa0654610:intron | 20.0% |
| !! | AAAATAAAAATTTAACAGGG+CGG | - | chr4_3:62826641-62826660 | Msa0654610:intron | 20.0% |
| !! | GTTTCATATTAATCTTGTTA+AGG | - | chr4_3:62827220-62827239 | Msa0654610:intron | 20.0% |
| !! | AGAAAATAATGACAAACATT+GGG | + | chr4_3:62827357-62827376 | None:intergenic | 20.0% |
| !! | TAGAAAATAATGACAAACAT+TGG | + | chr4_3:62827358-62827377 | None:intergenic | 20.0% |
| !! | ACAAGTATTATCATTTAACA+AGG | + | chr4_3:62827845-62827864 | None:intergenic | 20.0% |
| ! | AACATTACATCACTTATCAA+TGG | + | chr4_3:62824875-62824894 | None:intergenic | 25.0% |
| !! | AATGTCTTTTTACGAAATCA+TGG | - | chr4_3:62824934-62824953 | Msa0654610:three_prime_UTR | 25.0% |
| !!! | TAGATTTTAGAAACTCATAG+TGG | - | chr4_3:62825008-62825027 | Msa0654610:three_prime_UTR | 25.0% |
| ! | AAATTACAGTATAATATGGG+TGG | - | chr4_3:62825205-62825224 | Msa0654610:intron | 25.0% |
| !! | AATTTAAAACCATCGTACAA+GGG | + | chr4_3:62825468-62825487 | None:intergenic | 25.0% |
| !! | CTGTAATATAACGAATTTTG+AGG | + | chr4_3:62825579-62825598 | None:intergenic | 25.0% |
| !!! | ACTAACTTTCATGTTTTAAC+AGG | + | chr4_3:62825674-62825693 | None:intergenic | 25.0% |
| !!! | TTAGTGCATTTTTAGACATT+TGG | + | chr4_3:62825888-62825907 | None:intergenic | 25.0% |
| ! | TGTCTAAAAATGCACTAAAA+TGG | - | chr4_3:62825890-62825909 | Msa0654610:intron | 25.0% |
| ! | TTATTTATAGGGAATCTTTG+AGG | - | chr4_3:62825918-62825937 | Msa0654610:intron | 25.0% |
| ! | TATTTATAGGGAATCTTTGA+GGG | - | chr4_3:62825919-62825938 | Msa0654610:intron | 25.0% |
| ! | GAAGTCATGATATTAAATTG+CGG | + | chr4_3:62826313-62826332 | None:intergenic | 25.0% |
| ! | CAATTTAATATCATGACTTC+AGG | - | chr4_3:62826313-62826332 | Msa0654610:intron | 25.0% |
| !! | AATGATGCATATTGTTACTT+AGG | - | chr4_3:62826899-62826918 | Msa0654610:CDS | 25.0% |
| ! | TTTGTAACAAAACTATGTTC+AGG | - | chr4_3:62827434-62827453 | Msa0654610:intron | 25.0% |
| ! | TTGTGTTTAGCATTATCATT+AGG | + | chr4_3:62827674-62827693 | None:intergenic | 25.0% |
| !! | TAATGATAATGCTAAACACA+AGG | - | chr4_3:62827673-62827692 | Msa0654610:intron | 25.0% |
| !! | CAAACATACTATTGATGATT+AGG | + | chr4_3:62827882-62827901 | None:intergenic | 25.0% |
| ! | CTAATCATCAATAGTATGTT+TGG | - | chr4_3:62827880-62827899 | Msa0654610:intron | 25.0% |
| ! | TATAAATGGAAATTTGGATC+CGG | + | chr4_3:62827975-62827994 | None:intergenic | 25.0% |
| TAAAGATCTAGGAAAAGAGA+AGG | + | chr4_3:62824780-62824799 | None:intergenic | 30.0% | |
| GAGAAGAGAAATAAAGATCT+AGG | + | chr4_3:62824791-62824810 | None:intergenic | 30.0% | |
| TTACATCACTTATCAATGGT+TGG | + | chr4_3:62824871-62824890 | None:intergenic | 30.0% | |
| ! | AAAGGAGAAAAGTTTTCACA+AGG | - | chr4_3:62825345-62825364 | Msa0654610:CDS | 30.0% |
| ! | CAATTTAAAACCATCGTACA+AGG | + | chr4_3:62825469-62825488 | None:intergenic | 30.0% |
| !!! | TGTACGATGGTTTTAAATTG+AGG | - | chr4_3:62825469-62825488 | Msa0654610:intron | 30.0% |
| !!! | ATGGTTTTAAATTGAGGTTG+CGG | - | chr4_3:62825475-62825494 | Msa0654610:intron | 30.0% |
| !! | GTTACACTGGTTTATATTGT+TGG | - | chr4_3:62825503-62825522 | Msa0654610:intron | 30.0% |
| CTTAAGTGTAAAGTAGTACA+AGG | + | chr4_3:62825639-62825658 | None:intergenic | 30.0% | |
| AATACATACCCAACGTTTAT+TGG | + | chr4_3:62826094-62826113 | None:intergenic | 30.0% | |
| TGAGCTTTCAAAATTGAAAC+AGG | - | chr4_3:62826379-62826398 | Msa0654610:CDS | 30.0% | |
| TAAATGAGAAATGTGTACTC+AGG | + | chr4_3:62826485-62826504 | None:intergenic | 30.0% | |
| AAGACTAAACTTAAAAGTGG+AGG | - | chr4_3:62826664-62826683 | Msa0654610:intron | 30.0% | |
| AAATTTCATCGATCAATAGC+TGG | - | chr4_3:62826689-62826708 | Msa0654610:intron | 30.0% | |
| !! | ATTTTCTGATGTCTTGTTCT+TGG | - | chr4_3:62827025-62827044 | Msa0654610:intron | 30.0% |
| AGCAACTGGAAAAAATATTG+AGG | - | chr4_3:62827052-62827071 | Msa0654610:intron | 30.0% | |
| AACTGGAAAAAATATTGAGG+AGG | - | chr4_3:62827055-62827074 | Msa0654610:intron | 30.0% | |
| !! | GTGCAATATATTTGTTGTGA+AGG | - | chr4_3:62827085-62827104 | Msa0654610:intron | 30.0% |
| GCTTCGGATATAGTAAAATA+TGG | + | chr4_3:62827179-62827198 | None:intergenic | 30.0% | |
| ACTATATCCGAAGCAAAAAT+TGG | - | chr4_3:62827185-62827204 | Msa0654610:intron | 30.0% | |
| ! | CATTAGACCAATTTTTGCTT+CGG | + | chr4_3:62827195-62827214 | None:intergenic | 30.0% |
| ! | GGAAAATGATATTTTCACTC+CGG | - | chr4_3:62827241-62827260 | Msa0654610:intron | 30.0% |
| TACCTTATAACCCAAATCAA+TGG | + | chr4_3:62827321-62827340 | None:intergenic | 30.0% | |
| AATAATGACAAACATTGGGA+GGG | + | chr4_3:62827353-62827372 | None:intergenic | 30.0% | |
| AAATAATGACAAACATTGGG+AGG | + | chr4_3:62827354-62827373 | None:intergenic | 30.0% | |
| TGTTGCATCTGTAACATATA+AGG | - | chr4_3:62827539-62827558 | Msa0654610:exon | 30.0% | |
| CTGTAACATATAAGGAAACA+AGG | - | chr4_3:62827547-62827566 | Msa0654610:exon | 30.0% | |
| AAGCTGCTACTAAGTTTGAA+TGG | + | chr4_3:62824830-62824849 | None:intergenic | 35.0% | |
| ATGACATGCATGTAATCTGT+TGG | + | chr4_3:62825315-62825334 | None:intergenic | 35.0% | |
| CATGTCATGAAATGCACAAA+AGG | - | chr4_3:62825327-62825346 | Msa0654610:CDS | 35.0% | |
| AATGTTTCCATAGCGAATGA+GGG | + | chr4_3:62825373-62825392 | None:intergenic | 35.0% | |
| TGGTATCATAAACTATGGAC+AGG | - | chr4_3:62825410-62825429 | Msa0654610:intron | 35.0% | |
| ATTACAGTCACAATTACGGT+TGG | - | chr4_3:62825592-62825611 | Msa0654610:CDS | 35.0% | |
| AAAGCATATAGAACCGAAGA+TGG | - | chr4_3:62825946-62825965 | Msa0654610:intron | 35.0% | |
| AAGCATATAGAACCGAAGAT+GGG | - | chr4_3:62825947-62825966 | Msa0654610:intron | 35.0% | |
| AGTTCTTGCCAATAAACGTT+GGG | - | chr4_3:62826083-62826102 | Msa0654610:intron | 35.0% | |
| TTTCCTCTTATCTCTCTTTG+TGG | - | chr4_3:62826112-62826131 | Msa0654610:intron | 35.0% | |
| CATTGCGATATTTCATATCG+TGG | - | chr4_3:62826191-62826210 | Msa0654610:CDS | 35.0% | |
| ATCGCCAAAAACTTATGTTG+TGG | - | chr4_3:62826268-62826287 | Msa0654610:intron | 35.0% | |
| CGGAAGACTAAACTTAAAAG+TGG | - | chr4_3:62826661-62826680 | Msa0654610:intron | 35.0% | |
| TCATATACATCACCGTTTGA+TGG | - | chr4_3:62826787-62826806 | Msa0654610:CDS | 35.0% | |
| GAGGAAAAAACACCATCAAA+CGG | + | chr4_3:62826802-62826821 | None:intergenic | 35.0% | |
| ! | TTGTGACTTGTGAAAAGTTG+TGG | - | chr4_3:62826850-62826869 | Msa0654610:CDS | 35.0% |
| ! | TGTGACTTGTGAAAAGTTGT+GGG | - | chr4_3:62826851-62826870 | Msa0654610:CDS | 35.0% |
| TTGAGAAGAAATCACATCGA+AGG | - | chr4_3:62826876-62826895 | Msa0654610:CDS | 35.0% | |
| CAAGACATCAGAAAATCCAT+TGG | + | chr4_3:62827021-62827040 | None:intergenic | 35.0% | |
| AGAATAGATCCATCTATTGC+CGG | + | chr4_3:62827263-62827282 | None:intergenic | 35.0% | |
| !! | ATAGACATCGCCATTGATTT+GGG | - | chr4_3:62827308-62827327 | Msa0654610:intron | 35.0% |
| CATAATTTCCTCCACTGATA+TGG | + | chr4_3:62827472-62827491 | None:intergenic | 35.0% | |
| ATATGTTACAGATGCAACAG+AGG | + | chr4_3:62827538-62827557 | None:intergenic | 35.0% | |
| TGCAGAGCTGAATATAAAAC+AGG | - | chr4_3:62827709-62827728 | Msa0654610:intron | 35.0% | |
| TGAAAAACTACGAGGAATAC+TGG | - | chr4_3:62827747-62827766 | Msa0654610:intron | 35.0% | |
| ATACTGGATGGAATACAAAC+AGG | - | chr4_3:62827763-62827782 | Msa0654610:intron | 35.0% | |
| TACTGGATGGAATACAAACA+GGG | - | chr4_3:62827764-62827783 | Msa0654610:intron | 35.0% | |
| GTATTGAGGACAAAAAGTCA+TGG | - | chr4_3:62827788-62827807 | Msa0654610:intron | 35.0% | |
| GTCCAAGTAGATTGAGAAAT+TGG | - | chr4_3:62827814-62827833 | Msa0654610:intron | 35.0% | |
| TGCCAATTTCTCAATCTACT+TGG | + | chr4_3:62827819-62827838 | None:intergenic | 35.0% | |
| GATTTCTGTTGCAAACATAC+AGG | - | chr4_3:62827902-62827921 | Msa0654610:intron | 35.0% | |
| CAATAAAACTCTGAACATGC+CGG | - | chr4_3:62827953-62827972 | Msa0654610:intron | 35.0% | |
| GTTTGAATGGAGGTTGTTGT+AGG | + | chr4_3:62824817-62824836 | None:intergenic | 40.0% | |
| CTGCTACTAAGTTTGAATGG+AGG | + | chr4_3:62824827-62824846 | None:intergenic | 40.0% | |
| GCAGCTTTCACACAATAACA+AGG | - | chr4_3:62824843-62824862 | Msa0654610:three_prime_UTR | 40.0% | |
| ! | TTTACGAAATCATGGTGACG+TGG | - | chr4_3:62824942-62824961 | Msa0654610:three_prime_UTR | 40.0% |
| TATGGGAAGCTGACATCAAT+TGG | - | chr4_3:62825273-62825292 | Msa0654610:intron | 40.0% | |
| ATGGGAAGCTGACATCAATT+GGG | - | chr4_3:62825274-62825293 | Msa0654610:intron | 40.0% | |
| CAATGTTTCCATAGCGAATG+AGG | + | chr4_3:62825374-62825393 | None:intergenic | 40.0% | |
| TGGAAACATTGAGATAAGCC+CGG | - | chr4_3:62825383-62825402 | Msa0654610:CDS | 40.0% | |
| TAGTTTATGATACCAGCAGC+CGG | + | chr4_3:62825405-62825424 | None:intergenic | 40.0% | |
| GCTGCTGGTATCATAAACTA+TGG | - | chr4_3:62825405-62825424 | Msa0654610:intron | 40.0% | |
| GTTGAAATACCCTTGTACGA+TGG | - | chr4_3:62825456-62825475 | Msa0654610:intron | 40.0% | |
| AATGCTCTACGCATGAAGAT+GGG | - | chr4_3:62825997-62826016 | Msa0654610:intron | 40.0% | |
| TCAACAAACTGCTCAACTGA+TGG | + | chr4_3:62826048-62826067 | None:intergenic | 40.0% | |
| CAGTTCTTGCCAATAAACGT+TGG | - | chr4_3:62826082-62826101 | Msa0654610:intron | 40.0% | |
| AGACCACAAAGAGAGATAAG+AGG | + | chr4_3:62826118-62826137 | None:intergenic | 40.0% | |
| AGTCTAATCAGCTTCATGCA+TGG | - | chr4_3:62826142-62826161 | Msa0654610:CDS | 40.0% | |
| !! | TCATGCATGGTTTTACGTTG+CGG | - | chr4_3:62826155-62826174 | Msa0654610:CDS | 40.0% |
| GACAGATGCAGCTTCAATTT+CGG | - | chr4_3:62826223-62826242 | Msa0654610:intron | 40.0% | |
| !!! | AGTTTTTGGCGATCTCCAAA+AGG | + | chr4_3:62826261-62826280 | None:intergenic | 40.0% |
| ! | AGGGCCACAACATAAGTTTT+TGG | + | chr4_3:62826275-62826294 | None:intergenic | 40.0% |
| TTATCTTAGGCCTTTGCTGA+TGG | - | chr4_3:62826427-62826446 | Msa0654610:CDS | 40.0% | |
| TATCTTAGGCCTTTGCTGAT+GGG | - | chr4_3:62826428-62826447 | Msa0654610:CDS | 40.0% | |
| AGAAATGTGTACTCAGGTGA+TGG | + | chr4_3:62826479-62826498 | None:intergenic | 40.0% | |
| ! | GAGTGTTACTAATTATGCCC+CGG | - | chr4_3:62826736-62826755 | Msa0654610:intron | 40.0% |
| ATCACTATTGCCATGCATAC+CGG | + | chr4_3:62826758-62826777 | None:intergenic | 40.0% | |
| ! | CTTTTCACAAGTCACAACCA+AGG | + | chr4_3:62826847-62826866 | None:intergenic | 40.0% |
| GTAACTGAAGCAAAAGCCAA+TGG | - | chr4_3:62827002-62827021 | Msa0654610:intron | 40.0% | |
| TTGTTCTTGGATTCAGCAAC+TGG | - | chr4_3:62827038-62827057 | Msa0654610:intron | 40.0% | |
| ! | ATTTTCACTCCGGCAATAGA+TGG | - | chr4_3:62827251-62827270 | Msa0654610:intron | 40.0% |
| ATAGATGGATCTATTCTGCC+TGG | - | chr4_3:62827266-62827285 | Msa0654610:intron | 40.0% | |
| TAGATGGATCTATTCTGCCT+GGG | - | chr4_3:62827267-62827286 | Msa0654610:intron | 40.0% | |
| ATCAATGGCGATGTCTATGA+TGG | + | chr4_3:62827306-62827325 | None:intergenic | 40.0% | |
| ! | CATAGACATCGCCATTGATT+TGG | - | chr4_3:62827307-62827326 | Msa0654610:intron | 40.0% |
| !! | CGCCATTGATTTGGGTTATA+AGG | - | chr4_3:62827316-62827335 | Msa0654610:intron | 40.0% |
| CATAGAACGTTCCATATCAG+TGG | - | chr4_3:62827458-62827477 | Msa0654610:CDS | 40.0% | |
| ACGTTGTCTGAAAAACTACG+AGG | - | chr4_3:62827739-62827758 | Msa0654610:intron | 40.0% | |
| AAACTACGAGGAATACTGGA+TGG | - | chr4_3:62827751-62827770 | Msa0654610:intron | 40.0% | |
| AATACAAACAGGGCGTATTG+AGG | - | chr4_3:62827774-62827793 | Msa0654610:intron | 40.0% | |
| TGTTGCAAACATACAGGTAG+AGG | - | chr4_3:62827908-62827927 | Msa0654610:intron | 40.0% | |
| AGTTTATGATACCAGCAGCC+GGG | + | chr4_3:62825404-62825423 | None:intergenic | 45.0% | |
| GGTTGCGGTTATTGTTACAC+TGG | - | chr4_3:62825490-62825509 | Msa0654610:intron | 45.0% | |
| GACTGATGCAGTCAAAACTG+CGG | - | chr4_3:62825533-62825552 | Msa0654610:intron | 45.0% | |
| CAAGTTCTCAGTTGTTGCAG+TGG | + | chr4_3:62825717-62825736 | None:intergenic | 45.0% | |
| AGTAAACTTGGGGGATACCA+TGG | - | chr4_3:62825767-62825786 | Msa0654610:CDS | 45.0% | |
| GTAAACTTGGGGGATACCAT+GGG | - | chr4_3:62825768-62825787 | Msa0654610:CDS | 45.0% | |
| TAGATCCGCCACTGGATATA+GGG | - | chr4_3:62825799-62825818 | Msa0654610:CDS | 45.0% | |
| CAAACACACCCTATATCCAG+TGG | + | chr4_3:62825810-62825829 | None:intergenic | 45.0% | |
| AAGAAGGATTCGCCCATCTT+CGG | + | chr4_3:62825962-62825981 | None:intergenic | 45.0% | |
| ! | AATCCTTCTTTTCCGACCAG+AGG | - | chr4_3:62825972-62825991 | Msa0654610:intron | 45.0% |
| GAATGCTCTACGCATGAAGA+TGG | - | chr4_3:62825996-62826015 | Msa0654610:intron | 45.0% | |
| ATGCTCTACGCATGAAGATG+GGG | - | chr4_3:62825998-62826017 | Msa0654610:intron | 45.0% | |
| ! | AACTGCTCAACTGATGGTGA+TGG | + | chr4_3:62826042-62826061 | None:intergenic | 45.0% |
| ! | CGGTTGCGATTTTCACCTTT+TGG | - | chr4_3:62826243-62826262 | Msa0654610:intron | 45.0% |
| TTATGTTGTGGCCCTAACAG+TGG | - | chr4_3:62826280-62826299 | Msa0654610:intron | 45.0% | |
| GGAAAGGGACGCTTTATCTT+AGG | - | chr4_3:62826414-62826433 | Msa0654610:CDS | 45.0% | |
| CTCATTTATTGCTCCCCTGT+TGG | - | chr4_3:62826497-62826516 | Msa0654610:intron | 45.0% | |
| TAATTATGCCCCGGTATGCA+TGG | - | chr4_3:62826745-62826764 | Msa0654610:intron | 45.0% | |
| TCACTATTGCCATGCATACC+GGG | + | chr4_3:62826757-62826776 | None:intergenic | 45.0% | |
| AGATGGATCTATTCTGCCTG+GGG | - | chr4_3:62827268-62827287 | Msa0654610:intron | 45.0% | |
| AGAACGTTCCATATCAGTGG+AGG | - | chr4_3:62827461-62827480 | Msa0654610:CDS | 45.0% | |
| GTGTGTGAATCTGCTTTGTG+TGG | - | chr4_3:62828034-62828053 | Msa0654610:five_prime_UTR | 45.0% | |
| !!! | TTTTTTAAAATTAAAAAAGA+AGG | + | chr4_3:62826624-62826643 | None:intergenic | 5.0% |
| !! | TAAAAAAATAAAAATTTAAC+AGG | - | chr4_3:62826637-62826656 | Msa0654610:intron | 5.0% |
| !! | AAAAAAATAAAAATTTAACA+GGG | - | chr4_3:62826638-62826657 | Msa0654610:intron | 5.0% |
| !! | AAAATATATAATATTCAATT+TGG | + | chr4_3:62826824-62826843 | None:intergenic | 5.0% |
| CAAGGATCCCTCATTCGCTA+TGG | - | chr4_3:62825363-62825382 | Msa0654610:CDS | 50.0% | |
| !! | ATCCAGTGGCGGATCTACTT+GGG | + | chr4_3:62825796-62825815 | None:intergenic | 50.0% |
| !! | TATCCAGTGGCGGATCTACT+TGG | + | chr4_3:62825797-62825816 | None:intergenic | 50.0% |
| GTAGATCCGCCACTGGATAT+AGG | - | chr4_3:62825798-62825817 | Msa0654610:CDS | 50.0% | |
| ACACACCCTATATCCAGTGG+CGG | + | chr4_3:62825807-62825826 | None:intergenic | 50.0% | |
| TCTCCTCTGGTCGGAAAAGA+AGG | + | chr4_3:62825978-62825997 | None:intergenic | 50.0% | |
| ! | GTAGAGCATTCTCCTCTGGT+CGG | + | chr4_3:62825987-62826006 | None:intergenic | 50.0% |
| ! | ATGCGTAGAGCATTCTCCTC+TGG | + | chr4_3:62825991-62826010 | None:intergenic | 50.0% |
| TGCTCTACGCATGAAGATGG+GGG | - | chr4_3:62825999-62826018 | Msa0654610:intron | 50.0% | |
| GCGGTTCAGAACCACTGTTA+GGG | + | chr4_3:62826294-62826313 | None:intergenic | 50.0% | |
| TGCGGTTCAGAACCACTGTT+AGG | + | chr4_3:62826295-62826314 | None:intergenic | 50.0% | |
| TTGAAACAGGTACCTCCTCC+AGG | - | chr4_3:62826392-62826411 | Msa0654610:CDS | 50.0% | |
| TGAAACAGGTACCTCCTCCA+GGG | - | chr4_3:62826393-62826412 | Msa0654610:CDS | 50.0% | |
| ! | AGATAAAGCGTCCCTTTCCC+TGG | + | chr4_3:62826413-62826432 | None:intergenic | 50.0% |
| ATGGGAACAGGAGCTGCATT+AGG | - | chr4_3:62826446-62826465 | Msa0654610:CDS | 50.0% | |
| CTCGTGGTACTTTCCAACAG+GGG | + | chr4_3:62826513-62826532 | None:intergenic | 50.0% | |
| CCTCGTGGTACTTTCCAACA+GGG | + | chr4_3:62826514-62826533 | None:intergenic | 50.0% | |
| ACCTCGTGGTACTTTCCAAC+AGG | + | chr4_3:62826515-62826534 | None:intergenic | 50.0% | |
| CATCGATCAATAGCTGGCAG+TGG | - | chr4_3:62826695-62826714 | Msa0654610:intron | 50.0% | |
| CACTATTGCCATGCATACCG+GGG | + | chr4_3:62826756-62826775 | None:intergenic | 50.0% | |
| ! | ATGGATTTTCGTGTGACCCC+AGG | + | chr4_3:62827287-62827306 | None:intergenic | 50.0% |
| ! | GCTGATGAAGTGTTCTGCAC+AGG | - | chr4_3:62827495-62827514 | Msa0654610:CDS | 50.0% |
| ATTGAGATAAGCCCGGCTGC+TGG | - | chr4_3:62825390-62825409 | Msa0654610:CDS | 55.0% | |
| !! | TCCAGTGGCGGATCTACTTG+GGG | + | chr4_3:62825795-62825814 | None:intergenic | 55.0% |
| GCATGAAGATGGGGGCTGAT+AGG | - | chr4_3:62826007-62826026 | Msa0654610:intron | 55.0% | |
| AGGTACCTCCTCCAGGGAAA+GGG | - | chr4_3:62826399-62826418 | Msa0654610:CDS | 55.0% | |
| ! | TAAAGCGTCCCTTTCCCTGG+AGG | + | chr4_3:62826410-62826429 | None:intergenic | 55.0% |
| AGGCCTTTGCTGATGGGAAC+AGG | - | chr4_3:62826434-62826453 | Msa0654610:CDS | 55.0% | |
| GCTCCTGTTCCCATCAGCAA+AGG | + | chr4_3:62826440-62826459 | None:intergenic | 55.0% | |
| AACAGGAGCTGCATTAGGCC+CGG | - | chr4_3:62826451-62826470 | Msa0654610:CDS | 55.0% | |
| !! | TGTACTCAGGTGATGGAGCC+GGG | + | chr4_3:62826472-62826491 | None:intergenic | 55.0% |
| !! | GTGTACTCAGGTGATGGAGC+CGG | + | chr4_3:62826473-62826492 | None:intergenic | 55.0% |
| !! | CCCTGTTGGAAAGTACCACG+AGG | - | chr4_3:62826511-62826530 | Msa0654610:intron | 55.0% |
| AAGTACCACGAGGTCAGCCA+TGG | - | chr4_3:62826521-62826540 | Msa0654610:intron | 55.0% | |
| CAAATCCATGGCTGACCTCG+TGG | + | chr4_3:62826529-62826548 | None:intergenic | 55.0% | |
| CGATCAATAGCTGGCAGTGG+TGG | - | chr4_3:62826698-62826717 | Msa0654610:intron | 55.0% | |
| ! | ATAGCTGGCAGTGGTGGAAC+AGG | - | chr4_3:62826704-62826723 | Msa0654610:intron | 55.0% |
| GTTCTGCACAGGAACTGCAG+TGG | - | chr4_3:62827506-62827525 | Msa0654610:CDS | 55.0% | |
| CGGATCTACTTGGGGACCCA+TGG | + | chr4_3:62825787-62825806 | None:intergenic | 60.0% | |
| TCCCCAAGTAGATCCGCCAC+TGG | - | chr4_3:62825791-62825810 | Msa0654610:CDS | 60.0% | |
| CAGGTACCTCCTCCAGGGAA+AGG | - | chr4_3:62826398-62826417 | Msa0654610:CDS | 60.0% | |
| AGCGTCCCTTTCCCTGGAGG+AGG | + | chr4_3:62826407-62826426 | None:intergenic | 65.0% | |
| ! | GCTGGCAGTGGTGGAACAGG+AGG | - | chr4_3:62826707-62826726 | Msa0654610:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 62824773 | 62828099 | 62824773 | ID=Msa0654610;Name=Msa0654610 |
| chr4_3 | mRNA | 62824773 | 62828099 | 62824773 | ID=Msa0654610-mRNA-1;Parent=Msa0654610;Name=Msa0654610-mRNA-1;_AED=0.11;_eAED=0.11;_QI=156|1|1|1|0.77|0.7|10|271|318 |
| chr4_3 | exon | 62824773 | 62825158 | 62824773 | ID=Msa0654610-mRNA-1:exon:17597;Parent=Msa0654610-mRNA-1 |
| chr4_3 | exon | 62825304 | 62825416 | 62825304 | ID=Msa0654610-mRNA-1:exon:17596;Parent=Msa0654610-mRNA-1 |
| chr4_3 | exon | 62825535 | 62825630 | 62825535 | ID=Msa0654610-mRNA-1:exon:17595;Parent=Msa0654610-mRNA-1 |
| chr4_3 | exon | 62825766 | 62825882 | 62825766 | ID=Msa0654610-mRNA-1:exon:17594;Parent=Msa0654610-mRNA-1 |
| chr4_3 | exon | 62826115 | 62826213 | 62826115 | ID=Msa0654610-mRNA-1:exon:17593;Parent=Msa0654610-mRNA-1 |
| chr4_3 | exon | 62826340 | 62826471 | 62826340 | ID=Msa0654610-mRNA-1:exon:17592;Parent=Msa0654610-mRNA-1 |
| chr4_3 | exon | 62826768 | 62826944 | 62826768 | ID=Msa0654610-mRNA-1:exon:17591;Parent=Msa0654610-mRNA-1 |
| chr4_3 | exon | 62827441 | 62827593 | 62827441 | ID=Msa0654610-mRNA-1:exon:17590;Parent=Msa0654610-mRNA-1 |
| chr4_3 | exon | 62827640 | 62827658 | 62827640 | ID=Msa0654610-mRNA-1:exon:17589;Parent=Msa0654610-mRNA-1 |
| chr4_3 | exon | 62828008 | 62828099 | 62828008 | ID=Msa0654610-mRNA-1:exon:17588;Parent=Msa0654610-mRNA-1 |
| chr4_3 | five_prime_UTR | 62828008 | 62828099 | 62828008 | ID=Msa0654610-mRNA-1:five_prime_utr;Parent=Msa0654610-mRNA-1 |
| chr4_3 | five_prime_UTR | 62827640 | 62827658 | 62827640 | ID=Msa0654610-mRNA-1:five_prime_utr;Parent=Msa0654610-mRNA-1 |
| chr4_3 | five_prime_UTR | 62827549 | 62827593 | 62827549 | ID=Msa0654610-mRNA-1:five_prime_utr;Parent=Msa0654610-mRNA-1 |
| chr4_3 | CDS | 62827441 | 62827548 | 62827441 | ID=Msa0654610-mRNA-1:cds;Parent=Msa0654610-mRNA-1 |
| chr4_3 | CDS | 62826768 | 62826944 | 62826768 | ID=Msa0654610-mRNA-1:cds;Parent=Msa0654610-mRNA-1 |
| chr4_3 | CDS | 62826340 | 62826471 | 62826340 | ID=Msa0654610-mRNA-1:cds;Parent=Msa0654610-mRNA-1 |
| chr4_3 | CDS | 62826115 | 62826213 | 62826115 | ID=Msa0654610-mRNA-1:cds;Parent=Msa0654610-mRNA-1 |
| chr4_3 | CDS | 62825766 | 62825882 | 62825766 | ID=Msa0654610-mRNA-1:cds;Parent=Msa0654610-mRNA-1 |
| chr4_3 | CDS | 62825535 | 62825630 | 62825535 | ID=Msa0654610-mRNA-1:cds;Parent=Msa0654610-mRNA-1 |
| chr4_3 | CDS | 62825304 | 62825416 | 62825304 | ID=Msa0654610-mRNA-1:cds;Parent=Msa0654610-mRNA-1 |
| chr4_3 | CDS | 62825044 | 62825158 | 62825044 | ID=Msa0654610-mRNA-1:cds;Parent=Msa0654610-mRNA-1 |
| chr4_3 | three_prime_UTR | 62824773 | 62825043 | 62824773 | ID=Msa0654610-mRNA-1:three_prime_utr;Parent=Msa0654610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
